EMLSAT00000011172, EMLSAT00000011172-707019 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011172
Unique NameEMLSAT00000011172-707019
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s75supercontigLSalAtl2s75:559094..560375 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011172 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011172EMLSAG00000011172-693938Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000049940EMLSAE00000049940-758868Lepeophtheirus salmonisexon
EMLSAE00000049941EMLSAE00000049941-758869Lepeophtheirus salmonisexon
EMLSAE00000049942EMLSAE00000049942-758870Lepeophtheirus salmonisexon
EMLSAE00000049943EMLSAE00000049943-758871Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778582auto778582Lepeophtheirus salmonispolypeptide
EMLSAP00000011172EMLSAP00000011172Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011172

>EMLSAP00000011172 ID=EMLSAP00000011172|Name=EMLSAP00000011172|organism=Lepeophtheirus salmonis|type=polypeptide|length=355bp
MSPNSSSLCYCADNCSDMVCGRXRGVIRDPFEKAYKVGEVLGKGGFGVVY
AGIRVRDGKQVAIKHVSRAKVTDWDIINGRRIPLELRLLKTVQSVSGVIR
LLDFYERIDSFVYIMEKPTPCKDLFEFITDKGVLEESLARNFFRQVVRTI
VACHRKGVIHRDIKDENLLVDLKTLELKLIDFGSGAHIKSGAYTDFDGTR
MYAPPEWIRSSCYHGNTATVWSLGILLYDMVCGDIPFENDEQICSAEIKF
RRPLSSACQDLILRCLRRRPYDRIQLLEILRHPWLEAKESSSIVLPNPPP
PRPEPVVVXRPQQLVGSGVDVVGGGVVDVGSSSLSSLSLSSGSSTMSLHL
CQRSV
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mRNA from alignment at LSalAtl2s75:559094..560375-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011172-707019 ID=EMLSAT00000011172-707019|Name=EMLSAT00000011172|organism=Lepeophtheirus salmonis|type=mRNA|length=1282bp|location=Sequence derived from alignment at LSalAtl2s75:559094..560375- (Lepeophtheirus salmonis)
ATGTCTCCGAATTCTTCCTCACTGTGTTATTGTGCAGATAATTGTTCAGG
TGAGTGACATGACTCTACGCGGCTATTTTTGACTCTAAGAAACTGTTATT
ATGGTTTTAATATCTATTGTCCTTTTATAGATATGGTTTGTGGAAGGAGM
CGTGGMGTCATTCGAGATCCCTTTGAGAAAGCCTACAAAGTGGGTGAAGT
CCTTGGCAAAGGAGGATTTGGTGTTGTCTATGCAGGGATCCGAGTACGCG
ACGGAAAACAAGTTGCTATAAAACATGTGTCCAGAGCTAAAGTGACAGAC
TGGGATATTGTAAGTGAAAGCATCTCTTAAATTCACTTAATCACAGGGTT
TTAATATACTTTCTTTTTTAAAGATCAATGGGCGCCGCATTCCATTAGAA
CTTCGTCTTCTCAAGACCGTCCAATCTGTCAGTGGAGTCATTCGCCTTTT
AGACTTTTACGAGCGTATCGATTCATTTGTATATATCATGGAAAAACCAA
CTCCATGCAAGGACTTGTTTGAATTCATCACGGATAAAGGAGTTCTGGAA
GAGTCTCTTGCTCGAAACTTTTTCCGCCAAGTAGTTCGCACTATTGTGGC
CTGTCATCGAAAGGGCGTCATTCACAGAGACATCAAGGATGAGAATCTAT
TGGTGGATTTAAAAACGCTTGAACTTAAATTGATCGACTTCGGATCCGGA
GCGCATATCAAATCTGGAGCCTATACGGATTTTGATGGTAAGCCACTTTT
TTTTGTTGTACTCGTGTGTGAAGTTTTCCTAACCATTTATCTCCATGTTC
TTTCAGGAACCCGCATGTACGCTCCACCCGAGTGGATTCGTAGTTCTTGC
TATCACGGAAACACAGCTACAGTTTGGTCCCTTGGGATCCTTCTTTACGA
TATGGTATGTGGAGACATTCCCTTTGAGAACGATGAACAGATCTGTTCAG
CTGAAATCAAGTTCCGACGKCCCCTCTCCTCAGCCTGCCAAGATTTGATA
CTTCGTTGTCTTCGGCGAAGACCCTATGATCGCATTCAACTTCTTGAAAT
CCTACGTCATCCCTGGTTGGAAGCCAAGGAATCCTCTTCCATCGTTCTAC
CCAACCCTCCTCCACCACGCCCAGAGCCCGTTGTTGTGGAKCGGCCACAA
CAACTTGTTGGCAGTGGTGTTGATGTTGTAGGTGGTGGTGTTGTTGATGT
TGGATCCTCTTCGCTCTCTTCTTTGAGTTTATCATCAGGGAGTTCGACAA
TGAGTCTACATCTTTGTCAGCGGAGTGTGTAA
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