ras-related protein rab-40c, maker-scaffold300_size216557-snap-gene-1.27 (gene) Tigriopus kingsejongensis

Overview


Name	ras-related protein rab-40c
Unique Name	maker-scaffold300_size216557-snap-gene-1.27
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of ras-related protein rab-40c vs. L. salmonis genes
Match: EMLSAG00000006352 (supercontig:LSalAtl2s:LSalAtl2s346:685315:686337:-1 gene:EMLSAG00000006352 transcript:EMLSAT00000006352 description:"augustus_masked-LSalAtl2s346-processed-gene-6.8")

HSP 1 Score: 225.713 bits (574), Expect = 8.697e-76
Identity = 104/131 (79.39%), Postives = 116/131 (88.55%), Query Frame = 0

Query:   39 DITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSY 169
            D+  +    GI+RWLKEVD HAPGIPKVLIGNRLHL F+RQVDQ EAE YAEKN MGFFEVSPL NFNISESF E+ARMALKRNGMERLWR NKVSSLYELCAH+IVN+T+VYGID+LPLP+ +Q+NLKSY
Sbjct:   35 DVGKQEILSGINRWLKEVDDHAPGIPKVLIGNRLHLAFRRQVDQNEAEDYAEKNSMGFFEVSPLVNFNISESFIELARMALKRNGMERLWRLNKVSSLYELCAHTIVNRTSVYGIDKLPLPQSVQQNLKSY 165

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BLAST of ras-related protein rab-40c vs. L. salmonis genes
Match: EMLSAG00000001531 (supercontig:LSalAtl2s:LSalAtl2s1264:43928:52914:-1 gene:EMLSAG00000001531 transcript:EMLSAT00000001531 description:"maker-LSalAtl2s1264-snap-gene-0.3")

HSP 1 Score: 124.405 bits (311), Expect = 2.841e-34
Identity = 68/123 (55.28%), Postives = 83/123 (67.48%), Query Frame = 0

Query:   51 RWLKEVDQH----APGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEK-IQKNLKS 168
            +W +E+  H     P   + +     +   ++   Q E E YAEKN MGFFEVSPL NFNISESF E+ARMALKRNG+E+LWR NKVSSLYEL A +IVN+T+VY   + PL EK IQK L S
Sbjct:    4 KWTREILHHNQILLPWSTRNITSVPTNGHLKKTSRQNEVEDYAEKNSMGFFEVSPLVNFNISESFIELARMALKRNGIEKLWRLNKVSSLYELXADTIVNRTSVYFAVKWPLGEKRIQKGLIS 126

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BLAST of ras-related protein rab-40c vs. L. salmonis genes
Match: EMLSAG00000001458 (supercontig:LSalAtl2s:LSalAtl2s1248:131241:136261:1 gene:EMLSAG00000001458 transcript:EMLSAT00000001458 description:"maker-LSalAtl2s1248-augustus-gene-0.13")

HSP 1 Score: 107.071 bits (266), Expect = 3.118e-29
Identity = 52/123 (42.28%), Postives = 80/123 (65.04%), Query Frame = 0

Query:    2 IDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHA-PGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNG 123
            +DGK +KLQ+WDT+GQ RF TI  SY RGA GI++VYD+T++ SF  + +WL+E+D++A   + K+L+GN+  L  ++ VD   A+ YA++  M F E S     N+ ++F  +A     R G
Sbjct:   52 LDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAEIKNRVG 174

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BLAST of ras-related protein rab-40c vs. L. salmonis genes
Match: EMLSAG00000009511 (supercontig:LSalAtl2s:LSalAtl2s612:149458:156023:-1 gene:EMLSAG00000009511 transcript:EMLSAT00000009511 description:"maker-LSalAtl2s612-snap-gene-1.42")

HSP 1 Score: 111.694 bits (278), Expect = 3.885e-29
Identity = 55/131 (41.98%), Postives = 87/131 (66.41%), Query Frame = 0

Query:    2 IDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPG-IPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSN 131
            +DGK++KLQ+WDT+GQ RF TI  +Y RGA GI+LVYDITN  SF+ I  W++ +++HA   + K+++GN+  +  +R+V + + E  A + G+ F E S  ++ N+ E+F  +AR  +K    +RL  SN
Sbjct:   93 LDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEHASADVEKMILGNKCDINDRRKVTKEKGEDLAIEYGIKFMETSAKSSINVEEAFFTLAR-DIKAKMEKRLEASN 222

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BLAST of ras-related protein rab-40c vs. L. salmonis genes
Match: EMLSAG00000005149 (supercontig:LSalAtl2s:LSalAtl2s272:1903:7665:1 gene:EMLSAG00000005149 transcript:EMLSAT00000005149 description:"snap_masked-LSalAtl2s272-processed-gene-0.5")

HSP 1 Score: 105.531 bits (262), Expect = 1.095e-28
Identity = 53/126 (42.06%), Postives = 77/126 (61.11%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHA-PGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESF----AEVARMALKR 121
            ++DGK VK Q+WDT+GQ R+  I  +Y RGA G LLVYDI    ++E +DRWL+E+  HA   I  +L+GN+  L   R V   EA+ +AE+N + F E S L + N+  +F     E+ R+  +R
Sbjct:   37 IVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGNKCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQR 162

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BLAST of ras-related protein rab-40c vs. L. salmonis genes
Match: EMLSAG00000003241 (supercontig:LSalAtl2s:LSalAtl2s178:231454:232215:-1 gene:EMLSAG00000003241 transcript:EMLSAT00000003241 description:"augustus_masked-LSalAtl2s178-processed-gene-2.6")

HSP 1 Score: 97.0561 bits (240), Expect = 2.129e-25
Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 0

Query:    2 IDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPG--IPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVAR 116
            + G RVKL +WDT+GQ RF T+  SY RG QG +LVYD+TN+ SF  ++ WL E+D +A    I K+L+GN+  LE +R + + E +  A K+ M F E S      +  +F E+  
Sbjct:   53 VQGNRVKLAIWDTAGQERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVENWLNELDTYATNHDIVKMLVGNKCDLEEKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAFEELVE 169

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BLAST of ras-related protein rab-40c vs. L. salmonis genes
Match: EMLSAG00000003441 (supercontig:LSalAtl2s:LSalAtl2s188:620675:622456:-1 gene:EMLSAG00000003441 transcript:EMLSAT00000003441 description:"maker-LSalAtl2s188-augustus-gene-6.40")

HSP 1 Score: 98.2117 bits (243), Expect = 2.830e-25
Identity = 47/114 (41.23%), Postives = 70/114 (61.40%), Query Frame = 0

Query:    4 GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEV-DQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVAR 116
            G+++KLQ+WDT+GQ RF  + RSY RGA G +LVYD+T + ++  +  WL +  +   P     LIGN+  LE QR V   EA  +AE+NG+ F E S     ++ ++F E A+
Sbjct:  105 GQKIKLQIWDTAGQERFRAVTRSYYRGAAGAILVYDVTRRHTYNHLSSWLTDARNLTNPNTVIFLIGNKCDLEGQRDVSHEEARQFAEENGLMFVEASAKTGQHVEDAFLETAK 218

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BLAST of ras-related protein rab-40c vs. L. salmonis genes
Match: EMLSAG00000011153 (supercontig:LSalAtl2s:LSalAtl2s759:225438:227635:-1 gene:EMLSAG00000011153 transcript:EMLSAT00000011153 description:"maker-LSalAtl2s759-augustus-gene-2.13")

HSP 1 Score: 95.9005 bits (237), Expect = 7.484e-25
Identity = 47/116 (40.52%), Postives = 71/116 (61.21%), Query Frame = 0

Query:    2 IDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHA-PGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVAR 116
            +D   VK ++WDT+GQ R+ ++   Y RGAQ  ++VYD+TN+ SF     W+KE+ + A P I   L GN+  L  +R V   EA+ YAE+NG+ F E S     N+++ F E+A+
Sbjct:   65 LDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDVTNQDSFIRAKNWVKELQRQASPNIVIALAGNKADLNTKRLVIYEEAQTYAEENGLLFMETSAKTALNVNDVFLEIAK 180

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BLAST of ras-related protein rab-40c vs. L. salmonis genes
Match: EMLSAG00000012618 (supercontig:LSalAtl2s:LSalAtl2s94:53587:63698:1 gene:EMLSAG00000012618 transcript:EMLSAT00000012618 description:"maker-LSalAtl2s94-augustus-gene-0.17")

HSP 1 Score: 90.5077 bits (223), Expect = 1.291e-21
Identity = 42/121 (34.71%), Postives = 79/121 (65.29%), Query Frame = 0

Query:    2 IDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHA-PGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKR 121
            I G+++KLQ+WDT+GQ R  +I +SY R A  ++LV+D++N+ +F+    WL+E++++A P + KVL+GN+   +  R++ +   E +A++  M + E S  +  N+   F E+A+  L++
Sbjct:  282 IQGEKIKLQIWDTAGQERXRSITQSYYRSAHALILVFDVSNQPTFDSCPEWLREIEEYASPKVLKVLVGNKTDRD-DREIPEEIGEDFAQRYSMYYLETSAKSCDNVERLFVEIAQELLQQ 401

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BLAST of ras-related protein rab-40c vs. L. salmonis genes
Match: EMLSAG00000009140 (supercontig:LSalAtl2s:LSalAtl2s575:76921:96103:-1 gene:EMLSAG00000009140 transcript:EMLSAT00000009140 description:"maker-LSalAtl2s575-augustus-gene-1.16")

HSP 1 Score: 87.8113 bits (216), Expect = 2.725e-21
Identity = 41/112 (36.61%), Postives = 65/112 (58.04%), Query Frame = 0

Query:    4 GKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVA 115
            G+ V+L LWDT+GQ  F  I R+Y RGAQ  ++V+   ++ SF  + +W ++V+     IP VL+ N++ L  + QVD  E E +A   G+  F  S   N N+++ F  +A
Sbjct:   64 GEDVRLMLWDTAGQEEFDAITRAYYRGAQACVIVFSTIDRPSFAAVKKWKRKVEDECGHIPMVLVQNKIDLLHETQVDNTEIEKFARNMGLKLFRTSVKENLNVNKVFQLLA 175

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BLAST of ras-related protein rab-40c vs. SwissProt
Match: gi|27734453|sp|Q12829.1|RB40B_HUMAN (RecName: Full=Ras-related protein Rab-40B; AltName: Full=SOCS box-containing protein RAR; Short=Protein Rar)

HSP 1 Score: 265.003 bits (676), Expect = 1.666e-88
Identity = 124/219 (56.62%), Postives = 165/219 (75.34%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYALTN--YSTLRPGSQYK---SIKHKRHKLR--------LSTPADASKVSC 206
            L+DG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+GIDRW+KE+D+HAPG+PK+L+GNRLHL F+RQV   +A+ YAE+ G+ FFEVSPL NFNI+ESF E+AR+ L R+GM+RLWR +KV SL +LC  ++V+ T V+ +D+LPLP  ++ +LKS+++ N   + +  G  Y    S  HKR  LR         S P + ++ SC
Sbjct:   57 LLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSKVLSLQDLCCRAVVSCTPVHLVDKLPLPIALRSHLKSFSMANGLNARMMHGGSYSLTTSSTHKRSSLRKVKLVRPPQSPPKNCTRNSC 275

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BLAST of ras-related protein rab-40c vs. SwissProt
Match: gi|27734456|sp|Q8VHQ4.1|RB40C_MOUSE (RecName: Full=Ras-related protein Rab-40C; AltName: Full=SOCS box-containing protein RAR3)

HSP 1 Score: 263.462 bits (672), Expect = 6.168e-88
Identity = 115/173 (66.47%), Postives = 147/173 (84.97%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYALTN 173
            L+DG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSF+GIDRW+KE+D+HAPG+P++L+GNRLHL F+RQV   +A  YAEKN M FFEVSPL NFN+ ESF E++R+ L R+GME++WR N+V SL +LC  +IV+ T V+ ID+LPLP  I+ +LKS+++ N
Sbjct:   57 LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSMAN 229

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BLAST of ras-related protein rab-40c vs. SwissProt
Match: gi|27734457|sp|Q96S21.1|RB40C_HUMAN (RecName: Full=Ras-related protein Rab-40C; AltName: Full=Rar-like protein; AltName: Full=Ras-like protein family member 8C; AltName: Full=SOCS box-containing protein RAR3)

HSP 1 Score: 263.462 bits (672), Expect = 6.658e-88
Identity = 115/173 (66.47%), Postives = 147/173 (84.97%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYALTN 173
            L+DG+RVKL+LWDTSGQGRFCTI RSYSRGAQGILLVYDITN+WSF+GIDRW+KE+D+HAPG+P++L+GNRLHL F+RQV   +A  YAEKN M FFEVSPL NFN+ ESF E++R+ L R+GME++WR N+V SL +LC  +IV+ T V+ ID+LPLP  I+ +LKS+++ N
Sbjct:   57 LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSMAN 229

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BLAST of ras-related protein rab-40c vs. SwissProt
Match: gi|27734455|sp|Q8VHP8.1|RB40B_MOUSE (RecName: Full=Ras-related protein Rab-40B; AltName: Full=SOCS box-containing protein RAR)

HSP 1 Score: 256.529 bits (654), Expect = 3.542e-85
Identity = 121/219 (55.25%), Postives = 162/219 (73.97%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYAL-----TNYSTLRPGSQYKSIKHKRHKLR--------LSTPADASKVSC 206
            L+DG+RVKLQLWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSF+GI+RW+KE+D+HAPG+PK+L+GNRLHL F+RQV   +A+ YAE+ G+ FFEVSPL NFNI+ESF E+AR+ L R+GM+RLWR +KV SL ELC  ++V+ T  + +D+LPLP  ++ +LKS+++     T     R  S   +  HKR+  R         S P + ++ SC
Sbjct:   57 LLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVVLVYDIANRWSFDGINRWIKEIDEHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELARIVLLRHGMDRLWRPSKVLSLQELCCRAVVSCTPGHLVDKLPLPVALRSHLKSFSMASGLNTRMMHGRSYSLTANSSHKRNSFRKVRTIRPPQSPPRNCARNSC 275

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BLAST of ras-related protein rab-40c vs. SwissProt
Match: gi|83287759|sp|Q8WXH6.2|RB40A_HUMAN (RecName: Full=Ras-related protein Rab-40A; AltName: Full=SOCS box-containing protein RAR2A; Short=Protein Rar-2; Flags: Precursor)

HSP 1 Score: 243.432 bits (620), Expect = 5.057e-80
Identity = 117/219 (53.42%), Postives = 158/219 (72.15%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYALT---NYSTLRPGSQYKSIKHKRHKLRL----------STPADASKVSC 206
            L+DG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFEG+DRW+K++++HAPG+PK+L+GNRLHL F+RQV + +A+ YAE+ G+ FFEVSPL NFNI ESF E+AR+ L R+ M  L R +KV SL +LC  +IV+ T V+ +D+LPLP  ++ +LKS+++    N   +R G  Y       HK  L          S P + ++ SC
Sbjct:   57 LLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRMNWLGRPSKVLSLQDLCCRTIVSCTPVHLVDKLPLPSTLRSHLKSFSMAKGLNARMMR-GLSYSLTTSSTHKSSLCKVEIVCPPQSPPKNCTRNSC 274

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BLAST of ras-related protein rab-40c vs. SwissProt
Match: gi|83287760|sp|P0C0E4.1|RB40L_HUMAN (RecName: Full=Ras-related protein Rab-40A-like; AltName: Full=Ras-like GTPase)

HSP 1 Score: 240.35 bits (612), Expect = 6.693e-79
Identity = 116/215 (53.95%), Postives = 160/215 (74.42%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYALT---NYSTLRPGSQYK---SIKHKRH---KLRLSTPADASKVSC 206
            L+DG+RVKL+LWDTSGQGRFCTI RSYSRGAQG++LVYDI N+WSFEG+DRW+K++++HAPG+PK+L+GNRLHL F+RQV + +A+ YAE+ G+ FFEVSPL NFNI ESF E+AR+ L R+ +  L R +KV SL +LC  +IV+ T V+ +D+LPLP  ++ +LKS+++    N   +R G  Y    S  HKR    K+++  P  +   +C
Sbjct:   57 LLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHAPGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELARIVLLRHRLNWLGRPSKVLSLQDLCCRTIVSCTPVHLVDKLPLPIALRSHLKSFSMAKGLNARMMR-GLSYSLTTSSTHKRSSLCKVKIVCPPQSPPKNC 270

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BLAST of ras-related protein rab-40c vs. SwissProt
Match: gi|75069879|sp|Q58DS5.1|RAB13_BOVIN (RecName: Full=Ras-related protein Rab-13; Flags: Precursor)

HSP 1 Score: 127.487 bits (319), Expect = 1.515e-35
Identity = 59/132 (44.70%), Postives = 95/132 (71.97%), Query Frame = 0

Query:    2 IDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHA-PGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNK 132
            I+GK++KLQ+WDT+GQ RF TI  +Y RGA GI+LVYDIT++ SFE I  W+K + ++A  G+ ++L+GN+  +E +R+V + +A+  A ++G+ FFE S  ++ N+ E+F+ +AR  L ++G  RL  +NK
Sbjct:   52 IEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLKNNNK 183

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BLAST of ras-related protein rab-40c vs. SwissProt
Match: gi|46577121|sp|Q9DD03.1|RAB13_MOUSE (RecName: Full=Ras-related protein Rab-13; Flags: Precursor)

HSP 1 Score: 124.79 bits (312), Expect = 1.643e-34
Identity = 61/135 (45.19%), Postives = 94/135 (69.63%), Query Frame = 0

Query:    2 IDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHA-PGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSS 135
            I+GKR+KLQ+WDT+GQ RF TI  +Y RGA GI+LVYDIT++ SFE I  W+K + ++A  G+ ++L+GN+  +E +RQV + +AE  A ++ + FFE S  ++ N+ E+F+ +AR  L + G  R   ++K SS
Sbjct:   52 IEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRSGTNSKPSS 186

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BLAST of ras-related protein rab-40c vs. SwissProt
Match: gi|1710016|sp|P51153.1|RAB13_HUMAN (RecName: Full=Ras-related protein Rab-13; AltName: Full=Cell growth-inhibiting gene 4 protein; Flags: Precursor)

HSP 1 Score: 124.405 bits (311), Expect = 1.801e-34
Identity = 58/132 (43.94%), Postives = 93/132 (70.45%), Query Frame = 0

Query:    2 IDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHA-PGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNK 132
            I+GK++KLQ+WDT+GQ RF TI  +Y RGA GI+LVYDIT++ SFE I  W+K + ++A  G+ ++L+GN+  +E +R+V + +A+  A ++G+ FFE S  ++ N+ E+F+ +AR  L ++G  R    NK
Sbjct:   52 IEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNK 183

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BLAST of ras-related protein rab-40c vs. SwissProt
Match: gi|46577668|sp|P35286.2|RAB13_RAT (RecName: Full=Ras-related protein Rab-13; Flags: Precursor)

HSP 1 Score: 124.405 bits (311), Expect = 2.233e-34
Identity = 61/135 (45.19%), Postives = 94/135 (69.63%), Query Frame = 0

Query:    2 IDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHA-PGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSS 135
            I+GKR+KLQ+WDT+GQ RF TI  +Y RGA GI+LVYDIT++ SFE I  W+K + ++A  G+ ++L+GN+  +E +R+V + +AE  A ++ + FFE S  ++ N+ E+F+ +AR  L + G  R   S+K SS
Sbjct:   52 IEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGRRSGNSSKPSS 186

[Close]

BLAST of ras-related protein rab-40c vs. nr
Match: gi|225712642|gb|ACO12167.1| (Ras-related protein Rab-40C [Lepeophtheirus salmonis] >gi|290561807|gb|ADD38301.1| Ras-related protein Rab-40C [Lepeophtheirus salmonis])

HSP 1 Score: 333.569 bits (854), Expect = 7.651e-113
Identity = 165/228 (72.37%), Postives = 185/228 (81.14%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYALTN---------YSTLRPGSQYKSIKHKRHKLRL-----STPADASKVSCGSGRKCLV 214
            LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGI+RWLKEVD HAPGIPKVLIGNRLHL F+RQVDQ EAE YAEKN MGFFEVSPL NFNISESF E+ARMALKRNGMERLWR NKVSSLYELCAH+IVN+T+VYGID+LPLP+ +Q+NLKSYAL+           S+      YKS++  + + R       TPADA+K   G  + C++
Sbjct:   72 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGINRWLKEVDDHAPGIPKVLIGNRLHLAFRRQVDQNEAEDYAEKNSMGFFEVSPLVNFNISESFIELARMALKRNGMERLWRLNKVSSLYELCAHTIVNRTSVYGIDKLPLPQSVQQNLKSYALSTSSGQNSSISSSSFVGSGSYKSLRSNKRRSRPLNYHNRTPADAAKAELGR-KSCVI 298

[Close]

BLAST of ras-related protein rab-40c vs. nr
Match: gi|1061477152|gb|ODM94913.1| (Ras-related protein Rab-40C [Orchesella cincta])

HSP 1 Score: 310.842 bits (795), Expect = 2.498e-104
Identity = 146/216 (67.59%), Postives = 177/216 (81.94%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYALTNYSTLRPGSQYKSI--KHKRHKLRLSTPADASKVSCGSGRKCLV 214
            L+DGK+VKLQ+WDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSF+G+DRWL+EV++HAPG+PKVLIGNRLHLEF+RQV   +AE YA K+ MGFFEVSPL NFNI ESF E++RMAL+RNGMERLWRSNKV  L ELC  +IV+ TTVYGI++LPLP  ++  LKSYA+  YST     QY+S+  K    KL+  TP+DA+  SC + + C++
Sbjct:   58 LLDGKKVKLQVWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGLDRWLQEVEEHAPGVPKVLIGNRLHLEFKRQVSVLDAEEYAIKHKMGFFEVSPLCNFNIMESFVELSRMALQRNGMERLWRSNKVLKLKELCCRAIVSHTTVYGIEQLPLPNNLKSYLKSYAMNRYST-----QYRSLPTKFPSKKLKFLTPSDAANTSCATKKSCVI 268

[Close]

BLAST of ras-related protein rab-40c vs. nr
Match: gi|1227978243|ref|XP_021920676.1| (ras-related protein Rab-40C [Zootermopsis nevadensis] >gi|646715443|gb|KDR19055.1| Ras-related protein Rab-40C [Zootermopsis nevadensis])

HSP 1 Score: 304.294 bits (778), Expect = 3.195e-101
Identity = 140/176 (79.55%), Postives = 159/176 (90.34%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYALTNYST 176
            L+DGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSF+GIDRWLKEV++HAPG+PKVL+GNRLHL F+RQV  +EAEIYA KN M FFEVSPL NFNI ESF+E++RMAL RNGMERLWRSNKV SL ELC  +IV +TTVYGID+LPLP  I+ +LKSYA+T+Y+T
Sbjct:   58 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFKRQVRAQEAEIYAAKNRMAFFEVSPLCNFNIRESFSELSRMALHRNGMERLWRSNKVLSLQELCCRAIVARTTVYGIDQLPLPTAIKSHLKSYAMTSYTT 233

[Close]

BLAST of ras-related protein rab-40c vs. nr
Match: gi|665812960|ref|XP_008555018.1| (PREDICTED: ras-related protein Rab-40C isoform X2 [Microplitis demolitor])

HSP 1 Score: 302.753 bits (774), Expect = 8.787e-101
Identity = 150/232 (64.66%), Postives = 178/232 (76.72%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYALTNYSTLRPG---SQYKSIKHKRHKLR--------LSTPADA------SKVSCGSGRKCLVS 215
            L+DGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSF+GIDRWLKEV++HAPG+PKVL+GNRLHL F+RQV +REAE+YA KN M FFEVSPL +FNI ESF+E++RMAL RNGMERLWRSNKV +L EL   +IV +TTVY ID+LPLP+ I+ +LKSYA+T  S LR     +  KS+     KLR        L+TP ++      S+ SC     C +S
Sbjct:   59 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFKRQVAEREAEVYAAKNHMAFFEVSPLCDFNIRESFSELSRMALHRNGMERLWRSNKVLTLQELACRAIVARTTVYEIDQLPLPKSIKSHLKSYAMTTTSQLRCNRSQNSSKSLGSHHRKLRFVGAGHNGLTTPGNSPGSITDSRSSCAGRNSCAIS 290

[Close]

BLAST of ras-related protein rab-40c vs. nr
Match: gi|1339081866|ref|XP_023701950.1| (ras-related protein Rab-40C [Cryptotermes secundus] >gi|1330926317|gb|PNF39378.1| Ras-related protein Rab-40C [Cryptotermes secundus])

HSP 1 Score: 303.138 bits (775), Expect = 9.122e-101
Identity = 139/176 (78.98%), Postives = 158/176 (89.77%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYALTNYST 176
            L+DGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSF+GIDRWLKEV++HAPG+PKVL+GNRLHL F+RQV  REAE YA KN M FFEVSPL +FNI ESF+E++RMAL RNGMERLWRSNKV SL ELC  +IV +TTVYGID+LPLP  I+ +LKSYA+T+Y+T
Sbjct:   58 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFKRQVGAREAETYAAKNRMAFFEVSPLCDFNIRESFSELSRMALHRNGMERLWRSNKVLSLQELCCRAIVARTTVYGIDQLPLPTAIKSHLKSYAMTSYTT 233

[Close]

BLAST of ras-related protein rab-40c vs. nr
Match: gi|795107966|ref|XP_011881959.1| (PREDICTED: ras-related protein Rab-40C [Vollenhovia emeryi])

HSP 1 Score: 302.753 bits (774), Expect = 9.621e-101
Identity = 154/234 (65.81%), Postives = 177/234 (75.64%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYALTNYSTLRPG-----SQYKSIKHKRHKLR--------LSTPADA------SKVSCGSGRKCLVS 215
            L+DGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSF+GI+RWLKEV++HAPG+PKVL+GNRLHL F+RQV +R+AE YA KN M FFEVSPL NFNI ESF+E++RMAL RNGMERLWRSNKV SL EL   +IV +TTVYGID+LPLP+ I+ +LKSYA+T  S LR       S  KS+     KLR        LSTP  +      S+ SC     C VS
Sbjct:   63 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGINRWLKEVEEHAPGVPKVLVGNRLHLAFKRQVGERDAEAYAAKNRMAFFEVSPLCNFNIRESFSELSRMALHRNGMERLWRSNKVLSLQELACRAIVARTTVYGIDQLPLPKSIKSHLKSYAMTTTSQLRYNGNRSLSSSKSLGTHHRKLRFVGHSNGGLSTPGSSPGSIADSRTSCVGRNSCTVS 296

[Close]

BLAST of ras-related protein rab-40c vs. nr
Match: gi|1130263109|ref|XP_019770325.1| (PREDICTED: ras-related protein Rab-40B isoform X1 [Dendroctonus ponderosae])

HSP 1 Score: 301.982 bits (772), Expect = 1.132e-100
Identity = 147/223 (65.92%), Postives = 179/223 (80.27%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYALTNYSTLRPGSQYK-SIKHKRH--KLRLS----TPADA-SKVSCGSGRKCLVS 215
            L+DGKRVKLQLWDTSGQGRFCTIIRSYSRGAQG+LLVYDITN+WSF+G+DRWLKEVD HAPG+PKVL+GNRLHL F+R+V QR+A++YA K+ M FFEVSPL NFNI ESF E++RMAL+RNGMERLWRSNKV SL ELC  +IV +TTVY I++LPLP  ++ +LKSYALT+ +T     Q++ +  HK+H  KLRL+    TP    S+ SC     C +S
Sbjct:   59 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGVLLVYDITNRWSFDGLDRWLKEVDSHAPGVPKVLVGNRLHLAFKRKVSQRDAQLYANKHSMAFFEVSPLCNFNIHESFCELSRMALQRNGMERLWRSNKVLSLQELCCRAIVARTTVYSIEQLPLPTCVKSHLKSYALTSTNT----QQFRYTTNHKKHSRKLRLTSIPNTPGSMDSRTSCVPRNSCAIS 277

[Close]

BLAST of ras-related protein rab-40c vs. nr
Match: gi|1130263112|ref|XP_019770326.1| (PREDICTED: ras-related protein Rab-40B isoform X2 [Dendroctonus ponderosae] >gi|478250673|gb|ENN71165.1| hypothetical protein YQE_12095, partial [Dendroctonus ponderosae])

HSP 1 Score: 301.982 bits (772), Expect = 1.275e-100
Identity = 147/223 (65.92%), Postives = 179/223 (80.27%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYALTNYSTLRPGSQYK-SIKHKRH--KLRLS----TPADA-SKVSCGSGRKCLVS 215
            L+DGKRVKLQLWDTSGQGRFCTIIRSYSRGAQG+LLVYDITN+WSF+G+DRWLKEVD HAPG+PKVL+GNRLHL F+R+V QR+A++YA K+ M FFEVSPL NFNI ESF E++RMAL+RNGMERLWRSNKV SL ELC  +IV +TTVY I++LPLP  ++ +LKSYALT+ +T     Q++ +  HK+H  KLRL+    TP    S+ SC     C +S
Sbjct:   57 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGVLLVYDITNRWSFDGLDRWLKEVDSHAPGVPKVLVGNRLHLAFKRKVSQRDAQLYANKHSMAFFEVSPLCNFNIHESFCELSRMALQRNGMERLWRSNKVLSLQELCCRAIVARTTVYSIEQLPLPTCVKSHLKSYALTSTNT----QQFRYTTNHKKHSRKLRLTSIPNTPGSMDSRTSCVPRNSCAIS 275

[Close]

BLAST of ras-related protein rab-40c vs. nr
Match: gi|665812956|ref|XP_008555016.1| (PREDICTED: ras-related protein Rab-40B isoform X1 [Microplitis demolitor] >gi|665812958|ref|XP_008555017.1| PREDICTED: ras-related protein Rab-40B isoform X1 [Microplitis demolitor] >gi|939653962|ref|XP_014296707.1| PREDICTED: ras-related protein Rab-40B isoform X1 [Microplitis demolitor])

HSP 1 Score: 301.982 bits (772), Expect = 2.357e-100
Identity = 150/232 (64.66%), Postives = 178/232 (76.72%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYALTNYSTLRPG---SQYKSIKHKRHKLR--------LSTPADA------SKVSCGSGRKCLVS 215
            L+DGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSF+GIDRWLKEV++HAPG+PKVL+GNRLHL F+RQV +REAE+YA KN M FFEVSPL +FNI ESF+E++RMAL RNGMERLWRSNKV +L EL   +IV +TTVY ID+LPLP+ I+ +LKSYA+T  S LR     +  KS+     KLR        L+TP ++      S+ SC     C +S
Sbjct:   65 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFDGIDRWLKEVEEHAPGVPKVLVGNRLHLAFKRQVAEREAEVYAAKNHMAFFEVSPLCDFNIRESFSELSRMALHRNGMERLWRSNKVLTLQELACRAIVARTTVYEIDQLPLPKSIKSHLKSYAMTTTSQLRCNRSQNSSKSLGSHHRKLRFVGAGHNGLTTPGNSPGSITDSRSSCAGRNSCAIS 296

[Close]

BLAST of ras-related protein rab-40c vs. nr
Match: gi|987900937|ref|XP_015435118.1| (PREDICTED: ras-related protein Rab-40B [Dufourea novaeangliae] >gi|1016157478|gb|KZC04640.1| Ras-related protein Rab-40C [Dufourea novaeangliae])

HSP 1 Score: 300.827 bits (769), Expect = 7.026e-100
Identity = 152/235 (64.68%), Postives = 176/235 (74.89%), Query Frame = 0

Query:    1 LIDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGILLVYDITNKWSFEGIDRWLKEVDQHAPGIPKVLIGNRLHLEFQRQVDQREAEIYAEKNGMGFFEVSPLANFNISESFAEVARMALKRNGMERLWRSNKVSSLYELCAHSIVNQTTVYGIDRLPLPEKIQKNLKSYALTNYSTLRPGSQ------YKSIKHKRHKLR--------LSTPADA------SKVSCGSGRKCLVS 215
            L+DGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGI+LVYDITNKWSF+GIDRWLKEVD+HAPG+PKVL+GNRLHL F+RQV +R+AE YA KN M FFEVSPL NFNI ESF+E++RMAL RNGMERLWRSNKV SL EL   +IV +TTVYGID+LPLP+ I+ +LKSYA+T  S LR               H R KLR        LSTP  +      ++ SC     C++S
Sbjct:   61 LLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQGIILVYDITNKWSFDGIDRWLKEVDEHAPGVPKVLVGNRLHLAFKRQVGERDAETYAAKNHMAFFEVSPLCNFNIRESFSELSRMALHRNGMERLWRSNKVLSLQELACRAIVARTTVYGIDQLPLPKSIKSHLKSYAMTTTSQLRYNGNRSLSSSKSLGSHHR-KLRFVGVGYNGLSTPGSSPGSITDARTSCVGRNSCVIS 294

The following BLAST results are available for this feature:

BLAST of ras-related protein rab-40c vs. L. salmonis genes
BLAST of ras-related protein rab-40c vs. SwissProt
BLAST of ras-related protein rab-40c vs. nr

BLAST of ras-related protein rab-40c vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000006352	8.697e-76	79.39	supercontig:LSalAtl2s:LSalAtl2s346:685315:686337:-...	[more]
EMLSAG00000001531	2.841e-34	55.28	supercontig:LSalAtl2s:LSalAtl2s1264:43928:52914:-1...	[more]
EMLSAG00000001458	3.118e-29	42.28	supercontig:LSalAtl2s:LSalAtl2s1248:131241:136261:...	[more]
EMLSAG00000009511	3.885e-29	41.98	supercontig:LSalAtl2s:LSalAtl2s612:149458:156023:-...	[more]
EMLSAG00000005149	1.095e-28	42.06	supercontig:LSalAtl2s:LSalAtl2s272:1903:7665:1 gen...	[more]
EMLSAG00000003241	2.129e-25	41.88	supercontig:LSalAtl2s:LSalAtl2s178:231454:232215:-...	[more]
EMLSAG00000003441	2.830e-25	41.23	supercontig:LSalAtl2s:LSalAtl2s188:620675:622456:-...	[more]
EMLSAG00000011153	7.484e-25	40.52	supercontig:LSalAtl2s:LSalAtl2s759:225438:227635:-...	[more]
EMLSAG00000012618	1.291e-21	34.71	supercontig:LSalAtl2s:LSalAtl2s94:53587:63698:1 ge...	[more]
EMLSAG00000009140	2.725e-21	36.61	supercontig:LSalAtl2s:LSalAtl2s575:76921:96103:-1 ...	[more]

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BLAST of ras-related protein rab-40c vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|27734453\|sp\|Q12829.1\|RB40B_HUMAN	1.666e-88	56.62	RecName: Full=Ras-related protein Rab-40B; AltName...	[more]
gi\|27734456\|sp\|Q8VHQ4.1\|RB40C_MOUSE	6.168e-88	66.47	RecName: Full=Ras-related protein Rab-40C; AltName...	[more]
gi\|27734457\|sp\|Q96S21.1\|RB40C_HUMAN	6.658e-88	66.47	RecName: Full=Ras-related protein Rab-40C; AltName...	[more]
gi\|27734455\|sp\|Q8VHP8.1\|RB40B_MOUSE	3.542e-85	55.25	RecName: Full=Ras-related protein Rab-40B; AltName...	[more]
gi\|83287759\|sp\|Q8WXH6.2\|RB40A_HUMAN	5.057e-80	53.42	RecName: Full=Ras-related protein Rab-40A; AltName...	[more]
gi\|83287760\|sp\|P0C0E4.1\|RB40L_HUMAN	6.693e-79	53.95	RecName: Full=Ras-related protein Rab-40A-like; Al...	[more]
gi\|75069879\|sp\|Q58DS5.1\|RAB13_BOVIN	1.515e-35	44.70	RecName: Full=Ras-related protein Rab-13; Flags: P...	[more]
gi\|46577121\|sp\|Q9DD03.1\|RAB13_MOUSE	1.643e-34	45.19	RecName: Full=Ras-related protein Rab-13; Flags: P...	[more]
gi\|1710016\|sp\|P51153.1\|RAB13_HUMAN	1.801e-34	43.94	RecName: Full=Ras-related protein Rab-13; AltName:...	[more]
gi\|46577668\|sp\|P35286.2\|RAB13_RAT	2.233e-34	45.19	RecName: Full=Ras-related protein Rab-13; Flags: P...	[more]

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BLAST of ras-related protein rab-40c vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|225712642\|gb\|ACO12167.1\|	7.651e-113	72.37	Ras-related protein Rab-40C [Lepeophtheirus salmon...	[more]
gi\|1061477152\|gb\|ODM94913.1\|	2.498e-104	67.59	Ras-related protein Rab-40C [Orchesella cincta]	[more]
gi\|1227978243\|ref\|XP_021920676.1\|	3.195e-101	79.55	ras-related protein Rab-40C [Zootermopsis nevadens...	[more]
gi\|665812960\|ref\|XP_008555018.1\|	8.787e-101	64.66	PREDICTED: ras-related protein Rab-40C isoform X2 ...	[more]
gi\|1339081866\|ref\|XP_023701950.1\|	9.122e-101	78.98	ras-related protein Rab-40C [Cryptotermes secundus...	[more]
gi\|795107966\|ref\|XP_011881959.1\|	9.621e-101	65.81	PREDICTED: ras-related protein Rab-40C [Vollenhovi...	[more]
gi\|1130263109\|ref\|XP_019770325.1\|	1.132e-100	65.92	PREDICTED: ras-related protein Rab-40B isoform X1 ...	[more]
gi\|1130263112\|ref\|XP_019770326.1\|	1.275e-100	65.92	PREDICTED: ras-related protein Rab-40B isoform X2 ...	[more]
gi\|665812956\|ref\|XP_008555016.1\|	2.357e-100	64.66	PREDICTED: ras-related protein Rab-40B isoform X1 ...	[more]
gi\|987900937\|ref\|XP_015435118.1\|	7.026e-100	64.68	PREDICTED: ras-related protein Rab-40B [Dufourea n...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold300_size216557	supercontig	scaffold300_size216557:87518..89600 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold300_size216557-snap-gene-1.27-mRNA-1	maker-scaffold300_size216557-snap-gene-1.27-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold300_size216557:87518..89600+

gene from alignment at scaffold300_size216557:87518..89600+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold300_size216557-snap-gene-1.27 ID=maker-scaffold300_size216557-snap-gene-1.27|Name=ras-related protein rab-40c|organism=Tigriopus kingsejongensis|type=gene|length=2083bp|location=Sequence derived from alignment at scaffold300_size216557:87518..89600+ (Tigriopus kingsejongensis)
CTTCCAAACAGACGATCATTTTGATTGATGGAAAGCGCGTCAAGCTACAA
CTCTGGGACACGAGTGGTCAAGGAAGGTTTTGCACTATCATTCGCTCCTA
CTCTCGGGGCGCTCAAGGCATTCTATTGGTGTACGACATCACCAACAAAT
GGTCGTTCGAAGGCATCGATCGCTGGTTGAAAGAAGTGGACCAGGTAAGG
TCGAACATCTTGGCTCATGCCGAAGCGCCAATAGAAATGTTCCCCGTTTT
TCCAGCATGCGCCCGGCATTCCCAAGGTGCTCATTGGCAATCGGCTTCAT
TTGGAATTTCAACGGCAGGTGGACCAGCGCGAGGCGGAAATCTATGCCGA
GAAGAATGGCATGGGCTTCTTCGAGGTGTCTCCCCTAGCCAATTTCAACA
TTTCTGAGAGCTTTGCCGAGGTGGCCAGGATGGCTCTAAAGCGGAATGGC
ATGGAAAGATTGTGGCGCTCCAACAAAGGTAATAACGGGCCGAGTGGAAA
CCTTCGTTAGCCCTCAGTGGCCGTAAATACTGAATAGCAGAGGGGGGCTT
TTTTTAGATAGTCGACCAGAAATAGAATATGGAATCGAATCCCATAGCAT
GGTAAGAATGGGGATGTATATCAATGTTTATCTTGAGCATACTTCCATTC
CCGACTTGGGGCAACTGAACTTGGCTGTGCCTCGCATCTCCACTGGAGCT
GAGCCAAGTAAACATAATCTAGCTTCTGGCCCACGAGCGAGTGGTGGGGA
GCTAATAGCTCTCGGAAGACCCGGGTGCGATTCTTAAGAGTTCCGATTGA
GAAACCACCATTGGGCAAATCATCTGGTCACTTCCCAGAGTGAGCAAATA
CGGGAGCCCTGATCCCTCGGCACTTCAGTAGGCCTAAATGTCCGGCACCT
TTAGTCTTATTAAGAACTGCATTAACATTGCCACGAATAACAGCATGTCA
AGATGGGGCGCCAACCGAGATTCTTGTGGTCTCAAGGAGTGTCTGGTGAA
TGTGCCACACTTGCCATGTACAGCTGCAATTGTGTTTTTTTTAACCTACC
GCGTAAGAAAAGGGAACGCTTTTCTGAGGGAAAGATAAGATATTCCTTCT
TAAGGGAAAATCGCCAACGACCATCGCTGATACCAGCGTGCTGGGGTATT
CAACTGAGGATTTTTTGAAAACTACTCGACAAATATAGATTTTTTTTGAT
AGCTTGCTAATCAATTGCAAGTTTTGGTCACATCATGGAGATGATTTAGT
ACCTCCATGGGTCACCCTGCGAAACAAAGCTGTTGGACATATTTCTTGCC
ATGTTGAAATTATCTTTCTTGCGTATTTCCTGAAATATTAGCCATTACTA
GGTGTAAAGATGAAGCGAAACCCTCAATTACTGGCGAAATCATCAATGAT
TCGGGTGAAATATTACCTACTTTCTGGTCAAAGCAACAAAAACCCAAATT
GTAATGCCTGGGTCGCTTATCTCGGTTCGGCACTCGTCGACGGCCCCGGA
GATGTCCACTGCCATATTTTGATCGTCAATATACCCACTTAGAATGTTTA
CTAAATCCTCAAAAAGGAACAAGTAGCCCCCCCCCCCCTGTTCCGGCTGT
CGAACCATTCGTTGGGAACAATGCAATCTCTTGGGCTACCATCGTTAGGC
ATGGCATTGTTTGAACCACGGGCGGACCTGAGTGGAGCTGTATTGTCTGT
TCGATATTCATGGAAACGCGATGAACCAGGAGCCAGGCTTACTCACACCC
TTGACGATTGTTTTCCAGTGTCTTCCCTCTACGAGCTCTGTGCTCATTCC
ATTGTGAACCAAACCACCGTCTACGGCATTGATCGCCTTCCCTTGCCGGA
GAAGATCCAGAAGAACCTTAAGTCTTACGCATTGACCAACTATTCCACCC
TCCGTCCCGGCTCCCAATACAAGAGCATAAAGCACAAGCGACACAAGCTG
CGGCTCTCGACGCCTGCAGACGCGAGCAAAGTGAGTTGTGGATCCGGGCG
GAAGTGCCTTGTCTCCTGAGGATCCCAATCGTGGTCCAAAGATGAATTCA
TTCTGACGCTTCCTTCGAGTGTGCAATTATCCA

Synonyms

The feature 'ras-related protein rab-40c' has the following synonyms


Synonym
Tk07145

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