thyrotroph embryonic factor, maker-scaffold496_size155344-snap-gene-0.23 (gene) Tigriopus kingsejongensis

Overview
Namethyrotroph embryonic factor
Unique Namemaker-scaffold496_size155344-snap-gene-0.23
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of thyrotroph embryonic factor vs. L. salmonis genes
Match: EMLSAG00000013040 (supercontig:LSalAtl2s:LSalAtl2s9:1117895:1125483:1 gene:EMLSAG00000013040 transcript:EMLSAT00000013040 description:"maker-LSalAtl2s9-snap-gene-11.6")

HSP 1 Score: 93.9745 bits (232), Expect = 2.387e-23
Identity = 41/54 (75.93%), Postives = 50/54 (92.59%), Query Frame = 0 
Query:  163 PQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVSLEKE 216
            P+D +YWERRRKNN+AAKK RDARRVRENQLR+KVLCLENANQ+LR+++  EK+
Sbjct:  165 PRDEKYWERRRKNNMAAKKXRDARRVRENQLRLKVLCLENANQVLRTQLKREKD 218
[Close]
BLAST of thyrotroph embryonic factor vs. L. salmonis genes
Match: EMLSAG00000000825 (supercontig:LSalAtl2s:LSalAtl2s1137:91937:94288:1 gene:EMLSAG00000000825 transcript:EMLSAT00000000825 description:"maker-LSalAtl2s1137-snap-gene-0.11")

HSP 1 Score: 58.5362 bits (140), Expect = 2.361e-10
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 0 
Query:  164 QDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVS-LEKEVNTEMRERIKVI 228
            +D  YWERR+KNN AAK+SRDARR +EN++ ++   LE  N  L+ +++ L  E+     E IKVI
Sbjct:  296 KDDAYWERRKKNNEAAKRSRDARRNKENEVAVRAQFLEQENIQLKIELAQLRSEILNLRDELIKVI 361
[Close]
BLAST of thyrotroph embryonic factor vs. L. salmonis genes
Match: EMLSAG00000002393 (supercontig:LSalAtl2s:LSalAtl2s145:1039034:1040746:1 gene:EMLSAG00000002393 transcript:EMLSAT00000002393 description:"maker-LSalAtl2s145-augustus-gene-10.2")

HSP 1 Score: 53.1434 bits (126), Expect = 1.889e-8
Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 0 
Query:  160 PRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVSLEKEVNTEMRERI--KVIEAVEGDHRVSLP 240
            P   +D +Y+ERR +NN++AK+SRD R+  E    IKV   EN N +LR+    +KE   E +E +   + EA    ++V LP
Sbjct:  277 PDAEKDNKYYERRVRNNISAKRSRDLRKCIEGTNTIKVTKYENENSILRA----QKEKYIEEKEYLLRIIAEAKLNKNQVFLP 355
[Close]
BLAST of thyrotroph embryonic factor vs. SwissProt
Match: gi|51316561|sp|Q9JLC6.1|TEF_MOUSE (RecName: Full=Thyrotroph embryonic factor)

HSP 1 Score: 68.1662 bits (165), Expect = 3.133e-12
Identity = 32/59 (54.24%), Postives = 45/59 (76.27%), Query Frame = 0 
Query:  160 PRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVS-LEKEV 217
            P + +D +YW RR+KNN+AAK+SRDARR++ENQ+ I+   LE  N  LR++V+ L KEV
Sbjct:  226 PDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEV 284
[Close]
BLAST of thyrotroph embryonic factor vs. SwissProt
Match: gi|83305807|sp|P41224.3|TEF_RAT (RecName: Full=Thyrotroph embryonic factor)

HSP 1 Score: 67.781 bits (164), Expect = 3.486e-12
Identity = 32/59 (54.24%), Postives = 45/59 (76.27%), Query Frame = 0 
Query:  160 PRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVS-LEKEV 217
            P + +D +YW RR+KNN+AAK+SRDARR++ENQ+ I+   LE  N  LR++V+ L KEV
Sbjct:  226 PDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEV 284
[Close]
BLAST of thyrotroph embryonic factor vs. SwissProt
Match: gi|51338730|sp|Q10587.3|TEF_HUMAN (RecName: Full=Thyrotroph embryonic factor)

HSP 1 Score: 67.781 bits (164), Expect = 3.936e-12
Identity = 32/59 (54.24%), Postives = 45/59 (76.27%), Query Frame = 0 
Query:  160 PRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVS-LEKEV 217
            P + +D +YW RR+KNN+AAK+SRDARR++ENQ+ I+   LE  N  LR++V+ L KEV
Sbjct:  228 PDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEV 286
[Close]
BLAST of thyrotroph embryonic factor vs. SwissProt
Match: gi|57013027|sp|Q92172.2|TEF_CHICK (RecName: Full=Transcription factor VBP; AltName: Full=Thyrotroph embryonic factor homolog; AltName: Full=Vitellogenin gene-binding protein)

HSP 1 Score: 67.781 bits (164), Expect = 3.940e-12
Identity = 32/59 (54.24%), Postives = 45/59 (76.27%), Query Frame = 0 
Query:  160 PRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVS-LEKEV 217
            P + +D +YW RR+KNN+AAK+SRDARR++ENQ+ I+   LE  N  LR++V+ L KEV
Sbjct:  238 PDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEV 296
[Close]
BLAST of thyrotroph embryonic factor vs. SwissProt
Match: gi|6686009|sp|P97516.1|TEF_PHOSU (RecName: Full=Thyrotroph embryonic factor)

HSP 1 Score: 66.2402 bits (160), Expect = 6.496e-12
Identity = 28/53 (52.83%), Postives = 41/53 (77.36%), Query Frame = 0 
Query:  160 PRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVS 212
            P + +D +YW RR+KNN+AAK+SRDARR++ENQ+ I+   LE  N  LR++V+
Sbjct:  168 PDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVA 220
[Close]
BLAST of thyrotroph embryonic factor vs. SwissProt
Match: gi|6919907|sp|Q16534.1|HLF_HUMAN (RecName: Full=Hepatic leukemia factor)

HSP 1 Score: 66.2402 bits (160), Expect = 1.295e-11
Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 0 
Query:  164 QDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVS-LEKEV 217
            +D +YW RRRKNN+AAK+SRDARR++ENQ+ I+   LE  N  LR +V+ L KE+
Sbjct:  224 KDDKYWARRRKNNMAAKRSRDARRLKENQIAIRASFLEKENSALRQEVADLRKEL 278
[Close]
BLAST of thyrotroph embryonic factor vs. SwissProt
Match: gi|51315795|sp|Q8BW74.1|HLF_MOUSE (RecName: Full=Hepatic leukemia factor)

HSP 1 Score: 66.2402 bits (160), Expect = 1.400e-11
Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 0 
Query:  164 QDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVS-LEKEV 217
            +D +YW RRRKNN+AAK+SRDARR++ENQ+ I+   LE  N  LR +V+ L KE+
Sbjct:  224 KDDKYWARRRKNNMAAKRSRDARRLKENQIAIRASFLEKENSALRQEVADLRKEL 278
[Close]
BLAST of thyrotroph embryonic factor vs. SwissProt
Match: gi|6919906|sp|Q64709.1|HLF_RAT (RecName: Full=Hepatic leukemia factor)

HSP 1 Score: 65.855 bits (159), Expect = 1.557e-11
Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 0 
Query:  164 QDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVS-LEKEV 217
            +D +YW RRRKNN+AAK+SRDARR++ENQ+ I+   LE  N  LR +V+ L KE+
Sbjct:  224 KDDKYWARRRKNNMAAKRSRDARRLKENQIAIRASFLEKENSALRQEVADLRKEL 278
[Close]
BLAST of thyrotroph embryonic factor vs. SwissProt
Match: gi|47117805|sp|Q60925.2|DBP_MOUSE (RecName: Full=D site-binding protein; AltName: Full=Albumin D box-binding protein; AltName: Full=Albumin D-element-binding protein)

HSP 1 Score: 62.3882 bits (150), Expect = 3.096e-10
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0 
Query:  160 PRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKV 211
            P + +D +YW RR KNN AAK+SRDARR++ENQ+ ++   LE  N +LR +V
Sbjct:  250 PEEQKDEKYWSRRYKNNEAAKRSRDARRLKENQISVRAAFLEKENALLRQEV 301
[Close]
BLAST of thyrotroph embryonic factor vs. SwissProt
Match: gi|90108430|sp|Q32PF6.2|DBP_BOVIN (RecName: Full=D site-binding protein; AltName: Full=Albumin D box-binding protein; AltName: Full=Albumin D-element-binding protein)

HSP 1 Score: 62.3882 bits (150), Expect = 3.096e-10
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 0 
Query:  160 PRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKV 211
            P + +D +YW RR KNN AAK+SRDARR++ENQ+ ++   LE  N +LR +V
Sbjct:  250 PEEQKDEKYWSRRYKNNEAAKRSRDARRLKENQISVRAAFLEKENALLRQEV 301
[Close]
BLAST of thyrotroph embryonic factor vs. nr
Match: gi|1325307583|ref|XP_023335408.1| (uncharacterized protein LOC111706716 [Eurytemora affinis])

HSP 1 Score: 91.6633 bits (226), Expect = 1.092e-17
Identity = 42/67 (62.69%), Postives = 54/67 (80.60%), Query Frame = 0 
Query:  164 QDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVSLEKEVNTEMRERIKVIEA 230
            +D +YWERRRKNNLAAKKSRDARRVRENQLR++VLC EN  ++LRS++   +E N  ++ER+K  E 
Sbjct:  284 KDDKYWERRRKNNLAAKKSRDARRVRENQLRLRVLCSENQIRVLRSQLDRSQEENHSLKERLKKYEG 350
[Close]
BLAST of thyrotroph embryonic factor vs. nr
Match: gi|1274983740|gb|PIK32910.1| (Hlf [Apostichopus japonicus])

HSP 1 Score: 71.633 bits (174), Expect = 9.584e-12
Identity = 53/163 (32.52%), Postives = 85/163 (52.15%), Query Frame = 0 
Query:   69 HSVTFDVNPDG--LSPFQEHQMDPMCPGTDGMALRSHSGLPLASGLGSRGLQITTSSTESDYYQSSPGAMSELESESHYASGGKSSWPQNSEQPRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVSLEKEVNTEMRERIKVIE 229
            HS+     P G  ++ FQE       PGT    L S   + +A  + S  + + T+  ++++   +P   +  E +       K S  Q    P + +D +YWERRRKNN+AAK+SRDARRV+ENQ+ I+   L+  N  L+S+V   K+ N   ++ ++  E
Sbjct:   18 HSMDGGATPLGSPIAAFQEENPSVASPGTPPSPL-SPVNVDVAFAVSSTDVALATAPGQNEF---NPREKTFSEDDLKPQPMVKKSKKQYV--PEELKDDKYWERRRKNNIAAKRSRDARRVKENQIVIRTSFLQKENSCLKSQVHDLKKENQSFKKLVETYE 174
[Close]
BLAST of thyrotroph embryonic factor vs. nr
Match: gi|1229179146|ref|XP_022103079.1| (thyrotroph embryonic factor-like [Acanthaster planci])

HSP 1 Score: 71.633 bits (174), Expect = 4.228e-11
Identity = 31/70 (44.29%), Postives = 50/70 (71.43%), Query Frame = 0 
Query:  160 PRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVSLEKEVNTEMRERIKVIE 229
            P + +D +YW+RRRKNN+AAK+SRDARR++ENQ+ ++   LE  N  LR+++   K+ N+ ++  +K  E
Sbjct:  217 PHEAKDDKYWDRRRKNNIAAKRSRDARRIKENQISMRAAFLEKENSALRTELMALKKENSNLKSVVKSYE 286
[Close]
BLAST of thyrotroph embryonic factor vs. nr
Match: gi|1168915229|ref|XP_020500475.1| (thyrotroph embryonic factor isoform X2 [Labrus bergylta])

HSP 1 Score: 71.2478 bits (173), Expect = 7.003e-11
Identity = 33/58 (56.90%), Postives = 46/58 (79.31%), Query Frame = 0 
Query:  160 PRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVS-LEKE 216
            P + +D +YW+RR+KNN+AAK+SRDARR++ENQ+ ++   LE  NQ LRS+VS L KE
Sbjct:  225 PEEQKDDKYWQRRKKNNVAAKRSRDARRLKENQITVRAAFLERENQALRSEVSDLRKE 282
[Close]
BLAST of thyrotroph embryonic factor vs. nr
Match: gi|1168915227|ref|XP_020500474.1| (thyrotroph embryonic factor isoform X1 [Labrus bergylta])

HSP 1 Score: 71.633 bits (174), Expect = 7.117e-11
Identity = 33/58 (56.90%), Postives = 46/58 (79.31%), Query Frame = 0 
Query:  160 PRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVS-LEKE 216
            P + +D +YW+RR+KNN+AAK+SRDARR++ENQ+ ++   LE  NQ LRS+VS L KE
Sbjct:  240 PEEQKDDKYWQRRKKNNVAAKRSRDARRLKENQITVRAAFLERENQALRSEVSDLRKE 297
[Close]
BLAST of thyrotroph embryonic factor vs. nr
Match: gi|1274144108|ref|XP_022832419.1| (hepatic leukemia factor isoform X6 [Spodoptera litura])

HSP 1 Score: 70.8626 bits (172), Expect = 7.590e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 0 
Query:  156 NSEQPRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVSLEKEVNTEMRERIKVIEAV 231
            N   P   +D +YW RRRKNN+AAK+SRDARR++ENQ+ ++   LE  N  LR +V L K+ N  +RE++     V
Sbjct:  194 NDFVPDDLKDDKYWARRRKNNMAAKRSRDARRMKENQIAMRAGYLEKENMGLRQEVELLKKENHILREKLSKFADV 269
[Close]
BLAST of thyrotroph embryonic factor vs. nr
Match: gi|1274144110|ref|XP_022832420.1| (hepatic leukemia factor isoform X7 [Spodoptera litura])

HSP 1 Score: 70.8626 bits (172), Expect = 7.757e-11
Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = 0 
Query:  160 PRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVSLEKEVNTEMRERIKVIEAV 231
            P   +D +YW RRRKNN+AAK+SRDARR++ENQ+ ++   LE  N  LR +V L K+ N  +RE++     V
Sbjct:  192 PDDLKDDKYWARRRKNNMAAKRSRDARRMKENQIAMRAGYLEKENMGLRQEVELLKKENHILREKLSKFADV 263
[Close]
BLAST of thyrotroph embryonic factor vs. nr
Match: gi|1199395661|ref|XP_021193008.1| (hepatic leukemia factor-like isoform X6 [Helicoverpa armigera])

HSP 1 Score: 70.4774 bits (171), Expect = 8.727e-11
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 0 
Query:  156 NSEQPRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVSLEKEVNTEMRERI 225
            N   P   +D +YW RRRKNN+AAK+SRDARR++ENQ+ ++   LE  N  LR +V L K+ N  +RE++
Sbjct:  195 NDFVPDDLKDDKYWARRRKNNMAAKRSRDARRMKENQIAMRAGYLEKENMGLRQEVELLKKENHILREKL 264
[Close]
BLAST of thyrotroph embryonic factor vs. nr
Match: gi|1274144112|ref|XP_022832421.1| (hepatic leukemia factor isoform X8 [Spodoptera litura])

HSP 1 Score: 70.0922 bits (170), Expect = 8.937e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 0 
Query:  156 NSEQPRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVSLEKEVNTEMRERIKVIEAV 231
            N   P   +D +YW RRRKNN+AAK+SRDARR++ENQ+ ++   LE  N  LR +V L K+ N  +RE++     V
Sbjct:  165 NDFVPDDLKDDKYWARRRKNNMAAKRSRDARRMKENQIAMRAGYLEKENMGLRQEVELLKKENHILREKLSKFADV 240
[Close]
BLAST of thyrotroph embryonic factor vs. nr
Match: gi|1274144106|ref|XP_022832418.1| (hepatic leukemia factor isoform X5 [Spodoptera litura])

HSP 1 Score: 70.4774 bits (171), Expect = 9.185e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 0 
Query:  156 NSEQPRQPQDARYWERRRKNNLAAKKSRDARRVRENQLRIKVLCLENANQMLRSKVSLEKEVNTEMRERIKVIEAV 231
            N   P   +D +YW RRRKNN+AAK+SRDARR++ENQ+ ++   LE  N  LR +V L K+ N  +RE++     V
Sbjct:  197 NDFVPDDLKDDKYWARRRKNNMAAKRSRDARRMKENQIAMRAGYLEKENMGLRQEVELLKKENHILREKLSKFADV 272
The following BLAST results are available for this feature:
BLAST of thyrotroph embryonic factor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 3
Match NameE-valueIdentityDescription
EMLSAG000000130402.387e-2375.93supercontig:LSalAtl2s:LSalAtl2s9:1117895:1125483:1... [more]
EMLSAG000000008252.361e-1046.97supercontig:LSalAtl2s:LSalAtl2s1137:91937:94288:1 ... [more]
EMLSAG000000023931.889e-838.55supercontig:LSalAtl2s:LSalAtl2s145:1039034:1040746... [more]
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BLAST of thyrotroph embryonic factor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
gi|51316561|sp|Q9JLC6.1|TEF_MOUSE3.133e-1254.24RecName: Full=Thyrotroph embryonic factor[more]
gi|83305807|sp|P41224.3|TEF_RAT3.486e-1254.24RecName: Full=Thyrotroph embryonic factor[more]
gi|51338730|sp|Q10587.3|TEF_HUMAN3.936e-1254.24RecName: Full=Thyrotroph embryonic factor[more]
gi|57013027|sp|Q92172.2|TEF_CHICK3.940e-1254.24RecName: Full=Transcription factor VBP; AltName: F... [more]
gi|6686009|sp|P97516.1|TEF_PHOSU6.496e-1252.83RecName: Full=Thyrotroph embryonic factor[more]
gi|6919907|sp|Q16534.1|HLF_HUMAN1.295e-1156.36RecName: Full=Hepatic leukemia factor[more]
gi|51315795|sp|Q8BW74.1|HLF_MOUSE1.400e-1156.36RecName: Full=Hepatic leukemia factor[more]
gi|6919906|sp|Q64709.1|HLF_RAT1.557e-1156.36RecName: Full=Hepatic leukemia factor[more]
gi|47117805|sp|Q60925.2|DBP_MOUSE3.096e-1051.92RecName: Full=D site-binding protein; AltName: Ful... [more]
gi|90108430|sp|Q32PF6.2|DBP_BOVIN3.096e-1051.92RecName: Full=D site-binding protein; AltName: Ful... [more]

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BLAST of thyrotroph embryonic factor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325307583|ref|XP_023335408.1|1.092e-1762.69uncharacterized protein LOC111706716 [Eurytemora a... [more]
gi|1274983740|gb|PIK32910.1|9.584e-1232.52Hlf [Apostichopus japonicus][more]
gi|1229179146|ref|XP_022103079.1|4.228e-1144.29thyrotroph embryonic factor-like [Acanthaster plan... [more]
gi|1168915229|ref|XP_020500475.1|7.003e-1156.90thyrotroph embryonic factor isoform X2 [Labrus ber... [more]
gi|1168915227|ref|XP_020500474.1|7.117e-1156.90thyrotroph embryonic factor isoform X1 [Labrus ber... [more]
gi|1274144108|ref|XP_022832419.1|7.590e-1146.05hepatic leukemia factor isoform X6 [Spodoptera lit... [more]
gi|1274144110|ref|XP_022832420.1|7.757e-1147.22hepatic leukemia factor isoform X7 [Spodoptera lit... [more]
gi|1199395661|ref|XP_021193008.1|8.727e-1148.57hepatic leukemia factor-like isoform X6 [Helicover... [more]
gi|1274144112|ref|XP_022832421.1|8.937e-1146.05hepatic leukemia factor isoform X8 [Spodoptera lit... [more]
gi|1274144106|ref|XP_022832418.1|9.185e-1146.05hepatic leukemia factor isoform X5 [Spodoptera lit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold496_size155344supercontigscaffold496_size155344:74716..80033 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold496_size155344-snap-gene-0.23-mRNA-1maker-scaffold496_size155344-snap-gene-0.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold496_size155344:74716..80033+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold496_size155344-snap-gene-0.23 ID=maker-scaffold496_size155344-snap-gene-0.23|Name=thyrotroph embryonic factor|organism=Tigriopus kingsejongensis|type=gene|length=5318bp|location=Sequence derived from alignment at scaffold496_size155344:74716..80033+ (Tigriopus kingsejongensis)
CAAATGCATCACCAACCTTGACACTGAACTTGCGTCTCCTGGTGGTGGGG
CCAAAATGTGTATTGTTTGAGTGCATTGGTCGAGGACAATGAATTATCGT
GAGAAGGAACCATGTGGTCCGATCCCAGTGCTAGCAACGCATATTCCCAC
CCCATGATGGTGGTGGACCAGCCCCAAGTGCGAGCATCCATGGGATTTTC
CGCCTCCTTGCCATCAGTCCACAGCTTGGCCCTCTATGAGGCTGGCATCC
ACGAGGCTGGGCCAATGCCAGACGACCTGGGCCCTGGGGACCAGACGGGT
ATAGAACGATCATAGAACACAGCGTTGCACCTTAGCACACGCGACACATT
GAAAAGTCTTCGAGCTGAGACAGCAATTGATGGTGCTTTTTTTGGCTCCG
ACTCGATCTCATTAGCCGCCGACCCAGAGCTCATCAGTCCAGAGAGCTGT
CAATGGTGGCACGCATGGTGTCAGTTTTCCGAGTGTTCGACCAACTATTG
CAGCTTCCACACGGGTCACTAGTGGGACAAACGTGTGTTGAGGGCACCCT
CGTATCTTAAGGTGGTAATACTTCTCTGCTGGACCATGAATCCAAAAAAC
AAAGGTTTCGCGCACGTACAGGGTGCGCCACATAAATTTGGGGAAGGAAA
ATTGATAATTGTAAAAAAGCGAAGCATATTTTTGGAAAGCTATTAATGAC
TTATAATGAGTGACTTCTCATCTGACGTACAGTGAATGGTGTAGTGGTCA
GCAATGAGGTCTGCGTTTCTGAAAGGTCCACGGAACGATTCACAGGCCCT
GCGGAAAAAAAAATACGCCACTCCAGACTTTCTTCTTTTGAGGGGAGCTG
ACGTCTCCCTGTAATCCTATTTCCTTGGGGGTTAGGTACACAGGCCGCAT
CTACTGTAGAGGCAGGGTCCTTTCTGTTTTCCCACAGATTAAAGTAGTGG
TTGGAACTGGATTATACTGGGCTGCAGGGCAACTAGCTAAATTTGCTAAT
AACATCAGTGGGGGCCCGTCAGTGATGACTCAACAGTGATCAATGGCCCT
GTGTACAGCATGGGTGCTCGCTCCATGGTGCGAACACAAAACCACCGGAA
GGTGCGATAACACACACACACACACTTCAATAGCTGAACATTTATCCCAC
CGTGAGTCTACTGTACATTACAACCTATTTTTTTGACCACAATGATGAGG
CTCGGCTTGGTGGTCTGAGAGATTATCCCCACCAGACACTTTTTGGAAGA
CATAATTTGGGGGGCTTTGGGGGGGgTCAACGAGTTTTGGCCCCGTTTTT
GCACAGACCCAAATCCTATGGATGTTTCTGTTTATAGCCATTCTTGTGAG
GAAGGTATTTGGCGAGTGTGGCACAATGGCATGACACGCTCCTGGCAATG
AGGACCTCGGTCCCCCCCCCCTCCGCAAAGTAAAACATGTATTTATTGTG
GCAATTGCCAGTTAAATAACAAAAACTAAAGTTGCTTAGTCTATACTTTC
AAGGGATATTGGCATGGCTTTGCCCAAACCTTAAAAATGTGAGCAAAGAA
CACTGCTGTGAAGGCTGCAGATCGATTCCCGGGCCCAATAGTAAAGAAAC
GTCCGCCCCTCCAGACTTTCTTCTACTAAGGGAAACTGACGACTCCCTGT
CAACCTAGTCGTTGTGGATCAGGTACACAGGTGTGGTGACCACATTATGG
GGAAGGGTCCCTTCTGGTTCCCAAAAAAACTAAAGTAGTGATTGGAGCTG
GATTGTAGGGGCTGCACGCTGGCTAACTCGACTAGCTAACTCAATCTGTG
TTCAGATTGTGTGTGTTCACCATGACATTTACCTGTCCATGAGGAACACG
ATACCACCGGAAGGTGCGACAACACACTATAAAAATAGCTCATAATTTTC
CGTGCCGCACTTTTGGGGCCCACCCTGTACACAATGTGCTGCTGCCGCAA
TAACAACCAATAATATTTCAATCAATTCATGTTTGTTCGTGGGGCCCAAA
GCATTATTAACCCATGGATGAGTCAGCCTAGTAATTGCCCATTCGTCCTG
ACTGAATGACCGCTAGTTGACCATGTTCAATTTCGCTTGGGAAAGCAACC
CTTGATCTAGTTTTCAAGCAACTAAGTGGTGCCAACTCACAGCTATTGTT
TGCTTCCCTGGCGGAATTAAATTGGTAGGGATAATGTGGTAATTCCTCGA
AGGTAAGGTAAAATAATTCATGATCAGTTTGCGAAGCTGGCTGGCTATGT
CTCAATAGCAATTGCCTGGTTGGACAGAAATGTCCTGAGCCTTCCAAACA
AACAAATCACAGTTTACTGGTGCTATTTATCCTCGTCTGGGGCACGTTAT
TCTTAACTTTAACGGAATTAGTGGAGGGGGGGACATTTTCAAAGAACATT
CAGATCACCATTTTCCATGGCATGAAACATCAACTCCTGTGCTTTAAGGA
ATATTTAAACGGTGTTACACAAAAAAATTTGAGCCAAAAAATGCTTGTCG
AAACTGTATTTTCGATTCATTCTGCAATCATTCCGAAGTCGTGTATACAG
CAACAATAGACACTTCGAGGGATGCATCTGCCATCTCAGGGCTCGTTTTT
AATGACCCTAAAAATTTAGGCCCAGCCGAGACATCCCACACTAGACAAAG
TCTGATTTAGTTTGAAAGTAAAGTGTTGGCTGACAACGTCAGATATCCTT
TCAGAAGGCCGACAGAAAATAACACCACAATTTTGCATTAAAAAATCAAG
AAATACATGCCAATTATTGGGTCTTTTTTCATTATCTATGAGAGATTTCC
CAAGCAACAAAGGGGAATTTTAGAAACGAGATAAAATATATTATGCACAT
TTAAGAAGATCCGTATGATTGATTGGTGTTGAGCATGGAAACATAGCTAT
CCAATATTTTTAGATTGTTTGTGCGCTTTGAAATGATTGCATAACTTCAA
AATGTGTTAAATATCTTGGTGTTTGAGAACATTTCAGAACCAAAGAGACA
ATATGTGTTTTTCACTTGGCTCGCAGTAAACCTTTATAATGAGCTTAATG
AACCATGACAATTGCACAATATATGGAATGGGACATGAATAGGATGAAGA
TGTGACCCACGCTAAACTAGCTTGTAAAATTGCGTGAGTGTTTTTATTCA
GGAATGACATTTTTAAGTAATTTTAAAATGGAGGCCATAATAGAGTTTCA
TGGCCTGAAATGGATGATTACTTATGCACTGTATGATGTACTAATGACAG
CTGCTGCTCGTATTCTCTGCTAGTTTATCCCGTTCGAAAACTGGTTTTCT
CGCTCTGGCCGGCTGAAAGGGCTAGTCGGCAATTGGCGTCACTCAAGCCA
AACAATACTGGCCGCCTCTTAGCCTTACCGGTTCTTCCCTCGAGTACTGG
GAGTCATCAGTTCTATAAATTGCATATTCACGCATACTCACTCAAATTAC
GAAAAAAAATTAAGTCAGTGGGATCTAGTGTGATCTTAATTTTTTGCACC
CTTGTTCATTTCAGTTCCTGTGACATAGTTTTGTTAAGTTCCTGCACGTT
AACTTGTTTGTTTTCAAGCCTCTACTGTATCGACATCATTGTTGTTAAGG
TTTCATTCAGTCCATCAAAGACATGAACCATAATCTTTTGTCAATTTGTG
GAACCCACAAAGAGTCGCCTACAATAAATTTAAAACAGACATAGATAAAA
AATAATTTTATTAAAAAATACAAATGTCAGAAAAATGAATCAAGTTCAAG
TGGCATTTGAAATGGTCCAAACTCTAGAACTTATACATGCAAAGTGTATA
CGTTGTATCTAACGATGGTAACTTTCAGGAACTCATTTAGGGTCGGGCAA
GTGGTTAGGGCCAGAATATCCCAAAATTACTTCAAATTTGGGACAATGGT
TGAACGAGGTGCATGGCAGAGTAGAGAAAATCCCAGAGGCGAGCAAACCT
GCTATATAAAAGTAATCACTTTACAAGAGCCAACAGCAGTGTTCACCTTT
TCCAGTATGCAACTCACTAAATGTGTTGCCCAAAACCAATTTGGTTGCTT
GCTTGTGGTGAATGACTTTTGCCTTCATGGTTCCCTAAAACACCTGTTGC
GAGGCTTAAACAGTACTATGTCCGGCTCTGTAATAAAAAACGACTTTATT
GGCCTGCATGTTTATATATATTATACATATAATATACATATGTATGTCAT
ATATGCTTGCTGCTTATGTACGAAGCCACACTATCCCTTATTTTCAATGT
CACTCATTCGGAACTTAGTTGTGAGTCGCAACCAACGGTTCACTTACCTG
GAGTGGTACGTGACTGATTGTACATATTTAAATTACGTCGACAAAGATCG
ATGAACATGGACCAAAACAACTACAGTTAGGGAGGGGTACTGACCCACCA
CACGTCACATTTAGCCCCAAAAGGGGACACGTCCTGAAATAGATCTTCCT
GAGACTTGTTATAATTATGACAAGTTCACACAAGTGCCAAGCATAATTGC
AAGCGGAGTCCTCTCGGAGACAAAGTGAGTGGTTCCACTTCTCGTTGAAG
TCCCACTCAGATCCCAATGCTATTACTTCTTGGAACGAGATGAGTGACTC
ATCCGACCAATTTGGATCTCTTTCATTCCAGACAGAACCGTTCTGAATCA
TTCCGTGACGTTTGACGTGAATCCAGATGGATTATCGCCCTTTCAAGAGC
ATCAAATGGATCCCATGTGTCCTGGAACGGATGGGATGGCCCTGCGTTCC
CATTCAGGGCTGCCCTTGGCCTCGGGATTGGGTTCCCGAGGCCTCCAAAT
CACGACCTCATCCACAGAATCCGACTATTATCAGTCCAGTCCTGGGGCCA
TGTCTGAGCTGGAGAGCGAATCTCATTATGCCAGTGGAGGGAAATCGTCA
TGGCCTCAGAACTCGGAGCAGCCTCGACAGCCTCAAGATGCGCGATATTG
GGAGCGCCGAAGGAAGAACAATTTGGCAGCCAAAAAGAGCCGAGATGCCC
GAAGAGTTCGGGAAAACCAATTGCGGATTAAAGTTCTGTGCTTGGAGAAT
GCCAATCAAATGCTACGTTCCAAAGTGAGCCTGGAGAAAGAGGTCAATAC
GGAAATGAGAGAGCGAATCAAAGTGATTGAGGCCGTGGAGGGCGACCACC
GTGTGAGCTTGCCCAAAGAGCCTCGTTGAGAATACTTGATCGTGAATCCT
TGATCGTGATTGTATTATTATTATCATACAACTCAAATGCTTAGCCGATT
ACTCACCGTGACTCACGATTAAGCCCTAATATATCTACTTTGAAGCAATA
CATCTCACTCTCATGCGA
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Synonyms
The feature 'thyrotroph embryonic factor' has the following synonyms
Synonym
Tk03357
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