snap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1, snap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1
Unique Namesnap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold825_size91437supercontigscaffold825_size91437:71548..75607 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
conserved hypothetical proteinsnap_masked-scaffold825_size91437-processed-gene-0.5Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1:exon:924snap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1:exon:924Tigriopus kingsejongensisexon
snap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1:exon:925snap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1:exon:925Tigriopus kingsejongensisexon
snap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1:exon:926snap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1:exon:926Tigriopus kingsejongensisexon
snap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1:cdssnap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1:cdssnap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1:cds-1986096Tigriopus kingsejongensisexon
snap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1:cdssnap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1:cds-1986097Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1986098auto1986098Tigriopus kingsejongensispolypeptide
Tk05922Tk05922Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk05922

>Tk05922 ID=Tk05922|Name=Tk05922|organism=Tigriopus kingsejongensis|type=polypeptide|length=135bp
MQPSTRPKAAAKKSRLCQYAADWAQKLADEDRFDHRPNSKFGENLYMAYN
SNPNAKIPGSSPVDNWYSEAEDHPFGAEPRSMSTGHFTQVVWKGSKELGI
AMARSRSGKVIVVANYQPAGNYIGSYADNVPAPRE
back to top

mRNA from alignment at scaffold825_size91437:71548..75607+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1 ID=snap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1|Name=snap_masked-scaffold825_size91437-processed-gene-0.5-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4060bp|location=Sequence derived from alignment at scaffold825_size91437:71548..75607+ (Tigriopus kingsejongensis)
ATGCAACCCTCAACCAGACCCAAAGCCGCAGCAAAAAAGTCCAGAGTGGG
AAAGGCCGCAACCAAACTGCTGTTTCCCTCAAACCACCCACAGAAGGAGC
TCTAACGTAAGTACGATATACAGTCCATTTCCAGAGTCTAAACACCCGAC
TTTGGGTTGCGTGATACGAGCTTTCATGAATCTTTGATTTGTACTGTACG
TATCAAAGGTCACTTTTTTCTGTGCTCCTTCATACAGGATAAGTGAACAA
TTCACGATCAGGTCTGAGCCCATTTCAAATTAGTTCGACATCCAGTTTGT
TTAACTGGACCTCTCAGGAACAACTTGAAAGTTGAAAAAAAGTTTGAACA
GGTGTTCTGATGGATGTACTTCTTGTTCCCATACTATAGTAGTTTACGTA
CATTGTACTGTAGGCAAACGCAAGTCTGTGTAACACGGAGAACAATTCAA
GTTACCGGGAAAACGCACAAGTTGAACATCAGCTAATAAAATTTAATTCA
ACAAGAATCTAATAAACGTTTTATGGCTTCAGTATTGAATGCAATCAAGC
GTTTGTATTTTGTAACTCAAGACGCTTACCATCCGAGATTTTCCAAAAAT
CTTAAGCTACCGTCATTTCAAACATCTATTTATGAGTCACAAGAACCCAA
AAAAGCACTGAATCTTCATTGCTTAAACATCTTGGGACGTCAGAGTCGGA
TTTGAGACTTAAAAGCGCTGTAAACAGCAGAAAAAATGACGCTGCAATTA
AAACCACCCAAAAACACTGAAAGGGCTGATTTCCAGCTTAGAAAAGAGTG
AGAACTTGAAAAAGATCAAAAAAAATCGCCAAAGCACCAAAATAGCCCAC
TGATAATAGTCCATCAAGTACCAATGAAACTCACGAACAAATATGAAAAT
TGTAATTAAATTGCCGTTTTGAGGAAATCCAAGCAATTCTCGAAATGAAA
ATAATGAACATATGTACCGCAAAATGAAAGGAAGTCATGAGTGGACTTAA
ATTCAGGAACTATTTCTTTTTGAAGGCTATATATCAAAGGTTAAATATTT
GGAAAGAAAATGAGGACAAGCAGTATTTTCACAAATAGCCAATAATCTGA
CAAGCAGCATCAAGTTACCAATGACGATGAACACACAATTGTGGGAAAAA
CATTGCTAGATCTGTGAAAACCACCAAATTTTGCATCTGGTTAATTAACG
AAACGTTGGAACCACATGGCCCTGGTCAGACGAAGCAAAAAAGTCCGGCT
GAATTTCAATGCAATCCGGCTTGAACCCATTATGTTCTGTAAGTAGTTTG
GACTCAAGCTTTAAGATTTTCAACCACTTTGAATCACTTGCCATCAGTCA
GTGGCTGAAATAATTATTTTTTCCAGCAAACAAACTGATCTCCAGACAAG
CAGATTATTTCCAGCATTTAAGACTAGTTTCAACATTTAAGACTATTTCC
AACATTTATGTCTAGTTCCAGCATTTATGGCTACACTGTATTTCCAGCAT
TAAAGACTATTTCGAGCAGAAAAGGTAGCAAAACGTGTTTACATCAGCCT
GGGAAAAAATTGGTTTGACAGAGCGAGAAGGCATTTGAATATATCTGAGA
TAGTGATGAAAACCCTTTAGGGTGCACGCTTTCCTCAATCCTTCGATCAT
ATCTGCCGATATTAAAAAAAGGGTTTCGTTACATCACTATCCTGGCGACA
TCATACATGGTGCAAAAAAAGCACCATGTACGAGGGGCGTTCAAGCATGG
AGTAGACTGGACTGATAATTCCATGAATGTACAAAGCACATTTTTTTATT
TAATCCTCTTTTTCTACGTAGCTTCCTTCATGCCTAATACACTTGTCCAA
TCTGTCGGCCCACTTCTTGAAGACGAACAGGAACCCATCCTTGCTGAGCT
TGGTCAGGACCCCCTGTACGGCCACTTTCACTTCGTTTTCTGTGTTAAAT
TTCTGTCCAGACAGGTTGATTTTGAGATTGGGGAAGAGGTAAAAGTCGCA
TGGGGCTAAATCAGGAGAATAAGGGGCATGGTAGAGAATCTTGATGGACT
TGGCTGCCATGAAGGCCATGGTGAATTTGCTTGTATGAGGCCTGGCATTG
TCCTGGTGTAAAAGCCAAGAAAGGGAGAAAGAGGGGCACCAGCGCCATCT
AGCGGGGAGCAAGGGAACCAGGAAGGGGCGCGCCGCGTAGAACCCACTCA
TCACAAACACAGAGGCTCTGCTGCGTAGAGCTACTGTGGGCGCCTGCTCG
GTGCTCCTTCGGGGTCGAAGTGCACGCCGGAAAAATACGTGGAATTAAAC
ACCAAATCGATCGGAAACAAAGATATATTGGGAACCACGGAGTGAGGGGG
ATGGAAAACAAAAGAATGAGGCTCGGAAAGCATCTGGGGAACAATGCCCT
CACCCAGAGAGCAGACGGCGGGCAAAGGATATGGGCTCCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTACTTCGGCATAGTCAGA
AATTCGCTGCTAAGAAAACAGAGTACGTCTTAGCTTTCTTAGCAGATGTT
CTAGGTGGGCTGACCAATTCAATTGATCGTCGATATGAAGACCTAGGAAT
GTCATGCTATTTTCCATTCCCTTTCCCTTTAGTTGTTGCATTTTTACTCC
ATTCATAGCCAGTGAAAACGGTAAAACCGAACTTACCTTGGTAAATATCA
TATTTTTAGTCTTAGCAATGTTTAAACGGAGGACGTTTATCGAAAACCAT
TTTGAAAGATCACTTAACATGCTATTGTTTTGCTCACATGTAACTCAGAA
GCTATAAGTAATATTAACCGGGCCTTAATCTCGAAAACCTGAAAAGCCCA
TTTGTTCCCGTCTAAAGGCCTTTAAAAGAACTTATTCCGATTGAAAAAAT
AGAAGGAACAACTTGCGGTCATCTTTACATTCGTAATTGAAACGAAAAAG
AGCAAGCGTTGCAATTATTTCCAAAGACCTGCTGAAACTGACCTAACATT
TATTGCTTCTGCACGAATATTGATAAAAATAGTAAGATTAAACCATGTTT
TTGTTGCCCTGTTGAATCTGAGACGGGACATTACTTTCCTCCGTTGGTAA
ATCAAGGCAAAAACGGAAGATATTTTGTTGAGATTTATATCGTTTTGTAA
CTTTTGGTTGTGCGTTTTGTTTTGTGTGCAATTTTTGTGTTTGGTACAGT
TCTGAAAACAACCCTGATCTGTTTCGTGTTAATGTTAGTGCTTTTGTTAG
GTTGTGTTAAAAATACATTTTAACTTAAAATGTATTGTGTGTTTATTACT
TCTGTGCACATCTGTTGATTTGTAAAGCCTTGTTAACATTTCTTATTATA
TTTTTCCATTTTCTGTTGTTTTGTACAGTTTACAAAATAGTAGATTCCTA
TATCGTTGTTTTGCGTTACTAGCATGTGTATAAACTTATAAATGGCCCAA
ACACTATTGACTACCATTCGGTAGCTAAGCGTTGACTCCCGGGCAACAAC
CAAATTTTACTACGTAGTTTGGTGCACTATTCACCCCCAAATTAGTCAAT
TAGTCCCCAGCTAGCATTTGATGTTATTTGATCTACTTTTAGCTCTGCCA
GTATGCTGCTGATTGGGCTCAAAAACTGGCGGATGAGGATCGATTCGACC
ATCGACCCAATTCTAAATTCGGAGAGAACCTCTACATGGCATACAATTCC
AACCCAAATGCCAAGGTACGACAACGGCTATATTTACTGTAGACTCACTC
GTGGGCTTAAGGGGACTAATTAGTTCTGTGTTCCAGATTCCCGGATCCTC
CCCTGTGGACAATTGGTACTCTGAGGCAGAAGATCACCCGTTCGGAGCCG
AACCCCGGTCCATGTCCACGGGACATTTCACCCAAGTGGTGTGGAAAGGC
TCCAAGGAGCTGGGGATTGCCATGGCCAGATCCAGATCCGGCAAGGTGAT
TGTGGTGGCCAACTATCAACCCGCTGGAAACTATATTGGATCCTACGCCG
ACAATGTGCCAGCTCCGAGGGAATGAGGGGCAGAAGTCATTTTTTTATTT
TTATTCTATA
back to top
Add to Basket