EMLSAP00000011223, EMLSAP00000011223 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000011223
Unique NameEMLSAP00000011223
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length641
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360RRMcoord: 191..264
e-value: 0.011
score: 24.2
coord: 102..175
e-value: 3.2E-9
score: 46.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 107..172
e-value: 1.7E-11
score: 43.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 190..268
score: 10.07
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 101..179
score: 11.418
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330coord: 86..178
e-value: 3.9E-13
score: 48.8
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330coord: 188..265
e-value: 5.1E-9
score: 35.3
NoneNo IPR availablePANTHERPTHR23189RNA RECOGNITION MOTIF-CONTAININGcoord: 103..269
NoneNo IPR availablePANTHERPTHR23189:SF5RAVER1coord: 103..269
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 103..268

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000011223 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000011223EMLSAT00000011223-707070Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000011223 ID=EMLSAP00000011223|Name=EMLSAP00000011223|organism=Lepeophtheirus salmonis|type=polypeptide|length=641bp
MNIGSSTLLTTSSGSSPSTTDPGHTTPNGLFPSTTYGYHLNEHDKLSLSA
SVGSADEDLESGVGHSSDEDYYSSQDDIKEERMSTYVLNESFKVNVTGSE
QWLCLAKLPMDLEEEEFENICSEFGGMKGYHLIRSDLTGKFKGYALVEYK
TKSASIQAKHILDGHKLRGHTLEADWLTLDRVHETSLHSKCLFVDRLPTD
YRDMGEFRKLFSSVVHPPYCQIAMKNGVIQNWGLVEFQRSQDAERTLLAM
NGYEIIPGSKIRVQYCIPGVHAINVYMSFVNNPMDALSEKKALLEETPST
KVYDQLESLSKQNPWFVQSLQNIMAMNNGGDNHIKXPPKPPASKGDPAQA
ALVLLLAGSVVRSKENKSNDSIASLLQTVIKKLETGVSASNILKSFLPSS
ATDLKSFIADLLVKYDSSQKQQEQLSPPQQRSFFISKPPSPPQHHQTKDP
TLTDLLLQSFQASISKGKCPQXXPPLQQTTTHSRGPIKTSRPVHKIPTVS
KTLSPSNHTKTITQSHITSNLGLYQPRTTPSQTYAVYAAPQMQPYRPASQ
PIFSPATSFYPGLWPASRMSFPLNVVTAPQWATSGVMPMINAMESTNGSP
YLAGPPVTYPAVVGQNGSKRKFESPFYGEALTKKVKLNEGV
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