muscle lim protein mlp84b, maker-scaffold452_size166894-snap-gene-0.43 (gene) Tigriopus kingsejongensis

Overview


Name	muscle lim protein mlp84b
Unique Name	maker-scaffold452_size166894-snap-gene-0.43
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of muscle lim protein mlp84b vs. L. salmonis genes
Match: EMLSAG00000008661 (supercontig:LSalAtl2s:LSalAtl2s537:22793:23575:-1 gene:EMLSAG00000008661 transcript:EMLSAT00000008661 description:"maker-LSalAtl2s537-augustus-gene-0.11")

HSP 1 Score: 78.1814 bits (191), Expect = 4.990e-20
Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 0

Query:    1 MVWSPK-DPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQN 69
            M WSP     +CPACK+ VYPAE ++A DR PYH+ CV+C+ C   L P +L E D +++C VC++   N
Sbjct:    1 MPWSPPVSTPKCPACKKSVYPAEHVMAADRKPYHKSCVKCIECNIPLNPRTLNEHDEELFCNVCYANLFN 70

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BLAST of muscle lim protein mlp84b vs. L. salmonis genes
Match: EMLSAG00000010186 (supercontig:LSalAtl2s:LSalAtl2s676:246967:250571:1 gene:EMLSAG00000010186 transcript:EMLSAT00000010186 description:"maker-LSalAtl2s676-augustus-gene-2.40")

HSP 1 Score: 50.447 bits (119), Expect = 4.286e-9
Identity = 27/76 (35.53%), Postives = 40/76 (52.63%), Query Frame = 0

Query:    4 SPKDPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQG 79
            +P+ P +CP C R VY AE+ +A     +H+ C +C  C   L   +  E D ++YC+ C  +   HY   GYG G
Sbjct:    5 APESP-KCPKCGRSVYAAEEKVAGG-LKWHKACFKCETCNKLLDSTTCAEHDKKLYCKTCHGR---HYGPKGYGFG 75

HSP 2 Score: 46.595 bits (109), Expect = 8.357e-8
Identity = 30/73 (41.10%), Postives = 38/73 (52.05%), Query Frame = 0

Query:   11 CPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDG---QIYCRVCFSKFQNHYAQNGYGQGQ 80
            CP C   VY A+Q+ +  R  +H+ C +C  C   L   SLT  DG    IYC+VC+ K    Y   GYG GQ
Sbjct:  113 CPRCGAYVYHADQVFSKGRA-WHKFCFKCSACSRVLD--SLTACDGPDKNIYCKVCYRK---SYGIQGYGFGQ 179

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BLAST of muscle lim protein mlp84b vs. L. salmonis genes
Match: EMLSAG00000000389 (supercontig:LSalAtl2s:LSalAtl2s1062:164646:204460:1 gene:EMLSAG00000000389 transcript:EMLSAT00000000389 description:"maker-LSalAtl2s1062-augustus-gene-2.14")

HSP 1 Score: 48.1358 bits (113), Expect = 2.462e-8
Identity = 22/69 (31.88%), Postives = 36/69 (52.17%), Query Frame = 0

Query:   11 CPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQG 79
            CP C R V+ AE +    +  +H+ C  C  C   +   +L E+DG I+C+ C+ K   ++   G+G G
Sbjct:  525 CPRCNRSVFIAELMRGAGKA-WHKSCFTCNICNKRVDSSNLCERDGDIFCKACYGK---NFGPKGFGFG 589

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BLAST of muscle lim protein mlp84b vs. L. salmonis genes
Match: EMLSAG00000010526 (supercontig:LSalAtl2s:LSalAtl2s69:245581:253280:1 gene:EMLSAG00000010526 transcript:EMLSAT00000010526 description:"augustus_masked-LSalAtl2s69-processed-gene-2.3")

HSP 1 Score: 48.1358 bits (113), Expect = 2.618e-8
Identity = 26/69 (37.68%), Postives = 39/69 (56.52%), Query Frame = 0

Query:    1 MVWSPKDPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEK-DGQIYCRVCFSKFQ 68
            ++  P +  RCP C+  V+ AE++IA     YHR C RC  C   L   S+ +  D +IYCRVC+ + +
Sbjct:  326 IMGEPGEKERCPRCEGKVFAAEKMIAASGW-YHRHCFRCFVCCVPLDSTSVCDGPDSKIYCRVCYGRVR 393

HSP 2 Score: 46.595 bits (109), Expect = 7.900e-8
Identity = 27/85 (31.76%), Postives = 40/85 (47.06%), Query Frame = 0

Query:    4 SPKDPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSL-TEKDGQIYCRVCFSKFQNHYAQNGYGQGQMSDEERS 87
            SP D + CP C   V+ AE+I    +  YH+ C  C+ C   L    +   KD  IYC+ C+S+        G G G  +D + +
Sbjct:  501 SPSDENTCPRCSGKVFHAEKISVKGKL-YHKKCSTCLNCTKPLVQSDIFVGKDEDIYCKACYSRKFGAPGYRGAGCGDWTDHDSA 584

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BLAST of muscle lim protein mlp84b vs. SwissProt
Match: gi|1705934|sp|P50462.1|CSRP3_MOUSE (RecName: Full=Cysteine and glycine-rich protein 3; AltName: Full=Cysteine-rich protein 3; Short=CRP3; AltName: Full=LIM domain protein, cardiac; AltName: Full=Muscle LIM protein)

HSP 1 Score: 60.8474 bits (146), Expect = 6.700e-12
Identity = 26/78 (33.33%), Postives = 48/78 (61.54%), Query Frame = 0

Query:    7 DPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQGQMSDE 84
            +  +CP C + VY AE+++   + P+H+ C RC  C   L   ++T+KDG++YC+VC++K   ++   G G G ++ +
Sbjct:  116 ESEKCPRCGKSVYAAEKVMGGGK-PWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAK---NFGPTGIGFGGLTQQ 189

HSP 2 Score: 50.0618 bits (118), Expect = 7.460e-8
Identity = 24/71 (33.80%), Postives = 40/71 (56.34%), Query Frame = 0

Query:   10 RCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQGQ 80
            +C AC++ VY AE+I    R+ +H+ C  C+ C+  L   ++   + +IYC+VC+ +    Y   G G GQ
Sbjct:    9 KCGACEKTVYHAEEIQCNGRS-FHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGR---RYGPKGIGFGQ 75

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BLAST of muscle lim protein mlp84b vs. SwissProt
Match: gi|1705933|sp|P50461.1|CSRP3_HUMAN (RecName: Full=Cysteine and glycine-rich protein 3; AltName: Full=Cardiac LIM protein; AltName: Full=Cysteine-rich protein 3; Short=CRP3; AltName: Full=LIM domain protein, cardiac; AltName: Full=Muscle LIM protein)

HSP 1 Score: 60.8474 bits (146), Expect = 6.988e-12
Identity = 26/78 (33.33%), Postives = 48/78 (61.54%), Query Frame = 0

Query:    7 DPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQGQMSDE 84
            +  +CP C + VY AE+++   + P+H+ C RC  C   L   ++T+KDG++YC+VC++K   ++   G G G ++ +
Sbjct:  116 ESEKCPRCGKSVYAAEKVMGGGK-PWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAK---NFGPTGIGFGGLTQQ 189

HSP 2 Score: 50.447 bits (119), Expect = 5.474e-8
Identity = 24/71 (33.80%), Postives = 40/71 (56.34%), Query Frame = 0

Query:   10 RCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQGQ 80
            +C AC++ VY AE+I    R+ +H+ C  C+ C+  L   ++   + +IYC+VC+ +    Y   G G GQ
Sbjct:    9 KCGACEKTVYHAEEIQCNGRS-FHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGR---RYGPKGIGYGQ 75

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BLAST of muscle lim protein mlp84b vs. SwissProt
Match: gi|118161|sp|P21291.3|CSRP1_HUMAN (RecName: Full=Cysteine and glycine-rich protein 1; AltName: Full=Cysteine-rich protein 1; Short=CRP; Short=CRP1; AltName: Full=Epididymis luminal protein 141; Short=HEL-141)

HSP 1 Score: 60.8474 bits (146), Expect = 7.652e-12
Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 0

Query:   10 RCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSK 66
            RCP C + VY AE++I   ++ +H+ C RC  C  GL   +L +KDG+IYC+ C++K
Sbjct:  118 RCPRCSQAVYAAEKVIGAGKS-WHKACFRCAKCGKGLESTTLADKDGEIYCKGCYAK 173

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BLAST of muscle lim protein mlp84b vs. SwissProt
Match: gi|75061939|sp|Q5RCT4.3|CSRP1_PONAB (RecName: Full=Cysteine and glycine-rich protein 1; AltName: Full=Cysteine-rich protein 1; Short=CRP1)

HSP 1 Score: 60.8474 bits (146), Expect = 7.733e-12
Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 0

Query:   10 RCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSK 66
            RCP C + VY AE++I   ++ +H+ C RC  C  GL   +L +KDG+IYC+ C++K
Sbjct:  118 RCPRCSQAVYAAEKVIGAGKS-WHKACFRCAKCGKGLESTTLADKDGEIYCKGCYAK 173

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BLAST of muscle lim protein mlp84b vs. SwissProt
Match: gi|75077434|sp|Q4U0T9.1|CSRP3_BOVIN (RecName: Full=Cysteine and glycine-rich protein 3; AltName: Full=Cysteine-rich protein 3; Short=CRP3)

HSP 1 Score: 60.8474 bits (146), Expect = 8.714e-12
Identity = 26/78 (33.33%), Postives = 48/78 (61.54%), Query Frame = 0

Query:    7 DPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQGQMSDE 84
            +  +CP C + VY AE+++   + P+H+ C RC  C   L   ++T+KDG++YC+VC++K   ++   G G G ++ +
Sbjct:  116 ESEKCPRCGKSVYAAEKVMGGGK-PWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAK---NFGPTGIGFGGLTHQ 189

HSP 2 Score: 50.8322 bits (120), Expect = 4.988e-8
Identity = 24/71 (33.80%), Postives = 40/71 (56.34%), Query Frame = 0

Query:   10 RCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQGQ 80
            +C AC++ VY AE+I    R+ +H+ C  C+ C+  L   ++   + +IYC+VC+ +    Y   G G GQ
Sbjct:    9 KCGACEKTVYHAEEIQCNGRS-FHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGR---RYGPKGIGYGQ 75

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BLAST of muscle lim protein mlp84b vs. SwissProt
Match: gi|1345932|sp|P47875.2|CSRP1_RAT (RecName: Full=Cysteine and glycine-rich protein 1; AltName: Full=Cysteine-rich protein 1; Short=CRP; Short=CRP1)

HSP 1 Score: 60.4622 bits (145), Expect = 9.444e-12
Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 0

Query:   10 RCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSK 66
            RCP C + VY AE++I   ++ +H+ C RC  C  GL   +L +KDG+IYC+ C++K
Sbjct:  118 RCPRCSQAVYAAEKVIGAGKS-WHKSCFRCAKCGKGLESTTLADKDGEIYCKGCYAK 173

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BLAST of muscle lim protein mlp84b vs. SwissProt
Match: gi|47605401|sp|P97315.3|CSRP1_MOUSE (RecName: Full=Cysteine and glycine-rich protein 1; AltName: Full=Cysteine-rich protein 1; Short=CRP; Short=CRP1)

HSP 1 Score: 60.4622 bits (145), Expect = 9.954e-12
Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 0

Query:   10 RCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSK 66
            RCP C + VY AE++I   ++ +H+ C RC  C  GL   +L +KDG+IYC+ C++K
Sbjct:  118 RCPRCSQAVYAAEKVIGAGKS-WHKSCFRCAKCGKGLESTTLADKDGEIYCKGCYAK 173

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BLAST of muscle lim protein mlp84b vs. SwissProt
Match: gi|82592776|sp|Q3MHY1.3|CSRP1_BOVIN (RecName: Full=Cysteine and glycine-rich protein 1; AltName: Full=Cysteine-rich protein 1; Short=CRP1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.117e-11
Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 0

Query:   10 RCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSK 66
            RCP C + VY AE++I   ++ +H+ C RC  C  GL   +L +KDG+IYC+ C++K
Sbjct:  118 RCPRCSQAVYAAEKVIGAGKS-WHKSCFRCAKCGKGLESTTLADKDGEIYCKGCYAK 173

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BLAST of muscle lim protein mlp84b vs. SwissProt
Match: gi|47605400|sp|P97314.3|CSRP2_MOUSE (RecName: Full=Cysteine and glycine-rich protein 2; AltName: Full=Cysteine-rich protein 2; Short=CRP2; AltName: Full=Double LIM protein 1; Short=DLP-1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.793e-11
Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 0

Query:   10 RCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQGQ 80
            +C  C   VY AE+II   + P+H+ C RC  C   L   +LTEK+G+IYC+ C++K   ++   G+G GQ
Sbjct:  118 KCSRCGDSVYAAEKIIGAGK-PWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAK---NFGPKGFGYGQ 184

HSP 2 Score: 51.2174 bits (121), Expect = 3.370e-8
Identity = 29/79 (36.71%), Postives = 42/79 (53.16%), Query Frame = 0

Query:    2 VWSPKDPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQGQ 80
            VW   +  +C AC R VY AE++    R+ +HR C  C+ C+  L   ++   D +IYC+ C+ K    Y   GYG GQ
Sbjct:    3 VWGGGN--KCGACGRTVYHAEEVQCDGRS-FHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGK---KYGPKGYGYGQ 75

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BLAST of muscle lim protein mlp84b vs. SwissProt
Match: gi|2497674|sp|Q16527.3|CSRP2_HUMAN (RecName: Full=Cysteine and glycine-rich protein 2; AltName: Full=Cysteine-rich protein 2; Short=CRP2; AltName: Full=LIM domain only protein 5; Short=LMO-5; AltName: Full=Smooth muscle cell LIM protein; Short=SmLIM >gi|110808191|sp|Q32LE9.3|CSRP2_BOVIN RecName: Full=Cysteine and glycine-rich protein 2; AltName: Full=Cysteine-rich protein 2; Short=CRP2)

HSP 1 Score: 59.6918 bits (143), Expect = 1.812e-11
Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 0

Query:   10 RCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQGQ 80
            +C  C   VY AE+II   + P+H+ C RC  C   L   +LTEK+G+IYC+ C++K   ++   G+G GQ
Sbjct:  118 KCSRCGDSVYAAEKIIGAGK-PWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAK---NFGPKGFGYGQ 184

HSP 2 Score: 51.2174 bits (121), Expect = 3.233e-8
Identity = 29/79 (36.71%), Postives = 42/79 (53.16%), Query Frame = 0

Query:    2 VWSPKDPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQGQ 80
            VW   +  +C AC R VY AE++    R+ +HR C  C+ C+  L   ++   D +IYC+ C+ K    Y   GYG GQ
Sbjct:    3 VWGGGN--KCGACGRTVYHAEEVQCDGRS-FHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGK---KYGPKGYGYGQ 75

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BLAST of muscle lim protein mlp84b vs. nr
Match: gi|225713544|gb|ACO12618.1| (Muscle LIM protein Mlp84B [Lepeophtheirus salmonis] >gi|290462055|gb|ADD24075.1| Muscle LIM protein Mlp84B [Lepeophtheirus salmonis] >gi|290561326|gb|ADD38065.1| Muscle LIM protein Mlp84B [Lepeophtheirus salmonis])

HSP 1 Score: 78.1814 bits (191), Expect = 4.674e-16
Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 0

Query:    1 MVWSPK-DPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQN 69
            M WSP     +CPACK+ VYPAE ++A DR PYH+ CV+C+ C   L P +L E D +++C VC++   N
Sbjct:    1 MPWSPPVSTPKCPACKKSVYPAEHVMAADRKPYHKSCVKCIECNIPLNPRTLNEHDEELFCNVCYANLFN 70

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BLAST of muscle lim protein mlp84b vs. nr
Match: gi|290462477|gb|ADD24286.1| (Muscle LIM protein Mlp84B [Lepeophtheirus salmonis])

HSP 1 Score: 75.485 bits (184), Expect = 5.130e-15
Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = 0

Query:   10 RCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQN 69
            +CPACK+ VYPAE ++A DR PYH+ CV+C+ C   L P +L E D +++C VC++   N
Sbjct:   11 KCPACKKSVYPAEHVMAADRKPYHKSCVKCIECNIPLNPRTLNEHDEELFCNVCYANLFN 70

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BLAST of muscle lim protein mlp84b vs. nr
Match: gi|225709430|gb|ACO10561.1| (Muscle LIM protein Mlp84B [Caligus rogercresseyi])

HSP 1 Score: 74.3294 bits (181), Expect = 1.430e-14
Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 0

Query:    1 MVWSP-KDPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQN 69
            M W+P     +CPAC++ VY AEQ++A DR PYH+ CV+C+ C   L P +L E D +++C VC++   N
Sbjct:    1 MPWNPPTTAPKCPACQKSVYTAEQVMAADRKPYHKSCVKCIECNIPLNPRTLNEHDEELFCNVCYTNIFN 70

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BLAST of muscle lim protein mlp84b vs. nr
Match: gi|225709210|gb|ACO10451.1| (Muscle LIM protein Mlp84B [Caligus rogercresseyi])

HSP 1 Score: 74.3294 bits (181), Expect = 1.461e-14
Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 0

Query:    1 MVWSP-KDPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQN 69
            M W+P     +CPAC++ VY AEQ++A DR PYH+ CV+C+ C   L P +L E D +++C VC++   N
Sbjct:    1 MPWNPPTTAPKCPACQKSVYTAEQVMAADRKPYHKSCVKCIECNIPLNPRTLNEHDEELFCNVCYTNIFN 70

[Close]

BLAST of muscle lim protein mlp84b vs. nr
Match: gi|1325279013|ref|XP_023324155.1| (cysteine and glycine-rich protein 1-like [Eurytemora affinis])

HSP 1 Score: 74.3294 bits (181), Expect = 2.146e-14
Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 0

Query:    1 MVWSPK-DPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKF--QNHYAQNGYG 77
            M W+P     RCPACK  V+PAE ++A DR P+H+ CV+CV CK  L P ++ E   Q++C+ C+ +      Y    YG
Sbjct:    1 MPWNPAPTAPRCPACKTSVFPAEAVMAADRKPFHKQCVKCVKCKKSLNPSTINEHKNQLFCKNCYDEIYMPQEYCSGTYG 80

[Close]

BLAST of muscle lim protein mlp84b vs. nr
Match: gi|1325279011|ref|XP_023324154.1| (cysteine and glycine-rich protein 1-like [Eurytemora affinis])

HSP 1 Score: 72.7886 bits (177), Expect = 6.355e-14
Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 0

Query:    1 MVWSPK-DPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKF--QNHYAQNGYG 77
            M W+P     RCPAC   V+PAE ++A DR P+H+ CV+CV CK  L P ++ E   Q++C+ C+ +      Y    YG
Sbjct:    1 MPWNPAPTAPRCPACNTSVFPAEAVMAADRKPFHKQCVKCVKCKKSLNPSTINEHKNQLFCKNCYDEIYMPQEYCSGTYG 80

[Close]

BLAST of muscle lim protein mlp84b vs. nr
Match: gi|556978453|ref|XP_005996295.1| (PREDICTED: cysteine and glycine-rich protein 3 [Latimeria chalumnae])

HSP 1 Score: 68.1662 bits (165), Expect = 4.022e-12
Identity = 31/76 (40.79%), Postives = 49/76 (64.47%), Query Frame = 0

Query:   10 RCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQGQMSDEE 85
            RCP C +PVY AE+I+   + P+H+ C RC  C   L   ++T+KDG+IYC+VC++K   ++   G G G +++ E
Sbjct:  118 RCPRCGKPVYAAEKIMGGGK-PWHKTCFRCALCGKSLESTTVTDKDGEIYCKVCYAK---NFGPKGVGFGGLANAE 189

HSP 2 Score: 56.225 bits (134), Expect = 1.368e-7
Identity = 27/71 (38.03%), Postives = 41/71 (57.75%), Query Frame = 0

Query:   10 RCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQGQ 80
            +C AC+R VY AE+I    R+ +H+ C  C+ C+ GL   ++   + +IYC+ C+ K    Y   GYG GQ
Sbjct:    9 KCAACERTVYHAEEIQCNGRS-FHKTCFLCMACRKGLDSTTVAAHESEIYCKTCYGK---KYGPKGYGYGQ 75

[Close]

BLAST of muscle lim protein mlp84b vs. nr
Match: gi|663245252|ref|XP_008503016.1| (PREDICTED: cysteine and glycine-rich protein 3 [Calypte anna])

HSP 1 Score: 64.6994 bits (156), Expect = 7.345e-12
Identity = 29/80 (36.25%), Postives = 49/80 (61.25%), Query Frame = 0

Query:    7 DPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQGQMSDEER 86
            D  +CP C + VY AE+I+   + P+H+ C RC  C   L   ++T+KDG++YC+VC++K   ++   G G G ++  E+
Sbjct:    3 DVDKCPRCGKSVYAAEKIMGGGK-PWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAK---NFGPKGIGFGGLTQAEK 78

[Close]

BLAST of muscle lim protein mlp84b vs. nr
Match: gi|327259793|ref|XP_003214720.1| (PREDICTED: cysteine and glycine-rich protein 3 [Anolis carolinensis] >gi|1033387126|ref|XP_016848214.1| PREDICTED: cysteine and glycine-rich protein 3 [Anolis carolinensis] >gi|1033387128|ref|XP_016848215.1| PREDICTED: cysteine and glycine-rich protein 3 [Anolis carolinensis])

HSP 1 Score: 66.6254 bits (161), Expect = 1.492e-11
Identity = 31/80 (38.75%), Postives = 49/80 (61.25%), Query Frame = 0

Query:    7 DPHRCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQGQMSDEER 86
            D  +CP C + VY AE+I+   + P+H+ C RC  C   L   ++T+KDG+IYC+VC++K   ++   G G G ++  ER
Sbjct:  116 DVEKCPRCGKSVYAAEKIMGGGK-PWHKTCFRCAICGKSLESTNVTDKDGEIYCKVCYAK---NFGPKGIGHGGLTQVER 191

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BLAST of muscle lim protein mlp84b vs. nr
Match: gi|1048432314|ref|XP_017532426.1| (PREDICTED: cysteine and glycine-rich protein 2-like, partial [Manis javanica])

HSP 1 Score: 65.4698 bits (158), Expect = 1.634e-11
Identity = 30/71 (42.25%), Postives = 45/71 (63.38%), Query Frame = 0

Query:   10 RCPACKRPVYPAEQIIATDRTPYHRMCVRCVGCKTGLTPGSLTEKDGQIYCRVCFSKFQNHYAQNGYGQGQ 80
            +CP C  PVY AE++I   + P+H+ C RC  C   L   +LTEK+G+IYC+ C++K   ++   G+G GQ
Sbjct:   71 KCPRCGGPVYAAEKVIGAGK-PWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAK---NFGPKGFGYGQ 137

The following BLAST results are available for this feature:

BLAST of muscle lim protein mlp84b vs. L. salmonis genes
BLAST of muscle lim protein mlp84b vs. SwissProt
BLAST of muscle lim protein mlp84b vs. nr

BLAST of muscle lim protein mlp84b vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 4


Match Name	E-value	Identity	Description
EMLSAG00000008661	4.990e-20	47.14	supercontig:LSalAtl2s:LSalAtl2s537:22793:23575:-1 ...	[more]
EMLSAG00000010186	4.286e-9	35.53	supercontig:LSalAtl2s:LSalAtl2s676:246967:250571:1...	[more]
EMLSAG00000000389	2.462e-8	31.88	supercontig:LSalAtl2s:LSalAtl2s1062:164646:204460:...	[more]
EMLSAG00000010526	2.618e-8	37.68	supercontig:LSalAtl2s:LSalAtl2s69:245581:253280:1 ...	[more]

BLAST of muscle lim protein mlp84b vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1705934\|sp\|P50462.1\|CSRP3_MOUSE	6.700e-12	33.33	RecName: Full=Cysteine and glycine-rich protein 3;...	[more]
gi\|1705933\|sp\|P50461.1\|CSRP3_HUMAN	6.988e-12	33.33	RecName: Full=Cysteine and glycine-rich protein 3;...	[more]
gi\|118161\|sp\|P21291.3\|CSRP1_HUMAN	7.652e-12	43.86	RecName: Full=Cysteine and glycine-rich protein 1;...	[more]
gi\|75061939\|sp\|Q5RCT4.3\|CSRP1_PONAB	7.733e-12	43.86	RecName: Full=Cysteine and glycine-rich protein 1;...	[more]
gi\|75077434\|sp\|Q4U0T9.1\|CSRP3_BOVIN	8.714e-12	33.33	RecName: Full=Cysteine and glycine-rich protein 3;...	[more]
gi\|1345932\|sp\|P47875.2\|CSRP1_RAT	9.444e-12	43.86	RecName: Full=Cysteine and glycine-rich protein 1;...	[more]
gi\|47605401\|sp\|P97315.3\|CSRP1_MOUSE	9.954e-12	43.86	RecName: Full=Cysteine and glycine-rich protein 1;...	[more]
gi\|82592776\|sp\|Q3MHY1.3\|CSRP1_BOVIN	1.117e-11	43.86	RecName: Full=Cysteine and glycine-rich protein 1;...	[more]
gi\|47605400\|sp\|P97314.3\|CSRP2_MOUSE	1.793e-11	40.85	RecName: Full=Cysteine and glycine-rich protein 2;...	[more]
gi\|2497674\|sp\|Q16527.3\|CSRP2_HUMAN	1.812e-11	40.85	RecName: Full=Cysteine and glycine-rich protein 2;...	[more]

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BLAST of muscle lim protein mlp84b vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|225713544\|gb\|ACO12618.1\|	4.674e-16	47.14	Muscle LIM protein Mlp84B [Lepeophtheirus salmonis...	[more]
gi\|290462477\|gb\|ADD24286.1\|	5.130e-15	48.33	Muscle LIM protein Mlp84B [Lepeophtheirus salmonis...	[more]
gi\|225709430\|gb\|ACO10561.1\|	1.430e-14	44.29	Muscle LIM protein Mlp84B [Caligus rogercresseyi]	[more]
gi\|225709210\|gb\|ACO10451.1\|	1.461e-14	44.29	Muscle LIM protein Mlp84B [Caligus rogercresseyi]	[more]
gi\|1325279013\|ref\|XP_023324155.1\|	2.146e-14	41.25	cysteine and glycine-rich protein 1-like [Eurytemo...	[more]
gi\|1325279011\|ref\|XP_023324154.1\|	6.355e-14	40.00	cysteine and glycine-rich protein 1-like [Eurytemo...	[more]
gi\|556978453\|ref\|XP_005996295.1\|	4.022e-12	40.79	PREDICTED: cysteine and glycine-rich protein 3 [La...	[more]
gi\|663245252\|ref\|XP_008503016.1\|	7.345e-12	36.25	PREDICTED: cysteine and glycine-rich protein 3 [Ca...	[more]
gi\|327259793\|ref\|XP_003214720.1\|	1.492e-11	38.75	PREDICTED: cysteine and glycine-rich protein 3 [An...	[more]
gi\|1048432314\|ref\|XP_017532426.1\|	1.634e-11	42.25	PREDICTED: cysteine and glycine-rich protein 2-lik...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold452_size166894	supercontig	scaffold452_size166894:31102..32238 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold452_size166894-snap-gene-0.43-mRNA-1	maker-scaffold452_size166894-snap-gene-0.43-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold452_size166894:31102..32238-

gene from alignment at scaffold452_size166894:31102..32238-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold452_size166894-snap-gene-0.43 ID=maker-scaffold452_size166894-snap-gene-0.43|Name=muscle lim protein mlp84b|organism=Tigriopus kingsejongensis|type=gene|length=1137bp|location=Sequence derived from alignment at scaffold452_size166894:31102..32238- (Tigriopus kingsejongensis)
ATCGCCTCCAACGAGACATCTTTTTCCTCTAGATTCCTTCGCAGTGCTTC
GACGATATCCAGTTCCAGCCACCTCTAATCGCCATGGTTTGGTCCCCTAA
AGATCCTCACCGATGTCCTGCTTGCAAAAGACCAGTATATCCCGCTGAGC
AGGTCAGTTCTTTTATTTCTTTTGGACCAACCACTACAAGACAGATGGGG
CACTAAGGAGACGGTTTTGATATCCAAAAACAATCGTCGATCTTATTTTG
GTTTGACAGCATATCTCCATCTCAGGAGGTAACCTTTAAATACCCCTATT
CTAGACTTTTATGTTAAACTGCAAAGTGTTTCGGCAGTTATTTTCAAATT
ACGTAAACTTTTCCCACTTGCTCTATCTGATATCGCCCCAATCACTCCCT
AACTCACAAGTGTGTTATCGACACTAAACTTTACATATAAATGCCTATCA
ACTGACAGTCGTATTCTTCTCAATTTACTCGCTTTAACATTTTTTTGGAT
AACATATATTACTTACGTATGGATGATGACTACATATCTACAGAAGTTGC
AAGACCATAGGTGATACAATCTGTTGGAAAGATGGGAATGTTCAGAACTC
GACAATCCAGGACTCAGAACGTGACTCAATTGTTGCTTTTTGGCAAACTG
GTTAGCTAAGCCAACCAGTTTGGTCAAAGAAACGGGAAGATAACTTAACC
TTATGCACAGGTCAGCTGATAAGCAGGAACGAGGCGGTAATTTCTCAGCC
CATCTAGCGTTGACAGCTGCCAGAGAATTTGGCCAGTTTTGATCTGGGAA
CAAGGACAAACTGGGACATTGATGAATTGCTCCAAGACACACATCGTTAT
GCGCTTTTAGGTGTTCTGCAAGGTGCTAGCGCCATTGCCCCGGCTGAATG
ACCAGGAAGCTTTAAGTGAGCCTAGACATTCTTTCTCGTTTACAGATCAT
TGCCACGGATAGAACTCCTTACCACCGGATGTGTGTCCGCTGTGTGGGCT
GTAAAACTGGCCTTACCCCTGGATCGCTGACTGAGAAAGATGGCCAAATC
TACTGCCGAGTGTGCTTCAGCAAGTTCCAAAATCATTACGCTCAGAATGG
TTATGGTCAAGGTCAAATGTCAGACGAGGAAAGATCC

Synonyms

The feature 'muscle lim protein mlp84b' has the following synonyms


Synonym
Tk11713

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