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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| LSalAtl2s834 | supercontig | LSalAtl2s834:115367..121085 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000011861 >EMLSAP00000011861 ID=EMLSAP00000011861|Name=EMLSAP00000011861|organism=Lepeophtheirus salmonis|type=polypeptide|length=169bp
MIYMLRNPRDVCISMYNHHRIFDNYQGTLEEHLDQFLSGNCGYYTPHDVN
IIGYHLKRDLPHILFITYEEMKKDLGTVIDKVVNFLGLPLLDKDAKSGLI
EHLSIEKMKENPSVNRGLASKMYVSDGQFINKGKIGTWKTSFSPEMIQRF
EDWEKEKFETVGLKFTYEL back to topmRNA from alignment at LSalAtl2s834:115367..121085+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000011861-707708 ID=EMLSAT00000011861-707708|Name=EMLSAT00000011861|organism=Lepeophtheirus salmonis|type=mRNA|length=5719bp|location=Sequence derived from alignment at LSalAtl2s834:115367..121085+ (Lepeophtheirus salmonis)
CAAATATAAAATATTATGTACTCTCATTCAATTTAACTTCAAAAAGACGA
TAAAACCTGTTCTGCCTCCTTCAATACATATTTCATAGCTTCCAAGTACA
GTGAGCCTACTGCATGTTCACCATATATATACATTATTTTTATTTCTGTA
TTCAGACGATAAAAGAGAGTGTTGACCTCGTATTATAATTTATCAAAATC
TATCAAAACATATCTCTGCGTCCAATTAATAGCATCATCATTCTCTTCCA
ACAATGTCGTCAGAACAAAGAGATCCCATTTATGGAGAATATGAAGTCAT
GGAAGACGACAAACAAGATGCCTGGAGAAGGGCAACTCTGTTTGAAGAGC
CCATGATTCGATACAAAAAATATAATCAAATTTTGCCAAAAGCGTTCCTG
GAAATATCAGAGAAAATACGTCATTTCGAAACAAGAGAGGACGATGTTTG
GATTGCTTCACAGATTAAATCTGGTAAGGGAATGATTGATTAGTAGTGAG
TATATTAATATTCGGATTCTCACAATGAACAGGTTCGACATGGATGGGTG
AGTTGACTTGGTGTCTTTTGAATAATTTGGACTATGAAACAGCACACAAG
GAAAATTTAGATGTTCGAATGACGTATTTAGAGTAAGTACTTAGTTTATG
AATAATAGGACCAAGGACGTCTACAGCTTTTTTCGTTTTTTTTGGGGGGG
GGGGGGGGGGTTAAATATTTTTAAATATATCCCTAAGTTAAATTTTTTCC
TAAAAAGATAGAAAAATTAAATATTTTGGAAAAAAAATTCCAAAAATCGA
GAGCTGTTCATAAATTTATGAATTATTTTGCAAAAAAAATATCAAAAGTT
AAATTTCAAATATTAAATTTTTAGAAAAGAAATTTCCAATATTCTGAAAA
AAAAAAATTGAAAATTAAATATTTTGGGAAAATTTTCAATTATCCGCAGT
TATTCACAAAAAAAATCAGAAAATCGAGAGCTGTTCATAAATTTATGAAT
TATTTTATTTTTAAAATATCAAAAGTTAAATTTCAAATATAAAATTTTAG
AAAAGAAATTTCAAATATTCTGAAAAAAAAATTGAAAAATTAAATTTTTT
AAACAAAACTTGACAACTATTCATAAATTTATGAATAATGAATTATTTTG
TGAAAAATTTCAAAAATTAAATTTTTTTTTTCAAATATTAAATTTTTCAG
AAAACAAATTGCAAAACAAAAAATTTCAAGAGTTCACAGCTATTCACAAA
AAATTTAATTTTTTGGAAAAAAAGTTCTGAAATTAATTTTAAAACATAAA
CTTTTTGAAAATAAATTTTAAATATTTAATTTTTCGGAGAAAAATTTTGG
AAATTCATAGATACTACAAAAAAATTAATTTTTTAGAAAAATGTCAAAAA
TCCAGAGCTTTTCACAAAAGTAAAATTATTTGGAAAAAAATTATACAATT
AAATTTCATATAAAAATTTTAAATATTAAATATTTCGGAAGAAGTTATTA
AAAATCCATAGCTATTAATTTTTTTGAAAAAAATTGAAAGTTTAGATTAA
ATATCAAATATGAAATTTTCTAGAAAGATAAAAAATTCATTAATTTGGGG
ACGGGGCTACAGCCCCTCTAGCCCTTTCCTTGTGGAGCCCCTGAGGAATG
CTAATGACTGATAGAATATATTTTGAGTAGAATCAATTCAGTTATTCTAA
AATGTCAAAAATCCCTTATACCTACGGATGTCATTGGAATAGCAGATGGA
AATAAGTCTCCAAGGCTCATCAAAACACATTTAAGCTTTGACATGCTTCC
ACAAAAAATTCTACAAAACAAAATAAGGTATGCAGTCCATTAAAAAGGCC
TTTTTTGCGGTTTCATAACACATTTTTACCTTTATTGTAACTCATCATCT
TTCTTTTAAAAAGAAATCCTTGGGGAAAAAGCTCAAAATCATCCGTTGAT
AATTATTATTAATAGGCCAACAACTCTTCCCAACTATAGAGAGTGGTTGA
TGTACAAGAATAGCCTCTAGGGAGCCCTTTATCCAATCAAAACCTGACAT
AATCTCAAATTTTAAAGACAAAGAGGAAGTCGAATTTCTGTCAAAAAATT
TAAATTACTCCGTGGTATAATTTACTTGATATAATCTTTGCTTTAAGTTT
GGATTTCATTTTACATTTCATAATTTGTTAAGTCATAAGCATAGTTTAAA
AATCTTATTGTGTCTTGCTCCAATACTAGCGCCCTGCATTTACAGATAAG
TCGTGCCGGACGTTAAATAGTCCCTATGCAAGTATAAATAATTATTTAAT
AGTTAATTAAAACTGTTTCAAATTCAACCAATCAACGTTCAGAACGCTGA
TAAGTGGAAAATATGTAAAAATCGACAGTTGATCACAAAATAAAGTGTAT
AATTTTATGCTTGTGAGGTAACGCCATGAATACTTTTTAATGGTCTCTAA
TTTCATACCCAATATCAATCATAGACATCAATGCAATCATTATTCCATTA
GACCTTTTCATTGAAGTCAGAAATTTAACAAATATACAATAAATTTTGAT
CAAACTCCAGTAAATCAAAAAAGACTATTTAACATCTGTATTCAGTACAA
TTACTCAAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTAATTTTAAACTTCAACAGAATATAATTTATTAATTAA
CAATAGAATTAAAAAAAAAAAAATGCTAWAAATAGATATGTGTCTGAGCT
CTCTTAATCATTAATGTAGCCGCCCTTAACGGCAATGATGGCTTCCKGGC
GRCGCCAGAAGACCTAACACCTGCTGAGAATGTAGTCCTATGTCATGGGG
TCCCAATGCTGGTTTACAGTGACATTGAGGCCCTCTGTATTTGGATGGAG
GACACTGCAGACCTTCTCCTTGACATGCAGTCAAAAAGTATAGTCAAGGA
GCTTGGCATCAGGCTAAAAGGGGCCAAAAGATCTCAAAAGACTTATTCAT
AAGAATCTTGCAACAGAGAAGATGGGTTTCCTTCATTGTTGGTGTCAAAT
GTGGCCTCTCCACCCTCAAAAGGCTCTTTTTACCCACTTTTTTTTAATAG
GTGTCTGGAAATTCTGGTGTGAAATCCCCAGATCTCTTGCATGGACCATC
ATAAACTTGAGAAAATTGGTTTGGGAAGTTTTCTTTAACTCTTTTTGGTT
CAGTTTGGCCTTTTTAACAGAGCCTTTCTTCCTCCCCAACGTTACAGACT
TGCTGGAGGTAATGAAGGTGGTCCTGGAGACGCACAACTGCTTTGAGAGC
GGGAATGGAAAGTCGTCGACCACGTTCAAGAGTCATTTTCTCGAATAGTA
TGTAAGATAGAGAGCTCAGATTTGTTTATGTTTTTTTGTAACTAATTGTG
TATGTTTTTTTGTAACTAATTGTTTATGCTTTAATATATCGGAAAATTTA
TCAATTTTAATAACTCAACCTTCATTACTTATTGGTTTAGTAAGTATTCA
GATTTCAATGGACCAGTATATTAAGAATTGTTTATTAGGAACTCAAAACT
GAAGCATAACAAAAGAGAAGTTACATTCTTAAAAGAATATTTTTATTCAA
TTATCAATAAATTGGACGATGGGTAATTATCCGGCAATGGTGTTCTAGTG
GATCTGAATCTCTAAAAAATTCTCCAAAGTTTTGTAGTAATAAAGTTAAT
TTATTTTAATTAGGACCAATATGATTAAATATGTAAAATATTTAATCATT
TTTTAAAATTCAAAAAATAAAAAATACACCTTACAGTAATACCAGACATT
TGCTATATGTATGCTCACATTCAAATAATATTCCCTAGTCGTTTCCTTCG
ACGCTTCACTAAAGAACCAAATTATATTTTCCTTAGTCTTACCCCCTACA
CATTTAATCCAAAATTGGAAATGATCGAACAAAGGGTTCTGCAAGCCTTT
CACTATACCTTGAACAAAAACATCTCATATCCATCCCCTTTTCTTTCTTC
CGATTTGATTATCGAACTGAGAAGCATTGATATTTAATTTAGATCAAAGT
AATGCCTACCAAAAATCTCTATGAAATAACTATATTATTTGTTCAATTAA
TTTTGTTTTGGATCGATTAGGGACGAGCAAAGTAGAATAATAAGAGAAAA
ATATCTTATTCTTTGAATTGTAATGGTGAATCTATTGTTTAAACTATGAA
AATAAGAATGTTCATAATGATTTAATTTTTAATGTAGGATAGGACATGAT
ATATATTAGAAATGGCGTCCAGTTAGAGAGATAGATTTTTGATAGATAGT
GAACATTCCAGTGTCTATTCCATTTTGAGATCAAAATGCATGAGAATAGT
TCCCATTTTCCTTAACCATAATGAAAATAAAGGTTTTTATAATTATAAAG
TTTGATTGGGTAGGTCCCCAAGATGCCCGACATCAACAATGCTGACGTCA
CATGAAAAAGGTTTTAAATTTAAGTGGGGAACCGCGGAGATGTGTTTTGT
ATTTAAATTGATCTATTTATAATTATATATTTTTATCAGATGATTTACAT
GCTTCGAAACCCGAGAGATGTCTGTATTTCAATGTACAACCATCATCGAA
TATTCGATAATTATCAAGGTACTCTTGAGGAACATCTGGATCAATTTCTC
TCTGGAAACTGTGGGTAATAAATGGATCTGATATAAACCGAAAAGTCATG
TAATATCATGTTGATTCTTACTGCAGTTATTATACACCTCACGATGTGAA
CATCATTGGATACCACTTGAAACGAGATCTTCCGCATATCCTCTTTATAA
CCTACGAGGAGATGAAAAAGGATTTAGGAACTGTAATTGATAAGGTGGTA
AACTTTTTAGGACTTCCCCTATTGGACAAGGATGCAAAATCTGGTTTGAT
TGAACATTTAAGCATTGAAAAAATGAAGGAAAATCCATCAGTGAATCGAG
GATTAGCTAGTAAAGTAATTATTTTTGCAGAAAAAAAAGTTATTTAGGCA
AATATTTATCTTTAAATCGTTCAGATGTATGTAAGTGATGGACAGTTTAT
CAATAAAGGAAAAATTGGAACTTGGAAGACGAGCTTCAGCCCAGAAATGA
TACAACGCTTTGAGGATTGGGAAAAAGAAAAGTTTGAAACAGTGGGTTTG
AAATTTACGTATGAACTATGAATTGAATACATAATTCAATTAAAACCTCG
TGGAATATTATAAAAAGCTGATACTGATAATTACATTCAATGATTAACTG
GTGTACAAGTTGCAGCCAAAAAATGTGATGAACAATTTTAAAATGAAGGT
ATTTCCAGTTCTTGGAATAAGGATAATGCAGTAATTGAATATTCCATGGA
TGATCGATATATTAATAATTTTAATACATATTACTAAAATATAAGTATTT
TGTCGCATATTATGAAGTTCAAATGCCCACAGTTATATTACTAACAAATG
TATAATAACCATGTAATTAAAGTAGATCAAATTAATTAAAATAATTATAT
CAATCTATAGTTGGTAATTAGAATAATCAACGCTGTAATTAAATAATGCG
AAGAAATTGCAATACACATTATCCAGTTAAAAACGGTACATTTGTAAATT
TGCTAGTGATGCAACCTATCTATGATTTGAAATAAAGTTTAATTAATTAT
TTATAATTGTTAATCAGCT back to top
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