Submitted by Heidi Kongshaug on
EMLSAG00000011947 has several mistakes, which I have revealed by RACE PCR
It has an additional insert + the ending is wrong.
How to report it?
In "New Genome Annotation Erratum" the only evidence assay is RNA seq, and it is compulsory.
Or should I report it somewhere else?
Edit by Admin:
I have added a screenshot of the gene-model resulting from a GMAP alignment of the race product.
The exon/intron borders are in line with the newer RNA-seq evidence, but where not visible from the
first round of RNA-seq. Also, the race product seems to contain two different polyA tails, and therefore
possibly - at least - two isoforms with different 3'-UTR exist, which doesn't affect the coding sequence fortunately,
while the different exon boundaries and start do change the CDS.
Note: name of race product contains a typo: should be EMLSAT 11947 not 11941:
Attachment | Size |
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11947_5_3_race complete.txt | 1.75 KB |
Screen Shot 2014-11-19 at 08.42.06 AM.png | 52.2 KB |