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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s9 | supercontig | LSalAtl2s9:1117895..1125483 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000013040 >EMLSAP00000013040 ID=EMLSAP00000013040|Name=EMLSAP00000013040|organism=Lepeophtheirus salmonis|type=polypeptide|length=262bp
MEMGELHQHHHPQGQQHRGSNNNNSVTGNNTTSNNHHSSLSSDQHIQQTH
HKGSGVHHSLHHHAYTSSSPSPNGGSGDNSNHNNSSIGQILSMLNDISPD
DPIENLLVVSRKTYYSDDGGDEYFNSPHTHHHIHHLQENKHEASEYDDPN
SSSVAXSTTSVNLGPRDEKYWERRRKNNMAAKKXRDARRVRENQLRLKVL
CLENANQVLRTQLKREKDEHDKTLQALNKEKEDNKIMRHKMSRFSNEIHH
QHHHPTSHLPNS back to topmRNA from alignment at LSalAtl2s9:1117895..1125483+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000013040-708887 ID=EMLSAT00000013040-708887|Name=EMLSAT00000013040|organism=Lepeophtheirus salmonis|type=mRNA|length=7589bp|location=Sequence derived from alignment at LSalAtl2s9:1117895..1125483+ (Lepeophtheirus salmonis)
AAAAATAAAAACGTTATATATATTTATAATAGTATAATTTTTTTCAGTTG
TCGTCCTTAAATCCTATTGCAAAAATACGCGTGTTCCAAGCATCATCATC
CTTCCTNNNNNNNNNNNNNNNNNNNNNNAAAAAAAGGTGCTAAACATTTT
GACTATATATTTGTTATTTATATATACTCATTATTAACTCTATGTGAATC
AATATGTGACAATACCGCCATCTAGGAGCAAACAAAGTAGTTATTCCTAC
TTTTACTACTTTAGAGACCTTCTTTGAGTGGTAGTTTCCTAACTTTTTAA
GGACAGGTTGAGTGTTTTGTGCTTCAAAATTGGATTTTTTGCGAGGAGTT
CCTACATTTCCGCCATGGAAATGGGAGAGCTTCATCAGCATCACCATCCT
CAAGGGCAGCAACATCGCGGGAGCAACAACAATAATAGTGTCACGGGTAA
TAATACGACAAGCAACAATCATCACTCATCCTTGTCTTCCGATCAGCATA
TTCAACAAACGCATCACAAAGGATCCGGGGTTCACCATTCTTTGCATCAT
CACGCATATACTTCCTCTTCGCCATCTCCCAATGGGGGCAGTGGGGACAA
CAGTAATCACAATAACAGTAGTATAGGGCAAATCCTCTCCATGTTGAATG
ACATCTCTCCCGACGACCCCATTGAAAATCTACTTGTTGTTTCTAGGTGC
AAAAAAAGAAAACGAAAATATCAGAGTAATCAGCAGCTGTGCACAAATAG
TTTTTAACACTTTCGTTTTCAATTGCTTTTTTTATTATTATTACGATCAG
CTCAATTCCCCTCCTTCATACACACAGCAGCTTCCTTGTGTGCGCGGTTC
TTTCTTTTTTTTTTGAAAATTTTGAAAGACGTTCCATTATATTATTTACT
TATTCGTATATATTCACTAGTGTTCATACTCGGTCCGAAATCGAGTTTTT
TCCCCCTGTTTTGGTCTTAAGTCCTTCCAAAACCAAGTAATTTGTGAGCT
TATATTAGAGAAAAACCATCAGTTTATAAATAGTAATTAGTTTGGTCTTA
TTTTCTTTTTTTTTGTCTAATTCGGAGAGGTGAAAAAACAAAACAAAAAA
CATCAGAAAATGTAGAATTAGAGAAAATTAAGCAAAGATTGTTTAAGTAA
AAATATCTACGCAGTTTGTGATTTGACAAGGATGCTTTTATCGTAAATTT
CAAAAACAGTTTGATTTACTTAGGATTTGGCTTGAAATAATTAGTTCGGT
GGTATATCTCTCATTGGAGTAAAAAAATTTGTTATTTTTTTTCTAGACCG
ATCCCAAGCGACATTAATGGTTCCGACTGCACTTTGAAGCTGTCGACCAA
AATATAACTCATTCGACTATGAGGCAACATTTATTTATATAAAAAGTTAA
AGATATATATTTTTTTTAAATTTTCTAAATTATTTATTCAGACATAATTA
CTTCGGTCTTACAAAAAATATTACAGTCTCTGACTGGTGTAGGATTTTCA
GACCAAAATCAAATACTAGTTTAAAAAAACAAAAACACTATTTATTACGT
TTTGCATATATTTGGAATTTAATTCATTGGTTATGTATAAATATTTCATA
AATTTAGAGGATGACCAATTGTTCTGTTTTCACCAGACTTGCCCTTTTTT
TACATCCTGTTATGAGGTGCCGTGGGCTTTTTGTATAATTTCATCATATG
TCCCATATTTTTGTGAATCAAGTGAATTTTCATTCGACTTAATTATCAAA
ATCCGAAAAATTAAAAAAAAAAATATTTTATTATTATTAAGAGTATTTTA
AGATATTTTCTGAACAAAATAATATACCCCCTCAGCCTTAAACCACTAAA
ACTGTGATTGATTGGACCACCTGTACTCTTTACTGATGATCAAATCATGG
TTTCCACACATGAATTACTGCTAGAGGGATAAAATCAAATATTTGTAGTT
TTCTAACAATAAACACAAAAAAAATCAATCAAATCAAAAAATTCCAATTG
ATTTATTTACATCAGTATTTAACTAGAGATGTGAAAATGGTCCAAATTCT
CGCAAGTGTAAATTATAGATATATATATAATTTATGTTGGTAACTGCAAA
ATATTGCTGCATATATTACATAACCCTTTTTATTTAAAAAAATCAAAAGT
ATTATTGACCAAAGACCACTTAAGTTTATATAGTAGTTATTTTTGTCAGC
AGATGTTATCTCTCAAAGGGGGAAAAATACTCTTAATATTTAAATGTACG
CCCACCAGGATCTTGACAGTTTTCACATCTCAACATATGACCGTTATGCC
GTATATTTTATGGGCATATTTTGGTCAAGTATTCTAGGTTTTGTTTTTAT
CCTAAATTTATGGGATAAGTTGAAATACTGTAGCCATAGTTGAGAACCTT
CAAATGATTAGAGTAATATATTTGATCCTCTTTCAAATATTTAAAATCGA
TCTATTTTAAATTATGTTATTGTGATAATGTTTTTTTGGTACTTTAATTT
GTAATTTACGACACTTTTTCAAAAGGATTAATCAAAATAACCCTTCTTGA
TAAAAATCAATAAATCTAGATAGCTTTTGTGCTATGGGACTACATAATAT
ATATTAGCTTGACATGAAAGATTCGCTCGTCGTGTGTTTATTTATGATAT
TGACCATTAATTATTCGTTGAAGAATACTATAAAAACATTCCTCAAATCT
GTATGTTATTTATTAGTTCAGGAGATTAAAGGAGTCAGTGTTGTGATGAT
GATGATTACTCAGTTCTATTTATTGATGTCTATAGATGAATATATGTATA
TCTATGTACAGGACCGAAACGAGAGGGAATTTGCACTTAAATATCTATTT
ATGTTTATATTTGGCTATGAAAAACTGCACACTTTTGCTCTTCTTCTTAT
CTCATTTAACTTGGGAAAGAAACTGCCTTTAACGTGATACAATCAAAGTT
GATGGGAGATGAATAATAGCAAATCCCTCAACTCTTTACTTATATATATT
TATGTGAGCTTACAGGGCCGCTACCTTTTGCAGTATTTGTGCATTTATAT
GGGTCATTCTGTTGTTATGTAGTTTAATATATACTTATATAATAAAAGTG
CATTTTTATGCATTTAGGGGCAATGCAAAGGCAATAAGTTGACTTTCTGT
CCACCTTCCTTTTACCTATAGGTGAATTTTGAAACTGAAAGGAGAATAAC
TGGGATGAGTAGAAAATAACACAGTTATATATGACTTACTGCTTTTAACT
ACTACAACGGGTGGAGGGGGGTCTGCTTACACGATTACGTACTACAGTAG
TCGTACATAATAGATCGTTTATTCTTAAAAGATTTGTCCTTGGACTTGAT
TAGTAATATTGTTGTCGTTTGTAATGATATTATCTATTTAAAAGAATGCA
TCTCTGATACAGATGCATCCTCTATCTTTTTCCCTTCAACCCAATGTCAT
CTTAGTCTAATGATAGGGCCTGGACGGAAAAATTTGTATTTTGGCCCTGC
AGACTGATAAATAGCAAAAAAGTACAATCTTTCAGCTGATCAGAAAGGCC
CTACACTTGGTAGACTCCTTGGATTTTGCCCAGGAAAGTGCCTGCATTAA
AGTGGCCGKCGTTATACCTCCTTTCATCCCAATTGATGTGATCTACCCCA
ATAACTCAAAGTTCCTTCAATTTTTGGATAAACAAACTCCACTTTTTTTT
ATTAACATGGAGCAGTGAGTTATAACAACCCTATGGTATCCATATACCTT
TTTGAATATCTTGCAATGCAAAGAATCAAGCATTTAATGACTGACTATCA
GCTGCTTCTCTCTTTTGGCTTTTTGGGGGAAGTTCAGCCTATAAGCTTTA
GAAGATATTTGGAAAAATATTGATTAGACAGTCTTCCTTTCTCTAATTGG
TTGATTACTTTGAGAGGAGGGCACATCAGTCTCCTACGTTAGACAACAAC
AGTTCACACAAAGATTTGATGTTATACACTTTACTATTCCTTTCACTCTT
GGAAATGTTTTCCCGCGCCATTGGGCTTTACATATAATAGAGTTCTCAGT
TCATTACATTATGAAAAATGGGTGTAAATGGGCATGAACGAATTTTAAAT
GAACAGCATACATATCCACAAGATGGCGCATGAGTATATACAATACATTT
AAGAGACAAATACACACGCAAGGTGGCGCTAATATAAATAACCTCATGGA
GTTTGGGAAGGGACACATATCGTTTGCATTTCTCTTGCCTCTAGTTACGG
CAAAGTATGATATATATTGTGGGTAGTTTGTGCATTGGTACATCCATTCC
ATACATACAAAAAAATATATTCCTTATATTATTGCTATTTTTGAGATAAC
TCTCTAAACAATACGCACACAGAGGGAGAATAACTTTGATAAAGGTCAGA
TAAAATGTCATAGAGATAAATCAAACTCAGCTTCATAATTCAAATAGGAT
AGACAGAGATAGAAAAGAAAATTTTGGCAGTGTTTTGTATGTACATCAAT
CTAAACTCGTTTATCCCCTTAAAAACGTTATTATTTGTGATATGTTAATG
TAAAAACAATCTTGAGGAAAAATCAAGAAAGGGAGAAAATCCCGAACTAA
AACAAAAAAAAATCTCATCTGCAGGGTACCGTGACAGTTGTCAAAAAAAK
AGGGAGTAATCAGCATACTTTGGACAGTGCCTACAGTATACACTGCTTCC
AAGTAGTTAATAAGAATAATTTATTGATAGAAATTGACGTTCATTCGTCA
AAGAGTACAAATGTAGTCCGCACTCTATTTTGAGAAAAATCATTCTGTCT
TGCTTTTGTGTTGACGGAAACATTTGTTTTTAGAAACTTTGATTGAAACG
ACAGTGAATTGACCTTATTATTTGTTAATTTTTGATGATAAGAGCTCTTA
TGTATTTAAGAGTTTTGATAAGTGTGCAGACGTCAAATGCAGAAAATGAA
CGAAAAATCTACTTCCATGGCGATTTTTTTTGTTAATTTTTCACTTTATT
TATGAATCCTAAAAATATATTAATATTTTGAAACTTTCTTGAAGTAATTT
TCTATTTAACCTGGTGCCTAAAATTATACTTGTTCCATAGTGTACATACT
ATCAATTATTAAAAAAACGCCCCAAATTTTAAGGGACCTCTACAAGGCAT
CATTTAAACAAATATTATACTATTCAAGTATCTCTATTTAGCAATTGAAT
TAGTTTATGNTAGTATATTTAAAATACGTTAATATTTTACCATGATTCTT
AATGAAAGTCTACTTAGGCTAGTTTAAATTATTTAATTTATGTGTTTACG
TCATAAGTAGATACCGATGATAACGTCATTTGTAAAAGATTGTTCTATGG
GACAACTTTTGCCTGAAAATTTGGAAGGGATGCCAAAATTTAAGGACCAA
TAACTTCCTAGTTTTCTACAATTACATTACTATTAAATAAATGCTTATTT
AATGGTGAAATGTATCAAATTTAATCTATCCTGTTCTACAAACGAATGTA
TCAATTATTTTATTATATTGGAAGGCGATAAAAAGGCAATCAAATAAAGT
TTCTTATTAATATATAATAATAATAAATTTATTGAAGCAAAAGATTGGAA
TCAGAGGGATAAATATATTAGCTTTTCTTTTACAAATATTTTGTATAGTA
TTTAGTATGTACTTACATATCTTATGAAGTAAAGTTACCTACAAAAAAAA
ATATTTTGTCATATGAACAAACCCATAAAATTTGAGGACAAGAAATATGA
ATTTCTGTGGACTCAATTTCAAGAAGCTAAGTTTGTACAAGTATTGCATG
TACCTAATTTAGTATTATTTAAAGGGATACTTGTTTATAATTAGTGATGG
ATCTGTTATAAAAAACTAAAAAGACTAGAGTCGTTTCAGTCCGGTCTTTA
TAAAAATTGTCAGTAGTGCCATAATTATTGGTCTTTTATGGTAGSTCACG
TCCCTACCTTTATTGTATCACGTAACCTTTCCTCCAAAAAGAAACCGAAA
AAAGGCCCGAAATCCTCTTGTAGTCAGCAAAATATGCAAATCATATCAAC
TGCTATTTATCTCTTAAGTAATCTCAGACCAGGATATTTATATTATTTCT
CCACAATTTGACAATGAATTACCTTTAAATACATTTCATAATAGTATATT
TACATTCATATTATTTGATTTGATACTGCATTATAAAATTGCATAGTCAT
GTTATATTAAAAGTGTAGCTATACATTTATATTTCTATATCAGAGCCAAA
TTTTCCTTCTTAGAAATAATGAAATGGTCAATATACATATATATGCGACA
AGGGATCGTCAAAAAATTGTATTCCTGTTCTTTTGGAAACGGAAAATAAG
TATAAAACATGTTACAGGGAGGAAGTGACATCCTACAAAAAAAAAAAATA
GATAGGATATTTAGTGCTAGGAATGTAACGCCGAAAGCTAAAATGATGGT
GCTACTAACCAGGTCTTTTCTGCTGTTCATCATTACCTCTTTCAAAGAGA
CAATATACCTGAAAACTTAAAGGAGTAAATGTCTGTTGGCTAGAATATAT
TATATTATATTTTGAAACATTCTACCTATCACTCATTATTTTTTCTTTCT
TGCATTCTTCACTCCTAGCTAGGAGTGACGAAAATAAAGCGATATCTAGG
ACTCTAGAACCGACTAATTGGTTTTTAGGACTGTTGAACAGTAAAAAAAA
GACTGAAGGGGAGAAAAATAATAGAAAAAAGTATTAGGAATTCAGTCTGA
GGACCGATCCAAAATAAGTTAAAATTAGATTGTCCTTGAAACGACGTCTG
TTCCCCTCTAACCCTGACATATTTATAAATAATCATAATTGGCCAAATTG
ATGATTTTATTGAGTTGACGTTGTTTATCTTATTTTTTCCCTCTTTTTTT
TTTTGCACCTTCTCTGGGATTCGACGAATTCTTTCTTTAGTAGTCAAGAC
TCAACTAATGCACAAGTGGGTAGCCTTTCTCTTGGCGCCACAACTGTCCT
TCCCCCTCCTCATCCTTCAAATTCAACTCAGGACAATCACTCACATCATC
CATCCAACTTCATCGAGCCTTCKCCTGCCGCGACCTATCAGCCTGAATAT
AATGTAGGATCCAATTACACCTCCTCTCGTAGAAAAACCTATTATTCGGA
TGACGGTGGAGACGAATACTTTAATAGTCCCCATACTCATCATCATATTC
ATCACCTCCAAGAGAACAAGCATGAAGCCTCCGAGTACGATGATCCCAAC
TCCAGCTCCGTCGCARCCTCCACTACGTCCGTCAATCTAGGTCCAAGAGA
CGAAAAGTATTGGGAAAGGCGGAGAAAGAATAACATGGCGGCMAAGAAAA
GMCGAGATGCCCGAAGAGTTCGAGAGAATCAACTCCGTTTAAAAGTATTG
TGCTTAGAGAATGCCAATCAAGTACTAAGGACTCAGTTGAAGCGGGAGAA
AGACGAACATGACAAGACTTTACAGGCTCTCAACAAAGAGAAGGAGGACA
ATAAAATAATGCGTCATAAGATGAGTCGTTTCTCCAATGAAATCCATCAT
CAACATCATCACCCAACCTCACATCTTCCCAACTCCTAA back to top
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