EMLSAP00000005595, EMLSAP00000005595 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000005595
Unique NameEMLSAP00000005595
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length700
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 460..506
NoneNo IPR availableCOILSCoilCoilcoord: 272..295
NoneNo IPR availablePANTHERPTHR13856VHS DOMAIN CONTAINING PROTEIN FAMILYcoord: 1..577
IPR017073Ubiquitin binding protein, Hrs/VPS27PIRSFPIRSF036956Hrs_Vps27coord: 1..700
e-value: 1.3E-198
score: 669.1
IPR018205VHS subgroupSMARTSM00288VHScoord: 12..143
e-value: 9.7E-44
score: 161.3
IPR000306FYVE zinc fingerSMARTSM00064FYVEcoord: 159..225
e-value: 9.5E-26
score: 101.5
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 168..222
e-value: 5.3E-16
score: 58.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 160..222
e-value: 1.1E-20
score: 72.8
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 8..148
e-value: 4.2E-45
score: 152.9
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 5..148
IPR002014VHSPFAMPF00790VHScoord: 10..143
e-value: 8.0E-39
score: 132.3
IPR002014VHSPROSITEPS50179VHScoord: 19..147
score: 38.842
IPR024641Hepatocyte growth factor-regulated tyrosine kinase substrate, helical domainPFAMPF12210Hrs_helicalcoord: 400..494
e-value: 4.0E-38
score: 129.4
IPR027426Hepatocyte growth factor-regulated tyrosine kinase substratePANTHERPTHR13856:SF45HEPATOCYTE GROWTH FACTOR-REGULATED TYROSINE KINASE SUBSTRATE (HGS)coord: 1..577
IPR003903Ubiquitin interacting motifPROSITEPS50330UIMcoord: 272..291
score: 10.74
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 164..224
score: 13.822
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 167..223

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000005595 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000005595EMLSAT00000005595-701442Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000005595 ID=EMLSAP00000005595|Name=EMLSAP00000005595|organism=Lepeophtheirus salmonis|type=polypeptide|length=700bp
MNCNMFRGTSNFDRLLEKCTSQMNMEMDWTSIMNLCDSIRSGETNPKYAV
LQIKKKFTHANPHVSLFALQVMESCVKNCGSFIHEEIATREFMEEIRELV
KATKDDAMKGKLLEMIQTWGHAFSKSQKYRICTDTYNIMKAEGWKFPPVV
EADAMFEADTAPAWVEGTVCHRCRVEFGVMTRQHHCRACGQVFCSKCSSK
SCNLPKFGIEKEVRVCESCFDTHGPKDHISPINKSGRMAGNTEDLPPEYL
SSSLAQQNQTPTKTGKSEAEIKEEEELQLAIALSKSEAEEKEKNKYRSSA
IQNNSNNYNDSKSESSSKLPENEIDPELMRYLDRDFWEMKEKEKAKNNNQ
MQQHLQQQQISNTKKEMINKVDLEVDSEIDTLEIQKASESSSKESLEIQD
FITTLKTQVEIFVNRMKSNSSRGRSITNDSSVQTLFMNTMSMHSQLLRYI
QAQEDKRVYYEGLQDKLVQVKDARAALNALRDEERERKRREAEEAERIRQ
AQMQEKLEVMRKQKQEFLQYQRQVALQRMQEQEREMILRQEQSQHQMYMG
VNPPPQAPQVYGMWPQQVGQPPNAMPFYPQQGYPDPYNMQMMGGALPNMG
QPQSSFNSSAVQQTQPQPPMGNIMPSQSNIPGIHSSNPQQPPPPMQASIP
SPSPHIQANLPPHSQLQSIIPGAHNVAPATSLPPHPPPEKPLEAELISFD
back to top
Add to Basket