GA20104, maker-scaffold71_size417697-snap-gene-2.16 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of GA20104 vs. L. salmonis genes
Match: EMLSAG00000010008 (supercontig:LSalAtl2s:LSalAtl2s658:26144:68191:1 gene:EMLSAG00000010008 transcript:EMLSAT00000010008 description:"maker-LSalAtl2s658-augustus-gene-0.4") HSP 1 Score: 79.7221 bits (195), Expect = 2.364e-17 Identity = 49/165 (29.70%), Postives = 86/165 (52.12%), Query Frame = 0
Query: 55 EIPKCIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFNCSTIELEAHRD-CRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTND--KFWDRNSCQCLCLPSVTKECSTGYNFDSIDTCINGLV 216
E +C+ RDT+V P P+D + E P V+VPRC+G C + C +PK + + V + + C+ +++E HR CRC C D +C A Q F + C+C+C++ K ++D + W+ ++C C+C + C+ G+ F + TC+ ++
Sbjct: 89 EAHRCLVRDTVVRXPLPDDLIVSEAMPEFVVVPRCTGLCL----DRSGCSCIPKKKRHTKVDVXINVNNSSQVCAEVKIEEHRGPCRCKC--DLKDCHAYQEFDELTCKCRCKEKFGSLKSSCSSDILRHWEEDACDCICDRVI---CADGF-FQDLKTCMCKMI 243
BLAST of GA20104 vs. L. salmonis genes
Match: EMLSAG00000012376 (supercontig:LSalAtl2s:LSalAtl2s906:63861:86606:-1 gene:EMLSAG00000012376 transcript:EMLSAT00000012376 description:"maker-LSalAtl2s906-augustus-gene-0.12") HSP 1 Score: 79.337 bits (194), Expect = 2.481e-17 Identity = 48/167 (28.74%), Postives = 76/167 (45.51%), Query Frame = 0
Query: 44 CSTLDKERIWNEIPKCIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQ----VIAKRGSQTFNCSTIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFD 206
C++ + N C PR ++ LP P + PS V+V RC G CH + + CLP + P+ I + CS ++++ H +C C C+I +C+A QV+ + LC CQC+D E C + + WD + C+P T E G +
Sbjct: 39 CTSPHERGAMNSKASCRPRPRVIRLPWPNSTEVNHMIPSHVIVDRCDGSCH---HRKQSCLPRKVIKKSFPVMFAHCTIHDKTCGKI-CSQVQVDEHLECGCECKIKRHHCNAKQVYRKELCSCQCKDLSEVQACYNSG-RVWDPSK----CIPEETNELEAGERIE 196
BLAST of GA20104 vs. L. salmonis genes
Match: EMLSAG00000000061 (supercontig:LSalAtl2s:LSalAtl2s100:182217:183023:-1 gene:EMLSAG00000000061 transcript:EMLSAT00000000061 description:"augustus_masked-LSalAtl2s100-processed-gene-1.11") HSP 1 Score: 74.3294 bits (181), Expect = 6.244e-16 Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 0
Query: 65 LVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQ-TFN--CSTIELEAHRDCRCGCEIDASN--CSADQ--VFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFDSIDTC 211
L +LP D I PS + RCSG C +C+P + + R SQ +N C ++ +E H DC C C D + C+AD + + C+C+C D + +C R+ K W+ +C C+C S + C TG+ FD +TC
Sbjct: 53 LTNLPALNDNRISRVIPSYALTDRCSGACD-----TLECVPTKIENITVHVMAVMTRYSQGEWNTVCVSLRIEKHLDCSCSCPDDEEHRSCNADPNVYYDASSCKCKCNDRIARTECLRSG-KLWNERNCGCICPQSSWRPCGTGFIFDYRETC 200
BLAST of GA20104 vs. L. salmonis genes
Match: EMLSAG00000006508 (supercontig:LSalAtl2s:LSalAtl2s356:707060:708449:1 gene:EMLSAG00000006508 transcript:EMLSAT00000006508 description:"maker-LSalAtl2s356-augustus-gene-6.30") HSP 1 Score: 73.9442 bits (180), Expect = 6.448e-16 Identity = 52/177 (29.38%), Postives = 83/177 (46.89%), Query Frame = 0
Query: 42 EICSTLDKERIWNEIPKCIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSG-------NHQHKCLPVPKSRYQKPIQVIAKRGSQTFNCSTIELEAHRDCRCGCEIDASNCSAD----QVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCL-PSVTKECSTGYNFD 206
E CS +E I + I C P +T++ L P ++T P+ V V RC G C + N L P+S G+ + CS++ ++ H C CG I A C+ +V++ C+C CRD ++ C + + FW+ +C+C+C P+ C TGY+FD
Sbjct: 23 ETCSAKQQEMILSRILSCRPIETVIPLDYPFNDTYSLMKPTHVSVKRCQGSCFSNNCIAKQIINRNVDVLYFPRSS--------NPDGTISPICSSVIVQDHITCGCGXSIXADECTDTGMDIRVYLPGECRCACRDVSKRGNCLKQGN-FWNFQTCECMCQNPNSWPICPTGYSFD 190
BLAST of GA20104 vs. L. salmonis genes
Match: EMLSAG00000000944 (supercontig:LSalAtl2s:LSalAtl2s1166:164075:170496:-1 gene:EMLSAG00000000944 transcript:EMLSAT00000000944 description:"maker-LSalAtl2s1166-augustus-gene-1.26") HSP 1 Score: 60.077 bits (144), Expect = 1.979e-10 Identity = 39/132 (29.55%), Postives = 67/132 (50.76%), Query Frame = 0
Query: 79 FFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFNCS---TIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFD-EQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFD 206
++P+ V V RC+G C H L +++ I + R +Q N I + H+ C C C + +C ++QV+ ++ C+C C+ D E+ +C ++ W+ + C C CL V EC+TG +FD
Sbjct: 108 YYPTCVRVERCNGCC------SHNLLSC-QAKESGTIDITIMRANQRTNSVEYLKIPVIQHKTCSCDCIVKEEDCLSNQVYKRSDCRCACKATDTEKLECISQGNRIWNPHKCFCQCL--VVFECTTGQSFD 230
BLAST of GA20104 vs. nr
Match: gi|1325269602|ref|XP_023349799.1| (uncharacterized protein LOC111718439 isoform X2 [Eurytemora affinis]) HSP 1 Score: 144.821 bits (364), Expect = 7.080e-38 Identity = 76/226 (33.63%), Postives = 123/226 (54.42%), Query Frame = 0
Query: 2 IFAMAVSTIFLVNAFMVLQHPELRATDG--ETLPNS-TGFQADEICSTLDKERIWNEIPKCIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFN--CSTIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFDSIDT--CINGLVLNAS 220
+ A++ + L+ + + + DG LP++ + DE+C+ +KE++WN +P+C PR+ LV +P P D ++F PS V VPRC+G CH G H+C S+ + P+ +I + QT C+T+++E H C CGC + C +Q F + C C+C+D +C +K WD C C C P KEC+TG+++D + T C+ G L+AS
Sbjct: 7 VLAISTYALLLLYPSHRWEREGIGSVDGAFNILPDTWSEIGQDEVCTDTEKEKVWNSLPECTPRNILVRVPFPPDPDTIQFIPSLVEVPRCAGTCHQEGQLYHRCAANETSQREIPV-IIERVSGQTTEEICTTVKVEIHLSCNCGCRKET--CHGNQEFNEKSCSCRCKDAGAMGQCLVQYNKIWDGERCLCRCRPEEWKECNTGFSYDGVYTCQCLPGPPLSAS 229
BLAST of GA20104 vs. nr
Match: gi|1325269600|ref|XP_023349798.1| (uncharacterized protein LOC111718439 isoform X1 [Eurytemora affinis]) HSP 1 Score: 144.436 bits (363), Expect = 7.762e-38 Identity = 76/226 (33.63%), Postives = 123/226 (54.42%), Query Frame = 0
Query: 2 IFAMAVSTIFLVNAFMVLQHPELRATDG--ETLPNS-TGFQADEICSTLDKERIWNEIPKCIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFN--CSTIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFDSIDT--CINGLVLNAS 220
+ A++ + L+ + + + DG LP++ + DE+C+ +KE++WN +P+C PR+ LV +P P D ++F PS V VPRC+G CH G H+C S+ + P+ +I + QT C+T+++E H C CGC + C +Q F + C C+C+D +C +K WD C C C P KEC+TG+++D + T C+ G L+AS
Sbjct: 7 VLAISTYALLLLYPSHRWEREGIGSVDGAFNILPDTWSEIGQDEVCTDTEKEKVWNSLPECTPRNILVRVPFPPDPDTIQFIPSLVEVPRCAGTCHQEGQLYHRCAANETSQREIPV-IIERVSGQTTEEICTTVKVEIHLSCNCGCRKET--CHGNQEFNEKSCSCRCKDAGAMGQCLVQYNKIWDGERCLCRCRPEEWKECNTGFSYDGVYTCQCLPGPPLSAS 229
BLAST of GA20104 vs. nr
Match: gi|1325258506|ref|XP_023325945.1| (uncharacterized protein LOC111699481 [Eurytemora affinis]) HSP 1 Score: 95.5153 bits (236), Expect = 3.821e-19 Identity = 61/197 (30.96%), Postives = 104/197 (52.79%), Query Frame = 0
Query: 56 IPKCIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTF----NCSTIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFDSIDTCINGLVLNASKTQPMFGGNIKTKDLGALSIDVNVVTVN 248
I C PRD +V LP P I + P+ V+V +C+GGC + CLP + + P+ ++AK G C++IE+E H +C+C C + +C+ Q FV + C C+C + +E+ +C + K W+ +SC+C C P+ +CS G + D + TC+ +++ ++ + N++ L L I V TV
Sbjct: 36 IAGCEPRDVVVQLPWPNHTDIQQMTPTHVLVKQCTGGC---TPLEPSCLPSTVHKLRVPV-LVAKCGISLGMCDKECASIEIEEHTECKCACALSPIDCTERQQFVSSECACKCTNTNERRECYESG-KVWNPSSCECTC-PA--HKCSLGAHLDEL-TCMCAAIVDFNERSLLNLSNVELMSLEVLIIIFLVSTVT 223
BLAST of GA20104 vs. nr
Match: gi|1325306654|ref|XP_023334938.1| (uncharacterized protein LOC111706322 [Eurytemora affinis]) HSP 1 Score: 93.9745 bits (232), Expect = 9.205e-19 Identity = 57/174 (32.76%), Postives = 83/174 (47.70%), Query Frame = 0
Query: 44 CSTLDKERIWNEIPKCIPRDTLVSLPP--PEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAK---RGSQTFNCSTIELEAHRDCRCGCEIDASNCSAD-QVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFDSIDTC 211
C+ +++RI N +P C RDT+V L P ++E PS +V RC GGC+L H C P + + ++ +G CS ++ +DC C C I A +C D Q + C+C C + +E+ C D WD SC C C + CSTGY FD +C
Sbjct: 54 CTGREQKRILNNMPACQVRDTVVDLRPIFSNRSNVVEVIPSHAVVGRCGGGCNLP---HHTCQPRTSVLTKMEVMLVLDVWPQGEHEVVCSQAWVQEDQDCTCDCRIRAEHCLPDVQQYNAQACRCVCTNVEERTACLE-RDMIWDPYSCSCSCPRHTLQHCSTGYVFDLSKSC 223
BLAST of GA20104 vs. nr
Match: gi|1325308268|ref|XP_023335748.1| (uncharacterized protein LOC111707006 [Eurytemora affinis]) HSP 1 Score: 90.5077 bits (223), Expect = 6.191e-18 Identity = 57/184 (30.98%), Postives = 86/184 (46.74%), Query Frame = 0
Query: 33 PNSTGFQADEICSTLDKERIWNEIPK--CIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIA---KRGSQTFNCSTIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFDSIDTC 211
P TG E CS+ E +WN+ + C R ++L ++ PSQ +V RC G C LS +H C P + +I+ G + C T + C CGC + +C+ Q + C+C C+++ +N C + DK+WD SC CLC + CSTGY FD ++C
Sbjct: 20 PEYTGI---EECSSETMESVWNQTRQTSCQLRHVTINLDASNHTGTVQVIPSQTVVKRCGGSC-LSPSH--SCYPTSSTMVSVEAMIISTSWNEGEWSTLCQTFRVREDTACACGCTVRPEDCTVHQYYQPQACKCICKNWKLRNSCV-SQDKYWDTESCTCLCKN--WRSCSTGYLFDGQNSC 194
BLAST of GA20104 vs. nr
Match: gi|198469753|ref|XP_001355114.2| (uncharacterized protein Dpse_GA20104, isoform A [Drosophila pseudoobscura pseudoobscura] >gi|198147018|gb|EAL32171.2| uncharacterized protein Dpse_GA20104, isoform A [Drosophila pseudoobscura pseudoobscura]) HSP 1 Score: 89.7373 bits (221), Expect = 3.178e-17 Identity = 52/166 (31.33%), Postives = 88/166 (53.01%), Query Frame = 0
Query: 46 TLDKERIWNEIPK-CIPRDTLVSLPPPEDETI---LEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFNCSTIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKC-QRTNDKFWDRNSCQCLCLPSVTKECSTGYNFD 206
++ + I N P C P+ T+V L PP DE + + P+ + RC+G C G+ C P + Q ++ + G+ + I +E H CRC C I A +C+A Q++ + LC+C+C++ D ++KC ++ + K+WD +C C C + C+TG FD
Sbjct: 125 SVTRSAIRNAQPAICSPQPTIVELKPPSDEAGNFNVYYTPACTRINRCNGCC---GSTLISCQPTQTEKVQMRVRKFERGGTSKRSSEIIVVEQHLACRCDCRIKAEDCNAYQLYRRELCRCECQNTDARDKCLEQADSKYWDDANCTCAC--RYNQSCTTGTVFD 285
BLAST of GA20104 vs. nr
Match: gi|1036729267|ref|XP_017149466.1| (PREDICTED: vascular endothelial growth factor C [Drosophila miranda]) HSP 1 Score: 89.7373 bits (221), Expect = 3.584e-17 Identity = 52/166 (31.33%), Postives = 88/166 (53.01%), Query Frame = 0
Query: 46 TLDKERIWNEIPK-CIPRDTLVSLPPPEDETI---LEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFNCSTIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKC-QRTNDKFWDRNSCQCLCLPSVTKECSTGYNFD 206
++ + I N P C P+ T+V L PP DE + + P+ + RC+G C G+ C P + Q ++ + G+ + I +E H CRC C I A +C+A Q++ + LC+C+C++ D ++KC ++ + K+WD +C C C + C+TG FD
Sbjct: 125 SVTRSAIRNAQPAICSPQPTIVELKPPSDEAGNFNVYYTPACTRINRCNGCC---GSTLISCQPTQTEKVQMRVRKFERGGTAKRSSEIIVVEQHLACRCDCRIKAEDCNAYQLYRRELCRCECQNTDARDKCLEQADSKYWDDANCTCAC--RYNQSCTTGTVFD 285
BLAST of GA20104 vs. nr
Match: gi|1108463476|emb|CRL08719.1| (CLUMA_CG021292, isoform A [Clunio marinus]) HSP 1 Score: 90.8929 bits (224), Expect = 4.051e-17 Identity = 58/194 (29.90%), Postives = 94/194 (48.45%), Query Frame = 0
Query: 59 CIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFNC---STIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNFDSIDTCINGLVLNASKTQ--PMFGGNIKTKDLGALSIDVNVVTV 247
C P DT+VSL E + + +FPS V++ +C G C SG C P+ ++ Q I+ G F T+ ++ H C+C C+ AS+C++ Q F+ C+C+C + E C + K +D SC C+C TKEC+TG +D + + +Q FG ++ T+ G + D T+
Sbjct: 236 CQPIDTVVSLVQDERDPTVFYFPSCVLMKQCGGCCAHSGT---TCSPIEETDKQITIKKTKFSGGSKFQSLGDVTVTVKEHNRCKCQCKKTASSCNSLQKFIANQCRCECINIAEAESCTQDPTKLFDTKSCACVCRD--TKECATGLQYDQSSCSCQPITFDDEDSQDFQFFGDHMDTEAYGVETDDTKYETI 424
BLAST of GA20104 vs. nr
Match: gi|1325258493|ref|XP_023325911.1| (uncharacterized protein LOC111699457 [Eurytemora affinis]) HSP 1 Score: 90.8929 bits (224), Expect = 4.172e-17 Identity = 55/169 (32.54%), Postives = 86/169 (50.89%), Query Frame = 0
Query: 41 DEICSTLDKERIWNEIPKCIPRDTLVSLPPPEDETILEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTF----NCSTIELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKCQRTNDKFWDRNSCQCLCLPSVTKECSTGYNF 205
+++C+ ++ + C+PRDT+V LP + P+ V + RC GGCH G H CLP + P+ +IAK G + C++IELE H +C C C++ +C+ +Q F LC CQC D + C + WD +SC C C + ++C+ G F
Sbjct: 36 NQLCNPKHMQKALSSAESCMPRDTVVELPWLNISDSAQITPTHVSIKRCDGGCHQLG---HACLPRTVEMVRIPV-MIAKCGIDSGICDKACASIELEEHTECACSCQLRPGDCNENQDFRPDLCSCQCLDILGRQSC-LDRGRSWDESSCTCGC--PLHQQCAPGLVF 197
BLAST of GA20104 vs. nr
Match: gi|1037105081|ref|XP_017107442.1| (PREDICTED: uncharacterized protein LOC108132511 [Drosophila bipectinata] >gi|1037105089|ref|XP_017107443.1| PREDICTED: uncharacterized protein LOC108132511 [Drosophila bipectinata]) HSP 1 Score: 89.3521 bits (220), Expect = 5.142e-17 Identity = 54/164 (32.93%), Postives = 86/164 (52.44%), Query Frame = 0
Query: 47 LDKERIWNEIP-KCIPRDTLVSLPPPEDETI-LEFFPSQVMVPRCSGGCHLSGNHQHKCLPVPKSRYQKPIQVIAKRGSQTFNCSTI-ELEAHRDCRCGCEIDASNCSADQVFVQTLCQCQCRDFDEQNKC-QRTNDKFWDRNSCQCLCLPSVTKECSTGYNFD 206
+ + I N P C P+ T+V L PP E++ +FPS + RCSG C G+ C P Q ++ + + G+ + I ++E H CRC C I +C+A Q + Q LC+C+C + D ++KC ++ + K+WD +C C C + C+TG FD
Sbjct: 132 VTRAAIRNATPASCSPQPTIVELKPPGTESVNFYYFPSCTRINRCSGCC---GSTLISCQPTETEIVQLRVRKVDRSGAGPRRLTAIVDVEQHLACRCDCRIKEGDCNAYQSYRQELCRCECHNTDAKDKCLEQPDTKYWDDANCTCAC--RYNQSCTTGTVFD 290 The following BLAST results are available for this feature:
BLAST of GA20104 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 5
BLAST of GA20104 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of GA20104 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold71_size417697:192251..211992- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold71_size417697-snap-gene-2.16 ID=maker-scaffold71_size417697-snap-gene-2.16|Name=GA20104|organism=Tigriopus kingsejongensis|type=gene|length=19742bp|location=Sequence derived from alignment at scaffold71_size417697:192251..211992- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'GA20104' has the following synonyms
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