pab-dependent poly -specific ribonuclease subunit pan2, maker-scaffold168_size293125-snap-gene-1.60 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. L. salmonis genes
Match: EMLSAG00000010753 (supercontig:LSalAtl2s:LSalAtl2s712:509674:515656:1 gene:EMLSAG00000010753 transcript:EMLSAT00000010753 description:"snap_masked-LSalAtl2s712-processed-gene-5.30") HSP 1 Score: 353.214 bits (905), Expect = 1.868e-104 Identity = 156/262 (59.54%), Postives = 204/262 (77.86%), Query Frame = 0 Query: 25 ESEDYEDQSYMPSSEFNLLNSVVGDGITKEKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFKVHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQSVRQGMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQV 286 E+E D Y+P +EF L+NSVVGDG K++++G++ + FD HEELLWMG++SGHVTSYYG Q QKYTSFQVHP + +RN+ T +QS+ +LT ++LRGQ RRG+P F +SS+NM+DMHSL+ N RT R+LMGG+QE L+++D S K+ V ++ SCA+LR H RF CCGD GK+ LRDP SL +AH+LDAH G L+DFDV+G+HLITCGQS+R G+ Q DRFLM+YD+RILRAISP+Q M+ PY LRF M SQ+ Sbjct: 742 ETEYDGDMMYIPQNEFKLVNSVVGDGTHKDREIGISTLAFDQHEELLWMGSRSGHVTSYYGTQFQKYTSFQVHPRDHIRNITTTEQSVLILTNTTLRGQHRRGVPQFNYSSKNMVDMHSLIVNNRTQRVLMGGMQESLVEYDIGSGKQVSV--VNTEGSCALLREHPRFTCCGDVPCGKIQLRDPRSLALAHSLDAHTGTLSDFDVHGHHLITCGQSLRHGIEQTDRFLMVYDMRILRAISPIQSMVVPYHLRFXQSMTSQI 1001
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. L. salmonis genes
Match: EMLSAG00000004308 (supercontig:LSalAtl2s:LSalAtl2s226:228505:231491:-1 gene:EMLSAG00000004308 transcript:EMLSAT00000004308 description:"maker-LSalAtl2s226-augustus-gene-2.26") HSP 1 Score: 74.7146 bits (182), Expect = 6.876e-14 Identity = 47/148 (31.76%), Postives = 81/148 (54.73%), Query Frame = 0 Query: 1026 MSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMI----SLKFLAWYFLSKKIQGDT--HDSIEDAVTALDL 1167 M + +IT + ++G P + ++ +VD+ T++SG+ DLD+ S+ TLK + L ++ + + IGH L NDF+V+ L+ ++V+D +L+ PH I SLK LA +L + IQ HD EDA+ +++L Sbjct: 417 MELVKITVI----SVDGSPVYESFVQPDSRIVDHNTRFSGVTAKDLDINSTK----TLKQVQRDLLRIISSDTVLIGHALDNDFRVLRLI--HDKVVDXAVLF--PHFXGIPXRRSLKSLAEIYLKRSIQTSERGHDPYEDALASVEL 552
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. L. salmonis genes
Match: EMLSAG00000004333 (supercontig:LSalAtl2s:LSalAtl2s227:69191:76584:1 gene:EMLSAG00000004333 transcript:EMLSAT00000004333 description:"maker-LSalAtl2s227-snap-gene-0.27") HSP 1 Score: 63.929 bits (154), Expect = 2.510e-10 Identity = 47/146 (32.19%), Postives = 72/146 (49.32%), Query Frame = 0 Query: 1028 VARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHR----MISLKFLAWYFLSKKIQGDT--HDSIEDAVTALDL 1167 + R+T + GK + + +V+DY T++SGI DL+ TT+ L + + I IGH L++D K + +V + V+DT +++ PH +LK LA L + IQ D HDS EDA+ ALDL Sbjct: 1085 LTRVTVINYEGKT----VYETMVKPSRDVIDYNTRFSGITQKDLE-----NVTTTIIDVQAVLLSMFSSDTILIGHSLESDLKALKMVHSM--VVDTSIVF--PHKMGPPYKRALKHLAAEHLKRIIQNDVGGHDSAEDALAALDL 1217
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. SwissProt
Match: gi|1248310759|sp|A1Z7K9.1|PAN2_DROME (RecName: Full=PAN2-PAN3 deadenylation complex catalytic subunit PAN2; AltName: Full=PAB1P-dependent poly(A)-specific ribonuclease; AltName: Full=Poly(A)-nuclease deadenylation complex subunit 2; Short=PAN deadenylation complex subunit 2) HSP 1 Score: 973.385 bits (2515), Expect = 0.000e+0 Identity = 533/1225 (43.51%), Postives = 735/1225 (60.00%), Query Frame = 0 Query: 39 EFNLLNSVVGDGITKEKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFKVHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQSVRQGMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDTADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSSVE--EPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRYANVFAKDIKECDPKH---GAFDNHSPGIQSIPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHTCERENCVVCELSFLFHMMDISPG-LPCQSSNFLRALRTIPEASALSLVFSDQHSMWACNVPRLIQSWNRFILHQI-------SNQLNVYELGLPSATRRRYRNSSSGSSGSR-SSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYP----DGKPNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAE--DIGDKLRRIGVSWIPEEIELNLLENGDVK---------------SSAEKTESKVVETRKYHLLSICYTILDPTTNQAHNVVAAINVGQYYHA-RIAS----PVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQ----------------------CTGELPFLKEVAFKNPITEKVFRTPRSLLSRGRKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVPED 1201 E+ L V+ DG + GV+++ FD +EELLWMG + GHVTSYY +QKYTSFQVH T+ VR++ TLD + LTQ+SLR Q+RRG+P FT S NM +M S+L R++M G+Q++LIDFD + KE ++ + G C +LR ++R++ GD G V LRD SL V HT+ H +L+DF V GN LI+CG S RQ DRFLM+YDLR+LR I+P+QVMI P L+FLP + SQ+A++SS GQVQLVDT +++ P ++++Q+ G +S DIS S+Q +AFGD + I++ ++V+ +P N Y+R TEFAD P +SI D SS+ P+L T T + SD WP+ + Y IDPE+L +MK+ G IGY+ N +RNQ+ Y + C P A G++ IP YRK+ +K K+ +FDFD+ N+T F GLEA LPNSYCNAMLQ LY+T+ R+ L H+C +E C+ CEL FLF+M+D S PCQ+SNFLR+ RT+PEASAL L+ +D+ S N+ LIQ+WNRFILHQ+ S + Y + ++T SS S S S + S + + + ++ + D+ S+++G Q N C KC+ E LL CNL YP D F ++ SL ++++ A+C+ CKK+ PTNQS KV SLP LS+N G++N +D+ F Q+ R + + + +L +KPCRYG +C+R DC F HP+++ + ++ + + SW P + + + G+V+ EK +K ++ + + L +D T + N+V+ INV + YH ++A P SQWY FND SIS + P+E+ W L WK+PCIL Y+ E NP E++ +L PL DEMP+ GDLVA+DAEFVTLN EE+E+R DGK ATIK HMSVARI+C+RG G EGVPF+DDYISTQE+VVDY+T++SGI PGDLD S K LT LK +Y+KL+YLVD G IF+GHGLKNDF+VIN+ VP EQ+IDTV L+H+PHHRM+SL+FLAW+FL KIQ +THDSIEDA T L LYK Y++L+ + L NLY+RGK L WKVPED Sbjct: 47 EYVELVPVLADG---GEHFGVSSVAFDDYEELLWMGNQGGHVTSYYTNSMQKYTSFQVHATDIVRDISTLDSGVLALTQTSLRHQIRRGLPKFTFKSNNMKEMVSMLQ-LSPHRLVMAGLQDELIDFDLRTLKETRIEHVGAGG-CTVLRKNSRYLFAGD-QLGTVTLRDLNSLSVQHTIKTHTNILSDFSVQGNLLISCGYSGRQNNLAIDRFLMVYDLRMLRLIAPIQVMIDPQMLKFLPSLTSQLAVVSSYGQVQLVDTVELSEPRVSMYQINT--NGSQCLSFDISSSSQAMAFGDQSGHINMIAAVQTPQPQFNLYSRSTEFADVVPQLPMVSITDTNFPLSSVMLPHLTTG-TQWFSD-WPEELLRYRYHRPKTIDPEVLSNMKMQGPIGYSPNPRTARRNQIPYV---IEQGGVCSPNGNGTAAATKAENGVKIIPRRYRKVELKYTKLGTQDFDFDQHNQTCFAGLEATLPNSYCNAMLQILYFTDALRVKLLEHSCIKEFCLSCELGFLFNMLDKSTASSPCQASNFLRSFRTVPEASALGLILTDRSS--NVNLISLIQNWNRFILHQMHYEIFDSSKNASTYSGSVQTSTNAENAGSSETSGSSDLYDSISDENSKEDDRERSKINAETDI-SKIFGTKQICINRCIKCQEEKIKESILLACNLSYPNHIKDSDQYFNFGTILKRSLSSEKSIQAFCERCKKFSPTNQSVKVTSLPQILSINCGLNNEKDITFLKRQLNRCSEKTTVDAAASLS---------TSKPCRYGANCSRSDCHFMHPDRKSPSHTSQPNAVNNSPNGRQKSWFPLTFTMGINDQGEVQVQTQSDASSGKSEQEEETEKPPTKGLDNNRMYALHAVVCQVDDGTQK--NLVSLINVQRPYHTMKLAESADDPQSQWYIFNDFSISPVSPQESVWFTLDWKVPCILFYRHVEDDSESASTTSSTVTESEETIPSESSSGSPTNLSNPFLEEIV---SPMLGNLSADATLQPLQSDEMPQSGDLVAMDAEFVTLNPEENEIRPDGKTATIKPCHMSVARISCIRGQGPAEGVPFMDDYISTQEKVVDYLTQFSGIKPGDLDANFSKKRLTALKYSYQKLKYLVDVGVIFVGHGLKNDFRVINIYVPSEQIIDTVHLFHMPHHRMVSLRFLAWHFLGTKIQSETHDSIEDARTTLQLYKHYLKLQEEKKFANALKNLYERGKQLQWKVPED 1241
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. SwissProt
Match: gi|296439280|sp|Q504Q3.3|PAN2_HUMAN (RecName: Full=PAN2-PAN3 deadenylation complex catalytic subunit PAN2; AltName: Full=Inactive ubiquitin carboxyl-terminal hydrolase 52; AltName: Full=PAB1P-dependent poly(A)-specific ribonuclease; AltName: Full=Poly(A)-nuclease deadenylation complex subunit 2; Short=PAN deadenylation complex subunit 2) HSP 1 Score: 848.195 bits (2190), Expect = 0.000e+0 Identity = 501/1215 (41.23%), Postives = 698/1215 (57.45%), Query Frame = 0 Query: 24 LESEDYEDQSYMPSSEFNLLNSVVGDGITKEKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFKVHDLD-PGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQSVRQGMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDTADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSSVEEPILNPYARDTEFADN--PTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRYANVFAKDIKECDPKHGAFDN---------HSPGIQSIPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHTCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQ-HSMWACNVPRLIQSWNRFILHQISNQLNVYELGLPSATRRRYRNSSSGSSGSRSSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPDGK------PNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAEDIGDKLRRIGVSWIPEEIELNLLENG--DVKSSAEKTESKVVETRK--------YHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIASPV-SQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLLSRGRKG-IAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEE----LNNLYDRGKVLNWKVPEDDA 1203 LE+ ++ ++ ++ L+SVV E V V+ FD HEE+LW+G+ GH TS++GP L++Y+SFQV+ ++++R + +L+ I LT+++L+ R G+ +F + DMHSLL + +L+GG+Q +I+ D N+ +E + + ++ PG + I+R NRF CG S GKV LRD + KV H DA +G L+DFDV+GN L CG S R DRFL +YDLR++RAI+PLQV + P LRF+P S++AI+S GQ Q + + P+ ++F V P+ G ++ D+S S Q LAFGD+ +HL++ EP NPY+R+TEFA + P + +L S IP +P T LSD WP + P R PP+D EILR+MK VG IGYA N RNQ+ Y +KE D + +F P + + YRK+ IK +K+ ++FDF +N+T F GLE +PN+YCN M+Q LY+ E R L NH C++E C+ CEL FLFHM+D+S G PCQ +NFLRA RTIPEASAL L+ +D + N+ RLIQ WNRFIL Q+ + EL +P A R G+ GS S G V Q++ + ++C +C + + LL L YPDG N F +V+ S+C Q T AWCD C+KYQPT Q+R ++ LP L +N +++ ++ FW Q + K A++ +K + L+ W P ++L+ + W+P I + + +N DV + + E + R Y L++ ILD T + +VA I VG+ YH R QWY FND I I EA +++WK+P IL Y L + KNPI V SL + RK F PL +EMP++GDLV +DAEFVTLN+EE+ELRSDG +TIK + MSVARITCVRG G EG+PFIDDYISTQE+VVDY+T+YSGI PGDLD + SSK+LTTLKS Y KLR+L+D G F+GHGL+ DF+VINL+VP +QV+DTV L+H+P RMISL+FLAWYFL KIQG+THDSIEDA TAL LY+KY++L + E L LY++G+ ++WKVPE + Sbjct: 46 LEALPVQESVHIMEGVYSELHSVVA-----EVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIRQIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSLLLTDSS-TLLVGGLQNHIIEIDLNTVQETQKYAVETPGVT--IMRQTNRFFFCGHTS-GKVSLRDLRTFKVEHEFDAFSGSLSDFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRLAIISQSGQCQFCEPTGLANPA-DIFHVN-PV-GPLLMTFDVSASKQALAFGDSEGCVHLWTDSPEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIP---VPLTTDTLLSD-WPAANSAPAPRRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYR------LKESDSEFDSFSQVTESPVGREEEPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGNNFLRAFRTIPEASALGLILADSDEASGKGNLARLIQRWNRFILTQLHQDMQ--ELEIPQAYR--------GAGGSSFCSSGDS-----------------VIGQLFSCEMENCSLC-RCGSETVRASSTLLFTLSYPDGSKSDKTGKNYDFAQVLKRSICLDQNTQAWCDTCEKYQPTIQTRNIRHLPDILVINCEVNSSKEADFWRMQA-----------EVAFKMAVKKHGGEISKNKEFALAD-------WKELGSPEGVLVCPSIEELKNV---WLPFSIRMKMTKNKGLDVCNWTDGDEMQWGPARAEEEHGVYVYDLMATVVHILDSRTGGS--LVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPIDKHEAVQFDMNWKVPAILYY-VKRNLNSRYNLNIKNPIEASVLLAEASLARKQRKTHTTFIPLMLNEMPQIGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEG 1186
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. SwissProt
Match: gi|81872294|sp|Q6IE70.1|PAN2_RAT (RecName: Full=PAN2-PAN3 deadenylation complex catalytic subunit Pan2; AltName: Full=Inactive ubiquitin carboxyl-terminal hydrolase 52; AltName: Full=PAB1P-dependent poly(A)-specific ribonuclease; AltName: Full=Poly(A)-nuclease deadenylation complex subunit 2; Short=PAN deadenylation complex subunit 2) HSP 1 Score: 845.114 bits (2182), Expect = 0.000e+0 Identity = 503/1220 (41.23%), Postives = 706/1220 (57.87%), Query Frame = 0 Query: 24 LESEDYEDQSYMPSSEFNLLNSVVGDGITKEKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFKVHDLD-PGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQSVRQGMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDTADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSSVEEPILNPYARDTEFADN--PTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRYANVFAKDIKECDPKHGAFDNHSPGIQS-----------IPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHTCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQ-HSMWACNVPRLIQSWNRFILHQISNQLNVYELGLPSATRRRYRNSSSGSSGSRSSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPDGK--PNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAEDIGDKLRRIGVSWIPEEIELNLLENG--DVKSSAEKTESKVVETRK---------------YHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIASPV-SQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLLSRGRKG-IAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEE----LNNLYDRGKVLNWKVPEDDA 1203 LE+ ++ ++ ++ L+SVV E V V+ FD EE+LW+G+ GH TS++GP L++Y+SFQV+ ++++R + +L+ I LT+++L+ R G+ +F + DMHSLL +L+GG+Q +++ D N+ +E + + ++ PG + I+R NRF CG S GKV LRD S KV H DA +G L+DFDV+GN L CG S R DRFL +YDLR++RAI+PLQV + P LRF+P S++AI+S GQ Q + + P+ ++F V P+ G ++ D+S S Q LAFGD+ +HL++ EP NPY+R+TEFA + P++ +L S IP +P LSD WP + P R PP+D EILR+MK VG IGYA N RNQ+ Y +KE D + FDN S +S + YRK+ IK +K+ ++FDF +N+T F GLE +PN+YCN M+Q LY+ E R L NH C++E C+ CEL FLFHM+D+S G PCQ SNFLRA RTIPEASAL L+ +D + ++ RLIQ WNRFIL Q+ + EL +P A R G+ GS SS S + Q++ + ++C +C + + LL L YP+ K N F +V+ S+C +Q T AWCD+C+KYQPT Q+R ++ LP L +N +++ ++ FW Q + K A++ K + L+ +R + + PE E++ + W+P I + + +N DV + A++ E + T Y L++ ILD T + +VA I VG+ YH R QWY FND I I EA +++WK+P IL Y L + KNPI V SL + RK F PL +EMP++GDLV +DAEFVTLN+EE+ELRSDG +TIK + MSVARITCVRG G EG+PFIDDYISTQE+VVDY+T+YSGI PGDLD + SSK+LTTLKS Y KLR+L+D G F+GHGL+ DF+VINL+VP +QV+DTV L+H+P RMISL+FLAWYFL KIQG+THDSIEDA TAL LY+KY++L + E L LY++G+ ++WKVPE ++ Sbjct: 46 LEALPVQESVHIMEGVYSELHSVVA-----EVGVPVSVSHFDLQEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIRQIQSLENGILFLTKNNLKYMARGGLIIFDYLLDESEDMHSLLLAD-NNTLLVGGLQNHVLEIDLNTVQETQKYAVETPGVT--IMRQTNRFFFCGHTS-GKVSLRDLRSFKVEHEFDAFSGSLSDFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRLAIISQSGQCQFCEPTGLANPA-DIFHVN-PV-GPLLMTFDVSASKQALAFGDSEGCVHLWTDSPEPSFNPYSRETEFALPCLVDSLPALDWSQDLLPLSLIP---VPLTTDALLSD-WPAANSAPAPRRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYR------LKESDHE---FDNFSQVTESPTGREEEPLHTVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADSDEASGKGSLARLIQRWNRFILTQLHQDMQ--ELEVPQAYR--------GAGGSFCSSGDS------------------IIGQLFSCEMENCSLC-RCGSETVRASSTLLFTLSYPEDKTGKNYDFAQVLKRSICLEQNTQAWCDSCEKYQPTIQTRNIRHLPDILVINCEVNSSKEADFWRLQA-----------EVAFKIAVKKF-GGEVKSKEFALA-DRKELR--SPEGFLCCSSMEELKN-------VWLPFSIRMKMTKNKGLDVCNWADEHELSSLGTPSQWGPARAEEEHGVYVYDLMATVVHILDSRTGGS--LVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPIDKYEAVQFDMNWKVPAILYY-VKRNLNSRYNLNSKNPIEASVLLAEASLARKQRKTHTTFIPLMLNEMPQVGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTALQLYRKYLELSKNGAEPESFHKVLKGLYEKGRKMDWKVPEPES 1186
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. SwissProt
Match: gi|81873695|sp|Q8BGF7.1|PAN2_MOUSE (RecName: Full=PAN2-PAN3 deadenylation complex catalytic subunit Pan2; AltName: Full=Inactive ubiquitin carboxyl-terminal hydrolase 52; AltName: Full=PAB1P-dependent poly(A)-specific ribonuclease; AltName: Full=Poly(A)-nuclease deadenylation complex subunit 2; Short=PAN deadenylation complex subunit 2) HSP 1 Score: 844.343 bits (2180), Expect = 0.000e+0 Identity = 502/1208 (41.56%), Postives = 697/1208 (57.70%), Query Frame = 0 Query: 24 LESEDYEDQSYMPSSEFNLLNSVVGDGITKEKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFKVHDLD-PGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQSVRQGMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDTADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSSVEEPILNPYARDTEFADN--PTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRYANVFAKDIKECDPKHGAFDNHSPGIQS-----------IPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHTCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQ-HSMWACNVPRLIQSWNRFILHQISNQLNVYELGLPSATRRRYRNSSSGSSGSRSSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPDGK--PNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPD--CKFWHP---EQEPTAKKAEDIGDKLRRIGVSWIPEEIELNLLENGDVKSSAEKTESKVVETRKYHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIASPV-SQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLLSRGRKG-IAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEE----LNNLYDRGKVLNWKVPEDDA 1203 LE+ ++ ++ ++ L+SVV E V V+ FD HEE+LW+G+ GH TS++GP L++Y+SFQV+ +++R + +L+ I LT+++L+ R G+ +F + DMHS+L + +L+GG+Q +++ D N+ +E + + ++ PG + I+R NRF CG S GKV LRD S KV H DA +G L+DFDV+GN L CG S R DRFL +YDLR++RAI+PLQV + P LRF+P S++AI+S GQ Q + + P+ ++F V P+ G ++ D+S S Q LAFGD+ +HL++ EP NPY+R+TEFA + P + +L S IP +P LSD WP + P R PP+D EILR+MK VG IGYA N RNQ+ Y +KE D + FDN S +S + YRK+ IK +K+ ++FDF +N+T F GLE +PN+YCN M+Q LY+ E R L NH C++E C+ CEL FLFHM+D+S G PCQ SNFLRA RTIPEASAL L+ +D + ++ RLIQ WNRFIL Q+ + EL +P A R G+ GS SS S + Q++ + ++C +C + + LL L YP+ K N F +V+ S+C +Q T AWCD C+KYQPT Q+R ++ LP L +N +++ ++ FW Q + + +K ++ G C+ + W P + T K D+ +W +E EL+ L A E V Y L++ ILD T + +VA I VG+ YH R QWY FND I I EA +++WK+P IL Y L + KNPI V SL + RK F PL +EMP++GDLV +DAEFVTLN+EE+ELRSDG +TIK + MSVARITCVRG G EG+PFIDDYISTQE+VVDY+T+YSGI PGDLD + SSK+LTTLKS Y KLR+L+D G F+GHGL+ DF+VINL+VP +QV+DTV L+H+P RMISL+FLAWYFL KIQG+THDSIEDA TAL LY+KY++L + E L LY++G+ ++WKVPE ++ Sbjct: 46 LEALPVQESVHIMEGVYSELHSVVA-----EVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGGDDIRQIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSVLLTDNS-TLLVGGLQNHVLEIDLNTVQETQKYAVETPGVT--IMRQTNRFFFCGHTS-GKVSLRDLRSFKVEHEFDAFSGSLSDFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRLAIISQSGQCQFCEPTGLANPA-DIFHVN-PV-GPLLMTFDVSASKQALAFGDSEGCVHLWTDSPEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIP---VPLTTDALLSD-WPAANSAPAPRRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYR------LKESDHE---FDNFSQVTESPTGREEEPLHTVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADSDEASGKGSLARLIQRWNRFILTQLHQDMQ--ELEVPQAYR--------GAGGSFCSSGDS------------------IIGQLFSCEMENCSLC-RCGSETVRASSTLLFTLSYPEDKTGKNYDFAQVLKRSICLEQNTQAWCDNCEKYQPTIQTRNIRHLPDILVINCEVNSSKEADFWRLQAEVAFKIAVKKYGGEMKSKEFALADRKELRSPEGFLCSSIEELKNVWLPFSIRMKMTKNKGLDV--------CNW-ADEHELSSLGAPSQWGPARAEEELGVYV--YDLMATVVHILDSRTGGS--LVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPIDKYEAVQFDMNWKVPAILYY-VKRNLNSRYNLNIKNPIEASVLLAEASLARKQRKTHTTFIPLMLNEMPQVGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPES 1185
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. SwissProt
Match: gi|82231230|sp|Q5F450.1|PAN2_CHICK (RecName: Full=PAN2-PAN3 deadenylation complex catalytic subunit PAN2; AltName: Full=Inactive ubiquitin carboxyl-terminal hydrolase 52; AltName: Full=PAB1P-dependent poly(A)-specific ribonuclease; AltName: Full=Poly(A)-nuclease deadenylation complex subunit 2; Short=PAN deadenylation complex subunit 2) HSP 1 Score: 840.106 bits (2169), Expect = 0.000e+0 Identity = 495/1179 (41.98%), Postives = 682/1179 (57.85%), Query Frame = 0 Query: 54 EKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFKVHDLD-PGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQSVRQGMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDTADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSSVEEPILNPYARDTEFADNPT--NHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRYANVFAKDIKECDPKHGAFDN---------HSPGIQSIPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHTCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQ-HSMWACNVPRLIQSWNRFILHQISNQLNVYELGLPSATRRRYRNSSSGSSGSRSSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPDG--KP--NVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAEDIGDKLRRIGVSWIPEEIELNLLENG--DVKSSAEKTESKVVETRK----YHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIASPV-SQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLLSRGRKGIA-FTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEE----LNNLYDRGKVLNWKVPEDDA 1203 E V V+ FD HEE+LW+G GH TS++GP L++Y+SFQV+ ++++R + +L+ + LT+++L+ R G+ +F + DMHSLL + +L+GG+Q +I+ D N+ +E + + ++ PG + I+R NRF CG S GKV LRD + V H DA++G L+DFDV+GN L+TCG S R DRFL +YDLR++RA +PLQV I P+ LRF+P S++AI+S GQ Q + + P+ ++F V G ++ D+S S Q LAFGD+ +HL++ E N Y+R+T+FA P + +L S IP +P T LSD WP + P R PP+DPEILR+MK VG IGYA N RNQ+ Y +KE D + +F P + + YRK+ IK +K+ ++FDF +N+T F GLE +PN+YCN M+Q LY+ E R L NH C++E C+ CEL LFHM+D+S G PCQ SNFLRA RTIPEASAL L+ +D + N+ RLIQSWNRFIL Q+ + E P A R G+ SS+FGS V Q++ + +MC +C + LL L YP+ KP + F +++ S+C +Q T AWC+ C+KYQPT Q+R ++ LP L +N +++ ++ FW TQ + +++ G + D W P + ++L+ I WIP I++ L +N DV + +E E + + Y L++ ILD T + +V I VG+ YH R QWY FND I + EA ++SWK+P IL Y L + KNPI V SL + RK A F PL EMP+ GDLV +DAEFVTLN+EE+ELRSDG +TIK + MSVARITCVRG G EGVPFIDDYISTQE+VVDY+T+YSGI PGDLD + SSK+LTTLKS Y KLR+L+D G F+GHGL+ DF+VINL+VP +QVIDTV L+H+P RMISL+FLAWYFL KIQG+THDSIEDA TAL LY+KY++L ++ L LY++G+ L+WKVPE D+ Sbjct: 71 EVGVPVSVSHFDLHEEMLWVGNHGGHATSFFGPTLERYSSFQVNSSDDIRQIQSLESGVLFLTKTNLKCMSRGGLIIFDYLMDEAEDMHSLLLTDSS-TLLVGGLQNHVIEIDLNTVQETQKYTVEVPGIT--IMRQSNRFFFCGHTS-GKVSLRDLRTFVVEHEFDAYSGSLSDFDVHGNLLVTCGFSSRMNGLACDRFLKVYDLRMMRATTPLQVHIDPFFLRFIPTYTSRLAIISQTGQCQFCEPTGLANPA-DIFHVNT--VGPLIMTFDVSASKQALAFGDSEGCVHLWADSPEVTFNTYSRETDFALPCIVDTLPHLDWNQDLVPLSLIP---VPLTSETLLSD-WPAANSAPAPRRAPPVDPEILRTMKKVGFIGYAPNPRTKLRNQIPYR------LKEADNEFDSFSQVPESPIGREEEPHLYMVAKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLVQNHLCQKEFCLGCELGLLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADSDEATGKVNLGRLIQSWNRFILTQLHQETQEQE--GPQAYR-----------GAGSSTFGSSGD--------------SVIGQLFSCEVENCSMC-RCGKETVRVSSTLLFTLSYPESAEKPVKDYEFAQILKRSICLEQNTQAWCENCEKYQPTVQTRNIRCLPDVLVINCEVNSSKEADFWKTQAEYAFQ--------------RALMKRGGFEITKGKEISLGD---WKELGNPEVGHSYPSVEELKNI---WIPHAIKMRLTKNKELDVCNWSESDELSPNDDPESVYVYDLMATVVHILDSRTGGS--LVGHIKVGETYHQRKEGVTHQQWYLFNDFLIEPVDKCEAVQFDMSWKVPAILYY-ARRNLNSKYNLVIKNPIEASVLLAEASLARKQRKCHATFIPLMLSEMPQAGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGVPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDVGVKFVGHGLQKDFRVINLMVPKDQVIDTVYLFHIPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTALQLYRKYLELSQGGSEPDDFRKVLKALYEKGRKLDWKVPEPDS 1181
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. SwissProt
Match: gi|121930455|sp|Q0UPL5.1|PAN2_PHANO (RecName: Full=PAN2-PAN3 deadenylation complex catalytic subunit PAN2; AltName: Full=PAB1P-dependent poly(A)-specific ribonuclease; AltName: Full=Poly(A)-nuclease deadenylation complex subunit 2; Short=PAN deadenylation complex subunit 2) HSP 1 Score: 477.248 bits (1227), Expect = 1.135e-147 Identity = 348/1186 (29.34%), Postives = 546/1186 (46.04%), Query Frame = 0 Query: 57 VGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEE--VRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSL-LHNQRTGRILMGGIQEKLIDFDTNSAKEFKVHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQSVRQGMA-QPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDTADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSSVEEPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRYA------------------------NVFAKDIKECDPKHGAFDNHSPGI--QSIPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHT---CERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQHSMWACNVP--RLIQSWNRFILHQISNQLNVYELGLPSATRRRYRNSSSGSSGSRSSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPDGK-------PNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAEDIGDKLRRIGVSWIPEEIELNLLENGDVKSSAEKTESKVVETRKYHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIASPVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLLSRGRKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLP-HHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVP 1199 V ++ FDT +ELLW G G VTS YGP L++YTS++ H T + V+ + D+ + +++ S+ RRG+ + +S + D+ + ++ T IL+ G QE++ D K V L A I++ +++C + G IL D SL V + H G ++D D G+ L TCG S RQ A D F ++ L+ L+ ++P+ +R P M + I S GQ+Q++D + + +L + L +++PS + A D+ +++HL+ S + Y+ TEFAD+ SM + + ++I PY + T LS WP P P ID IL +M +A+N +RNQ+ ++ + K + D H + + +P Y + IK +K D+FDF +N+T F GLE + NSY N++LQ +T R L L HT C E+C++CEL FL M++ + GL CQ+SNFL+ + A +L+L+ +A NV +IQ+ NRF+L +IS + + LPS H + Q+ S C +C + L+YP P F +++ +S+ + T WC C +YQ Q + ++S+P L LNA + + W+ PN W P + IG+ I ++ + E D+K ++ V + Y L+ + I + +Q ++VA IN G +R +W+ FND + I EEA SWKLP +L +Q + + +N T ++R S + ++ E P+ G VAIDAEF+ L EE E+++DG TI+ +AR++ RG G+ G+PFIDDYI+ E+VVDY+T++SGI PGDL+ ++S +LK AYKKL L++ GC+F+GH L NDF+ IN+ VP QV+DT L+ LP R ++LKFLAW L ++IQ DTHDSIEDA TAL L++KY + + L LN++Y G + +K P Sbjct: 23 VPISTFAFDTTQELLWTGNNQGRVTSLYGPSLERYTSYRGHATSDGPVKQFLFTDKGVLSISRQSVHYSHRRGLTQWHLTSPDFKDLKCMNFTSKGTREILIAGCQEQMFKVDVE--KGIVVDTLPVDAQYTIMKRAGQYLCAATKTGGIHIL-DSNSLSVIKVFEGHTGSISDMDAKGDFLATCGWSPRQQYAYMLDPFTNVFSLKTLKQLAPVPFHTGAAFVRMHPRMSTTAIIASQNGQMQVIDLMNPDSANLR----QLNLYDSYLAGFEMAPSGEAFALADSNSNVHLWGSPAKVHFPEYSNPTEFADHVIPPASMDWSLDTPL-NTIGMPYY---KETLLSG-WPSHMVFEVGAPPPKIDGAILSNMTRTDMGFFAKNPRTKRRNQIEVTRQTDRSSDSLTPPKFLSEKSRASLSLSEANAKAVETMETLTDLHLDDVTRKDVPAMYGNVEIKYSKFGVDDFDFAYYNQTPFSGLETHITNSYANSLLQLFRFTPLIRNLALQHTASPCLFESCLLCELGFLIDMLEKAAGLNCQASNFLKTFSGLSNAVSLNLL-----EEFAPNVALTSMIQNLNRFLLDKISEE---FRQMLPS------------------------------------HGGTSLMDQVLETQARASMRCAQCANETIRGGKNFVNELVYPAKHVMKNTRIPRPTFSQILKASVERQDQTRGWCTKCNRYQQMVQRKTIQSVPGVLMLNAAIQTHEAKLLWSI--------------------------PN-----------------WLPHE----------------IGI--IVDQGQFYCFEGQDLKLHLQR---GVFDIMVYELVGVVADI-NSGEHQKPHLVATINTGP--SSREPDAEDKWHLFNDFLVRPIPREEALRFEPSWKLPSVLTFQTKSARNKIDDSWKENLDTSILYRWWSSNPTPPDDKFKLLQVS-TEAPRPGYPVAIDAEFIRLQAEEIEMKADGTRQTIRPDRKGLARVSVCRGEGEHAGLPFIDDYIAVTEQVVDYLTEWSGISPGDLNRETSPHAPVSLKHAYKKLWLLLNLGCVFVGHSLANDFRTINIHVPRSQVVDTSNLFFLPDFKRKLNLKFLAWCVLKEQIQQDTHDSIEDATTALKLWRKYEEFVDAGVLEPMLNDIYATGSQVKFKAP 1084
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. SwissProt
Match: gi|158512626|sp|A1CEK7.1|PAN2_ASPCL (RecName: Full=PAN2-PAN3 deadenylation complex catalytic subunit pan2; AltName: Full=PAB1P-dependent poly(A)-specific ribonuclease; AltName: Full=Poly(A)-nuclease deadenylation complex subunit 2; Short=PAN deadenylation complex subunit 2) HSP 1 Score: 449.899 bits (1156), Expect = 3.343e-137 Identity = 340/1184 (28.72%), Postives = 544/1184 (45.95%), Query Frame = 0 Query: 62 ITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEE--VRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFKVHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQSVRQ-GMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDTADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSSVEEPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRYANVF-AKDIKECDPK--------------HGAFDNHSPGIQSIPMT----------YRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNH---TCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQHSMWACNVPRLIQSWNRFILHQISNQLNVYELGLPSATRRRYRNSSSGSSGSRSSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYP--DGK-----PNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAEDIGDKLRRIGVSWIPEEIELNLLENGDVKSSAEKTESKVVETRKYHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIASPVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPI-TEKVFRTPRSLLSRGRKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLP-HHRMISLKFLAWYFLSKKIQGDT------HDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVP 1199 I FD ELLW G + G +TS+YGP+LQ+YTS + HP + VR ++ ++ + L+ S+ RRG+ + + + M D+H + + RI++ G Q + D + K V L + +++ +R++C + G V + +V + AH + D D + L+TCG SVR G D +YDL+ L + P+ +R P + + + S GQ+Q+VD + +L V+ L +DISPS + LA D +IHL+ S + N +++ EFAD PS+ + + + I PY L WP P ID ++ ++ YA N +R QV + PK G+ + + + + Y + IK ++ D+FDF +N+T F GLE + NS+ NA+LQ L + R L L+H TC E C++CE+ +LF M++ + G CQ++N L+A + EAS L L+ + ++ ++ IQS NRF L+QI++ + + LPS+ +R ++ S R C C+ I L LIYP D K P F ++ +S+ + WC+ C++YQ + V +P L LNA ++NP W S+P W PE+ IG+ + E ++ E ++K+ + ++KV Y L+ + I P +AH +V+ INV +R S+W+ FND ++ + +EA N WK+PC+L YQ + + A+K+ + T +FR L+ GR + L +E P G VA+D EFV L + E ++++DG ++ +AR++ +RGSG EGVPFIDDYI+ +E +VDYVT+YSGI PGDLD ++S L LK AYKKL L++ GCIF+GHGL +DF+ IN+ VP Q +DT LY P +R +SL++LAW + IQ ++ HDS+EDA AL L+KK+ + + + + + L ++ G L ++ P Sbjct: 28 IAFDDVSELLWAGNEFGRITSFYGPELQRYTSVRAHPVSDGPVRQILFHERGVISLSPKSVHMITRRGLSQWHIAHEEMTDLHCMSFTAQLNRIIVAGCQSAMFTIDID--KGVIVDKLQTDHNYTMMKK-SRYLCAATDT-GSVNALSLSDFQVVKSWKAHGTAINDMDARNDLLVTCGFSVRHLGSPIVDPLANVYDLKTLSPLPPIPFHAGAAYVRMHPKLHTTSFVASQTGQLQVVDLMNPNAINLRQANVSFML------GIDISPSGEALAINDAECAIHLWGSPSKVHFNEMSKEVEFADVVPRPPSLDWSPDTPL-NMIGMPYYHER----LFSAWPSHLVFEVGNPPASIDQSLIPYLRPAEMGHYAPNPKKTRRYQVENTRALTTAESALIAPKFLSEKAREQTRAKSEGSVSDTAEALAGAKLNGEAEDDPLLKYSNVEIKYSRFGVDDFDFRFYNQTIFSGLETHIANSFTNALLQLLKFIPLVRNLALHHAASTCIYETCLLCEMGYLFDMLEKANGQNCQATNLLKAFSSYREASNLGLL---EENLTTKSLSSAIQSVNRFFLNQIAHD---FRMILPSSDDLDHRLATIASESIR---------------------------------------CMFCQNEIVRPGNSLANELIYPAIDIKQARRNPAFKFSNILRASIERETQNRGWCNYCRRYQQVTIRKTVHRMPLVLILNAALNNPLCRRLW------------------------SIPG-------------------WLPEE----------------IGI--VVEGGQVMCYEGDELKA---QVQNKVPNLVLYDLVGLVAEIDIPEHQKAH-LVSFINVS--ISSRETESKSRWHLFNDFLVTEVDKDEALRFNQPWKIPCVLAYQARDARHGVDD-AWKDTLDTTLLFRDWS--LNGGRPVESRQTLTEEEKPTPGTPVALDTEFVDLEKAEIDVKADGSQEIVRPNKSGLARVSVLRGSGIHEGVPFIDDYITIKEPIVDYVTQYSGIKPGDLDPRTSQHNLVPLKVAYKKLWLLLNLGCIFVGHGLASDFRKINIQVPKNQTVDTQYLYFHPGKNRRLSLRYLAWAVFKEYIQEESTDANQGHDSVEDARMALRLWKKFQEYEDAGIVNQILEEIFREGSRLGFRPP 1081
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. SwissProt
Match: gi|158512651|sp|A1DFN6.1|PAN2_NEOFI (RecName: Full=PAN2-PAN3 deadenylation complex catalytic subunit pan2; AltName: Full=PAB1P-dependent poly(A)-specific ribonuclease; AltName: Full=Poly(A)-nuclease deadenylation complex subunit 2; Short=PAN deadenylation complex subunit 2) HSP 1 Score: 437.187 bits (1123), Expect = 1.967e-132 Identity = 336/1192 (28.19%), Postives = 530/1192 (44.46%), Query Frame = 0 Query: 58 GVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEE--VRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFKVHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQSVRQ-GMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDTADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSSVEEPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQV-----------------------RYANVFAKDIKECDPKH---GAFDNHSPGIQSIPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNH---TCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQHSMWACNVPRLIQSWNRFILHQISNQLNVYELGLPSATRRRYRNSSSGSSGSRSSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYP--DGK-----PNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAEDI----GDKLRRIGVSWIPEEIELNLLENGDVKSSAEKTESKVVETRKYHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIASPVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLLSRGRKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLP-HHRMISLKFLAWYFLSKKIQGD------THDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVP 1199 I FD ELLW G + G +TS+YGP+LQ+YTS + HP + VR ++ ++ + L+ S+ RRG+ + S + M D++ + + +I++ G Q + D + K V L + +++ +R++C + G V +V + +H + D D + L+TCG SVR G D +YDL+ L + P+ +R P + + + S GQ+Q+VD + +L V+ + +DISPS + LA D SIHL+ S + N +++ EFAD P + + + + I PY L WP P PID ++ ++ YA N +R QV R N F + D GA N + + Y + IK ++ D+FDF +N+T F GLE + NS+ NA+LQ L + R L L+H TC E C++CE+ +LF M++ + G CQ++N LR + EAS L L + ++ ++ IQS NRF L+QI++ + + +PS+ D Q + +S C C+ I L LIYP D K P F ++ +S+ + WC+ C++YQ + + +P L LNA + NP W S+P W PE+ A + GD+L+ + +P + L+ G V +E + E +K HL+S + +A N +W+ FND ++ + +EA N WK PCIL YQ + + ++KN + + S L+ GR L +E P G VA+D EFV L + E ++++DG ++ + +AR++ +RGSG EGVPFIDDYI+ +E +VDYVT+YSGI PGDLD ++S L LK AYKKL L++ GC+F+GHGL +DF+ IN+ VP Q +DT LY P +R +SL++LAW + IQ + HDSIEDA AL L+KK+ + + + + + L ++ G L ++ P Sbjct: 24 AATTIAFDDVSELLWAGNEFGRITSFYGPELQRYTSVRAHPVSDGPVRQILFHERGVISLSPKSVHMITRRGLTQWHISHEEMTDLYCMSLTAQLNKIIVAGCQRAMFTIDID--KGIIVDKLHTDHNYTLMKK-SRYLCAATDT-GSVNALSLTDFRVVKSWKSHGTAINDMDARNDLLVTCGFSVRHLGSPIVDPLANVYDLKTLSPLPPIPFHAGAAYVRMHPKLSTTSFVASQTGQLQVVDLMNPNAINLRQANVSF------MLGIDISPSGEALAINDAECSIHLWGSPSKIHFNEMSKEVEFADVVPRPPPLDWSPDTPL-NMIGMPYY----RERLLSAWPSHLVFEVGSPPAPIDQSLIPYLRPAEMGHYAPNPKKTRRYQVENTRALTTAEPALIAPKFLSEKAREQNKFKSEASVSDTAEALAGAKLNGEAEDDPL-LKYSNVEIKYSRFGVDDFDFRFYNQTTFSGLETHIANSFTNALLQLLKFIPLVRNLALHHAASTCIYETCLLCEMGYLFDMLEKANGQNCQATNLLRTFSSYREASNLGLF---EENLTTKSLSSAIQSVNRFFLNQIAHD---FRMIVPSS---------------------------------------DDLDQRLSTIASESIRCMFCQNEIVRPGNSLANELIYPAIDIKQARRNPAFRFSNILRASIERETQNRGWCNYCRRYQQVTIRKSIHRMPLVLILNAALSNPICRRLW------------------------SIPG-------------------WLPEEVGIAVDNGQVMCFEGDELKTQLQNKLPNLVVYELV--GLV------SEIDIPEHQKPHLVSFINVSISSRELEAKN--------------------RWHLFNDFLVTEVDKDEALRFNQPWKSPCILAYQAKDARHAVDD-SWKNVLDITLLFRDWS-LNGGRAVETRQTLTEEEKPTPGTPVALDTEFVDLEKAEIDVKADGSQEIVRPSKSGLARVSVLRGSGVHEGVPFIDDYITIKEPIVDYVTQYSGIKPGDLDPRTSQHNLVPLKVAYKKLWLLLNLGCVFVGHGLASDFRKINIQVPKSQTVDTQYLYFHPGKNRRLSLRYLAWAVFKEYIQEEPADNNQGHDSIEDARMALRLWKKFQEYEDAGIVNQILEEIFREGSKLGFRPP 1081
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. SwissProt
Match: gi|158512846|sp|A2QW83.1|PAN2_ASPNC (RecName: Full=PAN2-PAN3 deadenylation complex catalytic subunit pan2; AltName: Full=PAB1P-dependent poly(A)-specific ribonuclease; AltName: Full=Poly(A)-nuclease deadenylation complex subunit 2; Short=PAN deadenylation complex subunit 2) HSP 1 Score: 429.098 bits (1102), Expect = 1.500e-129 Identity = 329/1183 (27.81%), Postives = 531/1183 (44.89%), Query Frame = 0 Query: 61 AITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHP-TEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFKVHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQSVRQ-GMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDTADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSSVEEPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRYANVFAK-DIKECDPK--------------HGAFDNHSPGIQSIP----------MTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNH---TCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQHSMWACNVPRLIQSWNRFILHQISNQLNVYELGLPSATRRRYRNSSSGSSGSRSSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYP--DGK-----PNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAEDIGDKLRRIGVSWIPEEIELNLLENGDVKSSAEKTESKVVETRKYHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIASPVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLLSRGRKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDT-VLLYHLPHHRMISLKFLAWYFLSKKIQGD------THDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVP 1199 AI FD ELLW G +TS++GP+LQ+YTS + HP TE VR ++ D+ + L+ S+ RRG+ + + + M D+ + +T RI++ G Q+ + F + K + L + I++ +R++C + G V V + AH + D D + L+TCG SVR G D +YDL+ L + P+ +R P + + + S GQ+Q+VD + +L V+ + +D+SPS + LA D +IHL+ S + N +++ EF D P++ E + S I PY L WP P P +D ++ ++ +A N +R QV A + PK GA + + + + Y + IK ++ D+FDF +N+T F GLE + NS+ NA+LQ + R + L+H +C E C++CE+ +LF M++ + G CQ++N L+ + EAS L L + ++ ++ IQ+ NRF L QIS+ + PS+ +R ++ S R C C+ I L+ L YP D K P F ++ +S+ + WC+ C++YQ + V +P L LNA + NP W ++P W PE+ +G+ + E ++ E D+K + ++K+ Y L+ + I P +AH +V+ INV +R ++W+ FND ++ + EEA N WK+PC+L YQ + + T +FR L+ GR + L+ +E P G VA+D EFV L + E ++++DG ++ + +AR++ +RGSG EGVPFIDDYI+ +E +VDYVT+YSGI PGDLD + S L LK AYKKL L++ GC+F+GHGL +DF+ +N+ VP Q +DT L +H +R +SL++LAW + IQ + HDSIEDA AL L+KK+ + + + + + L ++ G L ++ P Sbjct: 27 AIAFDDVMELLW-----GRITSFFGPELQRYTSVRAHPATEPVRQIIFHDRGVISLSPKSVHMITRRGLTQWHIAHEEMTDLRCMSFTAQTNRIIVAGCQKSM--FTIDIDKGIIIDKLHTEYNYTIMKK-SRYLCAATDT-GSVNALSLNDFSVVKSWKAHGTAVNDMDARNDLLVTCGFSVRHLGSPIVDPLANVYDLKTLSPLPPIPFHAGAAYVRMHPKLHTTSFVASQTGQLQVVDLMNPNAINLRQANVSF------MLGIDLSPSGEALAINDAECAIHLWGSPAKVHFNEMSKEAEFGDVAPRPPTLDWSPETPL-SMIGMPYYHER----LFSAWPSHLVFEVGSPPPQVDQALIPYLRPAELGHHAPNPKKTRRYQVENTRALASAEPALIAPKFLSEKAREQNKAKSEGAISDAAEALAGAKINGETDDDPLLKYSNVEIKYSRFGVDDFDFRFYNQTTFSGLETHIANSFTNALLQLFKFIPYIRNVALHHAASSCIFETCLLCEMGYLFDMLEKASGQNCQATNLLKTFSSYREASNLGLF---EENLTNKSLSAAIQAVNRFFLGQISHDFRMIS---PSSDDLDHRLATVASESIR---------------------------------------CMFCQNEIVRPGNSLVNELNYPAIDIKQARRNPAFRFSNILRASIEREAQNRGWCNYCRRYQQVAIRKSVHRMPQVLMLNAALTNPICRRLW------------------------AIPG-------------------WLPEE----------------VGI--VIEGGQILCFEGEDLKL---RVQAKMPGLVVYDLVGLVCEIDIPEHQKAH-LVSFINVS--ISSREPETKNKWHLFNDFLVTEVDKEEALRFNQPWKIPCVLAYQVQDGRHAMDDTWKDALDTTLLFRDWS--LNGGRPVESRVTLSEEEKPTPGTPVALDTEFVDLEKAEIDVKADGSQEIVRPSKSGLARVSVLRGSGIREGVPFIDDYITIKENIVDYVTQYSGIKPGDLDPRVSQHNLVPLKVAYKKLWLLLNLGCVFVGHGLASDFRKVNIQVPKSQTVDTQYLFFHPGKNRRLSLRYLAWAVFKEYIQEEPADDSQGHDSIEDARMALRLWKKFKEYEDAGIVSQILEEIFREGSKLGFRPP 1075
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. SwissProt
Match: gi|74669051|sp|Q4WHP6.1|PAN2_ASPFU (RecName: Full=PAN2-PAN3 deadenylation complex catalytic subunit pan2; AltName: Full=PAB1P-dependent poly(A)-specific ribonuclease; AltName: Full=Poly(A)-nuclease deadenylation complex subunit 2; Short=PAN deadenylation complex subunit 2) HSP 1 Score: 424.091 bits (1089), Expect = 9.416e-128 Identity = 330/1188 (27.78%), Postives = 528/1188 (44.44%), Query Frame = 0 Query: 62 ITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEE--VRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFKVHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQSVRQ-GMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDTADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSSVEEPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRY---------ANVFAKDIKECDPKHGAFDNHSPGIQSIP----------------MTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNH---TCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQHSMWACNVPRLIQSWNRFILHQISNQLNVYELGLPSATRRRYRNSSSGSSGSRSSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPD-------GKPNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAEDI----GDKLRRIGVSWIPEEIELNLLENGDVKSSAEKTESKVVETRKYHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIASPVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPI-TEKVFRTPRSLLSRGRKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLP-HHRMISLKFLAWYFLSKKIQGD------THDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVP 1199 I FD ELLW G + G +TS+YGP+LQ+YTS + HP + VR ++ ++ + L+ S+ RRG+ + S + M D++ + + +I++ G Q + D + K V L + +++ +R++C + G V +V + +H + D D + L+TCG SVR G D +YDL+ L + P+ +R P + + + S GQ+Q+VD + +L V+ + +DISPS + LA D SIHL+ S + N +++ EFAD P + + + + I PY L WP P PID ++ ++ YA N +R QV A + K + E + F + + + + Y + IK ++ D+FDF F GLE + NS+ NA+LQ L + R L L+H TC E C++CE+ +LF M++ + G CQ++N L+ + EAS L L+ + ++ ++ IQS NRF L+QI++ + + +PS+ +R S+ S R C C+ I L LIYP P F ++ +S+ + WC+ C++YQ + + +P L LNA + N W S+P W PE+ A + GD+L+ + +P + L+ G V +E + E +K HL+S + +A N +W+ FND ++ + +EA N WK PCIL YQ + + ++KN + T +FR L+ GR L +E P G VA+D EFV L + E ++++DG ++ + +AR++ +RGSG EGVPFIDDYI+ +E +VDYVT+YSGI PGDLD ++S L LK AYKKL L++ GC+F+GHGL +DF+ IN+ VP Q +DT LY P +R +SL++LAW + IQ + HDSIEDA AL L+KK+ + + + + + L ++ G L ++ P Sbjct: 28 IAFDDVSELLWAGNEFGRITSFYGPELQRYTSVRAHPVSDGPVRQILFHERGVISLSPKSVHMITRRGLTQWHISHEEMTDLYCMSFTAQLNKIIVAGCQRAMFTIDID--KGIIVDKLHTDHNYTMMKK-SRYLCAATDT-GSVNALSLTDFRVVKSWKSHGTAINDMDARNDLLVTCGFSVRHLGSPIVDPLANVYDLKTLSPLPPIPFHAGAAYVRMHPKLSTTSFVASQTGQLQVVDLMNPNAINLRQANVSF------MLGIDISPSGEALAINDAECSIHLWGSPSKIHFNEMSKEVEFADVVPRPPPLDWSPDTPL-NMIGMPYY----RERLLSAWPSHLVFEVGSPPAPIDQSLIPYLRPAEMGHYAPNPKKTRRYQVENTRALTTAEPALIAPKFLSEKAREQSKFKSEASVSDTAEALAGAKLNGEAEDDPLLKYSNVEIKYSRFGVDDFDF------SFSGLETHIANSFTNALLQLLKFIPLVRNLALHHAASTCIYETCLLCEMGYLFDMLEKANGQNCQATNLLKTFSSYREASNLGLL---EENLTTKSLSSAIQSVNRFFLNQIAHD---FRMIVPSSDDLDHRLSTIASESIR---------------------------------------CMFCQNEIVRPGNSLANELIYPTIDIKQARRNPAFRFSSILRASIERETQNRGWCNYCRRYQQVTIRKSIHRMPLVLILNAALSNAICRRLW------------------------SIPG-------------------WLPEEVGIAVDNGQVMCFEGDELKTQLQNKLPNLVVYELV--GLV------SEIDIPEHQKPHLVSFINVSISSREPEAKN--------------------RWHLFNDFLVTEVDKDEALRFNQPWKSPCILAYQVKDARHAVDD-SWKNVLDTTLLFRDWS--LNGGRAVETRQTLTEEEKPTPGTPVALDTEFVDLEKAEIDVKADGSQEIVRPSKSGLARVSVLRGSGVHEGVPFIDDYITIKEPIVDYVTQYSGIKPGDLDPRTSQHNLVPLKVAYKKLWLLLNLGCVFVGHGLASDFRKINIQVPKSQTVDTQYLYFHPGKNRRLSLRYLAWAVFKEYIQEEPADNNQGHDSIEDARMALRLWKKFQEYEDAGIVNQILEEIFREGSKLGFRPP 1075
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. nr
Match: gi|1325283071|ref|XP_023326238.1| (PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like [Eurytemora affinis]) HSP 1 Score: 1113.21 bits (2878), Expect = 0.000e+0 Identity = 599/1269 (47.20%), Postives = 790/1269 (62.25%), Query Frame = 0 Query: 2 EFSDPSVHGHEDTNDIAS-HMGNLESEDYEDQSYMPSSEFNLLNSVVGDGITKEKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLH-NQRTGRILMGGIQEKLIDFDTNSAKEFKVHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQSVRQGMAQP-DRFLMMYDLRILRAISPLQVMIPPYQLRFLPG----------------------------MCSQVAILSSMGQVQLVDTADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSS--VEEPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRYANVFAKDIKECDPKHGAFDNHSPGIQSIPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHTCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQHSMWACNVPRLIQSWNRFILHQISNQL-------------NVYELGLPSATRRRYRNSSSGSSGSRSSSFGSQESLQ----------SNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPDG---KPNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAI-----------QSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAEDIGDKLRRIGVSWIPEEIELNLLENGDVKSSAEKTESKVVETRKYHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIASPVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLLSRGRKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVPE 1200 +++ S+ G ++ D N SE++ + EF N VVGDG G++A+ FD EELLWMG ++GHVTSYYGP LQKYTSFQV+ E VR++ D+ I LTQ+SLR Q+RRGIP+FTHSS NM +M LL QR ++LMGGIQEK+I D KE ++ +D G SCA++R + R+V CG+ + GK+ LRDP +L V H+LD H+G L+DFD+ G+HL++CG + R G Q DRFLM+YDLRI+R+++P+Q ++ P QLR + + +Q +L+S VQLVDTA++TT SL++FQ + G +S DISPSN C+AFGD + I LYS+ V EP Y R+TEF +PSM I+D AIYSSIP P+LP ++TTY SD WP+RF +P +R P I+ EILR+MK VGSIGYA NL N KRN ++Y D + + + + ++ S+P Y+K IK+ KM D+FDFD FN+T FCGLEA+LPNSYCNAMLQ LY+TEK RL+ LNH C RE+C+ CELS+LFHM+D G+PCQ +NFLR+ RTIPEASAL L+FS+ +S+ +VPR+IQSWNRFIL QI Q G +AT + SS +S ES+ D+G V D +Q+ G QDK C+KC T ++ LLLCNL+YP+ K ++F E++ SSLC +Q TPAWC+ CKKYQPT QSR++ LP TLSLNAGMDNP D++FWNTQM L E+S P + Q PP K CRY SC+R DCKFWH QE A D+GD+L +I SW+P E+ L+L +G V +S K + ++++ Y L ++C I+DP N+V+ + V N I++ +++ L+ + G K + F TP + +KG DL+AIDAEFVTLNQEE+ELRSDGKV+T+KAAHMSVARITCVRG G++EGVPFIDDYISTQE+VVDY+TK+SGI PGDLD SSK+LTTLKS Y+KLR+LVDTG +F+GHGLKNDF+VINLVV +Q+IDT+ LYHLPH+R +SLKFLAWYFL IQG THDSIEDAVT+L LYKK++++K +++E L +Y+ GK LNWKVP+ Sbjct: 10 QYTPSSILGFQENGDYGEVGFPNPYSEEFSEAYPEDHGEFQAYNHVVGDG-----GCGISALHFDPVEELLWMGNQAGHVTSYYGPNLQKYTSFQVNAAEGVRSLHAFDRGILALTQTSLRCQLRRGIPVFTHSSVNMQEMQCLLQIPQRPNQLLMGGIQEKIISLDLEKVKEIQI--IDSGDSCAVMRFNGRYVGCGETT-GKITLRDPHNLSVCHSLDTHSGTLSDFDMNGHHLVSCGFARRHGNLQAIDRFLMVYDLRIMRSVNPIQCVVEPCQLRLVNSPIIPSFPFRFYFFSDKIHIFPFESLKFILNTQSHVLTS--NVQLVDTAEMTTESLDIFQ--LDTGGGMALSFDISPSNNCVAFGDEHSGISLYSASGVTEPTFTLYPRETEFPQPLPVYPSMRIDDINAIYSSIPLPHLPPDQTTYASDNWPERFARPTFRAVPLIEEEILRTMKKVGSIGYAPNLGNKKRNVIQYNLKKTSDKENNQDLNQSHEENAAYKSSVPKRYKKNDIKLGKMGVDDFDFDNFNKTSFCGLEASLPNSYCNAMLQVLYFTEKLRLIILNHFCSRESCLACELSYLFHMLDTGQGMPCQPANFLRSFRTIPEASALGLIFSEANSISRTSVPRIIQSWNRFILQQIHQQCTDASSRRSSTPPPTRSAAGQLAATAMDWSRSSPAKKTPDPASLAEIESISKAMAEVLSSPQKTDDGPV--DDSPVAQLMGMKQDKITRCSKCHTKTITDNLLLLCNLVYPEQSTLKQKISFGEILCSSLCPEQVTPAWCEKCKKYQPTTQSRRLTCLPQTLSLNAGMDNPSDISFWNTQM-HLILEDSEVGPPKSEAGTARSEKRSNTVKQVAPPHGQKACRYAGSCSRSDCKFWHAGQELLKDPALDVGDQLAKIDKSWVPFELTLHLASDGSVHTSQSKPGIEYIQSQTYLLYAVCCCIVDPVNPDTTNLVSCVKV------------------NPITVDVFSEDKS------------LLQKAGG-----KRITF----------TPLGMEDMPKKG---------------DLIAIDAEFVTLNQEEAELRSDGKVSTVKAAHMSVARITCVRGQGRLEGVPFIDDYISTQEQVVDYLTKFSGIKPGDLDANFSSKHLTTLKSTYQKLRFLVDTGAMFVGHGLKNDFRVINLVVSSDQIIDTLYLYHLPHNRYVSLKFLAWYFLKATIQGATHDSIEDAVTSLRLYKKFLEMKRENKVMENLTRMYEVGKELNWKVPD 1203
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. nr
Match: gi|1227988173|ref|XP_021925783.1| (PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X2 [Zootermopsis nevadensis]) HSP 1 Score: 1098.19 bits (2839), Expect = 0.000e+0 Identity = 605/1275 (47.45%), Postives = 801/1275 (62.82%), Query Frame = 0 Query: 1 MEFSDPSVHG--HEDTNDIASHMGNLESEDYEDQSYMPSSEFNLLNSVVGDGITKEKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFKVHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQSVRQGMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDTADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSS-VEEPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRYA-----------NVFAKDIKECDPKHGAFDNHSPGIQSIPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHTCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQH--SMWACNVPRLIQSWNRFILHQISNQL--------------------------------------NVYELGLPSATRRRYRNSSSGSSGSRSSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPD---GKPNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAED--IGDKLRRIGVSWIPEEIELNLLENGDVKSSA------EKTES-----KVVETRKYHLLSICYTILDPTTNQAHNVVAAINVGQYYHAR-IASPVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSL-LSRG-RKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVPEDD 1202 + +SD S H EDT ++ S G + + ++ + Y ++EF ++++ DG + GV+AI FD EELLWMG + GHVTSYYG LQKYTSFQVH +EVR++ T + I LTQ++LR Q+RRGIP+FTHSS NM +M L R +LMGG Q+K+I+F+ + +E + + CAILR H RF+C GD + G++ LRDP++LKV HTL+AH+G L+DFDV+GN L+TCG S RQG DRFLM+YDLR++RA++P+QVM+ P LRF+P S++ +S++GQ+QLVDT ++ P+L ++QV G +++D+S S QC+AFGD SIH Y+S + N ++R+TEFAD P +SI D++ SS+P PY + LSD WP+++ K YR TPPIDPEILR+MK+ G+IGYA N +RNQV Y +F D + K G N +IP YRKI +K +KM ++FDFD++N+T F GLEA LPNSYCNAMLQ LYY R + L+H C +E C+ CEL +LFHM+DIS G PCQSSNFLR RTIPEASAL L+ SDQ+ S N+ +LIQSWNRFILHQI ++ +++ +P A+ + + S+ G S + EDE + S+++G + + C KC I+ E +LLCNLIYPD GK +F +V+ SLC +QTTPAWCD+C KYQPT Q+R++K LP+ L++N G+DN Q+ FW TQM ++ + + IQ V P+ +PCRYG +C+RP C+F HP K E+ L SW+P I + LL G V E E+ V + Y L +I I P ++ N+VA INVG YH R + SPVSQWY FND SIS + +E W +L WK+PC L Y ++P NPIT VF R L L+ G RK I FTPLA DEMP GD+VA+DAEFVTLNQEE+EL SDGK++TIK +HMSVARITC+RG G +EG PFIDDYISTQE+VVDY+T++SGI PGDLD SSK+LTTLK+ Y+KLR+LVD G F+GHGLKNDF+VINLVVP +QVIDTVLL+HLPHHRM+SL+FLAW+FL KIQ THDSIEDA TAL LY++Y Q++A + + LY+ GK L WKVP D Sbjct: 25 LMYSDGSAHYPLEEDTYELPSE-GFVPTSEHFAEGYT-NAEFQETHTILADGGDR---FGVSAIAFDQQEELLWMGNQGGHVTSYYGQGLQKYTSFQVHANQEVRHIHTFEDGILALTQTALRCQIRRGIPVFTHSSDNMEEMQCQLQISRD-TLLMGGHQDKVIEFNLSQGQETNLLHVGKNG-CAILRLHPRFICAGDPT-GRIDLRDPSTLKVEHTLEAHSGSLSDFDVHGNLLVTCGFSNRQGSLSVDRFLMVYDLRMMRAVTPIQVMLDPLLLRFMPSFSSRLVTVSALGQMQLVDTVALSQPNLCLYQVNT--AGSMCLALDVSSSCQCMAFGDGGGSIHFYTSNPHRAMFNSFSRETEFADPVEPLPPISILDDVTPLSSVPLPYYQPG-SMLLSD-WPEQYLKKVYRRTPPIDPEILRTMKMQGTIGYAPNPMGHRRNQVAYKLQKHGGGHSQIKLFGNDSRTG--KSGEEAN----FIAIPKRYRKIDVKYSKMGMNDFDFDQYNKTRFPGLEATLPNSYCNAMLQVLYYMSPVRSVLLSHLCHKEFCLACELGYLFHMLDISQGFPCQSSNFLRVFRTIPEASALGLILSDQNPESKKKANLIQLIQSWNRFILHQIHYEILETRKQKLLEQQRQNDLSQAADRDYFVYKEKDFPSILGDIHTRLVPKASVDSLAIHDADENISKKRMEGKTSSRREAEDEET------EISRLFGMKKIHVHRCLKCGHEISKESIVLLCNLIYPDITSGKVEFSFCDVLLQSLCPEQTTPAWCDSCDKYQPTLQTRQLKVLPNILTMNCGLDNQQNKCFWQTQMDQVV------QKVLNQTGIQGVSGPSGRPCRYGSNCSRPGCRFKHP-----GKTGENYTANTGLLYNTHSWLPMHIRIELLRKGGVNIRKIPPVDNEPPENVVMSEDVTQAISYDLAAIVCYIDYPHQHEGKNLVALINVGPSYHCRAMGSPVSQWYIFNDFSISPVPAQEVIWFSLDWKIPCAL-YWVNRDMPKNMIPPAHNPITIDVFLEDRCLALNNGARKMITFTPLAADEMPGQGDIVAMDAEFVTLNQEEAELHSDGKLSTIKPSHMSVARITCIRGYGPLEGTPFIDDYISTQEQVVDYLTQFSGIKPGDLDANFSSKHLTTLKATYQKLRFLVDNGVKFVGHGLKNDFRVINLVVPADQVIDTVLLFHLPHHRMVSLRFLAWHFLGLKIQSVTHDSIEDARTALQLYQRYQQVEAEGSVTATMKELYEAGKQLQWKVPGVD 1263
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. nr
Match: gi|1339091049|ref|XP_023706705.1| (PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X2 [Cryptotermes secundus]) HSP 1 Score: 1093.95 bits (2828), Expect = 0.000e+0 Identity = 598/1258 (47.54%), Postives = 784/1258 (62.32%), Query Frame = 0 Query: 1 MEFSDPSVH--GHEDTNDIASHMGNLESEDYEDQSYMPSSEFNLLNSVVGDGITKEKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFKVHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQSVRQGMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDTADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSS-VEEPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRY------ANVFAKDIKECDPKHGAFDNHSPGIQSIPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHTCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQ--HSMWACNVPRLIQSWNRFILHQI-------------------------SNQLNVYELGLPSATRRRYRNSSSGSSGSRSSSFGSQESLQSNEDEGS------VHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPD---GKPNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAEDIGDKLRRIGVSWIPEEIELNLLENG----------DVKSSAEKTESK-VVETRKYHLLSICYTILDPTTNQAHNVVAAINVGQYYHARI-ASPVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLLSR--GRKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVP 1199 + ++D S H DT ++ S + SE + + +EF ++++ DG + GV+A+ FD EELLWMG + GHVTSYYGP LQKYTSFQVH +EVR++ T + I LTQ++LR QMRRGIP+FT+SS NM +M L R +LMGG Q+KLI+F+ N +E + + CAILR H RF+C GD + G++ LRDP +L+V HTL+AH+G L+DFDV+GN L+TCG S RQG DRFLM+YDLR++RA++P+QVM+ P LRFLP S++ +S++GQ+QLVDT ++ +L ++Q+ G +S+D+S S QC+AFGD SIH Y+S + N ++R+TEFAD P +SI D++ SSIP PY T+ LSD WP+++ K YR PIDPEILR+MK+ G+IGYA N +RNQV Y + D + G + I +IP YRKI +K +KM ++ DFD++NRTGF GLEA LPNSYCNAMLQ LYY R + L+H C +E C+ CEL +LFHM+D+S G PCQSSNFLRA RT+PEASAL L+ SDQ S N+ +LIQSWNRFILHQI +N E PS + S + G+ + + ES +++G + S ++G Q + C KC ++ E +LLCNLIYPD GK +F +V+ SLC +QTTPAWCD C KYQPT QSR++K LP L++N G+D+ Q+ FW TQM ++ + + Q +KPCRY SC+RP C+F HP + + L SW+P I + LL G D++SS T S+ V + Y L +I I P ++ N+VA INVG YHAR SPVSQWY FND SIS + E W +L WK+PC+L Y ++P +NP+T VF + L R+ I FTPLA DEMP GD+VA+DAEFVTLNQEE+ELRSDGK++TIK +HMSVARITC+RG G +EG PFIDDYISTQE+VVDY+TK+SGI PGDLD SSK+LTTLK+ Y+KLR+LVD G F+GHGLKNDF+VINLVVP +QVIDTVLL+HLPHHRM+SL+FLAW+FL IQ THDSIEDA TAL LY+ Y QL+ + L LY+ GK L WKVP Sbjct: 21 LMYADGSAHYPVEGDTYELPSEGFDPASEHFAEG--YTDAEFQETHTILADGGER---FGVSAVAFDQQEELLWMGNQGGHVTSYYGPGLQKYTSFQVHANQEVRHIHTFEGGILALTQTALRCQMRRGIPIFTYSSDNMEEMQCQLQTSRD-VLLMGGHQDKLIEFNLNQCQETNLLHVGKNG-CAILRQHPRFICAGDPT-GRIDLRDPNTLQVEHTLEAHSGSLSDFDVHGNLLVTCGFSNRQGSLSVDRFLMVYDLRVMRAVTPIQVMLNPLLLRFLPSFSSRLVTVSALGQMQLVDTVALSQSNLCLYQINTA--GLMCLSLDVSSSCQCMAFGDGGGSIHFYTSNPHAAMFNSFSRETEFADPVEPLPPISILDDVTPLSSIPLPYCQQG-TSLLSD-WPEQYLKKVYRRPAPIDPEILRTMKMQGTIGYAPNPMGCRRNQVAYKLEKHGGGRRQSKLFNSDSRTGKSGEEANFI-AIPKRYRKIDVKYSKMGMEDCDFDQYNRTGFSGLEATLPNSYCNAMLQLLYYVNPVRSILLSHLCHKEFCLACELGYLFHMLDVSQGFPCQSSNFLRAFRTVPEASALGLILSDQSPESKKKTNLIQLIQSWNRFILHQIHYEILETRKQKLLEQQRKNGFHTDGANYFVYKEKDFPSILGDIHSRLVSKAHGNSLAIHDADESRSEKQEKGESSTGKEAQDEETEISHLFGMKQIHVHRCLKCGREVSKESIVLLCNLIYPDITAGKVEFSFCDVLLQSLCPEQTTPAWCDCCDKYQPTLQSRQLKVLPDILAMNCGLDSQQNKCFWQTQMDQVV------QKVLDQTGFQGAGGSTSKPCRYASSCSRPGCRFKHPGR---IGENSTTNTGLLYNTHSWLPMHIRIELLRKGGVNIRKIPPADMESSDGVTVSEDVTQAISYDLAAIVCYIDCPHQHEKKNLVALINVGPSYHARSKGSPVSQWYIFNDFSISPVPAHEVNWFSLDWKIPCVL-YWVNRDMPENVVSKVQNPLTVDVFFEDKCLARNNGARRMITFTPLAADEMPGQGDIVAMDAEFVTLNQEEAELRSDGKLSTIKPSHMSVARITCIRGYGPLEGTPFIDDYISTQEQVVDYLTKFSGIKPGDLDANFSSKHLTTLKATYQKLRFLVDNGVKFVGHGLKNDFRVINLVVPADQVIDTVLLFHLPHHRMVSLRFLAWHFLGITIQSVTHDSIEDARTALQLYQHYQQLERKGNVTSALKELYEVGKRLQWKVP 1255
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. nr
Match: gi|817211943|ref|XP_012282135.1| (PAN2-PAN3 deadenylation complex catalytic subunit PAN2 [Orussus abietinus]) HSP 1 Score: 1075.08 bits (2779), Expect = 0.000e+0 Identity = 599/1279 (46.83%), Postives = 779/1279 (60.91%), Query Frame = 0 Query: 38 SEFNLLNSVVGDGITKEKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEF-KVHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQS-VRQGMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDT--ADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSS-VEEPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRYANVFAKDIK----ECDPKHGAFDNHSPGIQSIPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHTCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQH--SMWACNVPRLIQSWNRFILHQISNQLNVYELGLPSATRRRYRNSSSG---SSGSRSSSFGSQES------------LQSNED-----------------EGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPD---GKPNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAEDIGDKLRRIGV-------------SWIPEEIELNLLENGD--------------------------VKSSAEKTES-----------------------------KVVETRKYHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIA-SPVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLL-SRGRKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVPE 1200 +EF+ +++ DG + GV+ TFDT EEL+WMG + GHVTSYYG LQKYTSFQVH T++VR++ +D+ I VLTQS LR Q+RRGIP+F+H+S NM+DM +L T R+LM G QEKLIDF+ KE VH + G CAILR H+R VC G+ + G++ LRDP +L V HTLD H+G L+DFDV GN+L+TCG S RQG++ DRFLM+YDLR +RA+SP+ M+ P L+FLP S++A++S GQ+QL+DT A+V ++QVA G +S D+SP++QCL FGD+ +IHL S+ EP N ++R TEFAD + +D+ +S+IP Y LSD WP+ + K YR TPPIDPEILR+MK+ G+IGYA N +RNQ+ Y + + +P+ + D +IP YRKI K +++ +DEFDFD++NRT FCGLEA LPNSYCNAMLQ LYY E R+ L+H+C+RE C+ CEL FLFHM+D S G PCQ++NFLRA RT+PEASAL L+ SD H + ++ RLIQSWNRFILHQ+ YE+ TR+R + + +G + F E ++NED E V + S+++G Q + C KC + +LLCNL YP+ V F V++ SL ++ TPAWCDAC+K+ PT QSRK+ LP L+LN G+D+ +D +FW QM + + +D PA V P KPCRYG +C R C+F H +E A G SWIP I + L ENG+ +K+S E+ ES K V+ + ICY + D T++ NVVA I VG YH R++ S VSQWY FND SIS + P+EA W NL WK+PC+L Y T P + F +P+T VF + + S G +GI FTPL DEMPK G+LV IDAEFVTLNQEE+ELRSDGK++TIK +HMSVARITC+RG G +EG PFIDDYISTQE+VVDY+TK+SGI PGDLD SSK+LTTLKS Y+KLR+LVD G IF+GHGLKNDF+VINLVVP EQ++DTVLL+HLPHHRM+SL+FL W+FL KKIQ +THDS EDA AL LY KY +L++S RL E L LY G L WKVP+ Sbjct: 51 AEFHETRTLLADGGDR---FGVSTATFDTIEELMWMGNQGGHVTSYYGSGLQKYTSFQVHATQQVRHIHPVDEGILVLTQSMLRCQLRRGIPIFSHTSTNMMDMQCMLQIAPT-RLLMAGHQEKLIDFNLTRGKETGTVHVGEHG--CAILRQHSRLVCAGNPA-GRIDLRDPNTLSVEHTLDTHSGSLSDFDVQGNYLVTCGFSNSRQGLSV-DRFLMVYDLRQMRALSPVTTMVYPLLLKFLPSYSSRLAVVSPFGQMQLLDTIYANVQPTMTCLYQVAT--GGALVLSFDVSPTSQCLCFGDSAGTIHLMSTNTSEPQFNTFSRPTEFADPVETLQPIPFDDDSTPFSTIPMIY---TGHALLSD-WPEEYMKKVYRKTPPIDPEILRTMKMQGTIGYAPNPQAFRRNQIPYNTEKRRGVVTKLFATEPRSKSED---ATFVAIPKRYRKIEAKYSRLGYDEFDFDQYNRTSFCGLEATLPNSYCNAMLQLLYYCEPIRIALLSHSCQREFCLSCELGFLFHMLDTSRGWPCQAANFLRAFRTVPEASALGLILSDLHPEAKRKTSLARLIQSWNRFILHQMH-----YEI---LETRKRLQEEAEAMRLKTGPKYPPFVYNEEDFPSILQDLGSRYKTNEDDRKKRRKQEGDDSKKPEENEVRDEETEISRLFGSEQIHIHRCLKCGQEASKRSIMLLCNLSYPEMMSASDEVPFTTVLARSLSPEKITPAWCDACQKFAPTLQSRKLTKLPLILALNCGLDSKEDKSFWQRQMDIVVQKVLGVKD--FSPASSPV-PVTIKPCRYGTNCTRAGCRFRHAGRESDTTAASSPGTPPTSTSGPVPTPPSHLYYSHSWIPHNIRVTLDENGELAIERLEKPAQPTEKLVVENGQGDNIIKTSDEQEESAREKLANEGDGGGSDGTEADDSAQGNLERKAVDIQYTLTAVICY-VDDKTSDDRKNVVALIRVGPNYHERLSGSAVSQWYIFNDFSISAVTPQEAVWFNLDWKVPCVLHYTAT---PAPESAQFVSPLTYDVFGEDKCVARSGGTRGITFTPLTSDEMPKSGELVGIDAEFVTLNQEEAELRSDGKMSTIKPSHMSVARITCIRGQGPLEGTPFIDDYISTQEQVVDYLTKFSGIQPGDLDANFSSKHLTTLKSTYQKLRFLVDNGIIFVGHGLKNDFRVINLVVPAEQIVDTVLLFHLPHHRMVSLRFLTWHFLGKKIQSETHDSAEDARAALALYHKYKELESSGRLTEVLKELYSAGTKLQWKVPD 1297
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. nr
Match: gi|1000764186|ref|XP_015605177.1| (PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X3 [Cephus cinctus]) HSP 1 Score: 1071.23 bits (2769), Expect = 0.000e+0 Identity = 606/1325 (45.74%), Postives = 797/1325 (60.15%), Query Frame = 0 Query: 5 DPSVHGHEDTNDIASHMGNLE------SEDYEDQSYMPSSE----------FNLLNSVVGDGITKEKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFK-VHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQS-VRQGMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDT--ADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSS-VEEPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRY---------ANVFAKDIKECDPKHGAFDNHSPGIQSIPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHTCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQH--SMWACNVPRLIQSWNRFILHQI-----------------------SNQLNVY-ELGLPSATR---RRYRNSSSGSSGSRSSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPD---GKPNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAEDIGDKLRRIGV-----------SWIPEEIELNLLENGDV----------------------------------------------------KSSAEKTES--KVVETRKYHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIA-SPVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLL-SRGRKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVPE 1200 D SV GH D A+ +G E + D + ++P++E F +++ DG + GV+ ITFDT EEL+WMG + GHVTSYYG LQKYTSFQVH ++EVR++ +D+ I VLTQS LR Q+RRGIP+FTH+S NMIDM +L T R+LMGG QEK+IDF+ KE VH + G CAILR H+R VC G+ + G++ LRDP +L + HTLD H+G L+DFDV N+L+TCG S RQG++ DRFLM+YDLR +RA+SP+ ++ P L+FLP S++A++S +GQ+QL DT A+V ++QVA G +S D+SP++QCL FGD SIHL S+ EP N ++R TEFAD ++ +D + S+IP Y T LSD WP+ + K YR TP IDPEILR+MK+ G+IGYA N +RNQ+ Y +FA D + + G F +IP YRKI +K +++ +DEFDFD++NRT FCGLEA LPNSYCNAMLQ LYY E R+ L+H+C+RE C+ CEL FLFHM+D S G PCQ++NFLRA RT+PEA+AL L+ SD H + ++ RLIQSWNRFILHQ+ N VY E PS + RYR R S +S E+ +D ++ S+++G Q + C KC + +LLCNL+YP+ V F V+ SL ++ TPAWCD+C+K+ PT QSR++ LP L+LN G+D+ QD FW QM + + + PA V P KPCRYG++C R C+F H ++P A A I + SWIP IE+ L +NG++ + ++ +TES +V+ +Y L ++ + D N+VA I VG YYH R+A S VSQWY FND IS + P+EA W NL WK+PC+L Y +P + +P+T VF + + S G +GI FTPL DEMPK G+LVAIDAEFVTLNQEESELRSDGK++TIK +HMSVARITC+RG G +EG PFIDDYISTQE+VVDY+TK+SGI PGDLD SSK+LTTLKS Y+KLR+LVD G IF+GHGLKNDF+VINLVVP EQ+IDTVLL+HLPH RM+SL+FL W+FL KKIQ +THDS EDA AL+L+ KY +L+ S +L++ L LY G L WKVPE Sbjct: 2 DYSVLGHYDPCVEAAAVGEQELLWEESNYDLSGEGFVPAAEQFGEEFAGAEFQETRALLADGGDQ---FGVSTITFDTVEELMWMGNQGGHVTSYYGSGLQKYTSFQVHASQEVRHIHPVDEGILVLTQSILRCQLRRGIPIFTHTSSNMIDMQCMLQISPT-RLLMGGHQEKIIDFNLTRGKETGLVHVGEHG--CAILRQHSRLVCAGNPA-GRIDLRDPNTLSIEHTLDTHSGSLSDFDVQENYLVTCGFSNSRQGLSV-DRFLMVYDLRQMRALSPVTTLVYPLLLKFLPSYSSRLAVVSPLGQMQLFDTIYANVQPSMTCLYQVAT--GGALVLSFDVSPTSQCLCFGDAAGSIHLMSTNTPEPQFNTFSRPTEFADPVETLQPIAFDDHMTPLSTIPMMY---TGHTLLSD-WPEEYLKKVYRKTPSIDPEILRTMKMQGTIGYAPNPQAFRRNQIPYNLEKRRGVVTKLFAGDSRS-KTEDGTF-------VAIPKRYRKIEVKYSRLGYDEFDFDQYNRTSFCGLEATLPNSYCNAMLQLLYYCEPVRIALLSHSCQREFCLSCELGFLFHMLDTSRGFPCQAANFLRAFRTVPEAAALGLILSDLHPEAKRKTSLIRLIQSWNRFILHQMHYEVLETRKRQQEEEAMRLKTDPKNPPFVYNEQDFPSILQDLGSRYRIHDEERKKRRKQEDDDNNSKKSVEENDVRDEDTEI-SRLFGSEQIHIHRCLKCGQEASKHSIMLLCNLVYPEVSSSTEEVPFTRVLGRSLRPEKITPAWCDSCQKFTPTLQSRQLTKLPQILALNCGLDSQQDKDFWQNQMDIVVQKVVSGK--VFSPASSPV-PITIKPCRYGVNCTRVGCRFRHVGRDPEANPASPAAPVSSAIPITAPPSHLYYSHSWIPHNIEVILYDNGELSIEKLDKINQGDTNGSNSSSPKVVIENGQGDNKIEKDAETVKDQNEKDTSNPEGTSSRTESNKNIVKKVQYILSAVVCYVDDKNDEDRRNIVALIRVGPYYHERLAGSAVSQWYIFNDFCISAVTPQEAVWFNLDWKVPCVLHYTA---IPAPETAQVISPLTYDVFGEDKCIARSGGTRGITFTPLTSDEMPKKGELVAIDAEFVTLNQEESELRSDGKMSTIKPSHMSVARITCIRGQGPLEGTPFIDDYISTQEQVVDYLTKFSGIQPGDLDANFSSKHLTTLKSTYQKLRFLVDNGIIFVGHGLKNDFRVINLVVPPEQIIDTVLLFHLPHRRMVSLRFLTWHFLHKKIQSETHDSAEDARAALELHHKYKELENSGKLMDALKELYSVGTQLQWKVPE 1297
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. nr
Match: gi|915664673|gb|KOC66794.1| (PAB-dependent poly(A)-specific ribonuclease subunit 2 [Habropoda laboriosa]) HSP 1 Score: 1071.23 bits (2769), Expect = 0.000e+0 Identity = 596/1256 (47.45%), Postives = 783/1256 (62.34%), Query Frame = 0 Query: 38 SEFNLLNSVVGDGITKEKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFK-VHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQS-VRQGMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDT--ADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSS-VEEPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRY---------ANVFAKDIKECDPKHGAFDNHSPGIQSIPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHTCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQH--SMWACNVPRLIQSWNRFILHQISNQL------------------------NVY-ELGLPSA---------------TRRRYRNSSSGSSGSRSSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPD-GKPN--VAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTEN-SPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQE----------PTAKKAEDIGDKLRRI--GVSWIPEEIELNLLENGDVK----------SSAEKTESKVVETR------KYHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIA-SPVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLL-SRGRKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVPEDDA 1203 +EF+ +++ DG + GV+ TFD EEL+WMG + GHVTSYYG LQKYTSFQVH T+EVR++ LD+ I +LTQS LR Q+RRGIP+FTH S NMIDM +L T R+LMGG QEK+IDF+ KE VH + G CAILR H+R +CCG+ + G++ LRDP +L + HT D H+G L+DFDV GN+L+TCG S RQG++ DRFLM YDLR +RA+SP+ ++ P L+FLP S++A++S +GQ+QL+DT A+V ++QVA G +S D+SP++QCL FGD+ SIHL S+ EP N ++R TEFAD + S+S D++ S+IP Y LSD WP+ + K YR TP ID EILR+MK+ G+IGYA N +RNQ+ Y A +FA D + G F +IP YRKI +K +++ +DEFDFD++NRT FCGLEA LPNSYCNAMLQ LYY E R+ L+H+C+RE C+ CEL FLFHM+D SPGLPCQ++NFLRA RT+PEA+AL L+ SD H + N+ RLIQSWNRFILHQI ++ VY E PS RRR + S S++S++ NE V + S+++G Q + C KC T +LLCNL+YP+ +P+ V F V++ SL ++ TPAWCD C+K+ PT QSR++ LP L+LN G+D QD FW QM + + S +E + P KPCRYG +C R C+F H ++ P + I + SWIP IE+ + +G++ + K + K+++ +Y L ++ I D + N+VA + VG YH R A S VSQWY FND IS + P+EA W NL WK+PC+L Y +P + AF +P+T VF + + S G +GI FTPL DEMPK G+LVAIDAEFVTLNQEESELRSDGK++TIK +HMSVARITC+RG G +EG PFIDDYISTQE+VVDY+TK+SGI PGDLD SSK+LTTLKS Y+KLR+LVD G IF+GHGLKNDF+VINLVVP EQ++DTVLL+HLPHHRM+SL+FL W+FL KKIQ +THDS EDA AL+LY+KY +L+ S +L E L LY+ G L WKV +D+ Sbjct: 54 AEFHETRTLLADGGDR---FGVSTATFDNVEELMWMGNQGGHVTSYYGAGLQKYTSFQVHATQEVRHIHPLDEGILILTQSLLRCQLRRGIPIFTHMSSNMIDMQCMLQISPT-RLLMGGHQEKIIDFNLTRGKETGLVHVGENG--CAILRQHSRLICCGNPA-GRIDLRDPNTLSIEHTFDTHSGSLSDFDVQGNYLVTCGFSNSRQGLSV-DRFLMAYDLRQMRALSPVTTLVYPLLLKFLPSYSSRIAVVSPLGQMQLLDTIYANVQPAMTCLYQVAT--GGAMILSFDVSPTSQCLCFGDSAGSIHLMSTNTPEPQFNTFSRPTEFADPVDSVQSISFGDDVTPLSTIPIVY---TGHPLLSD-WPEEYLKKIYRKTPSIDTEILRTMKMQGTIGYAPNPQAFRRNQIPYNLEKRRGVVAKLFAGDSRS-KTDDGTF-------VAIPKRYRKIEVKYSRLGYDEFDFDQYNRTSFCGLEATLPNSYCNAMLQLLYYCEPVRIALLSHSCQREFCLSCELGFLFHMLDTSPGLPCQAANFLRAFRTVPEAAALGLILSDLHPEAKRKTNLIRLIQSWNRFILHQIHYEILETRKRQQEEEEATRLKSGPKCQPFVYNEQDFPSILQDIGSRYRSHDVERKRRRKQEGDGKYMWITSKDKNSKKSIEENE----VRDEETEISRLFGSEQMHIHRCLKCGQEATKHSIMLLCNLVYPELMRPSEEVPFTSVLARSLRPEKITPAWCDNCQKFTPTLQSRQLTKLPQILALNCGLDTQQDKLFWQAQMDIVVQKVLSGKESSPSSSPV----PITVKPCRYGNNCTRIGCRFRHVGRDSENVSTSPVTPPITASTPIATPPSHLYYSHSWIPHNIEI-MNNSGELSVEKISTPKNDCNESKKDDKIIQNSDKISKIQYSLSAVVCYIDDKSNEDRRNIVALLRVGPNYHERSAGSAVSQWYIFNDFCISAVTPQEAVWFNLDWKVPCVLHYTA---VPAPEPAAFVSPLTYDVFGEDKCIARSGGTRGITFTPLTSDEMPKKGELVAIDAEFVTLNQEESELRSDGKMSTIKPSHMSVARITCIRGQGPLEGTPFIDDYISTQEQVVDYLTKFSGIQPGDLDANFSSKHLTTLKSTYQKLRFLVDNGIIFVGHGLKNDFRVINLVVPSEQILDTVLLFHLPHHRMVSLRFLTWHFLGKKIQSETHDSTEDARAALELYRKYKELENSAKLAESLKELYNVGNQLQWKVRMNDS 1275
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. nr
Match: gi|1000764184|ref|XP_015605176.1| (PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X2 [Cephus cinctus]) HSP 1 Score: 1068.91 bits (2763), Expect = 0.000e+0 Identity = 606/1331 (45.53%), Postives = 797/1331 (59.88%), Query Frame = 0 Query: 5 DPSVHGHEDTNDIASHMGNLESEDYEDQSYMPSSE----------FNLLNSVVGDGITKEKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFK-VHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQS-VRQGMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDT--ADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSS-VEEPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRY---------ANVFAKDIKECDPKHGAFDNHSPGIQSIPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHTCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQH--SMWACNVPRLIQSWNRFILHQI-----------------------SNQLNVY-ELGLPSATR---RRYRNSSSGSSGSR------------SSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPD---GKPNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTENSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAEDIGDKLRRIGV-----------SWIPEEIELNLLENGDV----------------------------------------------------KSSAEKTES--KVVETRKYHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIA-SPVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLL-SRGRKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVPE 1200 D SV GH D A+ +G + D + ++P++E F +++ DG GV+ ITFDT EEL+WMG + GHVTSYYG LQKYTSFQVH ++EVR++ +D+ I VLTQS LR Q+RRGIP+FTH+S NMIDM +L T R+LMGG QEK+IDF+ KE VH + G CAILR H+R VC G+ + G++ LRDP +L + HTLD H+G L+DFDV N+L+TCG S RQG++ DRFLM+YDLR +RA+SP+ ++ P L+FLP S++A++S +GQ+QL DT A+V ++QVA G +S D+SP++QCL FGD SIHL S+ EP N ++R TEFAD ++ +D + S+IP Y T LSD WP+ + K YR TP IDPEILR+MK+ G+IGYA N +RNQ+ Y +FA D + + G F +IP YRKI +K +++ +DEFDFD++NRT FCGLEA LPNSYCNAMLQ LYY E R+ L+H+C+RE C+ CEL FLFHM+D S G PCQ++NFLRA RT+PEA+AL L+ SD H + ++ RLIQSWNRFILHQ+ N VY E PS + RYR R S S++S++ N+ V + S+++G Q + C KC + +LLCNL+YP+ V F V+ SL ++ TPAWCD+C+K+ PT QSR++ LP L+LN G+D+ QD FW QM + + + PA V P KPCRYG++C R C+F H ++P A A I + SWIP IE+ L +NG++ + ++ +TES +V+ +Y L ++ + D N+VA I VG YYH R+A S VSQWY FND IS + P+EA W NL WK+PC+L Y +P + +P+T VF + + S G +GI FTPL DEMPK G+LVAIDAEFVTLNQEESELRSDGK++TIK +HMSVARITC+RG G +EG PFIDDYISTQE+VVDY+TK+SGI PGDLD SSK+LTTLKS Y+KLR+LVD G IF+GHGLKNDF+VINLVVP EQ+IDTVLL+HLPH RM+SL+FL W+FL KKIQ +THDS EDA AL+L+ KY +L+ S +L++ L LY G L WKVPE Sbjct: 2 DYSVLGHYDPCVEAAAVGEESNYDLSGEGFVPAAEQFGEEFAGAEFQETRALLADG---GDQFGVSTITFDTVEELMWMGNQGGHVTSYYGSGLQKYTSFQVHASQEVRHIHPVDEGILVLTQSILRCQLRRGIPIFTHTSSNMIDMQCMLQISPT-RLLMGGHQEKIIDFNLTRGKETGLVHVGEHG--CAILRQHSRLVCAGNPA-GRIDLRDPNTLSIEHTLDTHSGSLSDFDVQENYLVTCGFSNSRQGLSV-DRFLMVYDLRQMRALSPVTTLVYPLLLKFLPSYSSRLAVVSPLGQMQLFDTIYANVQPSMTCLYQVAT--GGALVLSFDVSPTSQCLCFGDAAGSIHLMSTNTPEPQFNTFSRPTEFADPVETLQPIAFDDHMTPLSTIPMMY---TGHTLLSD-WPEEYLKKVYRKTPSIDPEILRTMKMQGTIGYAPNPQAFRRNQIPYNLEKRRGVVTKLFAGDSRS-KTEDGTF-------VAIPKRYRKIEVKYSRLGYDEFDFDQYNRTSFCGLEATLPNSYCNAMLQLLYYCEPVRIALLSHSCQREFCLSCELGFLFHMLDTSRGFPCQAANFLRAFRTVPEAAALGLILSDLHPEAKRKTSLIRLIQSWNRFILHQMHYEVLETRKRQQEEEAMRLKTDPKNPPFVYNEQDFPSILQDLGSRYRIHDEERKKRRKQEDDGKYMWITSKDNNSKKSVEEND----VRDEDTEISRLFGSEQIHIHRCLKCGQEASKHSIMLLCNLVYPEVSSSTEEVPFTRVLGRSLRPEKITPAWCDSCQKFTPTLQSRQLTKLPQILALNCGLDSQQDKDFWQNQMDIVVQKVVSGK--VFSPASSPV-PITIKPCRYGVNCTRVGCRFRHVGRDPEANPASPAAPVSSAIPITAPPSHLYYSHSWIPHNIEVILYDNGELSIEKLDKINQGDTNGSNSSSPKVVIENGQGDNKIEKDAETVKDQNEKDTSNPEGTSSRTESNKNIVKKVQYILSAVVCYVDDKNDEDRRNIVALIRVGPYYHERLAGSAVSQWYIFNDFCISAVTPQEAVWFNLDWKVPCVLHYTA---IPAPETAQVISPLTYDVFGEDKCIARSGGTRGITFTPLTSDEMPKKGELVAIDAEFVTLNQEESELRSDGKMSTIKPSHMSVARITCIRGQGPLEGTPFIDDYISTQEQVVDYLTKFSGIQPGDLDANFSSKHLTTLKSTYQKLRFLVDNGIIFVGHGLKNDFRVINLVVPPEQIIDTVLLFHLPHRRMVSLRFLTWHFLHKKIQSETHDSAEDARAALELHHKYKELENSGKLMDALKELYSVGTQLQWKVPE 1300
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. nr
Match: gi|1059210446|ref|XP_017752212.1| (PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit PAN2 [Eufriesea mexicana]) HSP 1 Score: 1065.83 bits (2755), Expect = 0.000e+0 Identity = 595/1294 (45.98%), Postives = 776/1294 (59.97%), Query Frame = 0 Query: 38 SEFNLLNSVVGDGITKEKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFK-VHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQSVRQGMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDT--ADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSS-VEEPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRY---------ANVFAKDIKECDPKHGAFDNHSPGIQSIPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHTCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQH--SMWACNVPRLIQSWNRFILHQISNQ------------------------LNVY-ELGLPSATR---RRYRNSSSGSSGSRSSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPD---GKPNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTE--NSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQEPTAKKAEDIGDKLRRIGV-----------------SWIPEEIELNLLENG------------DVKSSAEKTESKVVETRK--------------------------------------------------YHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIA-SPVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLL-SRGRKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVPEDD 1202 +EF+ +++ DG + GV+ TFD EEL+W+G + GHVTSYYG LQKYTSFQVH T+EVR++ LD+ I +LTQS LR Q+RRGIP+FTH S NMIDM +L T R+LMGG QEK+IDF+ KE VH + G CAILR H+R +CCG+ + G++ LRDP +L + HT D H+G L+DFDV GN+L+TCG S DRFLM YDLR +RA+SP+ ++ P L+FLP S++A++S +GQ+QL+DT A+V ++QVA G +S +S ++QCL FGD+ SIHL S+ EP N + + TEFAD + S+S D++ S+IP Y LSD WP+ + K YR TP IDPEILR+MK+ G+IGYA N +RNQ+ Y A +FA D + G F +IP YRKI +K +++ +DEFDFD++N T FCGLEA LPNSYCNAMLQ LYY E R+ L+H+C+RE C+ CEL FLFHM+D S GLPCQ++NFLRA RT+PEA+AL L+ SD H + N+ RLIQSWNRFILHQI + L VY E PS + RYR+ + R + + +S E E V + S+++G Q + C KC+ T +LLCNL+YP+ V F V++ SL ++ TPAWCD C+K+ PT QSR++ LP L+LN G+D QD AFW TQM + + + E P+L P P KPCRYG +C R C+F H ++P E+I SWIP IE++L +G ++ S + TE ++E + Y L ++ I D + N+VA + VG YH R + S VSQWY FND IS + P+EA W NL WK+PC+L Y +P + F +P+T VF + + S G +GI FTPL DEMPK G+LV IDAEFVTLNQEE+ELRSDGK++TIK +HMSVARITC+RG G +EG PFIDDYISTQE+VVDY+TK+SGI PGDLD SSK+LTTLKS Y+KLR+LVD G IF+GHGLKNDF+VINLVVP EQ++DTVLL+HLPHHRM+SL+FL W+FL KKIQ +THDS EDA AL+LY+KY +LK S +L E L LY+ G L WKVPEDD Sbjct: 54 AEFHETRTLLADGGDR---FGVSTATFDNVEELMWIGNQGGHVTSYYGAGLQKYTSFQVHATQEVRHIHPLDEGILILTQSLLRCQLRRGIPMFTHMSSNMIDMQCMLQISPT-RLLMGGHQEKIIDFNLTRGKETGLVHVGEHG--CAILRQHSRLICCGNPA-GRIDLRDPNTLSIEHTFDTHSGSLSDFDVQGNYLVTCGFSNSHQGLSVDRFLMAYDLRQMRALSPVTTVVYPLLLKFLPSYSSRLAVVSPLGQMQLLDTIYANVQPAMTCLYQVATG--GAMILSFHVSSTSQCLCFGDSAGSIHLMSTNTPEPQFNTFFQPTEFADPVESLQSISFNDDVTPLSTIPIVY---TGHPLLSD-WPEEYLKKVYRKTPQIDPEILRTMKMQGTIGYAPNPQAFRRNQIPYNLEKRRGVVAKLFAGDSRS-KTDDGTF-------VAIPKRYRKIEVKYSRLGYDEFDFDQYNYTSFCGLEATLPNSYCNAMLQLLYYCEPVRITLLSHSCQREFCLSCELGFLFHMLDTSRGLPCQAANFLRAFRTVPEAAALGLILSDLHPEAKRKTNLIRLIQSWNRFILHQIHYEILETRKRQQEEEEAARLKTGPKCPLFVYNEQDFPSILQDIGSRYRSHAEERKKRRKQGKNDKNNRKSVE-ESEVRDEETEISRLFGSDQMHIHRCLKCEQEATKHSIMLLCNLVYPELVHPSEEVPFTSVLARSLRPEKITPAWCDNCQKFTPTLQSRQLTKLPQILALNCGLDTQQDKAFWQTQMDIVVKKILSDKESSPSLSPV-----PITVKPCRYGNNCTRIGCRFRHIGRDP-----ENISTPPVTPPTTISTSVATPPSHLYYSHSWIPHNIEISLSNSGELFVEKISSPEINLNESRKSTEEIIIENGQGDNKVQDSEIPENDFEDQETENHINTELYNEDIEKENKIDENLDKISKVQYSLNAVVCYIDDKSNEDRRNIVALLRVGPSYHERSSGSAVSQWYIFNDFCISAVTPQEAVWFNLDWKVPCVLHYTA---VPAPEAAPFVSPLTYDVFGEDKCIARSGGTRGITFTPLTSDEMPKKGELVGIDAEFVTLNQEEAELRSDGKMSTIKPSHMSVARITCIRGQGPLEGTPFIDDYISTQEQVVDYLTKFSGIQPGDLDANFSSKHLTTLKSTYQKLRFLVDNGIIFVGHGLKNDFRVINLVVPPEQIVDTVLLFHLPHHRMVSLRFLTWHFLGKKIQSETHDSAEDASAALELYRKYKELKCSAKLSESLKELYNVGNQLQWKVPEDD 1312
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. nr
Match: gi|972212725|ref|XP_015188826.1| (PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X3 [Polistes dominula]) HSP 1 Score: 1065.45 bits (2754), Expect = 0.000e+0 Identity = 592/1289 (45.93%), Postives = 777/1289 (60.28%), Query Frame = 0 Query: 27 EDYEDQSYMPSSEFNLLNSVVGDGITKEKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFK-VHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQS-VRQGMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDT--ADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSS-VEEPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRY---------ANVFAKDIKECDPKHGAFDNHSPGIQSIPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHTCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQH--SMWACNVPRLIQSWNRFILHQISNQL------------------------NVY-ELGLPSATR---RRYRNSSSGSSGSRSSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPD---GKPNVAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTE--NSPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWH-----------PEQEPTAKKAEDIGDKLRR---IGVSWIPEEIELNL------------------------LENGDVKSSAEKT-----------ESKVVETRK---------------YHLLSICYTILDPTTNQAHNVVAAINVGQYYHAR-IASPVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLL-SRGRKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVPE 1200 E +E++ +EF +++ DG + GV+ TFDT EEL+WMG + GHVTSYYGP LQKYTSFQVH T+EVR + LD+ I VLTQS LR Q+RRGIP+FTH S NM+DM +L T R+LMGG QEK+IDF+ KE VH + G CAILR H+R +C G+ + G++ LRDP +L + HT D H+G L+DFDV GN+L+TCG S RQG+ DRFLM YDLR +RA+SP+ ++ P L+FLP S++A++S +GQ+QL+DT A+V P ++QVA G +S D+S ++QCL FGD+ SIHL S+ EP N ++R TEFAD + +S +D++ +S+IP Y LSD WP+ K YR TPPID E+LR+MK+ G+IGYA N +RNQ+ Y A +FA D + G F +IP YRKI +K +++ +DEFDFD++NRT FCGLEA LPNSYCNAMLQ Y+ E R+ L+H+C+RE C+ CEL FLFHM+D S GLPCQ++NFLRA RT+PEA+AL L+ SD H + ++ RLIQSWNRFILHQI ++ VY E PS + RY++ R + + + +E V + S+++G Q + C KC T +LLCNL+YP+ + F ++ SL ++ TPAWCD C+K+ PT QSR++ LP L+LN G+D QD AFW QM + + N+ E P+ P P KPCRYG +C R C+F H P P + SWIP IE+++ LENG S+ EKT ES+ ET K Y L ++ + D + N+VA + VG YH R S VSQWY FND IS + P+EA W NL WK+PC+L Y +P + + +P+T VF + + S G GI FTPL+ DEMPK G+LV IDAEFVTLNQEESELRSDGK++TIK +HMSVARITC+RG G +EG PFIDDYISTQE+VVDY+TK+SGI PGDLD SSK+LTTLKS Y+KLR+LVD G IF+GHGLKNDF+VINLVVP EQ++DTV L+HLPHHRM+SL+FL W+FL K IQ +THDS ED+ AL+LY+KY +L++S +L E L LY G L WKVP+ Sbjct: 46 EQFEEE--FIGAEFRETRTLLADGGDR---FGVSTATFDTIEELMWMGNQGGHVTSYYGPGLQKYTSFQVHATQEVRQIHPLDEGILVLTQSILRCQLRRGIPIFTHMSPNMVDMQCMLQISPT-RMLMGGHQEKIIDFNLTRGKEIGLVHVGENG--CAILRQHSRLICAGNPA-GRIDLRDPNTLSIEHTFDTHSGSLSDFDVQGNYLVTCGFSHSRQGLTV-DRFLMAYDLRQMRALSPVTTLVYPLLLKFLPSYSSRLAVVSPLGQMQLLDTIYANVQQPLTCLYQVAT--NGAFILSFDVSSTSQCLCFGDSGGSIHLMSTNTSEPQFNTFSRPTEFADPVDSLQPISFDDDITPFSAIPVMY---TGHPLLSD-WPEELLKKIYRKTPPIDSEVLRTMKMQGTIGYAPNPQAFRRNQIPYNLEKRRGVVAKLFASDSR-AKTDDGTF-------VAIPKRYRKIEVKYSRIGYDEFDFDQYNRTNFCGLEATLPNSYCNAMLQLFYFCEPVRVALLSHSCQREFCLSCELGFLFHMLDTSRGLPCQAANFLRAFRTVPEAAALGLILSDLHPEAKRKTSLVRLIQSWNRFILHQIHYEILETRKRQQEEKEAARLKSGPKCAPFVYNEQDFPSILQDLGSRYKSHDKERKKRRKQEEDVDQGNKKSPEENEVRDEETEISRLFGSEQMHIHRCLKCGQEATKHSIMLLCNLVYPEIVNPSKEIPFTNILERSLRPEKITPAWCDECQKFTPTLQSRQLTKLPQILALNCGLDTQQDKAFWQNQMDIVVRKVINNKEASPSSSPV-----PITVKPCRYGSNCTRVGCRFRHIGRDSETLTVSPATTPISNITTTNTSTPPSHLYYSHSWIPHNIEISINENGILSVEKINSPKIDDSTTPTVLENGQDDSNTEKTSNNIEIIKDKNESESAETEKKTEEQTTTSLTSKAQYSLSAVVCYVDDKNNEERRNLVALLRVGPNYHKRSTGSAVSQWYIFNDFCISPVTPQEAVWFNLDWKVPCVLHYTI---IPAPEPSTYVSPLTYDVFGEDKCIARSGGTTGITFTPLSSDEMPKKGELVGIDAEFVTLNQEESELRSDGKMSTIKPSHMSVARITCIRGQGPLEGTPFIDDYISTQEQVVDYLTKFSGIQPGDLDANFSSKHLTTLKSTYQKLRFLVDNGIIFVGHGLKNDFRVINLVVPPEQIVDTVWLFHLPHHRMVSLRFLTWHFLGKTIQSETHDSTEDSRAALELYRKYKELESSGKLAENLKELYTVGTQLQWKVPD 1302
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. nr
Match: gi|1059867602|ref|XP_017788496.1| (PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit PAN2 [Habropoda laboriosa]) HSP 1 Score: 1065.06 bits (2753), Expect = 0.000e+0 Identity = 601/1299 (46.27%), Postives = 785/1299 (60.43%), Query Frame = 0 Query: 38 SEFNLLNSVVGDGITKEKDVGVNAITFDTHEELLWMGTKSGHVTSYYGPQLQKYTSFQVHPTEEVRNMVTLDQSIAVLTQSSLRGQMRRGIPLFTHSSQNMIDMHSLLHNQRTGRILMGGIQEKLIDFDTNSAKEFK-VHDLDPGASCAILRSHNRFVCCGDASRGKVILRDPASLKVAHTLDAHAGLLTDFDVYGNHLITCGQS-VRQGMAQPDRFLMMYDLRILRAISPLQVMIPPYQLRFLPGMCSQVAILSSMGQVQLVDT--ADVTTPSLNVFQVAMPLEGCSTISMDISPSNQCLAFGDTTNSIHLYSS-VEEPILNPYARDTEFADNPTNHPSMSIEDELAIYSSIPRPYLPTNETTYLSDYWPDRFNKPGYRPTPPIDPEILRSMKVVGSIGYARNLTNMKRNQVRY---------ANVFAKDIKECDPKHGAFDNHSPGIQSIPMTYRKIAIKVNKMAHDEFDFDRFNRTGFCGLEAALPNSYCNAMLQTLYYTEKFRLLTLNHTCERENCVVCELSFLFHMMDISPGLPCQSSNFLRALRTIPEASALSLVFSDQH--SMWACNVPRLIQSWNRFILHQISNQL------------------------NVY-ELGLPSA---------------TRRRYRNSSSGSSGSRSSSFGSQESLQSNEDEGSVHKDVDVFSQMYGFVQDKSNMCTKCKTSITNEDTLLLCNLIYPD-GKPN--VAFDEVVSSSLCAKQTTPAWCDACKKYQPTNQSRKVKSLPHTLSLNAGMDNPQDMAFWNTQMTRLYTEN-SPEEDPTLKPAIQSVPPPNAKPCRYGLSCNRPDCKFWHPEQE----------PTAKKAEDIGDKLRRI--GVSWIPEEIELN----------------------------LLENG--------DVKSSAEKTESKVVETR--------------------------KYHLLSICYTILDPTTNQAHNVVAAINVGQYYHARIA-SPVSQWYTFNDISISRIHPEEACWVNLSWKLPCILVYQCTGELPFLKEVAFKNPITEKVFRTPRSLL-SRGRKGIAFTPLAGDEMPKLGDLVAIDAEFVTLNQEESELRSDGKVATIKAAHMSVARITCVRGSGKMEGVPFIDDYISTQEEVVDYVTKYSGILPGDLDVQSSSKYLTTLKSAYKKLRYLVDTGCIFIGHGLKNDFKVINLVVPVEQVIDTVLLYHLPHHRMISLKFLAWYFLSKKIQGDTHDSIEDAVTALDLYKKYVQLKASVRLIEELNNLYDRGKVLNWKVPE 1200 +EF+ +++ DG + GV+ TFD EEL+WMG + GHVTSYYG LQKYTSFQVH T+EVR++ LD+ I +LTQS LR Q+RRGIP+FTH S NMIDM +L T R+LMGG QEK+IDF+ KE VH + G CAILR H+R +CCG+ + G++ LRDP +L + HT D H+G L+DFDV GN+L+TCG S RQG++ DRFLM YDLR +RA+SP+ ++ P L+FLP S++A++S +GQ+QL+DT A+V ++QVA G +S D+SP++QCL FGD+ SIHL S+ EP N ++R TEFAD + S+S D++ S+IP Y LSD WP+ + K YR TP ID EILR+MK+ G+IGYA N +RNQ+ Y A +FA D + G F +IP YRKI +K +++ +DEFDFD++NRT FCGLEA LPNSYCNAMLQ LYY E R+ L+H+C+RE C+ CEL FLFHM+D SPGLPCQ++NFLRA RT+PEA+AL L+ SD H + N+ RLIQSWNRFILHQI ++ VY E PS RRR + S S++S++ NE V + S+++G Q + C KC T +LLCNL+YP+ +P+ V F V++ SL ++ TPAWCD C+K+ PT QSR++ LP L+LN G+D QD FW QM + + S +E + P KPCRYG +C R C+F H ++ P + I + SWIP IE+ ++ENG D++ S + +E K +E +Y L ++ I D + N+VA + VG YH R A S VSQWY FND IS + P+EA W NL WK+PC+L Y +P + AF +P+T VF + + S G +GI FTPL DEMPK G+LVAIDAEFVTLNQEESELRSDGK++TIK +HMSVARITC+RG G +EG PFIDDYISTQE+VVDY+TK+SGI PGDLD SSK+LTTLKS Y+KLR+LVD G IF+GHGLKNDF+VINLVVP EQ++DTVLL+HLPHHRM+SL+FL W+FL KKIQ +THDS EDA AL+LY+KY +L+ S +L E L LY+ G L WKVP+ Sbjct: 54 AEFHETRTLLADGGDR---FGVSTATFDNVEELMWMGNQGGHVTSYYGAGLQKYTSFQVHATQEVRHIHPLDEGILILTQSLLRCQLRRGIPIFTHMSSNMIDMQCMLQISPT-RLLMGGHQEKIIDFNLTRGKETGLVHVGENG--CAILRQHSRLICCGNPA-GRIDLRDPNTLSIEHTFDTHSGSLSDFDVQGNYLVTCGFSNSRQGLSV-DRFLMAYDLRQMRALSPVTTLVYPLLLKFLPSYSSRIAVVSPLGQMQLLDTIYANVQPAMTCLYQVAT--GGAMILSFDVSPTSQCLCFGDSAGSIHLMSTNTPEPQFNTFSRPTEFADPVDSVQSISFGDDVTPLSTIPIVY---TGHPLLSD-WPEEYLKKIYRKTPSIDTEILRTMKMQGTIGYAPNPQAFRRNQIPYNLEKRRGVVAKLFAGDSRS-KTDDGTF-------VAIPKRYRKIEVKYSRLGYDEFDFDQYNRTSFCGLEATLPNSYCNAMLQLLYYCEPVRIALLSHSCQREFCLSCELGFLFHMLDTSPGLPCQAANFLRAFRTVPEAAALGLILSDLHPEAKRKTNLIRLIQSWNRFILHQIHYEILETRKRQQEEEEATRLKSGPKCQPFVYNEQDFPSILQDIGSRYRSHDVERKRRRKQEGDGKYMWITSKDKNSKKSIEENE----VRDEETEISRLFGSEQMHIHRCLKCGQEATKHSIMLLCNLVYPELMRPSEEVPFTSVLARSLRPEKITPAWCDNCQKFTPTLQSRQLTKLPQILALNCGLDTQQDKLFWQAQMDIVVQKVLSGKESSPSSSPV----PITVKPCRYGNNCTRIGCRFRHVGRDSENVSTSPVTPPITASTPIATPPSHLYYSHSWIPHNIEIMNNSGELSVEKISTPKNDCNESSKTNEVVVVENGQGDNKVLEDLEISGKDSEEKAIENHVNAGPHNEVAEKDDKIIQNSDKISKIQYSLSAVVCYIDDKSNEDRRNIVALLRVGPNYHERSAGSAVSQWYIFNDFCISAVTPQEAVWFNLDWKVPCVLHYTA---VPAPEPAAFVSPLTYDVFGEDKCIARSGGTRGITFTPLTSDEMPKKGELVAIDAEFVTLNQEESELRSDGKMSTIKPSHMSVARITCIRGQGPLEGTPFIDDYISTQEQVVDYLTKFSGIQPGDLDANFSSKHLTTLKSTYQKLRFLVDNGIIFVGHGLKNDFRVINLVVPSEQILDTVLLFHLPHHRMVSLRFLTWHFLGKKIQSETHDSTEDARAALELYRKYKELENSAKLAESLKELYNVGNQLQWKVPD 1319 The following BLAST results are available for this feature:
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of pab-dependent poly -specific ribonuclease subunit pan2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold168_size293125:133401..138237+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold168_size293125-snap-gene-1.60 ID=maker-scaffold168_size293125-snap-gene-1.60|Name=pab-dependent poly -specific ribonuclease subunit pan2|organism=Tigriopus kingsejongensis|type=gene|length=4837bp|location=Sequence derived from alignment at scaffold168_size293125:133401..138237+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'pab-dependent poly -specific ribonuclease subunit pan2' has the following synonyms
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