Tk12560, Tk12560 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12560
Unique NameTk12560
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length460
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020591Chromosomal replication control, initiator DnaA-likePRINTSPR00051DNAAcoord: 185..199
score: 45.05
coord: 414..433
score: 58.33
coord: 153..173
score: 73.74
coord: 217..231
score: 65.66
coord: 251..278
score: 57.14
IPR013159Chromosomal replication initiator, DnaA C-terminalSMARTSM00760bac_dnaa_c7seqbcoord: 364..433
e-value: 1.7E-33
score: 127.3
IPR013159Chromosomal replication initiator, DnaA C-terminalPFAMPF08299Bac_DnaA_Ccoord: 365..433
e-value: 5.4E-27
score: 93.5
IPR013159Chromosomal replication initiator, DnaA C-terminalCDDcd06571Bac_DnaA_Ccoord: 365..454
e-value: 4.20391E-33
score: 118.001
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 152..280
e-value: 5.2E-9
score: 45.9
NoneNo IPR availableGENE3D1.10.8.60coord: 286..357
e-value: 6.7E-27
score: 95.0
NoneNo IPR availableGENE3D3.40.50.300coord: 121..285
e-value: 1.3E-48
score: 166.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..117
NoneNo IPR availablePANTHERPTHR30050CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAAcoord: 11..455
NoneNo IPR availableCDDcd00009AAAcoord: 133..278
e-value: 1.10998E-17
score: 77.5715
IPR013317Chromosomal replication initiator protein DnaAPFAMPF00308Bac_DnaAcoord: 122..337
e-value: 1.5E-96
score: 322.4
IPR001957Chromosomal replication control, initiator DnaATIGRFAMTIGR00362TIGR00362coord: 6..453
e-value: 7.5E-151
score: 501.0
IPR001957Chromosomal replication control, initiator DnaAPANTHERPTHR30050:SF2CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAAcoord: 11..455
IPR001957Chromosomal replication control, initiator DnaAHAMAPMF_00377DnaA_bactcoord: 4..455
score: 30.308
IPR038454DnaA, N-terminal domain superfamilyGENE3D3.30.300.180coord: 3..63
e-value: 2.7E-7
score: 32.2
IPR010921Trp repressor/replication initiatorGENE3D1.10.1750.10coord: 359..460
e-value: 9.8E-32
score: 110.9
IPR010921Trp repressor/replication initiatorSUPERFAMILY48295TrpR-likecoord: 351..455
IPR018312Chromosomal replication control, initiator DnaA, conserved sitePROSITEPS01008DNAAcoord: 414..433
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 123..331

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold6066_size4140-processed-gene-0.0-mRNA-1snap_masked-scaffold6066_size4140-processed-gene-0.0-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12560 ID=Tk12560|Name=Tk12560|organism=Tigriopus kingsejongensis|type=polypeptide|length=460bp
MVADGVWQSTFSQVQAIDLDNDTIILAVPNSIIRDKLEGTYRGLVEDAIE
HASESPLTVQFDLRPPTLFDSLPDDSIDLSADAAIAPSSAAAGTTRPRAE
AVEAPADKNAPYRPAPSLDGANRYTFEGFVIGPSNRFAHAAALSVAERPG
ESYNPLFIYGSAGLGKTHLLRAIEHYVNDVYPDLRVLYISTEQFLNEFVD
AIRNSSNNEFKRRYRQIDVLLVDDIQFIAGKDGLQEEFFHTFNELYGSGR
QIVLSSDRPPDAIPTLEDRLRSRFMMGLLTDIQPPDVETRMAILHKKADR
DGYFIPSEVSEFIATNITSNIRELEGALTKVTAYANLNRQPMTRELAEQT
LRDFIADRQPRPITVDMILEATSEQFNFDLPELIGKSRRRPLVEARQIAM
YVTRELTDLSFPLIAHAFGGRDHTTVMHACEKIGKQMTERSQIFEKVGAL
ERTVRSRAAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020591Chromosome_initiator_DnaA-like
IPR013159DnaA_C
IPR003593AAA+_ATPase
IPR013317DnaA
IPR001957Chromosome_initiator_DnaA
IPR038454DnaA_N_sf
IPR010921Trp_repressor/repl_initiator
IPR018312Chromosome_initiator_DnaA_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0005524ATP binding
GO:0003688DNA replication origin binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006275regulation of DNA replication
GO:0006270DNA replication initiation
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