EMLSAT00000011520, EMLSAT00000011520-707367 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011520
Unique NameEMLSAT00000011520-707367
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s799supercontigLSalAtl2s799:201864..202839 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011520 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011520EMLSAG00000011520-694286Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000051488EMLSAE00000051488-760416Lepeophtheirus salmonisexon
EMLSAE00000051489EMLSAE00000051489-760417Lepeophtheirus salmonisexon
EMLSAE00000051490EMLSAE00000051490-760418Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774415auto774415Lepeophtheirus salmonispolypeptide
EMLSAP00000011520EMLSAP00000011520Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011520

>EMLSAP00000011520 ID=EMLSAP00000011520|Name=EMLSAP00000011520|organism=Lepeophtheirus salmonis|type=polypeptide|length=229bp
MDKLIHEIVSCPGGHFFCKDCARKGCEGLVQGSRIVYKCFEPKCEEAFDT
QTLSELINPKLFSKYVQGICKEEIKSCFKLEDCPECDYGVVIEDESIMII
ECQYEFCGVRSCRRCKKRAHKLGESCSLSDSDNHFVANKMSEAVIRRCYS
CKKPYQKFEGCNSVKCECGAKMCYICRTPLKGGYHNNRSRECSSSVNMVS
LHEIERRKAEEEARSSLGATGTSFANFTP
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mRNA from alignment at LSalAtl2s799:201864..202839-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011520-707367 ID=EMLSAT00000011520-707367|Name=EMLSAT00000011520|organism=Lepeophtheirus salmonis|type=mRNA|length=976bp|location=Sequence derived from alignment at LSalAtl2s799:201864..202839- (Lepeophtheirus salmonis)
ATGGACAAATTGATTCACGAAATTGTATCCTGTCCTGGAGGACATTTTTT
TTGTAAGGACTGTGCTAGGTAAATCATTTATAATTTGAGTACGTACACAC
TTATGAACTTTTATTTGGTATTTCCTACCGGCTAKTCTTCCACCTCTCCT
TCACTGTAGAAAAGGATGCGAGGGCTTAGTACAAGGGTCAAGAATTGTTT
ATAAATGTTTCGAACCCAAATGTGAAGAGGCATTTGACACTCAAACACTC
TCTGAATTAATTAATCCCAAATTGTTCTCAAAGTATGTGCAAGGGATTTG
TAAAGAAGAAATTAAATCTTGCTTCAAGTTAGAAGATTGTCCTGAGTGCG
ACTATGGGGTGGTGATCGAAGATGAATCAATTATGATAATTGAGTGTCAA
TATGAATTTTGTGGTGTTCGATCCTGTCGTAGATGTAAGAAAAGAGCTCA
TAAACTCGGAGAAAGCTGTAGCTTGAGTGATTCAGATAATCACTTCGTAG
CGAACAAAATGTCTGAAGCCGTCATACGAAGGTGCTACTCCTGTAAGAAA
CCCTATCAAAAGTTTGAGGGATGCAATTCAGTGAAGTGTGAATGTGGGGC
AAAGATGTGCTATATTTGTAGAACACCCTTAAAAGGAGGCTATCACAACA
ACCGTTCTAGAGAATGTTCAAGTTCAGTGAACATGGTATCCCTACACGAG
ATAGAACGGCGCAAGGCTGAAGAAGAGGCAAGATCCTCTTTAGGGGCTAC
AGGAACATCCTTCGCGAATTTGTAGGGAATAATAATCTAGTTTGTACATA
AATTTCTTGAAATGAAATATATTTATTAATAAATTGCATGTAGAAATTGG
GTATTCCAAGCTGATTTTTTTGAGTACAGACATCATTTTAAACAATCCTG
TAATTAATAATTATAGAAGCTTTTATGGGAACAACAACTACAAAATTATC
ATTAGAGTACTTTAAGCACGCCTTGA
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