EMLSAT00000011487, EMLSAT00000011487-707334 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000011487
Unique Name	EMLSAT00000011487-707334
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s794	supercontig	LSalAtl2s794:253809..261120 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000011487 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000011487	EMLSAG00000011487-694253	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000051370	EMLSAE00000051370-760298	Lepeophtheirus salmonis	exon
EMLSAE00000051371	EMLSAE00000051371-760299	Lepeophtheirus salmonis	exon
EMLSAE00000051372	EMLSAE00000051372-760300	Lepeophtheirus salmonis	exon
EMLSAE00000051373	EMLSAE00000051373-760301	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto775463	auto775463	Lepeophtheirus salmonis	polypeptide
EMLSAP00000011487	EMLSAP00000011487	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s794:253809..261120-

protein sequence of EMLSAP00000011487

>EMLSAP00000011487 ID=EMLSAP00000011487|Name=EMLSAP00000011487|organism=Lepeophtheirus salmonis|type=polypeptide|length=2358bp
MESLMDSEDFPGRLVHEAALWDDAELLEALLSGGXEWXGLKGRDSWGRTA
LHAAATTEGSRCLRLXLRRGCLLDSRCGARGDSRSALHMASEYGYIENVR
VLVEXGSNLSLRDALGLTALDLAEKGDHLECMAVLSRAAHVQEETRLSRL
QLLHDACVSGDLQTMEEDLFQLQSSHGGSNTLVFTACEYGHIQILSFLLE
KGARPTIHPVTQYSPLYIASLNGKIDIVQVLLYKFPHLILQLTVEGRSPI
HAAALNGHVAVLELLLKFKYPNNLLRQIREKTGQWEFYLPFDLNQRDKVG
YTCLYLATSSSNSKVVNSLLQFRVQASKRIITSPEKVDSEPSSIEKSSLK
SYNSEGSVVTSSDTLISPIEVDLYCGVETSLHCAVKKKDLKIANLLLAVG
ADPNNVILNSELGTFNCLVEACRNRDFSMIDTLLKHSAKDDNCEALNIVL
NNDVIVCKLLSHKAIQDTEDIINYKNFIVTPVCSVRIDWDNQGGQLDYIK
DHWISEASLRYNPSLRLTPNYQDVSYQVITRLDLSSNKLREMPQSVLKMV
NLKFLSLAANKLESLPDYDGMDNKLAKTYNCPRLEEIQLQDNRLDTLPAA
IFSLESLITLDASNNKLQYLPQDIWKSPKLKELNLSFNLLNDLQIDCPLG
TTDNHRCCTLDNDLCLSVLESFSNDKKVSHTSICNDMMESKELKRCNLWS
QSLEICERLSKRVNSELYVKDEFSSMQVLNLAHNSFSVIPKCISCFCPSL
SRLNLSYNALTNFGAICCYPSSLKYLDLSHNQINSWPSHGPNSEHKFCYK
RLLSNKCLKVGSCPHRQHDKMTNLRTLILSANKLDKLQVRLGSKVFFPNL
SMLDVSNNNISQISKSILELNNLSVLNLSFNPSLTDLPHQMGLLCKLWNL
DTKGCNLIEPLGSMTRSKRCKTSDIVSYLRSMLENSRSYARMKLMVVGIQ
GIGKTTLLELLRQEGGSFRRKPVEHWAKRMGNRNMNMKKGDISLSTVGVD
IGDWTFEKRGSTRGPIVFRTWDFGGQTEYYSTHQYFLSRRSLYLVVWNIV
DGEKGMSEIEQWLINIQARAPNSPVIIVGTHFDVIKENPTSSYFEYLQSC
IRDKFINVTDPEKSGLPKVLDCVEVSCRTRHNIKLLANLIYDVSFNLKSP
GSNVRLLEQKIPATFLALEEIVNYLASDLKNRGLDPVLSQEKFEESVKLE
LSSKYKLSFRDLGELSQATKFLHENGLLLHYDDATLRDLYFLDPQWLCDL
LSHVVTIREINPFARNGLMKLDDLKLVFKSSAAISLTAKSYVVNLLNKFE
IALTWDSSTLLIPSLLPTEAQMKNGHHLIVSIPVRSRGLRGRKAFDNIXS
SXSHSVPSRMLLKASNISLPQRLKQRNQGRKSLSSFEVTHRSEIDHRIQR
LFLMSYFPSGFWSRLLSRILADDNVVEIVRSYFVIPDDWYTDTLLSKIFM
ENKPEWTCWQSGLELRYLETTLFSLKQIFHESFNPFFDYHSMRMMIYQED
IWSPLDKSSSSILELSLPQDTVLIKKTIKNESKEEIGYTMSVLDLNPKSV
CQLLALAVEHIDTLLEDWYPSLGTRFLHTSEGRMLITRIVPCPRCLTQFN
EINNNVNQPSNVLSLDDGINHKKKHIKKVVKSNNSPPIYVFPIEECILMA
FESRNPRCFIHGDLLLGQIAPDIIFLDLEDRLRISNENIKRGKLIGQGAF
GFVFISTLTSRGINEQQKVAVKILQPTHPGYNAKESTSAAYEISISKWER
DPIQYAAKAYCSARQEISILIHLKHPNIVPLIGVCIKPLSIILELAPKGA
LDKKLEYYLHSDCQIPIKVVQLIVLQISRALEYLHQLHIIYRDLKSENVL
VWKFPEPFSKLSNEVHVKLADYGISXPTLPTGTKGFGGTEGFMAPEIVKY
NGEEEYTEKVDCFSFGMFIYELITLHQPFSGYETIKELILEGIRPPISVE
ETKFPTNILDLMISCWSQQPRHRPSTSQLVSIISAPEFINLIDAISIGTT
STSAQIVTPRKEVWLSIDSAFDQHSSLNLLEFSHEKWIQHCIFKTKFTQS
ITALCLIEEAVWAGDNIGLIHSYSLNNYSKLFTYKMDPDYGNEPSPVRSI
HYLQEMQRACIALHNGRMFLCDSNIIPSCKVGGEGFFVMTELGSSSCIHS
IASINLNPRSWEIWCGESHGSVSIFSFIDGVVTSQQIINHNNPIVENLLV
LQVLTEGTYIWTSLYPGFHVYQWNTTTKSVINRLDCSKLIPVSESLRTIS
IEECFNPGRCQITSINLLESKLYVGTNWGCVIIAESINMQPITVFRPYSD
QVQAIIPIPEHGLLVTLGKGYRPLIPRYASGCEENDSEDENNNMFALLWT
ANGWLMNN

mRNA from alignment at LSalAtl2s794:253809..261120-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000011487-707334 ID=EMLSAT00000011487-707334|Name=EMLSAT00000011487|organism=Lepeophtheirus salmonis|type=mRNA|length=7312bp|location=Sequence derived from alignment at LSalAtl2s794:253809..261120- (Lepeophtheirus salmonis)
ATGGAATCTTTAATGGACTCTGAGGACTTTCCAGGAAGGTATTTAGTTTA
GAGGCTGGAGTTGGCGAAGGAATCTTGTGAGTTGTTTCTCCCGGATTCCT
TCCCGGATTGCTTTGGCAGATGATGTCCACCTGTTTTTGATTTTAGACTT
GTTCATGAGGCCGCCCTTTGGGACGATGCAGAGCTTCTGGAGGCTCTTTT
GAGTGGTGGGAGMGAGTGGMGTGGGTTGAAGGGTCGTGACTCGTGGGGTC
GAACGGCTCTCCACGCAGCGGCCACGACTGAGGGATCCCGGTAAGTGGGT
TATCGGTTGTTTGCTTGAGTAGCGGGTTGAGTGTCTTGTTCTCCAGATGC
CTGCGCCTCTMGCTCAGGAGGGGCTGCCTCCTGGACTCTCGCTGCGGCGC
CCGGGGGGACTCGCGCTCCGCACTGCACATGGCTTCAGAGTACGGCTACA
TTGAGAACGTCCGGGTCCTTGTGGAGGSAGGGAGCAACTTGAGCCTCAGG
GACGCTCTGGGACTGACTGCTCTGGACCTGGCGGAGAAGGGGGACCATTT
GGAATGCATGGCAGTCTTGAGCAGAGCTGCACATGTCCAGGAGGAAACTC
GACTTTCCAGACTCCAACTCTTGCATGACGCATGTGTGAGCGGAGATTTG
CAAACTATGGAAGAGGACCTCTTCCAACTCCAGTCTTCTCACGGGGGGAG
CAACACTCTTGTATTTACAGGTACATTCTCCGACTCATTATTTCTTTCAT
TTCCTTTGATTTTCTTTGTCTCGTCTATTTACCGCTTATAGCTTGTGAGT
ATGGACATATACAAATTCTTAGTTTCCTATTAGAAAAAGGAGCAAGACCC
ACAATTCATCCAGTCACTCAATATTCTCCCCTCTACATTGCCTCCCTAAA
TGGCAAAATAGATATTGTACAAGTTCTTCTTTATAAATTTCCACACTTGA
TTTTACAATTAACTGTGGAGGGAAGATCGCCAATCCACGCTGCTGCTCTA
AATGGTCATGTAGCTGTACTGGAATTACTTCTAAAATTTAAGTACCCAAA
TAACTTACTTCGTCAGATAAGAGAGAAAACAGGACAATGGGAATTTTATC
TACCTTTTGACCTTAATCAGAGAGACAAAGTTGGTTATACTTGTCTATAC
CTTGCTACATCGTCTAGTAATTCAAAAGTTGTAAATTCTTTACTTCAATT
TCGCGTGCAAGCATCAAAAAGAATTATCACATCCCCGGAAAAAGTTGATT
CCGAACCCTCATCTATTGAAAAGTCAAGCTTAAAATCATATAATAGTGAG
GGTTCCGTTGTTACAAGTTCGGATACTTTGATAAGTCCAATAGAAGTCGA
TTTGTATTGTGGCGTTGAAACATCACTTCATTGTGCCGTAAAAAAAAAAG
ATTTAAAAATTGCCAATCTATTATTAGCGGTTGGMGCCGATCCAAATAAT
GTAATACTCAATTCTGAACTTGGCACATTTAACTGCCTGGTTGAAGCATG
TCGAAACCGTGACTTTTCTATGATTGACACATTACTTAAGCATTCGGCTA
AAGATGATAACTGTGAAGCTCTTAATATCGTTTTGAATAATGATGTGATC
GTTTGCAAATTACTTTCTCATAAAGCTATTCAAGACACCGAAGATATAAT
TAATTATAAAAACTTTATTGTAACTCCAGTTTGTTCTGTTAGAATAGATT
GGGATAATCAGGGTGGCCAATTGGATTATATTAAAGATCATTGGATATCT
GAGGCATCATTGAGATATAATCCTTCACTAAGACTTACTCCCAACTACCA
AGATGTTTCATATCAAGTTATTACTCGTTTAGATCTGTCGAGTAATAAAT
TAAGGGAAATGCCACAATCCGTGCTAAAGATGGTTAATTTAAAATTTCTA
AGTCTAGCTGCCAATAAACTTGAAAGCCTTCCTGACTATGACGGCATGGA
CAATAAACTTGCGAAGACATATAATTGCCCGCGTTTGGAAGAAATCCAGT
TACAAGATAACCGTTTGGATACTCTACCAGCAGCTATTTTCTCCTTAGAA
TCTCTTATTACATTAGATGCCTCAAATAACAAACTACAATATTTACCCCA
AGATATTTGGAAAAGTCCTAAACTAAAAGAATTAAATTTATCATTTAATC
TACTCAATGATTTACAGATTGACTGTCCTCTTGGTACTACAGATAATCAC
AGATGTTGCACTTTAGATAACGATTTATGTTTATCTGTGCTTGAATCCTT
TAGTAATGATAAAAAAGTTTCACATACATCTATATGTAATGATATGATGG
AATCAAAGGAACTAAAGCGTTGTAATCTTTGGAGTCAGTCCCTTGAAATA
TGTGAAAGATTATCGAAAAGAGTTAATTCGGAGTTGTATGTAAAAGACGA
ATTTAGTTCTATGCAAGTTTTGAATTTAGCTCATAATTCCTTCTCTGTGA
TTCCGAAATGTATTTCCTGTTTTTGTCCAAGTTTAAGTCGCTTAAATTTA
TCCTACAATGCACTTACCAACTTTGGGGCAATATGTTGCTATCCTAGTTC
ACTTAAATATTTAGACTTATCACATAATCAAATCAATTCATGGCCATCAC
ATGGCCCTAACAGTGAGCATAAATTTTGTTATAAAAGATTATTAAGCAAT
AAGTGCTTGAAAGTAGGTTCATGTCCACATAGACAACATGATAAAATGAC
TAATTTGCGTACTCTTATTCTATCAGCCAACAAATTGGACAAACTACAAG
TTCGTTTAGGCTCTAAGGTATTTTTCCCCAATTTATCTATGTTGGATGTT
TCTAATAATAATATATCTCAAATTTCAAAAAGTATCCTTGAATTAAATAA
TCTTTCTGTCTTAAATCTGAGCTTTAACCCATCTCTGACAGATTTACCTC
ATCAGATGGGTTTGTTATGCAAATTATGGAATCTGGATACCAAGGGCTGT
AATCTGATTGAGCCACTCGGTTCTATGACTAGATCAAAGAGATGCAAAAC
TTCTGATATAGTTAGTTATCTTCGCTCTATGCTAGAAAATTCTCGATCTT
ATGCAAGAATGAAACTAATGGTCGTTGGAATTCAAGGAATTGGAAAGACT
ACCTTGTTAGAATTGTTAAGACAAGAAGGTGGTTCATTTAGACGAAAACC
TGTTGAACATTGGGCAAAACGTATGGGTAATCGAAATATGAATATGAAAA
AAGGTGATATTTCCCTATCCACTGTTGGAGTTGATATAGGTGATTGGACA
TTTGAAAAAAGAGGATCTACAAGAGGTCCAATTGTTTTTCGAACTTGGGA
TTTTGGAGGACAGACAGAATACTATTCTACTCATCAATATTTTTTATCAA
GGCGTAGTCTCTATTTAGTTGTATGGAATATTGTTGATGGTGAAAAAGGT
ATGAGTGAAATAGAACAATGGTTAATTAATATACAAGCTCGTGCTCCGAA
CAGTCCAGTTATTATCGTAGGMACACACTTTGACGTCATAAAAGAAAATC
CTACTTCATCATATTTTGAGTATTTACAATCATGTATACGTGACAAGTTT
ATAAATGTAACTGATCCTGAAAAAAGTGGTTTGCCAAAAGTCTTAGATTG
TGTTGAAGTAAGTTGCCGTACACGGCACAATATTAAACTACTGGCTAATT
TGATTTATGATGTATCTTTTAATTTGAAATCTCCAGGAAGTAATGTCCGT
TTATTAGAACAAAAAATACCTGCTACTTTCCTTGCGCTTGAAGAAATTGT
CAATTACCTGGCATCAGATTTAAAAAATCGGGGGTTGGACCCTGTTCTAT
CGCAAGAAAAATTTGAAGAATCAGTAAAACTAGAACTCTCTTCGAAATAC
AAATTATCTTTTCGAGATTTAGGTGAATTATCACAGGCTACTAAGTTTTT
ACATGAAAATGGTTTATTATTACATTATGACGATGCAACACTGAGGGATT
TATATTTTTTGGATCCTCAGTGGCTTTGTGATTTACTTTCCCATGTTGTA
ACCATTCGTGAAATAAATCCATTTGCCCGTAATGGGTTAATGAAGTTAGA
TGATTTAAAACTTGTGTTTAAATCTTCTGCAGCTATTAGTCTAACTGCCA
AGTCATATGTTGTTAATCTGTTAAACAAATTTGAAATTGCATTAACTTGG
GATAGTTCAACACTTCTTATTCCAAGTCTTTTACCTACGGAAGCTCAGAT
GAAAAATGGCCATCATTTAATAGTAAGTATTCCTGTGAGATCTCGCGGAT
TACGAGGGAGAAAGGCTTTTGATAACATTAKCTCCTCTCYAAGCCACTCT
GTTCCATCACGAATGTTATTAAAGGCATCCAATATATCATTACCTCAACG
ACTAAAACAACGAAATCAAGGCAGAAAGTCTTTGAGCAGTTTTGAAGTTA
CACACAGATCTGAAATCGATCATAGAATTCAGCGACTTTTCTTGATGTCG
TATTTCCCCTCTGGATTTTGGTCTAGATTGCTTTCACGGATACTAGCAGA
TGATAATGTTGTTGAAATTGTGAGGTCTTACTTTGTCATACCTGACGATT
GGTATACTGACACCTTACTCTCAAAAATATTTATGGAAAACAAACCAGAA
TGGACATGCTGGCAAAGCGGTCTTGAACTTCGATATTTAGAAACAACTCT
TTTCAGTCTTAAACAAATTTTCCATGAGTCATTCAATCCTTTCTTTGACT
ATCATTCCATGCGAATGATGATTTACCAGGAGGATATTTGGTCACCATTA
GATAAAAGTTCATCTTCTATTTTGGAATTGTCCTTGCCTCAAGATACCGT
ATTGATTAAAAAAACTATAAAAAATGAATCAAAAGAGGAGATAGGTTATA
CTATGTCTGTTCTTGATCTAAACCCTAAATCGGTTTGTCAATTACTGGCT
CTAGCTGTTGAACATATTGATACACTCTTGGAAGATTGGTATCCATCATT
AGGAACACGATTTTTGCATACTTCAGAGGGTAGGATGTTGATTACAAGGA
TAGTACCTTGTCCCAGATGTCTGACTCAATTTAATGAGATAAATAATAAT
GTGAATCAACCTTCCAATGTTTTGAGCCTTGATGATGGGATAAATCATAA
AAAAAAGCATATAAAGAAAGTCGTAAAATCTAATAATTCTCCCCCAATAT
ATGTTTTTCCAATTGAGGAATGTATTCTCATGGCCTTCGAATCTCGTAAT
CCACGTTGTTTTATCCATGGCGATCTCCTATTAGGACAAATTGCGCCTGA
TATTATTTTTCTAGATTTAGAAGACAGACTTAGGATATCAAATGAAAACA
TTAAAAGGGGTAAATTGATCGGCCAAGGAGCATTCGGATTCGTATTTATC
TCTACACTTACATCTCGTGGTATCAATGAGCAACAAAAGGTTGCAGTGAA
AATACTCCAACCCACACACCCAGGATACAATGCAAAAGAATCTACTTCAG
CAGCTTATGAAATATCTATTTCAAAATGGGAACGTGATCCCATTCAATAC
GCGGCAAAGGCATATTGCTCTGCTAGACAAGAAATTAGTATATTAATCCA
TTTGAAGCATCCAAACATAGTTCCATTAATAGGAGTTTGCATTAAACCTC
TTTCTATAATATTAGAATTAGCTCCAAAAGGCGCATTAGATAAAAAACTT
GAGTATTATCTTCATTCTGACTGTCAAATACCAATAAAAGTTGTTCAATT
AATAGTATTGCAAATTTCTCGTGCTTTGGAATATTTACATCAATTACATA
TAATATATAGAGACTTAAAATCAGAAAATGTTCTTGTATGGAAATTTCCT
GAGCCATTCTCAAAATTGTCAAATGAAGTACACGTTAAACTTGCTGATTA
TGGCATTAGTKGCCCAACTTTACCCACGGGTACTAAAGGATTTGGTGGAA
CTGAAGGCTTTATGGCTCCRGAAATTGTCAAATATAATGGCGAAGAAGAA
TATACAGAAAAAGTAGACTGTTTTTCTTTTGGTATGTTTATTTATGAATT
AATAACCTTGCATCAACCATTTAGCGGCTATGAAACAATTAAAGAACTAA
TTTTAGAAGGTATTCGACCCCCTATATCAGTTGAAGAGACAAAATTTCCA
ACAAATATTCTTGATCTCATGATCAGCTGTTGGTCTCAACAACCTCGTCA
CCGTCCTTCCACCAGTCAATTAGTATCAATTATATCAGCCCCTGAATTTA
TTAATCTTATAGATGCTATATCTATTGGTACTACGTCAACGTCTGCACAG
ATAGTAACTCCTCGTAAAGAAGTATGGCTATCGATTGATTCTGCCTTTGA
TCAACATTCTTCTCTCAATCTATTAGAGTTTAGTCATGAAAAATGGATTC
AGCATTGTATTTTTAAAACTAAGTTTACTCAAAGTATCACTGCACTTTGT
TTGATAGAAGAAGCTGTATGGGCGGGTGATAATATTGGTCTTATTCATAG
TTACTCTCTTAATAATTACTCAAAATTGTTTACGTACAAAATGGACCCGG
ATTATGGAAATGAACCATCACCTGTGAGATCGATTCATTATTTACAGGAA
ATGCAAAGGGCGTGTATTGCTTTACACAATGGTCGTATGTTTTTATGTGA
TTCTAATATCATACCTAGTTGCAAGGTAGGTGGAGAAGGTTTTTTTGTCA
TGACCGAGTTAGGAAGTTCAAGCTGTATACACTCAATAGCTTCCATCAAT
TTGAACCCTAGAAGTTGGGAAATTTGGTGTGGAGAAAGCCATGGTTCGGT
CTCTATATTTAGTTTCATTGATGGGGTTGTTACATCACAGCAAATAATAA
ATCATAATAATCCGATTGTGGAAAATCTTCTTGTTCTACAAGTTCTCACT
GAGGGAACTTATATTTGGACTTCTCTCTATCCTGGTTTTCATGTTTATCA
GTGGAATACTACCACTAAGTCAGTTATCAATCGTTTGGACTGTTCCAAAT
TAATTCCTGTTTCTGAATCATTAAGAACTATTTCAATTGAAGAATGTTTT
AATCCTGGGCGTTGTCAAATAACTTCTATAAATTTACTAGAATCAAAGTT
GTATGTTGGAACTAATTGGGGATGTGTAATAATTGCAGAGTCAATTAATA
TGCAACCCATTACTGTTTTTCGTCCATATTCAGATCAAGTACAAGCTATA
ATTCCTATTCCAGAACATGGATTACTTGTGACCCTTGGTAAAGGATATAG
ACCTTTAATACCAAGATACGCATCTGGCTGTGAAGAAAATGACTCTGAAG
ATGAGAATAACAATATGTTCGCCCTCCTTTGGACTGCTAATGGTTGGCTT
ATGAATAATTAA

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