Tk06234, Tk06234 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk06234
Unique NameTk06234
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length895
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 418..438
NoneNo IPR availableCOILSCoilCoilcoord: 764..784
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 781..795
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 836..886
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 781..895
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 812..835
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 796..811
NoneNo IPR availablePANTHERPTHR11588:SF243SUBFAMILY NOT NAMEDcoord: 2..436
coord: 481..793
NoneNo IPR availablePANTHERPTHR11588:SF243SUBFAMILY NOT NAMEDcoord: 434..479
NoneNo IPR availableCDDcd02186alpha_tubulincoord: 435..781
e-value: 0.0
score: 641.51
NoneNo IPR availableCDDcd02186alpha_tubulincoord: 2..434
e-value: 0.0
score: 843.74
IPR002452Alpha tubulinPRINTSPR01162ALPHATUBULINcoord: 360..379
score: 81.18
coord: 45..58
score: 77.13
coord: 88..101
score: 72.93
coord: 385..401
score: 70.34
coord: 422..438
score: 79.39
coord: 274..289
score: 68.96
coord: 347..360
score: 93.16
coord: 148..160
score: 54.17
coord: 18..33
score: 95.27
coord: 120..128
score: 46.59
coord: 161..172
score: 78.78
coord: 214..226
score: 53.14
coord: 321..342
score: 74.18
IPR000217TubulinPRINTSPR01161TUBULINcoord: 134..152
score: 70.75
coord: 153..174
score: 36.85
coord: 178..191
score: 52.87
coord: 10..30
score: 68.58
coord: 380..408
score: 55.32
coord: 108..132
score: 47.16
coord: 95..106
score: 65.77
coord: 192..212
score: 43.73
coord: 53..72
score: 67.55
IPR000217TubulinPANTHERPTHR11588TUBULINcoord: 2..436
coord: 481..793
IPR000217TubulinPANTHERPTHR11588TUBULINcoord: 434..479
IPR003008Tubulin/FtsZ, GTPase domainSMARTSM00864Tubulin_4coord: 405..592
e-value: 5.1E-19
score: 79.2
coord: 49..246
e-value: 1.8E-66
score: 236.8
IPR003008Tubulin/FtsZ, GTPase domainPFAMPF00091Tubulincoord: 480..559
e-value: 5.9E-21
score: 75.5
coord: 3..213
e-value: 6.1E-65
score: 219.0
IPR018316Tubulin/FtsZ, 2-layer sandwich domainSMARTSM00865Tubulin_C_4coord: 594..739
e-value: 1.8E-49
score: 180.3
coord: 248..393
e-value: 3.7E-46
score: 169.4
IPR018316Tubulin/FtsZ, 2-layer sandwich domainPFAMPF03953Tubulin_Ccoord: 263..391
e-value: 1.5E-45
score: 154.4
coord: 609..737
e-value: 1.7E-45
score: 154.2
IPR023123Tubulin, C-terminalGENE3D1.10.287.600coord: 384..434
e-value: 3.2E-32
score: 111.9
coord: 730..782
e-value: 4.4E-31
score: 108.2
IPR036525Tubulin/FtsZ, GTPase domain superfamilyGENE3D3.40.50.1440coord: 1..268
e-value: 7.1E-123
score: 411.2
coord: 435..479
e-value: 4.9E-11
score: 44.6
coord: 480..614
e-value: 4.7E-56
score: 192.2
IPR036525Tubulin/FtsZ, GTPase domain superfamilySUPERFAMILY52490Tubulin nucleotide-binding domain-likecoord: 1..244
IPR036525Tubulin/FtsZ, GTPase domain superfamilySUPERFAMILY52490Tubulin nucleotide-binding domain-likecoord: 435..590
IPR037103Tubulin/FtsZ, C-terminal domain superfamilyGENE3D3.30.1330.20coord: 615..729
e-value: 1.2E-59
score: 201.3
coord: 269..383
e-value: 5.4E-58
score: 195.9
IPR013838Beta tubulin, autoregulation binding sitePROSITEPS00228TUBULIN_B_AUTOREGcoord: 1..4
IPR017975Tubulin, conserved sitePROSITEPS00227TUBULINcoord: 488..494
IPR017975Tubulin, conserved sitePROSITEPS00227TUBULINcoord: 142..148
IPR008280Tubulin/FtsZ, C-terminalSUPERFAMILY55307Tubulin C-terminal domain-likecoord: 246..435
IPR008280Tubulin/FtsZ, C-terminalSUPERFAMILY55307Tubulin C-terminal domain-likecoord: 592..785

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold301_size216225-snap-gene-1.19-mRNA-1maker-scaffold301_size216225-snap-gene-1.19-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk06234 ID=Tk06234|Name=Tk06234|organism=Tigriopus kingsejongensis|type=polypeptide|length=895bp
MREIISIHVGQAGCQIGNACWELYCLEHGIQPDGTIPNDDDIGIEDDSFN
TFFSETGSGKHVPRAVFVDLEPTVIDEIRTGTYRQLFGPSQLLTGKEDAA
NNYARGHYTNGKEFIDVTLDKIRRLVEQCPSLQGFLVFHSFGGGTGSGFT
SLIMEQLSLNYGKKSKLNFSIYPAPRIATAIVEPYNSLLFTHTSLDHSDV
SFLVDNEAIYELCHKQLDVTRPSYTNLNRLIAQIISSITASLRFDGALNV
DLTEFQTNLVPYPRIHFPLATYCPVISPSKAYHERLSVDEMTKTCFEADS
QMVKCDPREGKYMAVCLLYRGDVVPKDVNAAIAQIKVQKTIQFVDWCPTG
FKVGINYQPPTVVPGGDLAKVARAVCCLSNTTAIQAAWERIDHKFDLMYA
KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEAGCQMGNACWELYCLE
HGIQPDGMMPNDSSIGVADDSYSTFFSETRFLVFHSFGGGTGSGFASLLL
ERLSIEFGKKAKLGFSIYPAPHISTAIVEPYNALLYTHTTLEHTDVAFLV
DNQAIYDICRRNLDLTRPTYTNLNRLIAQIISSITASLRFDGALNVDLNE
FQTNLVPYPRIHYPLATYGPVISAEKAYHERLSVSEITNSCFEPENQMVK
CDPRKGKYMAICLLYRGDVVPKDVNAAIAEIKMKKTLQFVDWCPTGFKVG
INYQPPTVVPGGDLAGVQRAVSILSNTTAIRDAWASLDHKFDLMYAKRAF
VHWYVGEGMEEGEFSEAREDLAALELDYEEVGNDNYSEDEEDDGYGDRGY
SGSKRKSSDRAPSTRAPSTRAPSTRAPSTRDNSRYGSNNRSRDRSESRHA
SRDRSASRHDSRNRSGSRSRSYSRSRRDDSRSRGGSRSRSTSRRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002452Alpha_tubulin
IPR000217Tubulin
IPR003008Tubulin_FtsZ_GTPase
IPR018316Tubulin/FtsZ_2-layer-sand-dom
IPR023123Tubulin_C
IPR036525Tubulin/FtsZ_GTPase_sf
IPR037103Tubulin/FtsZ_C_sf
IPR013838Beta-tubulin_BS
IPR017975Tubulin_CS
IPR008280Tub_FtsZ_C
Vocabulary: Cellular Component
TermDefinition
GO:0005874microtubule
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0005200structural constituent of cytoskeleton
GO:0003924GTPase activity
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
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