af154555_1paired domain transcription factor variant a, maker-scaffold182_size278544-snap-gene-0.11 (gene) Tigriopus kingsejongensis

Overview


Name	af154555_1paired domain transcription factor variant a
Unique Name	maker-scaffold182_size278544-snap-gene-0.11
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of af154555_1paired domain transcription factor variant a vs. L. salmonis genes
Match: EMLSAG00000011463 (supercontig:LSalAtl2s:LSalAtl2s790:313171:331500:-1 gene:EMLSAG00000011463 transcript:EMLSAT00000011463 description:"maker-LSalAtl2s790-augustus-gene-2.37")

HSP 1 Score: 273.863 bits (699), Expect = 3.898e-93
Identity = 149/255 (58.43%), Postives = 179/255 (70.20%), Query Frame = 0

Query:   12 PDTTRHSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICG-RGDSSSGNGWIQGNDEHSNSGSESHWPSESSNENFHGIHQFPPAGLPLHNEGLSCYGHAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQ 265
            P+   HSG+NQLGGVFVSGRPLPD+TRQKIVELAHSGARPC+ISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVAT  VV++++ YK  CPSIFAWEIRD L++DK+C  DSVPS+SSINRV+RNI    G+  +GNG  Q  +       +  WP +   E FH                               T+F  + ++V   EFE++HYPD+  RERLA +I++PE R+QVWFSNRRAKWRR+
Sbjct:   12 PENKGHSGINQLGGVFVSGRPLPDSTRQKIVELAHSGARPCEISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATLQVVNKVKSYKSACPSIFAWEIRDNLIKDKICSSDSVPSISSINRVIRNIVEISGEFENGNGNFQFMNH-----PQYCWPFKDEVETFHS------------------------------TTFNYNSLQV-SSEFERTHYPDIQTRERLAQIITIPEARIQVWFSNRRAKWRRE 230

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BLAST of af154555_1paired domain transcription factor variant a vs. L. salmonis genes
Match: EMLSAG00000011622 (supercontig:LSalAtl2s:LSalAtl2s803:203385:205122:-1 gene:EMLSAG00000011622 transcript:EMLSAT00000011622 description:"maker-LSalAtl2s803-augustus-gene-1.13")

HSP 1 Score: 196.052 bits (497), Expect = 1.525e-60
Identity = 118/279 (42.29%), Postives = 163/279 (58.42%), Query Frame = 0

Query:    5 FVSGRPLPDTTRHSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNN--------------VVDQIRQYKRECPSIFAWEIRDKLLQDK-VCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQGNDEHSNSGSESHWPSESSNENFHGIHQFPPAGLPLHNEGLSCYGH----AKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRR 264
              SG P     R   VNQLGGVF++GRPLP+  R KI+E+A +G RPC ISR L+VS+GCVSKIL RY ETGSIRP  IGGSK   A NN              + ++IR+Y R+ P IF+W +R+KL++++ +C   + PS++ I+++L++    G             E   SG  S + SE    N H I+         +++   C        KRK +R+RT+F  DQ+E LE+ FEK+ YPD++ RE LA    + E RVQVWFSNRRA+ R+
Sbjct:    3 LFSGYPFQGQGR---VNQLGGVFINGRPLPNHIRLKIIEMAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGIIGGSK---AKNNSPKNHGMQEDVPPFIENKIREYCRDSPGIFSWTVREKLVKEEGLCNKSNAPSIAKISQILKSCPDYGLV-----------EDDKSGEMSSYSSEDLRTN-HSINDILGDLSSKYSDDSDCDTEPGLTLKRKTRRSRTTFXADQLEALEKYFEKTQYPDIFTREELAQSTKLSEARVQVWFSNRRARLRK 263

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BLAST of af154555_1paired domain transcription factor variant a vs. L. salmonis genes
Match: EMLSAG00000012094 (supercontig:LSalAtl2s:LSalAtl2s866:43827:62377:-1 gene:EMLSAG00000012094 transcript:EMLSAT00000012094 description:"maker-LSalAtl2s866-snap-gene-0.8")

HSP 1 Score: 196.438 bits (498), Expect = 1.381e-59
Identity = 103/177 (58.19%), Postives = 125/177 (70.62%), Query Frame = 0

Query:   16 RHSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNIC--------GRGDSSSGNGWIQGNDEHSNSGSESHWPSESSNENFHGIHQ 184
            RH GVNQLGGVFV+GRPLPD  RQ+IVELAH+G RPCDISR L+VS+GCVSKIL R+YETG+ +   IGGSKP+VAT +VVD I +YK++ P++FAWEIRD+LL + VC  D+VPSVSSINR++RN          G G SS  N   Q  +  S   S    PS S N    G+HQ
Sbjct:   61 RHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRFYETGNFKAGVIGGSKPKVATPHVVDAISKYKKDNPTMFAWEIRDRLLSEGVCNQDNVPSVSSINRIVRNKAAERAKVNYGHGSSSQHNLHQQSMNTLSTDSSILQRPSYSIN-GILGLHQ 236

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BLAST of af154555_1paired domain transcription factor variant a vs. L. salmonis genes
Match: EMLSAG00000003791 (supercontig:LSalAtl2s:LSalAtl2s205:188647:199998:1 gene:EMLSAG00000003791 transcript:EMLSAT00000003791 description:"maker-LSalAtl2s205-snap-gene-2.9")

HSP 1 Score: 172.17 bits (435), Expect = 4.181e-52
Identity = 88/141 (62.41%), Postives = 106/141 (75.18%), Query Frame = 0

Query:   12 PDTTRHSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGN 152
            P   ++  VNQLGG+FV+GRPLP+  R +I+ELA  G RPCDISR L+VS+GCVSKIL RY ETGSI P AIGGSKPRV T  VV+ I+  K++ P IFAWEIRDKLL D VC   +VPSVSSI+R+LRN  G  +  SG+
Sbjct:    3 PQINQYGEVNQLGGMFVNGRPLPNHIRVRIIELAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPKVVNFIKDLKQKDPGIFAWEIRDKLLSDGVCDKYNVPSVSSISRILRNKIGTLNHLSGH 143

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BLAST of af154555_1paired domain transcription factor variant a vs. L. salmonis genes
Match: EMLSAG00000010203 (supercontig:LSalAtl2s:LSalAtl2s678:269421:282044:1 gene:EMLSAG00000010203 transcript:EMLSAT00000010203 description:"augustus_masked-LSalAtl2s678-processed-gene-2.1")

HSP 1 Score: 167.162 bits (422), Expect = 1.421e-49
Identity = 78/128 (60.94%), Postives = 104/128 (81.25%), Query Frame = 0

Query:   15 TRHSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPR-VATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRN 141
            T  +GVNQLGGVFV+GRPLPD  R++IVELA  G RPCDISR L VS+GCVSKIL R+YETGS++P +IGG++P+ V T ++V +I + K E P +FAWEIRD+L+  ++C  +++PS+SSINR+LRN
Sbjct:    4 TGQAGVNQLGGVFVNGRPLPDYVRRRIVELAMMGVRPCDISRQLLVSHGCVSKILTRFYETGSVKPGSIGGTRPKQVTTPSIVKRILRIKLENPGLFAWEIRDQLISQRLCDPNNIPSISSINRILRN 131

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BLAST of af154555_1paired domain transcription factor variant a vs. L. salmonis genes
Match: EMLSAG00000001149 (supercontig:LSalAtl2s:LSalAtl2s1190:13382:27967:-1 gene:EMLSAG00000001149 transcript:EMLSAT00000001149 description:"maker-LSalAtl2s1190-augustus-gene-0.26")

HSP 1 Score: 159.458 bits (402), Expect = 7.729e-49
Identity = 88/177 (49.72%), Postives = 117/177 (66.10%), Query Frame = 0

Query:    7 SGRPLPDTTRHSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQGND---EHSNSGSES-----HWPSESS 175
            SG P     R   VNQLGGVF++GRPLP+  R KI+E+A +G RPC ISR L+VS+GCVSKIL RY ETGSIRP  IGG+KP++AT  +  ++  YK E P +F+WE+RD+L+++  C  ++VPSVS+I+R+LR   G+ D    NG    +      SN GS S      +PS SS
Sbjct:   16 SGYPFQGQGR---VNQLGGVFINGRPLPNHIRLKIIEMAXAGVRPCIISRQLRVSHGCVSKILNRYQETGSIRPGVIGGTKPKLATPEIEKKVDMYKNENPGVFSWEVRDRLIKEGFCDKNTVPSVSAISRLLR---GKEDYERKNGNSSQDPTPLSQSNLGSSSLQNHGTYPSTSS 186

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BLAST of af154555_1paired domain transcription factor variant a vs. L. salmonis genes
Match: EMLSAG00000007908 (supercontig:LSalAtl2s:LSalAtl2s467:303159:335713:1 gene:EMLSAG00000007908 transcript:EMLSAT00000007908 description:"maker-LSalAtl2s467-snap-gene-3.20")

HSP 1 Score: 165.236 bits (417), Expect = 1.300e-48
Identity = 104/261 (39.85%), Postives = 128/261 (49.04%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQGNDEHSNSGSESHWPSESSNENFHGIHQFPPAGLPLHNEGLSCYGHAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLAKD 277
            HSGVNQLGGV+V+GRPLPD+TRQKI+ELAHSGARPCDISRILQ                                              CPSIFAWEIRD+LL + VC +D+VPS  S      +         G+    G +E ++ G+  H  S   +             L L           KRK QRNRTSF+ +Q+E LE+EFE++HYPD                   VWFSNRRAKWRR+EK+R   +   D
Sbjct:   26 HSGVNQLGGVYVNGRPLPDSTRQKIIELAHSGARPCDISRILQ----------------------------------------------CPSIFAWEIRDRLLSEGVCNNDNVPSQFSSTESTEDKKSTSGGFLGDFGSDGINEATSDGNSEHNSSADEDSQLR---------LRL-----------KRKLQRNRTSFSTEQIEQLEKEFERTHYPD-------------------VWFSNRRAKWRREEKLRNQKREPVD 201

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BLAST of af154555_1paired domain transcription factor variant a vs. L. salmonis genes
Match: EMLSAG00000008682 (supercontig:LSalAtl2s:LSalAtl2s538:211023:212397:-1 gene:EMLSAG00000008682 transcript:EMLSAT00000008682 description:"maker-LSalAtl2s538-augustus-gene-2.10")

HSP 1 Score: 128.642 bits (322), Expect = 8.190e-35
Identity = 86/238 (36.13%), Postives = 120/238 (50.42%), Query Frame = 0

Query:   77 SIRPKA-IGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHD---SVPSVSSINRVLRNICGRGDSSSGNGWIQGNDEHSNS----------GSESHWPSESSNENFHGIHQFP---------PAGLPLHNEGLSC-------------YGHAKR----------KFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKM 268
            + RP   IGGSKP+VAT  VV +I  YKRE P+IFAWEIR+KL+ + VC ++   SV S++ I R           +   G+      +             G+ S  P  S   + HG H+              + L N+ +S              + + +R          +F+R+RTSF  DQ+E LE++FEKSHYPDL  RE L+   ++ E R+QVWFSNRRAKWRR  +M
Sbjct:  139 TTRPSGMIGGSKPKVATPEVVSKIESYKRENPTIFAWEIREKLISEGVCTNNTAPSVSSINRILRNRAAERAAAXFARAAGFPSMYSHYPGLPSPIPPPPPPGTASFVPPPSFLHSLHGDHRSAILLGGHPGCATSISLPNQLISSTRIEQGDGSSPPKFDYDRRSDASSDDERPQFRRSRTSFNQDQLEYLEKQFEKSHYPDLKTREELSDHTNLSEARIQVWFSNRRAKWRRHHRM 376

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BLAST of af154555_1paired domain transcription factor variant a vs. L. salmonis genes
Match: EMLSAG00000008688 (supercontig:LSalAtl2s:LSalAtl2s538:78060:79772:1 gene:EMLSAG00000008688 transcript:EMLSAT00000008688 description:"maker-LSalAtl2s538-snap-gene-0.10")

HSP 1 Score: 119.013 bits (297), Expect = 2.520e-31
Identity = 82/209 (39.23%), Postives = 106/209 (50.72%), Query Frame = 0

Query:   67 KILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRN-----ICGRGDSSSGNGWIQGNDEHSNSGSESHWPSESSNENFHGIHQFPPAGLPLHNEGLSCYGHAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYL--RERLASLISVPETRVQVWFSNRRAKWRRQEKM 268
            +I+  +  TG + P  IGGSKP+VAT  VV +I  YKRE P+IFAWEIR+KL+ D VC + + PSVSSINR+LRN            ++G G I GN       S   W     N  + G          L+  G   +G          TS   D       +   S  P L L  +E L+S+  + E R+QVWFSNRRAKWRR  +M
Sbjct:   61 RIIPEHRPTGRV-PGMIGGSKPKVATPEVVSKIESYKRENPTIFAWEIREKLISDGVCTNSTAPSVSSINRILRNRAAERAAAEFARAAGFGGIYGNGS-----SPYSWNGSPGNPPYSGSFLS-----SLNTSGGLSHG----------TSNGGD-------DLNSSSSPKLELDQKEELSSVTKLSEARIQVWFSNRRAKWRRHHRM 241

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BLAST of af154555_1paired domain transcription factor variant a vs. L. salmonis genes
Match: EMLSAG00000004664 (supercontig:LSalAtl2s:LSalAtl2s242:897246:900136:1 gene:EMLSAG00000004664 transcript:EMLSAT00000004664 description:"maker-LSalAtl2s242-snap-gene-9.16")

HSP 1 Score: 99.7525 bits (247), Expect = 2.900e-24
Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 0

Query:  203 AKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKM 268
            +K+K +RNRT+F   Q+  LER FEKSHYPD+Y RE LA  +++PE RVQVWF NRRAKWRRQEKM
Sbjct:  177 SKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKM 242

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BLAST of af154555_1paired domain transcription factor variant a vs. SwissProt
Match: gi|2495315|sp|P55864.1|PAX6_XENLA (RecName: Full=Paired box protein Pax-6)

HSP 1 Score: 324.324 bits (830), Expect = 6.812e-109
Identity = 166/281 (59.07%), Postives = 198/281 (70.46%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQG----NDEHSNSGSESHW------PSESSNENFHGIHQFPPAGLPLHNEGLSCYG----------HAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLAKD 277
            HSGVNQLGGVFV+GRPLPD+TRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV++I  YKRECPSIFAWEIRD+LL + VC +D++PSVSSINRVLRN+          G        N + +  GS   W      P + + E        P  G+  +   +S  G            KRK QRNRTSF  +Q+E LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EK+R   + A +
Sbjct:    5 HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAHYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASDKQQMGSEGMYDKLRMLNGQTATWGSRPGWYPGTSVPGQPAQEGCQ-----PQEGVGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASN 280

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BLAST of af154555_1paired domain transcription factor variant a vs. SwissProt
Match: gi|129651|sp|P26630.1|PAX6_DANRE (RecName: Full=Paired box protein Pax-6; AltName: Full=Pax[Zf-a])

HSP 1 Score: 324.709 bits (831), Expect = 7.583e-109
Identity = 167/276 (60.51%), Postives = 197/276 (71.38%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQG----NDEHSNSGSESHWPSESS---NENFHGIHQFPPAGLPLHNEGLSCYG----------HAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLA 275
            HSGVNQLGGVFV+GRPLPD+TRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV +I QYKRECPSIFAWEIRD+LL + VC +D++PSVSSINRVLRN+         +G  +     N +    G+   W   +S     N  G  Q    G   +   +S  G            KRK QRNRTSF  +Q+E LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EK+R   + A
Sbjct:   24 HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGGG--ENTNSISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 297

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BLAST of af154555_1paired domain transcription factor variant a vs. SwissProt
Match: gi|3914281|sp|O73917.1|PAX6_ORYLA (RecName: Full=Paired box protein Pax-6)

HSP 1 Score: 324.709 bits (831), Expect = 9.223e-109
Identity = 167/278 (60.07%), Postives = 198/278 (71.22%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQG----NDEHSNSGSESHWPSESS---NENFHGIHQFPPAGLPLHNEGLSCYG----------HAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLAKD 277
            HSGVNQLGGVFV+GRPLPD+TRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV +I QYKRECPSIFAWEIRD+LL + +C +D++PSVSSINRVLRN+         +G        N +    G+   W   +S     N  G  Q   AG   +   +S  G            KRK QRNRTSF  +Q+E LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EK+R   + A +
Sbjct:   24 HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQDGAG--ENTNSISSNGEDSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQANN 299

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BLAST of af154555_1paired domain transcription factor variant a vs. SwissProt
Match: gi|6174889|sp|P26367.2|PAX6_HUMAN (RecName: Full=Paired box protein Pax-6; AltName: Full=Aniridia type II protein; AltName: Full=Oculorhombin >gi|51702790|sp|P63015.1|PAX6_MOUSE RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin)

HSP 1 Score: 322.013 bits (824), Expect = 5.441e-108
Identity = 166/278 (59.71%), Postives = 197/278 (70.86%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQG----NDEHSNSGSESHWPSESS---NENFHGIHQFPPAGLPLHNEGLSCYG----------HAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLAKD 277
            HSGVNQLGGVFV+GRPLPD+TRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV +I QYKRECPSIFAWEIRD+LL + VC +D++PSVSSINRVLRN+         +G        N +  + G+   W   +S        G  Q    G   +   +S  G            KRK QRNRTSF  +Q+E LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EK+R   + A +
Sbjct:    5 HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGG--ENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASN 280

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BLAST of af154555_1paired domain transcription factor variant a vs. SwissProt
Match: gi|119390857|sp|Q1LZF1.1|PAX6_BOVIN (RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin)

HSP 1 Score: 322.013 bits (824), Expect = 6.132e-108
Identity = 166/278 (59.71%), Postives = 197/278 (70.86%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQG----NDEHSNSGSESHWPSESS---NENFHGIHQFPPAGLPLHNEGLSCYG----------HAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLAKD 277
            HSGVNQLGGVFV+GRPLPD+TRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV +I QYKRECPSIFAWEIRD+LL + VC +D++PSVSSINRVLRN+         +G        N +  + G+   W   +S        G  Q    G   +   +S  G            KRK QRNRTSF  +Q+E LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EK+R   + A +
Sbjct:    5 HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGG--ENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASN 280

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BLAST of af154555_1paired domain transcription factor variant a vs. SwissProt
Match: gi|51704214|sp|P63016.1|PAX6_RAT (RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin)

HSP 1 Score: 322.013 bits (824), Expect = 6.336e-108
Identity = 166/278 (59.71%), Postives = 197/278 (70.86%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQG----NDEHSNSGSESHWPSESS---NENFHGIHQFPPAGLPLHNEGLSCYG----------HAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLAKD 277
            HSGVNQLGGVFV+GRPLPD+TRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV +I QYKRECPSIFAWEIRD+LL + VC +D++PSVSSINRVLRN+         +G        N +  + G+   W   +S        G  Q    G   +   +S  G            KRK QRNRTSF  +Q+E LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EK+R   + A +
Sbjct:    5 HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQ--EGQGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASN 280

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BLAST of af154555_1paired domain transcription factor variant a vs. SwissProt
Match: gi|1352720|sp|P47238.1|PAX6_COTJA (RecName: Full=Paired box protein Pax-6; AltName: Full=Pax-QNR)

HSP 1 Score: 321.242 bits (822), Expect = 9.250e-108
Identity = 167/281 (59.43%), Postives = 196/281 (69.75%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQG----NDEHSNSGSESHWPSESSNENFHGIHQFPPAGLPLHNEG------LSCYG----------HAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLAKD 277
            HSGVNQLGGVFV+GRPLPD+TRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV +I QYKRECPSIFAWEIRD+LL + VC +D++PSVSSINRVLRN+         +G        N +    G+   W   +S        Q    G P    G      +S  G            KRK QRNRTSF  +Q+E LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EK+R   + A +
Sbjct:    5 HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPG-----QPAQDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASN 280

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BLAST of af154555_1paired domain transcription factor variant a vs. SwissProt
Match: gi|60416408|sp|P24610.2|PAX3_MOUSE (RecName: Full=Paired box protein Pax-3)

HSP 1 Score: 248.054 bits (632), Expect = 2.652e-78
Identity = 136/258 (52.71%), Postives = 172/258 (66.67%), Query Frame = 0

Query:   20 VNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPR-VATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQGNDE------HSNSGSESHWPSESSNENFHGIHQFPPAGLPLHNEGLSCYGHAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQ 270
            VNQLGGVF++GRPLP+  R KIVE+AH G RPC ISR L+VS+GCVSKIL RY ETGSIRP AIGGSKP+ V T +V  +I +YKRE P +F+WEIRDKLL+D VC  ++VPSVSSI+R+LR+  G+G+    +   +  +E      HS  G  S   S   ++    I   P   LPL           KRK +R+RT+F  +Q+E LER FE++HYPD+Y RE LA    + E RVQVWFSNRRA+WR+Q    Q
Sbjct:   38 VNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEP--DLPL-----------KRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQ 282

[Close]

BLAST of af154555_1paired domain transcription factor variant a vs. SwissProt
Match: gi|1172022|sp|P23760.2|PAX3_HUMAN (RecName: Full=Paired box protein Pax-3; AltName: Full=HuP2)

HSP 1 Score: 247.669 bits (631), Expect = 3.116e-78
Identity = 136/258 (52.71%), Postives = 172/258 (66.67%), Query Frame = 0

Query:   20 VNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPR-VATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQGNDE------HSNSGSESHWPSESSNENFHGIHQFPPAGLPLHNEGLSCYGHAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQ 270
            VNQLGGVF++GRPLP+  R KIVE+AH G RPC ISR L+VS+GCVSKIL RY ETGSIRP AIGGSKP+ V T +V  +I +YKRE P +F+WEIRDKLL+D VC  ++VPSVSSI+R+LR+  G+G+    +   +  +E      HS  G  S   S   ++    I   P   LPL           KRK +R+RT+F  +Q+E LER FE++HYPD+Y RE LA    + E RVQVWFSNRRA+WR+Q    Q
Sbjct:   38 VNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEP--DLPL-----------KRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQ 282

[Close]

BLAST of af154555_1paired domain transcription factor variant a vs. SwissProt
Match: gi|224493168|sp|Q0IH87.2|PAX3B_XENLA (RecName: Full=Paired box protein Pax-3-B; Short=xPax3-B; AltName: Full=Paired-domain transcription factor Pax3-B)

HSP 1 Score: 246.899 bits (629), Expect = 6.731e-78
Identity = 133/258 (51.55%), Postives = 168/258 (65.12%), Query Frame = 0

Query:   20 VNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQGNDEHSNSGSES-------HWPSESSNENFHGIHQFPPAGLPLHNEGLSCYGHAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQ 270
            VNQLGGVF++GRPLP+  R KIVE+AH G RPC ISR L+VS+GCVSKIL RY ETGSIRP AIGGSKP+V T  V  +I ++KR+ P +F+WEIRDKLL+D VC  ++VPSVSSI+R+LR+  G+GD        +  +E       S         P+   +E    I   P   LPL           KRK +R+RT+F  +Q+E LER FE++HYPD+Y RE LA    + E RVQVWFSNRRA+WR+Q    Q
Sbjct:   38 VNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKVTTPEVEKKIEEFKRDNPGMFSWEIRDKLLKDGVCDRNTVPSVSSISRILRSKFGKGDEEDMELDRKEQEESEKRAKHSIDGILRERAPASPESEEGSDIDSEP--DLPL-----------KRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQ 282

[Close]

BLAST of af154555_1paired domain transcription factor variant a vs. nr
Match: gi|8132383|gb|AAF73271.1|AF154555_1 (paired domain transcription factor variant A [Xenopus laevis] >gi|8132385|gb|AAF73272.1|AF154556_1 paired domain transcription factor variant A [Xenopus laevis])

HSP 1 Score: 328.561 bits (841), Expect = 6.083e-108
Identity = 167/281 (59.43%), Postives = 196/281 (69.75%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGR--------------------GDSSSGNGWIQGNDEHSNSGSESHWPSESSNENFHGIHQFPPAGLPLHNEGLSCYGHAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLAKD 277
            HSGVNQLGGVFV+GRPLPD+TRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV++I QYKRECPSIFAWEIRD+LL D VC +D++PSVSSINRVLRN+                       G   +  GW  G         E   P E   EN + I     +     ++        KRK QRNRTSF  +Q+E LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EK+R   + A +
Sbjct:    5 HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKRECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEKQQMGSDGMYDKLRMLNGQTGTWGARPGWYPGTSVPGQPAQEGCQPQEGGAENTNSI-----SSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASN 280

[Close]

BLAST of af154555_1paired domain transcription factor variant a vs. nr
Match: gi|1069344717|ref|XP_018111899.1| (PREDICTED: paired box 6 L homeolog isoform X3 [Xenopus laevis])

HSP 1 Score: 328.561 bits (841), Expect = 6.268e-108
Identity = 170/291 (58.42%), Postives = 199/291 (68.38%), Query Frame = 0

Query:    7 SGRPLPDTTRHSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGR--------------------GDSSSGNGWIQGNDEHSNSGSESHWPSESSNENFHGIHQFPPAGLPLHNEGLSCYGHAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLAKD 277
            SG  L     HSGVNQLGGVFV+GRPLPD+TRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV++I QYKRECPSIFAWEIRD+LL D VC +D++PSVSSINRVLRN+                       G   +  GW  G         E   P E   EN + I     +     ++        KRK QRNRTSF  +Q+E LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EK+R   + A +
Sbjct:   26 SGSDLDMQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKRECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEKQQMGSDGMYDKLRMLNGQTGTWGARPGWYPGTSVPGQPAQEGCQPQEGGAENTNSI-----SSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASN 311

[Close]

BLAST of af154555_1paired domain transcription factor variant a vs. nr
Match: gi|8132387|gb|AAF73273.1|AF154557_1 (paired domain transcription factor variant B [Xenopus laevis])

HSP 1 Score: 327.405 bits (838), Expect = 6.828e-108
Identity = 167/281 (59.43%), Postives = 196/281 (69.75%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGR--------------------GDSSSGNGWIQGNDEHSNSGSESHWPSESSNENFHGIHQFPPAGLPLHNEGLSCYGHAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLAKD 277
            HSGVNQLGGVFV+GRPLPD+TRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV++I QYKRECPSIFAWEIRD+LL D VC +D++PSVSSINRVLRN+                       G   +  GW  G         E   P E   EN + I     +     ++        KRK QRNRTSF  +Q+E LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EK+R   + A +
Sbjct:    5 HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKRECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEKQQMGSDGMYDKLRMLNGQTGTWGARPGWYPGTSVPGQPAQEGCQPQEGGAENTNSI-----SSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASN 280

[Close]

BLAST of af154555_1paired domain transcription factor variant a vs. nr
Match: gi|8132377|gb|AAF73268.1|AF154552_1 (paired domain transcription factor variant B [Xenopus laevis])

HSP 1 Score: 327.405 bits (838), Expect = 6.978e-108
Identity = 167/281 (59.43%), Postives = 196/281 (69.75%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGR--------------------GDSSSGNGWIQGNDEHSNSGSESHWPSESSNENFHGIHQFPPAGLPLHNEGLSCYGHAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLAKD 277
            HSGVNQLGGVFV+GRPLPD+TRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV++I QYKRECPSIFAWEIRD+LL D VC +D++PSVSSINRVLRN+                       G   +  GW  G         E   P E   EN + I     +     ++        KRK QRNRTSF  +Q+E LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EK+R   + A +
Sbjct:    5 HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKRECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEKQQMGSDGMYDKLRMLNGQTGTWGARPGWYPGTTVPGQPAQEGCQPQEGGAENTNSI-----SSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASN 280

[Close]

BLAST of af154555_1paired domain transcription factor variant a vs. nr
Match: gi|646708363|gb|KDR14710.1| (hypothetical protein L798_11483, partial [Zootermopsis nevadensis])

HSP 1 Score: 328.561 bits (841), Expect = 1.153e-107
Identity = 168/284 (59.15%), Postives = 200/284 (70.42%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQGNDEHSNS-----GSESHWPSESSNENFHGIHQFPPAGLPLHNEGLSCYGH-------------------AKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLAK 276
            HSGVNQLGGVFVSGRPLPD+TRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV +I QYKRECPSIFAWEIRD+LLQ+ VC +D++PSVSSINRVLRN+  + +  + +  +    E           ++ WP  +      G   FP A L          GH                    KRK QRNRTSF N+Q++ LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EKMR   ++ +
Sbjct:    1 HSGVNQLGGVFVSGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATAEVVSKISQYKRECPSIFAWEIRDRLLQEGVCTNDNIPSVSSINRVLRNLASQKEQQTQSPPVPSPAESVYDKLRILNGQAGWPRPNPWYPATGGSPFPTAALQPAASVSPGGGHHVVTGSSAGGPDEDQIRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNRRAKWRREEKMRSQRRVVE 284

[Close]

BLAST of af154555_1paired domain transcription factor variant a vs. nr
Match: gi|1316094150|ref|XP_023188670.1| (paired box protein Pax-6 isoform X7 [Xiphophorus maculatus])

HSP 1 Score: 325.479 bits (833), Expect = 1.419e-107
Identity = 167/278 (60.07%), Postives = 198/278 (71.22%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQG----NDEHSNSGSESHWPSESS---NENFHGIHQFPPAGLPLHNEGLSCYG----------HAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLAKD 277
            HSGVNQLGGVFV+GRPLPD+TRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV +I QYKRECPSIFAWEIRD+LL + +C +D++PSVSSINRVLRN+         +G        N +    G+   W   +S     N  G  Q   AG   +   +S  G            KRK QRNRTSF  +Q+E LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EK+R   + A +
Sbjct:   24 HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQDGAG--ENTNSISSNGEDSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQANN 299

[Close]

BLAST of af154555_1paired domain transcription factor variant a vs. nr
Match: gi|148222787|ref|NP_001079413.1| (paired box 6 L homeolog [Xenopus laevis] >gi|27469846|gb|AAH41712.1| MGC52531 protein [Xenopus laevis] >gi|1050381639|gb|OCT83834.1| hypothetical protein XELAEV_18021973mg [Xenopus laevis])

HSP 1 Score: 328.561 bits (841), Expect = 1.507e-107
Identity = 170/291 (58.42%), Postives = 199/291 (68.38%), Query Frame = 0

Query:    7 SGRPLPDTTRHSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGR--------------------GDSSSGNGWIQGNDEHSNSGSESHWPSESSNENFHGIHQFPPAGLPLHNEGLSCYGHAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLAKD 277
            SG  L     HSGVNQLGGVFV+GRPLPD+TRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV++I QYKRECPSIFAWEIRD+LL D VC +D++PSVSSINRVLRN+                       G   +  GW  G         E   P E   EN + I     +     ++        KRK QRNRTSF  +Q+E LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EK+R   + A +
Sbjct:   26 SGSDLDMQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVNKIAQYKRECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEKQQMGSDGMYDKLRMLNGQTGTWGARPGWYPGTSVPGQPAQEGCQPQEGGAENTNSI-----SSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASN 311

[Close]

BLAST of af154555_1paired domain transcription factor variant a vs. nr
Match: gi|1207990634|ref|XP_021345186.1| (paired box protein Pax-6-like isoform X2 [Mizuhopecten yessoensis])

HSP 1 Score: 328.561 bits (841), Expect = 3.149e-107
Identity = 173/284 (60.92%), Postives = 197/284 (69.37%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQGNDEHSNSGSESHWPSE----SSNENFHGIHQFPPAGLPLHNEGLS-CY------------------GHA--------KRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMR 269
            HSGVNQLGGVFV+GRPLPD+TRQ+IVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVATN+VV +I QYKRECPSIFAWEIRD+LL D  C  D++PSVSSINRVLRN+C       G G +       N  S   WP      +SN +  G+   PPA  P H      C                   GH         KRK QRNRTSF   Q+E LE+EFE++HYPD++ RERLA  I +PE R+QVWFSNRRAKWRR+EK+R
Sbjct:   44 HSGVNQLGGVFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATNDVVGKIAQYKRECPSIFAWEIRDRLLSDGCCNQDNIPSVSSINRVLRNLCTDNQKVMGQGAMYDKLGLLNGQS---WPRPNPWYTSNMSMAGLG--PPAPYPTHQSSTPLCIDKKSNDSSASETNSENQNGHTDEQVRLRLKRKLQRNRTSFTASQIESLEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAKWRREEKLR 322

[Close]

BLAST of af154555_1paired domain transcription factor variant a vs. nr
Match: gi|1211376666|ref|XP_021463575.1| (paired box protein Pax-6 isoform X14 [Oncorhynchus mykiss] >gi|1211376726|ref|XP_021463592.1| paired box protein Pax-6 isoform X13 [Oncorhynchus mykiss])

HSP 1 Score: 325.479 bits (833), Expect = 4.058e-107
Identity = 168/276 (60.87%), Postives = 196/276 (71.01%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQG----NDEHSNSGSESHWPSESS---NENFHGIHQFPPAGLPLHNEGLSCYG----------HAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLA 275
            HSGVNQLGGVFV+GRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV +I QYKRECPSIFAWEIRD+LL + VC +D++PSVSSINRVLRN+         +G        N +    G+   W   +S     N  G    P  G   +   +S  G            KRK QRNRTSF  +Q+E LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EK+R   + A
Sbjct:   24 HSGVNQLGGVFVNGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQ--PQDGAGENTNSISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQA 297

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BLAST of af154555_1paired domain transcription factor variant a vs. nr
Match: gi|1025078048|ref|XP_016339221.1| (PREDICTED: paired box protein Pax-6 isoform X7 [Sinocyclocheilus anshuiensis])

HSP 1 Score: 326.635 bits (836), Expect = 4.217e-107
Identity = 168/278 (60.43%), Postives = 198/278 (71.22%), Query Frame = 0

Query:   17 HSGVNQLGGVFVSGRPLPDTTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPKAIGGSKPRVATNNVVDQIRQYKRECPSIFAWEIRDKLLQDKVCPHDSVPSVSSINRVLRNICGRGDSSSGNGWIQG----NDEHSNSGSESHWPSESS---NENFHGIHQFPPAGLPLHNEGLSCYG----------HAKRKFQRNRTSFANDQVEVLEREFEKSHYPDLYLRERLASLISVPETRVQVWFSNRRAKWRRQEKMRQNSKLAKD 277
            HSGVNQLGGVFV+GRPLPD+TRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRP+AIGGSKPRVAT  VV +I QYKRECPSIFAWEIRD+LL D VC +D++PSVSSINRVLRN+         +G  +     N +    G+   W   +S     N  G  Q    G   +   +S  G            KRK QRNRTSF  +Q+E LE+EFE++HYPD++ RERLA+ I +PE R+QVWFSNRRAKWRR+EK+R   + A +
Sbjct:   24 HSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGGG--ENTNSISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQATN 299

The following BLAST results are available for this feature:

BLAST of af154555_1paired domain transcription factor variant a vs. L. salmonis genes
BLAST of af154555_1paired domain transcription factor variant a vs. SwissProt
BLAST of af154555_1paired domain transcription factor variant a vs. nr

BLAST of af154555_1paired domain transcription factor variant a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000011463	3.898e-93	58.43	supercontig:LSalAtl2s:LSalAtl2s790:313171:331500:-...	[more]
EMLSAG00000011622	1.525e-60	42.29	supercontig:LSalAtl2s:LSalAtl2s803:203385:205122:-...	[more]
EMLSAG00000012094	1.381e-59	58.19	supercontig:LSalAtl2s:LSalAtl2s866:43827:62377:-1 ...	[more]
EMLSAG00000003791	4.181e-52	62.41	supercontig:LSalAtl2s:LSalAtl2s205:188647:199998:1...	[more]
EMLSAG00000010203	1.421e-49	60.94	supercontig:LSalAtl2s:LSalAtl2s678:269421:282044:1...	[more]
EMLSAG00000001149	7.729e-49	49.72	supercontig:LSalAtl2s:LSalAtl2s1190:13382:27967:-1...	[more]
EMLSAG00000007908	1.300e-48	39.85	supercontig:LSalAtl2s:LSalAtl2s467:303159:335713:1...	[more]
EMLSAG00000008682	8.190e-35	36.13	supercontig:LSalAtl2s:LSalAtl2s538:211023:212397:-...	[more]
EMLSAG00000008688	2.520e-31	39.23	supercontig:LSalAtl2s:LSalAtl2s538:78060:79772:1 g...	[more]
EMLSAG00000004664	2.900e-24	66.67	supercontig:LSalAtl2s:LSalAtl2s242:897246:900136:1...	[more]

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BLAST of af154555_1paired domain transcription factor variant a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|2495315\|sp\|P55864.1\|PAX6_XENLA	6.812e-109	59.07	RecName: Full=Paired box protein Pax-6	[more]
gi\|129651\|sp\|P26630.1\|PAX6_DANRE	7.583e-109	60.51	RecName: Full=Paired box protein Pax-6; AltName: F...	[more]
gi\|3914281\|sp\|O73917.1\|PAX6_ORYLA	9.223e-109	60.07	RecName: Full=Paired box protein Pax-6	[more]
gi\|6174889\|sp\|P26367.2\|PAX6_HUMAN	5.441e-108	59.71	RecName: Full=Paired box protein Pax-6; AltName: F...	[more]
gi\|119390857\|sp\|Q1LZF1.1\|PAX6_BOVIN	6.132e-108	59.71	RecName: Full=Paired box protein Pax-6; AltName: F...	[more]
gi\|51704214\|sp\|P63016.1\|PAX6_RAT	6.336e-108	59.71	RecName: Full=Paired box protein Pax-6; AltName: F...	[more]
gi\|1352720\|sp\|P47238.1\|PAX6_COTJA	9.250e-108	59.43	RecName: Full=Paired box protein Pax-6; AltName: F...	[more]
gi\|60416408\|sp\|P24610.2\|PAX3_MOUSE	2.652e-78	52.71	RecName: Full=Paired box protein Pax-3	[more]
gi\|1172022\|sp\|P23760.2\|PAX3_HUMAN	3.116e-78	52.71	RecName: Full=Paired box protein Pax-3; AltName: F...	[more]
gi\|224493168\|sp\|Q0IH87.2\|PAX3B_XENLA	6.731e-78	51.55	RecName: Full=Paired box protein Pax-3-B; Short=xP...	[more]

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BLAST of af154555_1paired domain transcription factor variant a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|8132383\|gb\|AAF73271.1\|AF154555_1	6.083e-108	59.43	paired domain transcription factor variant A [Xeno...	[more]
gi\|1069344717\|ref\|XP_018111899.1\|	6.268e-108	58.42	PREDICTED: paired box 6 L homeolog isoform X3 [Xen...	[more]
gi\|8132387\|gb\|AAF73273.1\|AF154557_1	6.828e-108	59.43	paired domain transcription factor variant B [Xeno...	[more]
gi\|8132377\|gb\|AAF73268.1\|AF154552_1	6.978e-108	59.43	paired domain transcription factor variant B [Xeno...	[more]
gi\|646708363\|gb\|KDR14710.1\|	1.153e-107	59.15	hypothetical protein L798_11483, partial [Zootermo...	[more]
gi\|1316094150\|ref\|XP_023188670.1\|	1.419e-107	60.07	paired box protein Pax-6 isoform X7 [Xiphophorus m...	[more]
gi\|148222787\|ref\|NP_001079413.1\|	1.507e-107	58.42	paired box 6 L homeolog [Xenopus laevis] >gi\|27469...	[more]
gi\|1207990634\|ref\|XP_021345186.1\|	3.149e-107	60.92	paired box protein Pax-6-like isoform X2 [Mizuhope...	[more]
gi\|1211376666\|ref\|XP_021463575.1\|	4.058e-107	60.87	paired box protein Pax-6 isoform X14 [Oncorhynchus...	[more]
gi\|1025078048\|ref\|XP_016339221.1\|	4.217e-107	60.43	PREDICTED: paired box protein Pax-6 isoform X7 [Si...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold182_size278544	supercontig	scaffold182_size278544:9175..15648 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:regulation of transcription
Note	DNA-dependent

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold182_size278544-snap-gene-0.11-mRNA-1	maker-scaffold182_size278544-snap-gene-0.11-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold182_size278544:9175..15648-

gene from alignment at scaffold182_size278544:9175..15648-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold182_size278544-snap-gene-0.11 ID=maker-scaffold182_size278544-snap-gene-0.11|Name=af154555_1paired domain transcription factor variant a|organism=Tigriopus kingsejongensis|type=gene|length=6474bp|location=Sequence derived from alignment at scaffold182_size278544:9175..15648- (Tigriopus kingsejongensis)
GCCATTCCGGAGTCAATCAATTGGGCGGAGTCTTCGTTTCAGGTCGGCCT
CTGCCCGATACAACGCGTCAGAAGATCGTGGAACTGGCTCATTCGGGAGC
CNATTTGCACCCTTTTGTCACAAAATAAATATGCATCCTTTGACAAGGCT
TTGCTTCAGCGCTCACATTTTTCAAATTGTTCAATAATTTCAGAAAATAA
GGTTTCTCCCAATTTGAACTTTTCCGTTACCCACCCGGTAACGTTAGCTG
CAACAATGCAAATCCTGGGCCTGATGAAACAACTGCATTAATTTGCTTTA
CATTGTGCATCCAACCTTTAGGTATATCGGGTTGATGCGGACAAATGCGT
ATCCACGATACCAGTCTTCTCTGCCCTTGAGAGGCTTTTTGGGGTTATGG
ATACCAATACAGTATTATTAATATGGAATTATTATTCTCTGTTCGGTATA
GTTTTGTCAATATTCATGGTCTGGTTAAGTTTCGTTATTATTTATTGAGT
ATTGTTTAATTCTGTACACATCTATTTATACTGTACCGGTATTGGCTAGT
AAATATTTATTGCGCTTACCCATTATTCTATTGTTTTGTTTTGTATAGTT
TGCTGTAATGTTGTTATGTTTCTCTAGTTATCTTTGTTTTTCTAAACTAC
TTAATATGTATACTATATTCTTATAATTTTCCTTAAAACTATTGACTAGC
ATTAGTTTGCTAAGCGTTGACTCCCGGGTGTAAACCTATGTTAAATATGT
AGGGAATAAACGATTACACTGCCCCAAAGGGGCCACAGCCTGACCTGAAC
AAAATATCCACGGCCCCAGGCTTCAGATGTTTCTCCAAATTCCCCTTATG
AATTCCTCTTACCATTAACTGGATTCGATTTCTGGCCGGGTCCTCCCTTC
AATGTGTCAAGATCCTTTGTGGTACACTCACGACTGATATCAGTTATAAT
TGAACCTAGAAATTTCAAGTCCATCCGCTCAGTACCGGAACCTGGTAGTG
CCATCGTCGGACGGAACAATCGGTTCAAAAAACTAACCGAACACACAGCC
TTAGACCTGGATAGAAAATTTAAGATCTCATAGAACAAGCAAAAAGCTTA
CATTTATTGCACAATTATGCCTTAAAGCAATAGGTTTGAATCATACAATC
TCGTTTGATAGCTCCTTGCTCCATTTTAGGCCATTCCGGAGTCAATCAAT
TGGGCGGAGTCTTCGTTTCAGGTCGGCCTCTGCCCGATACAACGCGTCAG
AAGATCGTGGAACTGGCTCATTCGGGAGCCAGACCTTGTGATATATCGCG
AATACTTCAAGTATCCAATGGCTGCGTGTCCAAAATCCTGGGCAGGTAAT
CGCTTCCGTTCACTCTATTGTTAAATATGGAATTATATAATTTACAATGT
ACATTATTTACAAATTATTAGGGTTCACTTTGGATGTTCTATCCTGATGT
TTATCAGAACGTCCCGATTTCAACTAACAGTCCACCTAACACTTCCAGAT
ACTATGAAACTGGGTCCATTCGACCCAAAGCCATCGGTGGTTCCAAGCCC
AGGGTGGCCACTAATAACGTTGTGGATCAAATACGTCAGTATAAAAGAGA
GTGTCCATCGATTTTTGCCTGGGAAATCCGGGATAAATTGCTTCAAGACA
AAGTGTGCCCCCATGACTCCGTACCCAGTGTGAGTTTATAAACTTATACA
CCTTTGAATACCCTTTATATGGTCTGATTGGCTCCTTAGTTTCATTTGTT
TCGTTTAGTTCTTCCATTGGTTCAGCATTTACGTTGTACAATAATCCACA
TTTTTTGCTCTCAAATCACTCCAAATACTTATTTTGTGGGTACCCGGACT
TACCTGAAACAACATCATTTGACCGACCGAGAGTCGGCATAATTGGCAAA
ATAGTTCAGACTTAAAACATATCCATGGTCCCAGAAATGTATTACACCGA
CTGCTTGTTTCATCCACCGGAACAAAACTTAAACATCAATTATTTTGATC
TGTTTCTTATGAGATATATGGTTATTAGTCAACCGTTAGCTAAGTTCAGT
TAGTAGAAAGTCATATTTCTGGGATAGAAAGTATGGAGAAATAGAGGGAA
CTAGGGCATTGGATCCAATGTCCGAGGTCAACTTCTGTCAATCTCGATCA
TTCTTAAAAGCTATATCTGAAAGGAATTTAAAAAACAAAACACTAAATAT
GGCATCCAATACAATCAGACTTTCTGCTTGCTGCGATTTCTCATTCTCGT
ACATAGCCTTGAAGTACTAACCTCCTTGAACCAGATTATATACTTATTAG
GTCACTTTGGAACCTATGTTTATAGGGCAACTAAAGTATATGGGCAGGAT
ATGTCGTTAAGAGCACGGTGAATGCCTCTGTGTATTCCGAGGAAAGCAGC
GTAGCGCAGGGGATCGTTGGTTCGATCCCGGCCTAGCCAAGTTCAGTCAA
TAGACACCTGTATTGTTTGCTTCTCTTTGTGGGATTAAAGTGGGCGTACC
CCTGGGTATTCCTCGAGGGTCAGGTAATCATTCAAGATCAATTTGTCCAC
CAGGCTGACTATGTCTCCTCAGAGATTTCCCTAGATGGGCAGAAATGGCC
GAATCATTCTAAACAAACAAACATACAAAACAAGCCTCTGTGTTTTATTC
ATTATTTCGACCTTGAGATGGTTGTTGTGCTCAATCCTTCCGTTGGACTT
GTAGGATACATTTGGTATGGTTTATCGGCCGAGGCTGAGAATCGTGGAAC
TCCTTACTTGTACAACAGTGTACATACAGTACATAATACCGTAGTTCAGA
GACGATACATATTGCTTCCCTCGTCCGAAACACCTGAAATACTTGCAATA
CTGTACATACCGTATACGTATGTACACCTGGATCTCATTGAACATTAATT
GGTTCATGAATTCTTTCAAATGTGTCCATTCCCTGGGTTTTAGGTGTCTT
CCATCAATCGCGTTCTGCGTAATATATGCGGTCGAGGTGACTCATCTTCA
GGGAATGGTTGGATCCAAGGCAATGATGAACACAGGTAGGCTTACAAATC
GCAGTTTCACATTAAAAAAATCCATGCCATTACTCGAATAATCAAATGAT
TGGTCTTGCGAACTCTACCCCCTACCTCGAACTGCATACCACAGAGCCTG
TCAATCTCATGCGAGAAATCTCTGAAACATATCGTAAACTCGTTTTGTGT
CTGATTTCAGTAACTCTGGATCCGAATCGCATTGGCCTTCAGAATCGAGT
AATGAGAACTTTCACGGGATTCATCAGTTTCCTCCTGCCGGACTACCATT
ACGTAAGTTTAATGGAAACATTATACTACTGTACATGGCGACTGTTTTTC
CTTCGTAACTTTGTATCTTGGTATCTACATGTTTGTATTGTATGTTAAGC
CTTCCCACTAGCTATGCCAAAGAACAACAGTGAAAATGCACAAGCGTTCA
ACGGGTGGTAAAACAGTCATTTTTTATATTAATGACTTCAGGGATAAATC
CGATTCGGTATTAATTTTTTCCTTTACCACTACCTACACTATGTCTATTA
AACCACAAGTATACGGCCATATCGCACTGAACGGTACTTAGAGTGTACTG
CACGTGTTTGATGTGATTGTTCAAAATGGGCGAATCCGTCAGACTCAAAG
TCTTGCATTTGAGATCACTATTCTGCATTAGCCGCGAGGATCTTGTGGCT
GAAATGGCGGATTTCAAAACCTATACAAGCAATAAGCATTTAAAAAAATA
AACAACCCTGTTTTAGCTCAAACACATGTATTATTAGGACATGCGCCTTT
TCAAGCCACACCTTTGTATGCTCATTCCCGCATACTCTACATCCACAGCT
CTTTCGTGAATAACTGATGCCATGACTAGGCAACTTTAAGGCAGTCACCA
GACAATGAGGAAGAGCATCCCTCTGTGTGCGTTCGTCCGAACTAGTGATT
CCATTATCACTAACCGGTATTTGCTAATTGTCGAAGATTTAGTAAATTAT
CGGTATTCGATAATTTTGATGCATCTATAGATCATTTCGAGATTGCGTTA
TTTACAAAAAAAAGCAACCTCTCATTGACATTTTTCAGTTTTCATCTGAT
ATTTTACAAGTTTTTCCATATTCTTCAAGGTTTTTTGAGTTCGATCCTTC
TAAATTTCAGATTGCCCAAATTATTTTTGATCTTTTCGTTATATCTCACT
TTAAGTCCATATTACATGTAGTTTGTTTTTGGGAAGGCTATTTCCGCCCA
AGTTTTCATTTCTCTAATGATTTTTGGCAAATTAACTTCCATGAATTTTA
CAAGTTTCTCAAGATTCTCTATATAAGCAGATTATAGCAAAATAAAATGT
GTTACATATTCATCCATTTTTTTCACGGCTGTCTTAGTCACAATTAGTCA
AGTTTTGGGCCATTTTCCATCGTTTTTTTCGTGGCCTACCTACCAATTAA
ACCATACTCTTTTCGCTGTAAACTTCTTATGTCCTTTTTTTATTTATGAA
CACTGAAGGGAATCTACCCGAGGAGATGCTGAAAGACTCATGATGATGAT
GTGACTGACTAGTTTATTGAGTTACATATATATATAGGTAAATATAGGTC
GTGGAGTCATCTCTCAACAAACACTACATGTAGCCCATTTTTTTACAAAA
TCTTCTGTAGTCGACGAACTATGGCTAATTTTTCTAAGAATTATCGACAA
TCGCCAATATAAATTCGAGATGATTTTGAAAGCACTAGTCCGAACCCCGC
ATTGTGTCAATCTATTAGCCAATGGCTCTTTTGGGAACGAAGTTTTACCC
GAAGTTTACGCCTCATGGAAAAAATCCCCAATTTGAACATCAGCCGCGTA
GTGCGTTAACCAAGTGCACATGTATGTACACTGCACTGTACTACGTACAT
ACTAGGTCTCCATAGCTTTGTGGTCGGCGCTATGTCTTATCAGTTTTCCG
CACGAAGGCTCTTGAGTGACATAAACGAGACGGCAAATGGAAACCCAAAG
AGGAGTGTTGAGTTCTGAGATCCGAGGAGATCCCCTCTCGACTCGCCGTG
GTCCCAGAGAGAGAAAGCGAGAGCGAGCGTCTCGCACGCGTCGAGGAGCC
AAAGTGGACTCCAACGAGGGGAGTTTGGCGCAGATCTTTTCTTCTCCTGC
CTGTTTAGAGTCGCTTTTTGTGCGGCCAGGTTAGAAGCCTTGTCAAAGAG
GTAATGAGGTGTAAACCCAAGGGAGCGTGTCGTATGACCGAATCTCTGGT
TTCCAATACCTTCCTGGGGATAGGGTTGAGGGTGTTAGTTTGGTTGCCAG
GAATAAGAAGCACTAATGCCCAACCTATGTTCTCTTCCAACAGACAATGA
GGGCCTCTCCTGCTACGGCCATGCCAAACGCAAGTTCCAGCGCAATCGAA
CGTCCTTTGCAAATGACCAGGTGGAAGTCCTGGAGCGAGGTGAGTAATAA
CTAGGGGCTGGAAATGAGATTTCCAGCCGAAAAGAATTATTGAGCTATTT
ATTTAGAGGTTTAGAAAAAAGTAAAACAATAGCCCTAAATGTGGCTCACC
GATAAAAAATAGAGCGTATTCAGATCAGTTCCCCGATCATAACCTTTTAT
ACAATTCAAGAATATTTTATTTTTGTGGTACACACTTGAGTGGAATCGTA
ATAAATAGCAATAATGCCTTTTTCCTCTACGTACATGTTAATTACGGTTA
ACTTATCCTGGTTGGCCAGAGAGTAGTATGCAATTGGGAGGAAAAGCAAA
GGAATTCAGAACTACCGTAAACTAGTACTTCCTACCTTTACCCCCATAAC
TCTATCCGCACTGAGCTGAGGGCCGGGGTTCGAACCCTGCGCTTCCAAGT
TCATAGCAAGTGGTGCTGTTGAAGTACTCGTACAACCACTCTTTTTCATC
CCTCGCGGAATTAAATGGTGAAATTGTTCGGACTTCTGGTCATTCCACGA
CGTTACGAGTAAGTTTATAATGCAATATGAATTGGTAGAGCTGGCAGCCA
TTCTCTCGAAAGAGATTACCTCGCTGGAAAGGCCTTCCAACAAAAGCCAA
TCCACTCAATTATCAATGGCTGGAAGCGTAGAAATCAAAGCTTTATACCA
ATTTCTTGACTGAAATCCATTTTGGTCTCGCACTTGCGGATTTGTGAAGA
ATTGGCTTGAAGTATACATCTGTTTGTATTGTTTTCCTAAGACACAGAGT
GTGCACATCTCGTGCAATCACCAAGAACACAATATAAGCTCGGGATGGTG
GATAATCATAACCATTAGCCAGACCGAATAGTGATTACCATCGACTGGTT
CTGGTTGCAGAGTTTGAAAAGTCCCATTACCCGGATCTCTATCTCCGAGA
GCGATTGGCGTCTCTCATTTCTGTGCCCGAAACTAGGGTTCAGGTTTGGT
TCTCCAATCGGCGGGCTAAATGGCGGAGACAAGAGAAAATGAGACAAAAC
TCCAAACTGGCGAAGGATCGCAAA

Synonyms

The feature 'af154555_1paired domain transcription factor variant a' has the following synonyms


Synonym
Tk04802

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