EMLSAT00000012121, EMLSAT00000012121-707968 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012121
Unique NameEMLSAT00000012121-707968
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s86supercontigLSalAtl2s86:724572..728179 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012121 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012121EMLSAG00000012121-694887Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000054318EMLSAE00000054318-763246Lepeophtheirus salmonisexon
EMLSAE00000054319EMLSAE00000054319-763247Lepeophtheirus salmonisexon
EMLSAE00000054320EMLSAE00000054320-763248Lepeophtheirus salmonisexon
EMLSAE00000054321EMLSAE00000054321-763249Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779483auto779483Lepeophtheirus salmonispolypeptide
EMLSAP00000012121EMLSAP00000012121Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012121

>EMLSAP00000012121 ID=EMLSAP00000012121|Name=EMLSAP00000012121|organism=Lepeophtheirus salmonis|type=polypeptide|length=425bp
MDYMLRIFLFGFCCFLIEAHADNEGKTWVLLVAGSNTWDNYRHQADVCHA
YQIARTHGIPDERIVVMMYDDIASNKVNPTPGKMINKPGGKDVYHNVPTD
YTGAAXNPSVFLKVLSGINPKTGSQKFINSTSKDNIFVYFADHGGPGLLA
FPDDVLQVGDLNKTIHKIQKKKQFKKLVFYVEACESGSMFDGVLTGLKNV
YAMTASNSEESSYACYYSELYDTYLGDVYSVNWLEDSDKEDLKKETIEKQ
FDIVRKETNTSHVTQFGDKKVAESHLSEFLGQKSGIFEEHSEESSPMDTI
SSRDVSLDLIFRTKNAALIKLTKAKRQFMREIFDQIYLGVQGINENDLTS
IKTDKILLKHSDYSCYSQVVDGLHKNCFNXAKHSYALEFLQHFVNICHYN
IKTVHVLDSINNVCKHWISTFDSIL
back to top

mRNA from alignment at LSalAtl2s86:724572..728179+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012121-707968 ID=EMLSAT00000012121-707968|Name=EMLSAT00000012121|organism=Lepeophtheirus salmonis|type=mRNA|length=3608bp|location=Sequence derived from alignment at LSalAtl2s86:724572..728179+ (Lepeophtheirus salmonis)
AGTTAGATATAGATAATATTTAGTTTTGAGTTAAATTAATACCTGAATAT AGAAAGTTTCATTCATTTTAAATCAAAAAATAGCATGGATTACATGTTAA GGATCTTTCTTTTTGGCTTTTGCTGCTTCTTAATAGAAGCCCATGCTGAC AATGAAGGAAAGACATGGGTTCTTCTTGTGGCAGGRTCGAATACATGGGA TAATTATAGGCATCAAGCAGACGTTTGTCATGCCTATCAAATTGCTAGAA CTCATGGAATCCCTGATGGTAATGATTAACTTACTTCACTTGTCTTTTTA AATATAATCTCAATCAATGGTCTTGTCGATATTAAACTTTGCAGAAAGGA TTGTGGTTATGATGTATGATGATATTGCATCAAATAAGGTGAATCCAACT CCTGGAAAAATGATCAATAAGCCTGGGGGTAAGGATGTATATCACAATGT GCCCACTGATTATACTGGTGCGGCTGKAAATCCATCGGTCTTTTTGAAAG TCCTAAGTGGAATCAATCCGAAGACTGGGTCCCAAAAATTCATCAACTCA ACTTCCAAGGATAATATTTTTGTATATTTTGCTGATCATGGAGGTCCAGG ACTCCTTGCCTTTCCAGATGATGTTCTTCAAGTTGGGGATTTAAATAAGG TTGGCTCTTATTATTTTTCTGTGTATTTGTATGTTGATAAAAACTTATTC TTTATTTAATAGACAATTCATAAGATTCAGAAGAAGAAACAATTCAAGAA ATTGGTTTTCTATGTCGAGGCATGCGAATCCGGATCAATGTTTGATGGAG TTCTTACTGGTCTAAAAAATGTTTATGCAATGACTGCATCTAATTCTGAA GAATCATCTTATGCCTGTTATTATAGTGAACTTTACGATACGTATCTCGG CGATGTTTATTCAGTCAATTGGCTTGAAGGTCCGTACTCATTAATCTAAC AAATACATTGATACATTATAGTAAATTTCTTCATAACTTCTCTTAGATTC TGACAAGGAAGATTTGAAGAAAGAAACCATTGAAAAACAGTTTGACATAG TTCGAAAAGAAACAAACACCTCACATGTAACTCAATTCGGCGATAAAAAA GTTGCTGAATCTCATCTCTCAGAATTTTTGGGACAAAAATCCGGAATATT TGAGGAGCATTCAGAGGAAAGTAGTCCCATGGATACCATTTCATCCCGTG ATGTAAGCTTAGACTTGATCTTTAGAACAAAAAATGCGGCTCTTATCAAA CTCACAAAAGCCAAGCGTCAGTTTATGAGGGAAATCTTTGATCAAATTTA TTTAGGTGTACAAGGGATCAATGAAAATGATTTAACCTCAATCAAGACTG ACAAAATCTTATTGAAGCATTCAGACTATTCATGTTACTCTCAGGTAGTG GATGGKCTGCATAAGAATTGCTTCAATTTKGCAAAGCATTCCTATGCACT TGAATTCTTACAGCATTTTGTCAACATTTGCCACTATAATATCAAAACAG TCCATGTTTTGGATTCTATTAATAATGTATGTAAGCACTGGATATCAACT TTTGATTCTATTTTATAAGGAAATAGCCATTATAACTTTTAAAATTGTTT TTGAATATAGAATGTGTCATAATAGCTCATTTTTTAACATTTCCAACGGA TTAGAAATTTAATTTTAGTTTGTTTAATTGTTCAAATGTCATTTGTCCTG ATGAATAGATAGCTAGTCTACTAATAAAGGTCTAATTTCGTAATAAATTA ATTCATTTGAACCATAAAGTCTATATATTTATCAAAATAGGACATAAATT TCCCTAAAGAGCTATACATAATGATTCATGTGTCTTCCTTATTTTCTAGA AAAAGTAGTACATTTAGAAAGAAGAAGAATAAATCTTGTTTTTGTTTCCA AGATAAAAATAAAGACTTGTTAAAAATATTAATCCGATAATCAGAAGGAA AAATATAAGTGTATAAAAATCGTTTCTTCAAATTACGTATATTATGGAAG TTAATATTTTGAAAACTATTGATTATATGTAATTATAAAACAAACTGTAT TATTATTATTATTATTCCTATAATGAGTTGATTACTATTAATTAATTAAA TTAAGACGTACATAACCAAAATGAGTGAATAACTTTTATCTTTAAATTCT ACACAAATACGAACACAGAGATTACATAGATACAATTCATTCATTGATTT CCATGATGCCCACCAGGTCCATGACCACTTCCCGAAAGTTGATGATGGCC TCCGTACACTGCACTCCAATCAGAGAGATGCTGAATGAGCCCATGCATAG CATAATGCGGAATACCAGGAGTCTGAGCCGTTTGATGGTGCTGGTGATGA GACTGAATGAAACTCGGGGTGACGCTCCTTTCAGAAGCAGTATCACTCTG ATCATCCATAGGAATGGGAGTACGGGTTCCAGTCAAATGCATTTGTTGCT GTTGCATTTGTTGTTGTAATTGCTGTTGTTGTTGTTGCTGCTGCTGCTGC TGTTGTTGTTGCATCATTKCTSCAGCCACTGCAGGAAATGCATAGTCCAT GGCAGAGGGTTTTAGATCTTGTGACATAGCAACAGCTGCAGCAGCTATAC TCGCAGCATGAACATTTCCACTAGATGCAGCAGAGGGAATGCGTAGAGTA GGGGTGGTAGGTGTGGCAGAAGAAGGGTTACACTTAAGGGAAGAGTTTAA TATTGGGCTTGGAGCGACCGGATGGGGAGTTGGGGTGGTTTCGTTATTCC GATTATCAATCATAGGCTCTACCGCCAAATTACTGTTGGTTGTTGGAGTT GTTGTAACAGGAGTACTGCTTGATGGAGTTGGATTATTGCTATTATTGCT AGTATTAATTGAGTTTTGATTGTTACTCTCATTGTCATTGTTGTTATTGC TTGGGTGATTGTTATTTGAATTTGATGTGTTGACAGATGGAAAGTTATGA CGATGGAAAATATGTTCACTTTTAGTTGGGACAAATGCTGATGGGTGAAT AGGAGGCGGTTTTCCCTTATTATTTTGATGCATAATTTTTGGAACTTCCT TGCCATGTACACGTAGGTGCTTTTTCAAATTTCCAGATTCGCAGAAACCT TTGCCACATACTTCACAAACATATGGACGCTCACCTATGTAAATATGACA TAACCAATAAATGTAAGTACATAAGCCTTATCTGCTCTTAAAAGGATGGT AATTAATTAAATCCTTACCTGTATGAAGTCTTGTATGAACGACCATTTTA TCCCGCTGAGTAAAAGTCTTGGCACAATATTCGCATGCATAGGGACGGGT ATCTGTGTGTATTCGCTCGTGTTTACGAAGAAGATCTCTTCTTTGAAAAT TTTTTGGACAATAAGCGCATTGATAAGGTCTTTCACCGGTGTGAACACAA CGGTTGTGAAGTTGAAGCTCAGAACGACGAGCAAAGGCAAAACCACATAA TTCACAGACATATGGTTTCTCTCCAGTATGGGTGCGGCGATGTTCTTCCA TATTACCCTTTTGACTGAAGGTTTTGCCACAAAAATCGCAGGAAAAGGGT TTGAAACCACTATGAACCCTTAGATGTGCATCTAAATTGGCTCTTTGTGT AAACCTAT
back to top
Add to Basket