calcitonin gene-related peptide-receptor component protein, snap_masked-scaffold631_size122145-processed-gene-0.26 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of calcitonin gene-related peptide-receptor component protein vs. SwissProt
Match: gi|20532033|sp|O75575.1|RPC9_HUMAN (RecName: Full=DNA-directed RNA polymerase III subunit RPC9; Short=RNA polymerase III subunit C9; AltName: Full=Calcitonin gene-related peptide-receptor component protein; Short=CGRP-RCP; Short=CGRP-receptor component protein; Short=CGRPRCP; Short=HsC17) HSP 1 Score: 68.9366 bits (167), Expect = 1.593e-14 Identity = 54/134 (40.30%), Postives = 76/134 (56.72%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLRE-ERQRQFGGRPGHKATPHRSSGANA--TILLETLAHLEAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVSKCLTSDP 131 MEV + ALLSN EV L + + QR+ G+ H SSG TI ETL ++ C + E + +FL A+K L+++E LQL N P + VE+ L++EE EERL+E QIE LL V+ L ++P Sbjct: 1 MEVKDANSALLSNYEVFQLLTDLKEQRKESGKNKH------SSGQQNLNTITYETLKYISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQLLNHRPVTAVEIQLMVEESEERLTEEQIEALLHTVTSILPAEP 128
BLAST of calcitonin gene-related peptide-receptor component protein vs. SwissProt
Match: gi|182676547|sp|A0JN61.1|RPC9_BOVIN (RecName: Full=DNA-directed RNA polymerase III subunit RPC9; Short=RNA polymerase III subunit C9) HSP 1 Score: 68.5514 bits (166), Expect = 2.573e-14 Identity = 54/134 (40.30%), Postives = 75/134 (55.97%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLRE-ERQRQFGGRPGHKATPHRSSGANA--TILLETLAHLEAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVSKCLTSDP 131 MEV + ALLSN EV L + + QR+ G+ H SSG TI ETL ++ C + E + +FL A+K L+++E LQL N P + VE+ L++EE EERL+E QIE LL V+ L + P Sbjct: 1 MEVKDANAALLSNYEVFQLLTDLKEQRKESGKNKH------SSGQQNLNTITYETLKYISKTPCKHQSPEIVREFLTAMKSHKLTKAEKLQLLNHRPVTAVEIQLMVEESEERLTEEQIEALLHTVTSILPAGP 128
BLAST of calcitonin gene-related peptide-receptor component protein vs. SwissProt
Match: gi|20532031|sp|Q8VHM6.1|RPC9_RAT (RecName: Full=DNA-directed RNA polymerase III subunit RPC9; Short=RNA polymerase III subunit C9; AltName: Full=Calcitonin gene-related peptide-receptor component protein; Short=CGRP-RCP; Short=CGRP-receptor component protein; Short=CGRPRCP) HSP 1 Score: 65.0846 bits (157), Expect = 5.380e-13 Identity = 50/132 (37.88%), Postives = 72/132 (54.55%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLRE-ERQRQFGGRPGHKATPHRSSGANATILLETLAHLEAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVSKCLTSDP 131 MEV + ALLSN EV L + + QR+ G+ H A + I ETL ++ C + + +FL A+K L+++E LQL N P + VE+ L++EE EERL+E QIE LL V+ L + P Sbjct: 1 MEVKDANAALLSNYEVFQLLTDLKEQRKESGKNKHSAGQQNLNA----ITYETLKYISKTPCKNQSPAIVQEFLTAMKSHKLTKAEKLQLLNHRPMTAVEIQLMVEESEERLTEEQIEALLHTVTSILPAGP 128
BLAST of calcitonin gene-related peptide-receptor component protein vs. SwissProt
Match: gi|20532032|sp|O35427.1|RPC9_MOUSE (RecName: Full=DNA-directed RNA polymerase III subunit RPC9; Short=RNA polymerase III subunit C9; AltName: Full=Calcitonin gene-related peptide-receptor component protein; Short=CGRP-RCP; Short=CGRP-receptor component protein; Short=CGRPRCP) HSP 1 Score: 64.6994 bits (156), Expect = 7.965e-13 Identity = 52/132 (39.39%), Postives = 73/132 (55.30%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLRE-ERQRQFGGRPGHKATPHRSSGANATILLETLAHLEAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVSKCLTSDP 131 MEV + ALLSN EV L + + QR+ G+ H A NA I ETL ++ C + + +FL A+K L+++E LQL N P + VE+ L++EE EERL+E QIE LL V+ L + P Sbjct: 1 MEVKDANAALLSNYEVFQLLTDLKEQRKESGKNKHSAG---QQNLNA-ITYETLKYISKTPCRNQSPAIVQEFLTAMKSHKLTKAEKLQLLNHRPMTAVEIQLMVEESEERLTEEQIEALLHTVTSILPAGP 128
BLAST of calcitonin gene-related peptide-receptor component protein vs. SwissProt
Match: gi|20532034|sp|Q60482.1|RPC9_CAVPO (RecName: Full=DNA-directed RNA polymerase III subunit RPC9; Short=RNA polymerase III subunit C9; AltName: Full=Calcitonin gene-related peptide-receptor component protein; Short=CGRP-RCP; Short=CGRP-receptor component protein; Short=CGRPRCP) HSP 1 Score: 63.5438 bits (153), Expect = 1.862e-12 Identity = 49/133 (36.84%), Postives = 70/133 (52.63%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLREER-QRQFGGRPGHKATPHRSSGANATILLETLAHLEAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLI-EECEERLSEAQIERLLEIVSKCLTSDP 131 MEV + ALLSN EV L + + QR+ G+ H A + TI ETL +L C + E + +FL A+K L+++E LQL N P + VE+ L++ E E E QIE LL V+ L ++P Sbjct: 1 MEVKDANSALLSNYEVFQLLTDLKDQRRESGKMKHSAGQQNLN----TITYETLKYLSKTPCRHQSPEIVREFLTAMKSHKLTKAEKLQLLNHRPMTAVEIQLMVEETEERFTEEEQIEALLHTVTHILPAEP 129
BLAST of calcitonin gene-related peptide-receptor component protein vs. SwissProt
Match: gi|74623715|sp|Q9C0Z9.1|RPC9_SCHPO (RecName: Full=DNA-directed RNA polymerase III subunit rpc9; Short=RNA polymerase III subunit C9; AltName: Full=RNA polymerase III subunit C17) HSP 1 Score: 54.6842 bits (130), Expect = 3.806e-9 Identity = 41/126 (32.54%), Postives = 62/126 (49.21%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLREERQRQFGGRPGHKATPHRSSGAN-ATILLETLAHLEAQA-CAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVS 124 M+V+ +++A L+N EV L+E Q R + N TI E L +L +Q C T E D + F L+++E+L + N PSS EL+ IE EER E I +L+E ++ Sbjct: 1 MKVLEARDAYLTNAEVFFHLKEMENEQ-NARTQERGAAQALVCENLRTIQFEILKYLSSQGNCEGLTKERFLDCIAIFNEFELTKAEILVILNNKPSSVPELYACIEGIEERFKEEDIFKLVEKIN 125
BLAST of calcitonin gene-related peptide-receptor component protein vs. SwissProt
Match: gi|347595696|sp|P47076.2|RPC9_YEAST (RecName: Full=DNA-directed RNA polymerase III subunit RPC9; Short=RNA polymerase III subunit C9; AltName: Full=RNA polymerase III subunit C17) HSP 1 Score: 53.5286 bits (127), Expect = 1.376e-8 Identity = 23/68 (33.82%), Postives = 43/68 (63.24%), Query Frame = 0 Query: 57 EAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVS 124 E ++ + E+ ++ + + F L ++E LQ+ NQ+P++ V L+ ++EEC+ R E IE +LEI+S Sbjct: 91 EKSGISKMSDESFAELMTKLNSFKLFKAEKLQIVNQLPANMVHLYSIVEECDARFDEKTIEEMLEIIS 158
BLAST of calcitonin gene-related peptide-receptor component protein vs. nr
Match: gi|957821947|ref|XP_014681313.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC9-like isoform X2 [Priapulus caudatus]) HSP 1 Score: 100.908 bits (250), Expect = 1.587e-24 Identity = 61/133 (45.86%), Postives = 83/133 (62.41%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLREERQRQFGGRPGHKATPHRSSGANATILLETLAHLEAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVSKCL-TSDPS 132 MEV + LLSN EV L+E + + GG+ K H ATI ET+ +LE C+Q ++ + FL AV+PF L+++E LQL NQ P++ VE+ LLIEE EERLSE +IE+LL IV+ L S+PS Sbjct: 1 MEVKSENTLLLSNYEVYSLLKELQSSEKGGKKMRKLQKHL-----ATISYETIKYLEKTPCSQQDAQLVRAFLTAVQPFRLTKAEKLQLLNQRPTTAVEIQLLIEESEERLSEQEIEQLLTIVATTLPGSEPS 128
BLAST of calcitonin gene-related peptide-receptor component protein vs. nr
Match: gi|1168897061|ref|XP_020491164.1| (DNA-directed RNA polymerase III subunit RPC9 [Labrus bergylta]) HSP 1 Score: 96.6709 bits (239), Expect = 9.027e-23 Identity = 58/136 (42.65%), Postives = 80/136 (58.82%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLRE-ERQRQFGGRPGHKATPHRSSGANA--TILLETLAHLEAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVSKCLTSDPSL 133 MEV S A+LSN EV L + + QR+ G+ H S+G TI+ ETL +L C++ + E + +FL + P L+++E LQL N P + VE+ LL+EE EERLSEAQIE L++ VS L DP L Sbjct: 1 MEVKNSSAAMLSNYEVFKLLTDLKEQRKDNGKNKH------STGQQNLNTIMYETLKYLSKTPCSRQSPEVVKEFLNTMMPHKLTKAEKLQLLNHRPQTAVEIQLLVEESEERLSEAQIEELIQTVSAALPGDPEL 130
BLAST of calcitonin gene-related peptide-receptor component protein vs. nr
Match: gi|225706246|gb|ACO08969.1| (Calcitonin gene-related peptide-receptor component protein [Osmerus mordax]) HSP 1 Score: 95.1301 bits (235), Expect = 3.624e-22 Identity = 56/143 (39.16%), Postives = 82/143 (57.34%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLRE-ERQRQFGGRPGHKATPHRSSGANA--TILLETLAHLEAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVSKCLTSDPSLGADEPAD 140 MEV + A+LSN EV L + + QR+ G+ H S+G TI+ ETL +L C++ + + + DFL + P L+++E LQL N P + VE+ L++EE EERLSE QIE L++ V++ L DP PAD Sbjct: 1 MEVKDANAAMLSNYEVFQLLTDLKEQRKDSGKNKH------STGQQNLNTIMYETLKYLSKTPCSRQSPKIMKDFLTTMMPHKLTKAEKLQLLNHRPQTAVEIQLMVEESEERLSEDQIEELIQKVTEVLPGDPEQEGTAPAD 137
BLAST of calcitonin gene-related peptide-receptor component protein vs. nr
Match: gi|524878465|ref|XP_005095918.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC9-like [Aplysia californica]) HSP 1 Score: 94.3597 bits (233), Expect = 7.823e-22 Identity = 56/124 (45.16%), Postives = 77/124 (62.10%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLREERQRQFGGRPGHKATPHRSSGANATILLETLAHLEAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVS 124 MEV + A+LSN EVL L++ + GR K P++ ATI ET+ LE CA HT LS ++A+ P+GL+ +E LQL N PSS VE+ L++EE EERLSE QIE LL++++ Sbjct: 1 MEVKSKNHAMLSNYEVLGLLKDIQ----AGRGQKK--PNKFQTNLATITYETIKCLENWPCAHHTPSGLSAAMKALAPYGLTAAEKLQLINLCPSSAVEIQLIVEESEERLSETQIEELLDLLA 118
BLAST of calcitonin gene-related peptide-receptor component protein vs. nr
Match: gi|1339055426|ref|XP_023716147.1| (DNA-directed RNA polymerase III subunit RPC9-like [Cryptotermes secundus] >gi|1330896379|gb|PNF24917.1| DNA-directed RNA polymerase III subunit RPC9 [Cryptotermes secundus]) HSP 1 Score: 92.0485 bits (227), Expect = 3.030e-21 Identity = 50/131 (38.17%), Postives = 80/131 (61.07%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLREERQRQFGGRPGHKATPHRSSGANATILLETLAHLEAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVSKCLTSDP 131 ME + + A+LSN EVL L+E R +Q G + ATI ET+ +L+ C+Q ++E + +FL+AV+PF L ++E + L N P++ +E+ L++EE EERL++ Q+E+LL+IV C P Sbjct: 1 METINANAAILSNFEVLTLLQELRSQQKRSNTGSQL---------ATITYETIRYLQDTQCSQLSAEIIHNFLKAVEPFKLMKAEKVMLLNNPPTTQLEIQLMVEESEERLTDEQVEQLLQIVVDCKLVQP 122
BLAST of calcitonin gene-related peptide-receptor component protein vs. nr
Match: gi|1207972463|ref|XP_021377013.1| (DNA-directed RNA polymerase III subunit RPC9-like [Mizuhopecten yessoensis] >gi|1205888133|gb|OWF39090.1| DNA-directed RNA polymerase III subunit RPC9 [Mizuhopecten yessoensis]) HSP 1 Score: 92.8189 bits (229), Expect = 3.329e-21 Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLREERQRQFGGRPGHKATPHRSSGANATILLETLAHLEAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVSK 125 ME++ A+L+N EVL L + + GR G K P +S ATI E + +LE + C + E + F++ V+P+ L++SE +QL NQ PS+ VE+ L++EE EERL+E QI LLE++ K Sbjct: 1 MEIIKDNAAMLTNYEVLTLLSDIQ----AGR-GQKK-PDKSLQQLATITYEAVKYLEDKPCKTQSPEIIEQFMKDVQPYKLTKSEKVQLLNQYPSTAVEIQLIVEESEERLTEDQIYELLEVIGK 119
BLAST of calcitonin gene-related peptide-receptor component protein vs. nr
Match: gi|961111493|ref|XP_014779074.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC9-like [Octopus bimaculoides] >gi|918307280|gb|KOF79100.1| hypothetical protein OCBIM_22029904mg [Octopus bimaculoides]) HSP 1 Score: 93.2041 bits (230), Expect = 9.313e-21 Identity = 57/140 (40.71%), Postives = 86/140 (61.43%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLREERQRQFGGRPGHKATPHRSSGANATILLETLAHLEAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVSKCLTSDPSLGADEPAD 140 ME++ ALLSN EV L + + GR G ++ P ++ AT+ ET+ +LE+ +C + A+ +F+ + PF L+++E LQL NQ P+ VE+ LLIEE EERL+E Q+ +LL++VSK L D SL E +D Sbjct: 1 MELLNESSALLSNYEVYTLLLDIQ----AGRNG-QSKPTKNQTNLATVTYETVKYLESTSCKHLNAPAVKEFIRHLAPFHLTKAEKLQLLNQRPTMAVEIQLLIEESEERLTETQVYQLLDVVSKYL-PDGSLDLSEESD 134
BLAST of calcitonin gene-related peptide-receptor component protein vs. nr
Match: gi|1242772384|ref|XP_022325697.1| (DNA-directed RNA polymerase III subunit RPC9-like [Crassostrea virginica]) HSP 1 Score: 90.8929 bits (224), Expect = 1.216e-20 Identity = 47/125 (37.60%), Postives = 80/125 (64.00%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLREERQRQFGGRPGHKATPHRSSGANATILLETLAHLEAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVSK 125 MEV++ A+LSN EV L + + GR +K P++ ATI ET+ +LE + C + E++ +F++ ++PF L+++E +Q+ N P++ VE+ L++EE EERL+E QI LLE+++K Sbjct: 1 MEVISENSAMLSNFEVYGLLTDIQ----AGRGQNK--PNKHQQQLATITYETIKYLETKPCKHQSQESIIEFMKELEPFNLTKAEKVQILNLCPTTAVEIQLIVEESEERLTEDQIYSLLEVITK 119
BLAST of calcitonin gene-related peptide-receptor component protein vs. nr
Match: gi|1183363704|gb|ORX90441.1| (calcitonin gene-related peptide-receptor component protein-like protein [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 90.8929 bits (224), Expect = 1.598e-20 Identity = 55/130 (42.31%), Postives = 78/130 (60.00%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLRE---ERQRQFGGRPGHKATPHRSSGANATILLETLAHLEAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVSKCL 127 ME+V ++ ALLSN EV L+E ER++Q H+ TI E + LE T E L+DFLE++K FGL+++E LQ+ N P S VE+HLLIEECEER S+ ++E L+ +V++ L Sbjct: 1 MEIVQTRSALLSNYEVFSLLKEQENERKQQ---------VQHKHPENLLTIEFEVVQFLEGTPSGTQTPEQLADFLESIKDFGLTKAEKLQILNLRPRSAVEIHLLIEECEERFSQERLEELINLVAEKL 121
BLAST of calcitonin gene-related peptide-receptor component protein vs. nr
Match: gi|1249005488|ref|XP_007254223.2| (DNA-directed RNA polymerase III subunit RPC9 [Astyanax mexicanus]) HSP 1 Score: 91.2781 bits (225), Expect = 2.103e-20 Identity = 56/145 (38.62%), Postives = 79/145 (54.48%), Query Frame = 0 Query: 1 MEVVASQEALLSNLEVLHFLREERQRQFGGRPGHKATPHRSSGAN-ATILLETLAHLEAQACAQHTSEALSDFLEAVKPFGLSESEVLQLANQVPSSDVELHLLIEECEERLSEAQIERLLEIVSKCLTSDPSLGADEPADRPTD 144 MEV + A+LSN EV L E +++ R H + N TI+ ETL +L C+ + E + DFL A+ P L+++E LQL N P + VE+ L++EE EERLSE QIE L++ V++ L DP P D D Sbjct: 21 MEVRDANAAMLSNFEVYQLLIELKEK----RKEMVKNKHSTGQQNLNTIMYETLKYLSKTPCSHQSPENVKDFLTAMLPHKLTKAEKLQLLNHRPKTAVEIQLMVEESEERLSEDQIEELIQKVTEILPGDPQQEEGAPGDAEMD 161 The following BLAST results are available for this feature:
BLAST of calcitonin gene-related peptide-receptor component protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of calcitonin gene-related peptide-receptor component protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 7
BLAST of calcitonin gene-related peptide-receptor component protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold631_size122145:62756..63193- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold631_size122145-processed-gene-0.26 ID=snap_masked-scaffold631_size122145-processed-gene-0.26|Name=calcitonin gene-related peptide-receptor component protein|organism=Tigriopus kingsejongensis|type=gene|length=438bp|location=Sequence derived from alignment at scaffold631_size122145:62756..63193- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'calcitonin gene-related peptide-receptor component protein' has the following synonyms
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