EMLSAT00000008675, EMLSAT00000008675-704522 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008675
Unique NameEMLSAT00000008675-704522
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s537supercontigLSalAtl2s537:354031..354768 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008675 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008675EMLSAG00000008675-691441Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000038491EMLSAE00000038491-747419Lepeophtheirus salmonisexon
EMLSAE00000038492EMLSAE00000038492-747420Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776778auto776778Lepeophtheirus salmonispolypeptide
EMLSAP00000008675EMLSAP00000008675Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008675

>EMLSAP00000008675 ID=EMLSAP00000008675|Name=EMLSAP00000008675|organism=Lepeophtheirus salmonis|type=polypeptide|length=220bp
MKPCMFNCSCFLVVLAILLSSHHGVEAGNGRHSDRNHYGDLKVXEDILST
FQRASHRKLEKEEEFRHFKEQEEQXAKKIESRINKLVSPKLDQMFKITSE
KIVEKIIRPVINAPERLRATSFGKKDYESSSRLILSNFGSIFKSEYVSIF
LAQQWFHLITGTGCWILAAGLYHTLGNDNMXRSAPQEPWETLIPNSNTLT
FIFRELADATEKYSLHHDEL
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mRNA from alignment at LSalAtl2s537:354031..354768-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008675-704522 ID=EMLSAT00000008675-704522|Name=EMLSAT00000008675|organism=Lepeophtheirus salmonis|type=mRNA|length=738bp|location=Sequence derived from alignment at LSalAtl2s537:354031..354768- (Lepeophtheirus salmonis)
ATGAAACCCTGTATGTTTAATTGCTCATGTTTCCTAGTTGTTCTTGCAAT
CCTACTCTCTTCTCATCATGGCGTAGAGGCTGGAAATGGTCGTCATTCAG
ATAGGGTAATGATTCAAATAGTGACAAATATCTTGAAGTTTATTTCTTAT
TATTTTTTTTTTCAAACCATTCCATGACAGAATCATTATGGAGATTTGAA
AGTAAAKGAGGACATTCTATCCACCTTTCAAAGAGCATCTCATCGCAAAT
TAGAAAAAGAAGAAGAGTTCCGACATTTCAAAGAGCAAGAGGAACAAMCA
GCCAAGAAAATAGAATCTCGTATCAATAAACTTGTATCTCCAAAATTAGA
TCAAATGTTTAAAATTACGAGTGAGAAAATTGTTGAGAAAATCATTCGTC
CTGTCATCAATGCCCCAGAGCGACTAAGAGCCACTTCTTTCGGGAAAAAG
GACTACGAGTCTTCGAGTCGTCTCATTCTTTCCAATTTTGGATCTATTTT
CAAATCGGAATATGTTTCTATTTTCTTAGCACAGCAGTGGTTTCACCTTA
TCACGGGAACTGGGTGTTGGATACTAGCTGCTGGGTTATATCATACATTA
GGAAATGACAACATGGKACGTTCAGCACCACAAGAGCCATGGGAAACCCT
CATTCCGAACTCAAATACCCTTACTTTTATATTTCGTGAGCTTGCTGACG
CTACAGAGAAATATAGCCTTCATCATGATGAATTATGA
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