Tk08865, Tk08865 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk08865
Unique NameTk08865
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1806
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 1209..1414
e-value: 4.3E-33
score: 125.9
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1225..1397
score: 20.28
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 1602..1688
e-value: 7.6E-19
score: 78.6
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 1586..1688
e-value: 1.7E-16
score: 60.5
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1579..1738
score: 14.652
IPR001650Helicase, C-terminalCDDcd00079HELICccoord: 1588..1696
e-value: 1.50521E-23
score: 95.7676
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 989..1183
e-value: 1.3E-7
score: 33.5
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 282..438
e-value: 5.5E-8
score: 34.5
IPR022707Domain of unknown function DUF3535PFAMPF12054DUF3535coord: 537..1010
e-value: 1.2E-76
score: 258.6
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1184..1446
e-value: 5.3E-70
score: 237.3
NoneNo IPR availableGENE3D3.40.50.300coord: 1457..1772
e-value: 1.2E-75
score: 256.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 942..970
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 942..981
NoneNo IPR availablePANTHERPTHR36498FAMILY NOT NAMEDcoord: 1..1381
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..1806
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableCDDcd00046DEXDccoord: 1233..1379
e-value: 1.19721E-17
score: 79.3036
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 1232..1530
e-value: 2.0E-63
score: 214.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1449..1746
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1175..1447
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 213..513
coord: 4..70
coord: 810..866
coord: 988..1256

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold15_size728074-snap-gene-5.16-mRNA-1maker-scaffold15_size728074-snap-gene-5.16-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk08865 ID=Tk08865|Name=Tk08865|organism=Tigriopus kingsejongensis|type=polypeptide|length=1806bp
MGSSRLDRLFTLLATSTSPSTLTLASQQLAQVVRSHPEELCRILSQLHPL
LHASQWETRLAAVQALTAVLADYPTVKSEDEGHAPGGAWTGPSKLYTFAT
FRLADVMAASAPLVSSRGQEFNPAEGLDLSEQKKAINQKFGLSMTSRLTG
GESETDLITEDDLKVETPPTPGLVSARERNRLKRALSKQKSHVQSTQKKA
KKEAKLYRIDRSPADPNQWLLQPFCLYLFRDLFDEAWEIRHGAATALREV
VRLQGRHAGCHRKFAPGDNEPAHRAWLEDVSLRLITVIAKDRFGDFVSDQ
VVAPVRESSAQALASVVNLMEPEAVGQVVEVVLLLLDNPDWQCRHGGLLG
IKYILANRQDLVSDILPRLYPAIFKGLNDSVDDVVGVAAASLVPVVRELT
QNHQDRLQALTDRLWDALKIIDDLTSSTHSIMQLLSEILKNLVEFGQVEQ
LGLVQNGCNGHSDSSHFASKVVRLLPFMSHSSSLVRRATLATLNTLTEHQ
ELAKAFLPVIVKDLSLHLFQRAILEHQAPNLSLLEQIWSNMTLFTPLGPL
LMATCPMYGSWVAMIIQPPNWPIPPHLLLPETVKAGIHQYLGGPDVQHLV
DPVEKDRFVVRGRYLAAKMLGKLAGFIRTPVPGMDYSKDALTPLQMFVTK
ILMPNLNSSCSAYQRMTMSLIVSEWYEQHDEQEVPEVLRATFNRFLVEAP
SYDETRQAATQLQNETVDFIALLKHYKMKLVPELVQLQPTTFTIDQVQLF
LTQTDFKALFATNPKLKTKLNDSLYDRKNTLLGSLNRIANDQAMLTVMNQ
AANAGASVSLGAFPDKLNPVIKPLMESIKREKNELLQALSADKLVRVLEY
CHEQQMLPPLEKVIKNLVNFVSSDPLVTPSFNPEPSATENRSILILWLRE
ARSSSLKNSNKSDRKSNSKAKSSSYSNSLSIKDTLQVNGADQSLAKGKRK
SPSTSNGTSPPPSSAAVDPQEDQEASERLSIQSRGSRLALEKIIRHFHVE
LFTKLPKLYEMTLKSVLAVMRIDQDQSSDLVIALRGLEVAIPVLALDLQS
SLIESLPHLAILLESPFASVRHMSSRCVAELAKVLPVAVMVSIMDQILPL
LSSDLLAHRQGAMECLACLIEKLDIQILPYIALLIVPCMGRMSDPDQDVR
LLASNTFAVLIRLIPLDGAVPEPENLPKQLVERKAHEQRFIHQLMNTSQL
EDFSLPIKIHATLRSYQKDGLNWLAFLNRYKLHGILCDDMGLGKTLQTIC
MLASDHFELQNCQSHPGVFEPSSLVICPPTLCNHWYAEILKFAGNAVLRP
LIYAGPLATRVEIRSLFQTHNVVITSYDVLRNDLSYFSGTFWNYVILDEG
HVIKNGKTKTTVAIKSLLASHRLILSGTPIQNSVLELWSLFDFLMPGFLG
TEKQFASKYSRPIVASRDPKCSPKDQEAGALAMEALHKQALPFILRRMKE
DVLDDLPPKITQDYYCDLSPIQVKLYEDFARSQSTQHMQNGNEALNLSKK
DPAPVVPVNKPHIFQALQYLRKVCNHPKLVLCPKHPEYEAVMGMLHVTNS
HLDEIGLSGKLPALRDLLLQCGIGAQSSSSSEVPVVVQHRALVFFQLKSM
MSIVENDLLKKLMPTVTYLRLDGSVPANARQGIVDKFNNDISYDLLLLST
SVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLIT
RNTIEEKILGLQKFKMITANTVISSDNASLHSMATDQIFDLFSLEDQSPT
DPGESRDQQQGIKALLDNMPELWDERQYEDEYEINAYMSKLEPLSNGSPL
PSTSKL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR011989ARM-like
IPR022707DUF3535
IPR038718SNF2-like_sf
IPR000330SNF2_N
IPR027417P-loop_NTPase
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0005488binding
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