chitinase isoform x1, maker-scaffold328_size205007-snap-gene-0.19 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of chitinase isoform x1 vs. L. salmonis genes
Match: EMLSAG00000008235 (supercontig:LSalAtl2s:LSalAtl2s497:5379:7138:-1 gene:EMLSAG00000008235 transcript:EMLSAT00000008235 description:"maker-LSalAtl2s497-augustus-gene-0.18") HSP 1 Score: 65.4698 bits (158), Expect = 4.749e-14 Identity = 35/91 (38.46%), Postives = 52/91 (57.14%), Query Frame = 0 Query: 27 DKKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDLGPSDCGPGECNFDSYRRFTALASE--TFVPMLSV 115 DK V+CY+ SWA Y+ G+FDV +D +CTH Y +A ID N++ + DP+ DL + G G Y+RFT + + + +LSV Sbjct: 25 DKAVLCYFSSWATYRRGKGKFDVENIDPSMCTHVAYGFAGIDENTYKIKVLDPYNDL-TENWGKG-----GYKRFTDMKKKNSNLITLLSV 109
BLAST of chitinase isoform x1 vs. L. salmonis genes
Match: EMLSAG00000005289 (supercontig:LSalAtl2s:LSalAtl2s282:351594:354484:1 gene:EMLSAG00000005289 transcript:EMLSAT00000005289 description:"maker-LSalAtl2s282-augustus-gene-3.25") HSP 1 Score: 60.4622 bits (145), Expect = 2.637e-12 Identity = 24/58 (41.38%), Postives = 37/58 (63.79%), Query Frame = 0 Query: 26 HDKKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDL 83 H+K VVCY+G+W++Y+ + G F +D LCTH +Y++A +D + DPW DL Sbjct: 36 HNKVVVCYWGTWSNYRPKDGAFKPEDIDASLCTHLIYSFAGLDETEXKIKSLDPWMDL 93
BLAST of chitinase isoform x1 vs. L. salmonis genes
Match: EMLSAG00000008812 (supercontig:LSalAtl2s:LSalAtl2s549:413892:415521:-1 gene:EMLSAG00000008812 transcript:EMLSAT00000008812 description:"maker-LSalAtl2s549-augustus-gene-4.7") HSP 1 Score: 57.3806 bits (137), Expect = 3.055e-11 Identity = 33/93 (35.48%), Postives = 52/93 (55.91%), Query Frame = 0 Query: 25 QHDKKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDLGPSDCGPGECNFDSYRRFTALASET--FVPMLSV 115 + +K ++CY+ SWA Y+ G+FDV +D +CTH Y +A +D NS+ + DP+ DL + G G + +RF L + V +LSV Sbjct: 23 KENKVILCYFSSWATYRWSNGKFDVENIDPFICTHVAYGFAGLDPNSYKIRLLDPYNDL-EENWGKG-----AMKRFNDLKKKNPKLVTLLSV 109
BLAST of chitinase isoform x1 vs. L. salmonis genes
Match: EMLSAG00000002698 (supercontig:LSalAtl2s:LSalAtl2s155:17602:57717:1 gene:EMLSAG00000002698 transcript:EMLSAT00000002698 description:"maker-LSalAtl2s155-augustus-gene-0.9") HSP 1 Score: 53.1434 bits (126), Expect = 1.115e-9 Identity = 27/80 (33.75%), Postives = 45/80 (56.25%), Query Frame = 0 Query: 6 LSAIFWSIAIQAGSSVSTRQHD--KKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDL 83 L + ++I +G+ + RQ D KKVVCYY +WA Y++ +F ++ LCTH +YA+ + + + P D + DL Sbjct: 34 LIVVLVCLSISSGTKLVKRQVDNQKKVVCYYANWAVYRQGQAKFSPQNINPYLCTHLIYAFGGLKKDD-TIAPFDKYQDL 112
BLAST of chitinase isoform x1 vs. SwissProt
Match: gi|59797979|sp|Q9W092.1|CHIT2_DROME (RecName: Full=Probable chitinase 2; Flags: Precursor) HSP 1 Score: 59.6918 bits (143), Expect = 1.640e-10 Identity = 34/89 (38.20%), Postives = 47/89 (52.81%), Query Frame = 0 Query: 19 SSVSTRQ---HDKKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDLGPSDCGPGECNFDSYRRFTAL 104 +SV+ R HDK VVCY +WA Y+ E G + + D +LCTH +YA+A +D + DPW DL + G G Y + T L Sbjct: 29 ASVAARTGPLHDKVVVCYVSTWAVYRPEQGAYAIENFDPNLCTHVVYAFAGLDITQAAIKSLDPWQDL-KEEYGKG-----GYEKMTGL 111
BLAST of chitinase isoform x1 vs. SwissProt
Match: gi|215273952|sp|Q9W5U2.2|CHI10_DROME (RecName: Full=Probable chitinase 10; AltName: Full=Probable chitinase 1; AltName: Full=Probable chitinase 3; Flags: Precursor) HSP 1 Score: 53.1434 bits (126), Expect = 3.215e-8 Identity = 32/92 (34.78%), Postives = 49/92 (53.26%), Query Frame = 0 Query: 24 RQHDKKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDLGPSDCGPGECNFDSYRRFTALASETFVPMLSV 115 R KV+CY+ +WA Y++ GRF ++T+LCTH +Y +A +D + L D W D+ E NF Y R T+L S+ L++ Sbjct: 961 RDSHYKVICYFTNWAWYRKGIGRFTPDDINTELCTHVIYGFAVLDYSELVLRTHDSWADV--------ENNF--YTRVTSLKSKGIKVSLAL 1042 HSP 2 Score: 51.9878 bits (123), Expect = 8.321e-8 Identity = 21/55 (38.18%), Postives = 36/55 (65.45%), Query Frame = 0 Query: 29 KVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDL 83 K++CY+ +WA Y++ G+F +D+DLCTH +Y +A + ++ + P D W DL Sbjct: 1410 KIICYFTNWAWYRQGGGKFLPEDIDSDLCTHIIYGFAVLSRDNLTIQPHDSWADL 1464 HSP 3 Score: 51.2174 bits (121), Expect = 1.594e-7 Identity = 23/55 (41.82%), Postives = 34/55 (61.82%), Query Frame = 0 Query: 29 KVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDL 83 KVVCY+ SWA Y+ G+F +D +LCTH +Y +A +D+ S + D W D+ Sbjct: 1909 KVVCYFTSWAWYRSSQGKFVPEDIDANLCTHLIYGFAVLDSKSLTIKTHDSWTDI 1963
BLAST of chitinase isoform x1 vs. nr
Match: gi|1160524505|gb|AQZ26773.1| (chitinase 8 [Tigriopus japonicus]) HSP 1 Score: 167.162 bits (422), Expect = 1.590e-47 Identity = 80/116 (68.97%), Postives = 91/116 (78.45%), Query Frame = 0 Query: 1 MKVL-ILSAIFWSIAIQAGSSVSTRQHDKKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDLGPSDCGPGECNFDSYRRFTALASETFVPMLSV 115 MKV ++ AI IQ V +Q DK +VCY+ SWAHY+E+PG FDVTW+D LCTHG+YAYADIDT +W LMP DPWYDLGPSDCG GECNFDSYRRFT+LASETF PMLSV Sbjct: 24 MKVFGLVLAILAISTIQEAQGV--QQSDKLLVCYFSSWAHYREDPGHFDVTWIDPTLCTHGIYAYADIDTVTWSLMPVDPWYDLGPSDCGIGECNFDSYRRFTSLASETFTPMLSV 137
BLAST of chitinase isoform x1 vs. nr
Match: gi|1160524507|gb|AQZ26774.1| (chitinase 9 [Tigriopus japonicus]) HSP 1 Score: 117.857 bits (294), Expect = 5.185e-29 Identity = 49/99 (49.49%), Postives = 69/99 (69.70%), Query Frame = 0 Query: 17 AGSSVSTRQHDKKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDLGPSDCGPGECNFDSYRRFTALASETFVPMLSV 115 A ++ H+K V CY+ +W+ Y+ P +FD++ +DTDLCTHG+Y ADID SW + DPW+DL SDC PG CN++ YRRFT LA E F+P+L++ Sbjct: 17 ASAACGQMNHNKTVACYFENWSFYRPPPVKFDISSIDTDLCTHGIYIAADIDNVSWTIFAADPWFDLDSSDCEPGYCNYNGYRRFTDLADEDFIPILAL 115
BLAST of chitinase isoform x1 vs. nr
Match: gi|1160524503|gb|AQZ26772.1| (chitinase 4 [Tigriopus japonicus]) HSP 1 Score: 117.472 bits (293), Expect = 1.948e-28 Identity = 53/113 (46.90%), Postives = 74/113 (65.49%), Query Frame = 0 Query: 3 VLILSAIFWSIAIQAGSSVSTRQHDKKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDLGPSDCGPGECNFDSYRRFTALASETFVPMLSV 115 L ++ + +A+ A S + HDK V CY G+W Y++ G+FD+ +DT CTHG Y +AD+D +W + DPWYDL P DC P CN+DSYRRFTAL S+ F+P+LS+ Sbjct: 8 ALGVATVIALLAVGA-HSQNVDDHDKIVSCYIGTWGFYRQGLGKFDIDDIDTQYCTHGFYGFADLDNITWTIYAYDPWYDLAPEDCEPFYCNYDSYRRFTALGSDKFMPLLSI 119
BLAST of chitinase isoform x1 vs. nr
Match: gi|1325321108|ref|XP_023342357.1| (acidic mammalian chitinase-like [Eurytemora affinis]) HSP 1 Score: 85.1149 bits (209), Expect = 5.771e-17 Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = 0 Query: 20 SVSTRQHDKKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDLGPSD--CGPGECNFDSYRRFTALASET 108 S S + K++VCY+G+WA Y+ G+FD+ +D +LCTH Y +A+++ +W + DPWYDL P D C C++DSYRRF AL + Sbjct: 121 SSSNPGNKKRLVCYFGAWAFYRIGFGQFDIDNIDPNLCTHLCYGFANMNNQTWEAVAYDPWYDLAPWDEGCDGDHCHYDSYRRFNALKQQN 211
BLAST of chitinase isoform x1 vs. nr
Match: gi|1061476746|gb|ODM94560.1| (putative chitinase 2 [Orchesella cincta]) HSP 1 Score: 78.5666 bits (192), Expect = 1.198e-14 Identity = 36/87 (41.38%), Postives = 53/87 (60.92%), Query Frame = 0 Query: 22 STRQHDKKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDLGPSDCGPGECNFDSYRRFTALASET 108 S H+K VVCY G+WA Y++ G++D+T +D LCTH +Y++A +D ++ + P DPW DL G G FD Y +FT L + Sbjct: 49 SVLAHEKVVVCYVGTWAAYRKLDGKYDITNIDPKLCTHIIYSFAGLDNQTYEMKPLDPWLDLFVEKNGGG---FDWYNKFTQLKQKN 132
BLAST of chitinase isoform x1 vs. nr
Match: gi|1325328590|ref|XP_023346146.1| (LOW QUALITY PROTEIN: acidic mammalian chitinase-like [Eurytemora affinis]) HSP 1 Score: 77.411 bits (189), Expect = 3.022e-14 Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 0 Query: 27 DKKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDLGPSD--CGPGECNFDSYRRFTAL 104 +KKVVCY+ + Y+ GRFD+ +D LCTH YA+A++D ++W L+ DPWYDL P D C C++DSYRRF L Sbjct: 24 EKKVVCYFSGFX-YRPGSGRFDIDNIDPFLCTHINYAFANMDNSTWELVSYDPWYDLAPWDQGCDGDHCHWDSYRRFNKL 102
BLAST of chitinase isoform x1 vs. nr
Match: gi|1022733513|gb|KZR98795.1| (Chitotriosidase-1 [Daphnia magna]) HSP 1 Score: 68.5514 bits (166), Expect = 1.213e-12 Identity = 40/109 (36.70%), Postives = 62/109 (56.88%), Query Frame = 0 Query: 1 MKVLILSAIFWSIA-IQAGSSVSTRQHDKKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDLGPSDCGPGECNFDSYRRFTALASET 108 MK+L+ I ++ G++V + KK+VCYYGSWA Y+ G+FDV +D LCTH +Y + + T++ ++P DPW DL + G G ++ RFT L + Sbjct: 1 MKLLLSCWILATVVHFSYGAAVEPKAGGKKMVCYYGSWAVYRPGNGKFDVEHIDPFLCTHIIYGFTGLGTDN-TMIPLDPWNDL-YDNWGKG-----AFLRFTGLKRQN 102
BLAST of chitinase isoform x1 vs. nr
Match: gi|644991431|ref|XP_008202532.1| (PREDICTED: chitinase isoform X1 [Nasonia vitripennis]) HSP 1 Score: 70.0922 bits (170), Expect = 1.100e-11 Identity = 35/85 (41.18%), Postives = 50/85 (58.82%), Query Frame = 0 Query: 24 RQHDKKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDLGPSDCGPGECNFDSYRRFTALASET 108 R +D+KV+CYYGSW+ Y+ G+FD++ +D LCTH +YA+A + S + DPW DL P D YR+F AL + Sbjct: 8 RSNDRKVICYYGSWSVYRPGLGKFDISHIDASLCTHLIYAFAGL-GESGEVKILDPWNDL------PDGGGKDGYRKFNALRKDN 85
BLAST of chitinase isoform x1 vs. nr
Match: gi|1229711565|ref|XP_022117797.1| (probable chitinase 2 [Pieris rapae]) HSP 1 Score: 69.707 bits (169), Expect = 1.158e-11 Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = 0 Query: 27 DKKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDLGPSDCGPGECNFDSYRRFTALASET 108 +K V+CYYG+WA Y+ G+FDVT ++T+LCTH +YA+A I++ ++ DP+ DL P D++R+F AL + Sbjct: 17 EKNVICYYGTWATYRNGLGKFDVTNINTNLCTHLVYAFAGINSQG-SVISLDPYLDL------PDNWGRDNFRKFNALKQKN 91
BLAST of chitinase isoform x1 vs. nr
Match: gi|1227102967|gb|OXU26105.1| (hypothetical protein TSAR_016779 [Trichomalopsis sarcophagae]) HSP 1 Score: 69.707 bits (169), Expect = 1.369e-11 Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 0 Query: 23 TRQHDKKVVCYYGSWAHYQEEPGRFDVTWVDTDLCTHGLYAYADIDTNSWFLMPTDPWYDLGPSDCGPGECNFDSYRRFTALASET 108 T +D+KV+CYYGSW+ Y+ G+FD++ +D+ LCTH +YA+A + S + DPW DL P D YR+F AL + Sbjct: 26 TTSNDRKVICYYGSWSVYRPGLGKFDISHIDSSLCTHLIYAFAGL-GESGQVKVLDPWNDL------PDGGGKDGYRKFNALRKDN 104 The following BLAST results are available for this feature:
BLAST of chitinase isoform x1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 4
BLAST of chitinase isoform x1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of chitinase isoform x1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold328_size205007:35905..36336- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold328_size205007-snap-gene-0.19 ID=maker-scaffold328_size205007-snap-gene-0.19|Name=chitinase isoform x1|organism=Tigriopus kingsejongensis|type=gene|length=432bp|location=Sequence derived from alignment at scaffold328_size205007:35905..36336- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'chitinase isoform x1' has the following synonyms
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