Tk11494, Tk11494 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11494
Unique NameTk11494
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length952
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 552..579
NoneNo IPR availableGENE3D2.170.270.10coord: 601..631
e-value: 1.8E-29
score: 105.3
coord: 801..897
e-value: 1.8E-29
score: 105.3
NoneNo IPR availableGENE3D3.30.60.180coord: 632..682
e-value: 1.8E-29
score: 105.3
NoneNo IPR availableGENE3D3.30.70.3410coord: 683..737
e-value: 1.8E-29
score: 105.3
coord: 762..800
e-value: 1.8E-29
score: 105.3
NoneNo IPR availablePANTHERPTHR12197:SF246SUBFAMILY NOT NAMEDcoord: 418..904
NoneNo IPR availablePANTHERPTHR12197SET AND MYND DOMAIN CONTAININGcoord: 418..904
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 816..894
coord: 587..634
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 186..246
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 418..589
e-value: 1.3E-16
score: 62.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 426..541
IPR001214SET domainPFAMPF00856SETcoord: 599..868
e-value: 1.1E-8
score: 35.5
IPR001214SET domainPROSITEPS50280SETcoord: 584..869
score: 11.631
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 424..495
score: 9.631

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold56_size446035-snap-gene-2.10-mRNA-1maker-scaffold56_size446035-snap-gene-2.10-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11494 ID=Tk11494|Name=Tk11494|organism=Tigriopus kingsejongensis|type=polypeptide|length=952bp
LPAGFFVAPGCQHSIVLIYHQSEPQSPPKIICSIVVDVNMAVKLFVEELE
IPMKEASHMIKTPILKNVSTLLNLIAFLKNDVEDKVPCKLAILNNVQKGI
EELNVMTEVDPDRPLFSTLWVYFDPTHNFKNAYNCFVNRVSFDCPDFEGE
SIGKPNFGHIRDLYAKECGFIARSLIKQGKCLSCKDMLVQAPNEELMFQR
IRVVLGRCRDHGIRISLSKLDCGTSVTFAGYHIRDQDLIFLPPRLPLVFP
PKLVLNILINSPTTAATVMAAVYDESVVEWEPCTTPIFSPGLKKNGGIFL
PSDATTPKTMMEAGCLVPWTFEVKCFPKLCRFCEFVFLSMDEPELIDTLK
LKEDLTRAIGEPKGFIHISYREFCIAHPDVVISSQEGQLVGNGGILEEMS
VRIGDIFEDFMDTQLKLGKDPAKSVAFRDLGNRDYQAKRFTQALSLYTQA
ICFGPPGSEALAYAYANRSAVLLQLKEYNKCLQDLALAIEADYPKKTLYK
LLDRQIKCWVGLGVASRAREALEQLVKALEHTDLDQEKRKNLRNGLDQSI
SLIKEADQAKELRCQLDSLEKELPKLNSVNPNFPSLAKCLSVEHQSDKGR
YVKANRTIKAGELLLVEPAQVAFVGITVKGDFCSHCMRKSSNPLPSPLNS
LEVFCSKACLEQANTTYHPMEAPIIAHLKGCALGKAEWFLAYRAIAQKPL
DFFLANRDKFQSHNAKYGLTESSHDYAADPYEALFNLVVNRQGWNSATDL
FKAFTACFFIRCLHWVGYFGSEPWSGTFSETHILIAKLLVHFMEAATMNS
HEICHLTAPPLNPWFHGHPGRVGPALDIHASLLNHSCDPNIIRIYHGKAI
MAFASKDIQEDDEVTSCYITESLNVPLSERKRQLKVFYNFHCHCTPCEEK
WPPRAQFPSALADLKAHQMKIPVEEVSKLKAVLTKINQFGVNINLEQKKE
NY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR001214SET_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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