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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001506 | Peptidase M12A, astacin | PRINTS | PR00480 | ASTACIN | coord: 429..446 score: 54.17 coord: 354..372 score: 32.28 coord: 410..428 score: 55.0 coord: 496..509 score: 25.24 |
IPR001506 | Peptidase M12A, astacin | PFAM | PF01400 | Astacin | coord: 332..511 e-value: 3.0E-40 score: 137.5 coord: 124..249 e-value: 7.7E-35 score: 119.8 |
IPR006026 | Peptidase, metallopeptidase | SMART | SM00235 | ZnMc | coord: 121..252 e-value: 2.8E-32 score: 123.2 coord: 329..460 e-value: 1.4E-37 score: 140.9 |
IPR024079 | Metallopeptidase, catalytic domain | GENE3D | 3.40.390.10 | | coord: 121..297 e-value: 7.8E-45 score: 152.5 coord: 328..512 e-value: 5.4E-53 score: 179.1 |
None | No IPR available | PANTHER | PTHR10127 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING | coord: 320..510 |
None | No IPR available | SUPERFAMILY | 55486 | Metalloproteases ("zincins"), catalytic domain | coord: 121..242 coord: 269..298 |
None | No IPR available | SUPERFAMILY | 55486 | Metalloproteases ("zincins"), catalytic domain | coord: 328..511 |
IPR003582 | ShKT domain | PROSITE | PS51670 | SHKT | coord: 603..635 score: 7.939 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000008430 ID=EMLSAP00000008430|Name=EMLSAP00000008430|organism=Lepeophtheirus salmonis|type=polypeptide|length=635bp MPLGHRLLRPPIKFLEYIAALSWASTKTRQLPSSETFSSLKQSEKNNELN SNYKTVKESIELGLKHFLFINMRRELVALASLLILSLSNSEDILTPDMEC VLVFDEYDASSITTNTFIGGRRNLWPENEVPYEISADFTTDQRKIIMDSM NYISDKTCIRFTRRRKQFNYLRIYTGDQGCFANLGHNSGRGTHIIHLQSN GCVKFGIIVHELLHILGVDHEQNRHDRDKYVQINWEHIKTEAYSNFWRSL GEKEKATSLPDCKSVGIDQYDNCHSGFRASTFDIEYDFSSIMHYGWNYDE NVSDEGSCRVLVDAHDRAAMYSRNFIGGRSNRWPNGIVPYTXSSSFSSSQ RQTIMDSIQHISDRTCVKFVERTNEANYVXIFTGESGCYANLGYNSGRAR SVLHLQSDGCVYLGIVVHELLHILGFGHEQTRADRDQYVTINWGNIQSGT YSNFWRALGENEAASIHTVEIFSTNGQNTMSLKKSTTARIPNRSGMSNLD AQKTKAAYECQDTVTAQASLLHLQDPQLHLKLLLHLQDPQLHLKLLLHXQ XPQLHLKHLHLQQQLLSLALTNIGIAATINLIVENIGILIKIVKRPASIV VFCENKIADESCXSLKKYCGYSFIRQFCLKGCGKC back to top
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