sry-related hmg box c protein, snap_masked-scaffold1132_size60346-processed-gene-0.2 (gene) Tigriopus kingsejongensis

Overview


Name	sry-related hmg box c protein
Unique Name	snap_masked-scaffold1132_size60346-processed-gene-0.2
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of sry-related hmg box c protein vs. L. salmonis genes
Match: EMLSAG00000002096 (supercontig:LSalAtl2s:LSalAtl2s1393:27154:29042:1 gene:EMLSAG00000002096 transcript:EMLSAT00000002096 description:"maker-LSalAtl2s1393-augustus-gene-0.3")

HSP 1 Score: 256.144 bits (653), Expect = 3.870e-82
Identity = 150/273 (54.95%), Postives = 171/273 (62.64%), Query Frame = 0

Query:    1 MISVLNPYRPMAQMKLCHRSSGTFGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPGS---------KTNSPVHRSLVEKKSPVK---RSSPMKLNRSFGGNSWVNSSKVRFSTTNGPLTCVNHERLNLKFTIDSKFKANLAKSSAKLVPVSGFAVDTSKTSPTPSLPNVPTTPDLPHSPSESFYE---------DHHHHH 252
            MISV+NP            +   FGS  VD+NS+TPYTDAT+TKKQP NRIKRPMNAFMVFSHIERKKI+EFQPDIHNAEISKNLGKKWK L+DE K PYIQEAERLRLLH+KEYPDYKYQPRKK   G+         K +S +  S V     +K   +     LN+ FG N+WVNS+ VRFS+    L  VNH+RLNLKFTIDSKFKANL +        +GF VD             P  P  P S   SFYE         D + HH
Sbjct:    2 MISVMNP------------NGTVFGSQLVDKNSSTPYTDATKTKKQPQNRIKRPMNAFMVFSHIERKKIVEFQPDIHNAEISKNLGKKWKELTDEFKIPYIQEAERLRLLHLKEYPDYKYQPRKKACGGAPLNNIGNTKKIDSILGLSTVVGGGGIKPKAKHQKQVLNKRFGSNAWVNSANVRFSSN---LXSVNHDRLNLKFTIDSKFKANLRRG-------AGF-VDIK-----------PIPPGSPTSSDSSFYEEPVYLTPEKDMYQHH 240

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BLAST of sry-related hmg box c protein vs. L. salmonis genes
Match: EMLSAG00000003454 (supercontig:LSalAtl2s:LSalAtl2s1897:25608:26602:1 gene:EMLSAG00000003454 transcript:EMLSAT00000003454 description:"maker-LSalAtl2s1897-snap-gene-0.3")

HSP 1 Score: 183.341 bits (464), Expect = 4.363e-56
Identity = 100/187 (53.48%), Postives = 124/187 (66.31%), Query Frame = 0

Query:   24 FGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSPVHRSLVEKKSPVK---RSSPMKLNRSFGGNSWVNSSKVRFSTTNGPLTCVNHERLNLKFTIDSKFKANLAKSSAK 207
            FGS ++D NS+TPYTDATQTKK P N IKRPMNAFMV+S +ER+KIIE QPDIHNAEISKNLGKKWKLLS + ++P+IQEAERLR+LHM+EYPDYKY+PRKKN  GS  +S  + S   K   +K   R   +++  S+           RFS+T                  D K+KA L KS+ +
Sbjct:   13 FGSQTIDTNSSTPYTDATQTKKNPANHIKRPMNAFMVWSQLERRKIIEIQPDIHNAEISKNLGKKWKLLSQDEREPFIQEAERLRVLHMQEYPDYKYRPRKKNN-GSAASSTNNSSNSTKSQIIKDYPRXKSLRITTSYSIRDETRLKGSRFSST------------------DVKYKAELRKSATR 180

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BLAST of sry-related hmg box c protein vs. L. salmonis genes
Match: EMLSAG00000002070 (supercontig:LSalAtl2s:LSalAtl2s1384:4574:6843:1 gene:EMLSAG00000002070 transcript:EMLSAT00000002070 description:"maker-LSalAtl2s1384-snap-gene-0.5")

HSP 1 Score: 174.481 bits (441), Expect = 4.828e-52
Identity = 81/102 (79.41%), Postives = 91/102 (89.22%), Query Frame = 0

Query:   24 FGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKK 125
            F SL VD NS TPY+DATQTKK P N IKRPMNAFMVFSHIERKKIIEFQPDIHNAE+SK LG++WK LS + K+P+IQEAERLRLLHM+EYPDYKY+P+KK
Sbjct:   10 FPSLCVDINSPTPYSDATQTKKHPPNHIKRPMNAFMVFSHIERKKIIEFQPDIHNAEVSKALGRRWKELSKDEKEPFIQEAERLRLLHMREYPDYKYRPKKK 111

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BLAST of sry-related hmg box c protein vs. L. salmonis genes
Match: EMLSAG00000012988 (supercontig:LSalAtl2s:LSalAtl2s98:416526:433921:-1 gene:EMLSAG00000012988 transcript:EMLSAT00000012988 description:"augustus_masked-LSalAtl2s98-processed-gene-4.0")

HSP 1 Score: 160.614 bits (405), Expect = 2.085e-45
Identity = 72/107 (67.29%), Postives = 86/107 (80.37%), Query Frame = 0

Query:   24 FGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPGS 130
            FGS+ V   S TPY+DATQTKK   N IKRPMNAFMV+S +ER+KIIE  P+ HNAEISK LG++WKLL  + +QPYI EAERLR+LH +EYPDYKY+PRK+N  GS
Sbjct:   49 FGSMKVKSESKTPYSDATQTKKHKTNHIKRPMNAFMVWSQLERRKIIEVTPEKHNAEISKELGRRWKLLVQKDRQPYIDEAERLRVLHNQEYPDYKYKPRKRNNSGS 155

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BLAST of sry-related hmg box c protein vs. L. salmonis genes
Match: EMLSAG00000002555 (supercontig:LSalAtl2s:LSalAtl2s1508:39766:41005:-1 gene:EMLSAG00000002555 transcript:EMLSAT00000002555 description:"maker-LSalAtl2s1508-augustus-gene-0.2")

HSP 1 Score: 159.844 bits (403), Expect = 7.728e-45
Identity = 76/107 (71.03%), Postives = 89/107 (83.18%), Query Frame = 0

Query:   21 SGTFGSLSVDQNSTTPYTDAT--QTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKK 125
            S  FGSL VD NS+TPYTDAT  + KK   NRIKRPMNAFMV+S IER+KIIE QPDIHNAEISKNLGKKWK LS + ++P+I+ AE+L+  HM+EYPDYKY+PRKK
Sbjct:   34 SIVFGSLYVDTNSSTPYTDATKVRAKKHTANRIKRPMNAFMVWSQIERRKIIEIQPDIHNAEISKNLGKKWKSLSLQEREPFIRHAEKLKRYHMQEYPDYKYRPRKK 140

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BLAST of sry-related hmg box c protein vs. L. salmonis genes
Match: EMLSAG00000011293 (supercontig:LSalAtl2s:LSalAtl2s776:116786:181454:1 gene:EMLSAG00000011293 transcript:EMLSAT00000011293 description:"maker-LSalAtl2s776-augustus-gene-1.7")

HSP 1 Score: 157.532 bits (397), Expect = 1.777e-44
Identity = 73/114 (64.04%), Postives = 93/114 (81.58%), Query Frame = 0

Query:   23 TFGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKK--NGPGSKTNS 134
             + SL ++ +S TPY+DATQTKK  VN IKRPMNAFMV+S +ER+KIIE  PD HNA+ISK LG++WK L++  + PY++EAERLRLLH+KEYPDYKY+PRKK  NGP + T+S
Sbjct:   48 VYRSLRINIDSKTPYSDATQTKKHRVNHIKRPMNAFMVWSQLERRKIIEVTPDKHNAQISKELGQRWKALNEVERHPYVEEAERLRLLHIKEYPDYKYKPRKKVLNGPNASTSS 161

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BLAST of sry-related hmg box c protein vs. L. salmonis genes
Match: EMLSAG00000012986 (supercontig:LSalAtl2s:LSalAtl2s98:312691:316904:-1 gene:EMLSAG00000012986 transcript:EMLSAT00000012986 description:"maker-LSalAtl2s98-snap-gene-3.10")

HSP 1 Score: 157.147 bits (396), Expect = 2.338e-44
Identity = 72/110 (65.45%), Postives = 92/110 (83.64%), Query Frame = 0

Query:   26 SLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSP 135
            S+ +   S TPY+DATQTKKQP N IKRPMNAFMV+S +ER+KIIE  P+ HNAEISK LG++WK+L++E ++PYIQEAERLR+LH+KEYP+YKY+PRKK+   S + SP
Sbjct:   48 SMRISTESKTPYSDATQTKKQPPNHIKRPMNAFMVWSQLERRKIIEVTPEKHNAEISKELGRRWKMLNEEDQKPYIQEAERLRVLHLKEYPNYKYRPRKKSLKDSGSLSP 157

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BLAST of sry-related hmg box c protein vs. L. salmonis genes
Match: EMLSAG00000005555 (supercontig:LSalAtl2s:LSalAtl2s298:363976:367504:1 gene:EMLSAG00000005555 transcript:EMLSAT00000005555 description:"maker-LSalAtl2s298-snap-gene-3.3")

HSP 1 Score: 139.043 bits (349), Expect = 8.338e-37
Identity = 62/90 (68.89%), Postives = 73/90 (81.11%), Query Frame = 0

Query:   40 ATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPG 129
             + TKK  VN IKRPMNAFMV+S +ER+KIIE  PD HNAEISK LG++WKLL +E +QPYI EAERLR+LH +EYPDYKY+PRKK   G
Sbjct:   15 GSSTKKHRVNHIKRPMNAFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLLGEEERQPYIDEAERLRVLHQREYPDYKYKPRKKVKGG 104

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BLAST of sry-related hmg box c protein vs. L. salmonis genes
Match: EMLSAG00000006096 (supercontig:LSalAtl2s:LSalAtl2s3300:642:5231:-1 gene:EMLSAG00000006096 transcript:EMLSAT00000006096 description:"augustus_masked-LSalAtl2s3300-processed-gene-0.0")

HSP 1 Score: 114.005 bits (284), Expect = 1.265e-28
Identity = 54/129 (41.86%), Postives = 82/129 (63.57%), Query Frame = 0

Query:   20 SSGTFGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSPVHRSLVEKKSPVK 148
            S G F S + D+ +          K++   RI+RPMNAFMV++ +ERK++    PD+HNA++S+ LG KWK L+   + P +QEAERLRL+HM+++P YKY+PR+K    SK + P  R  +   +P +
Sbjct:   15 SIGDFSSRAEDREALN--------KRKRNERIRRPMNAFMVWAKVERKRLAXENPDLHNADLSRMLGTKWKSLTPAERAPSVQEAERLRLIHMQDFPHYKYRPRRKKKERSKGDKPSERQYLSVDTPER 135

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BLAST of sry-related hmg box c protein vs. L. salmonis genes
Match: EMLSAG00000012125 (supercontig:LSalAtl2s:LSalAtl2s86:936340:938417:1 gene:EMLSAG00000012125 transcript:EMLSAT00000012125 description:"maker-LSalAtl2s86-snap-gene-9.9")

HSP 1 Score: 112.849 bits (281), Expect = 1.546e-27
Identity = 47/77 (61.04%), Postives = 64/77 (83.12%), Query Frame = 0

Query:   49 NRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKK 125
            +R+KRPMNAFMV+S  +R+K+ +  P +HN+EISK LG +WK LS+  K+P+I EA+RLR LHMKE+PDYKY+PR+K
Sbjct:  101 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGTEWKTLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRK 177

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BLAST of sry-related hmg box c protein vs. SwissProt
Match: gi|108935907|sp|P40656.3|SOX14_DROME (RecName: Full=Putative transcription factor SOX-14)

HSP 1 Score: 150.599 bits (379), Expect = 2.951e-38
Identity = 73/113 (64.60%), Postives = 88/113 (77.88%), Query Frame = 0

Query:   20 SSGTFGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKN--GPGS 130
            SS  FGS  V  NS+TPY+DAT+TKK     IKRPMNAFMV+S +ER+KI E  PD+HNAEISK LG++W+LLS + KQPYI EAE+LR LHM EYP+YKY+P+KK    PGS
Sbjct:  156 SSLVFGSARVPVNSSTPYSDATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYIIEAEKLRKLHMIEYPNYKYRPQKKQTRSPGS 268

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BLAST of sry-related hmg box c protein vs. SwissProt
Match: gi|341942057|sp|Q06831.2|SOX4_MOUSE (RecName: Full=Transcription factor SOX-4)

HSP 1 Score: 134.42 bits (337), Expect = 1.199e-33
Identity = 69/114 (60.53%), Postives = 80/114 (70.18%), Query Frame = 0

Query:   12 AQMKLCHRSSGTFGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKK 125
            A ++L   SS T GS +    ST    D     K P   IKRPMNAFMV+S IER+KI+E  PD+HNAEISK LGK+WKLL D  K P+IQEAERLRL HM +YPDYKY+PRKK
Sbjct:   24 AGLELGIASSPTPGSTA----STGGKADDPSWCKTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRLKHMADYPDYKYRPRKK 133

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BLAST of sry-related hmg box c protein vs. SwissProt
Match: gi|548952|sp|Q06945.1|SOX4_HUMAN (RecName: Full=Transcription factor SOX-4)

HSP 1 Score: 130.954 bits (328), Expect = 3.048e-32
Identity = 68/114 (59.65%), Postives = 80/114 (70.18%), Query Frame = 0

Query:   12 AQMKLCHRSSGTFGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKK 125
            A ++L   SS T GS +    ST    D     K P   IKRPMNAFMV+S IER+KI+E  PD+HNAEISK LGK+WKLL D  K P+I+EAERLRL HM +YPDYKY+PRKK
Sbjct:   24 AGLELGIASSPTPGSTA----STGGKADDPSWCKTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLKHMADYPDYKYRPRKK 133

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BLAST of sry-related hmg box c protein vs. SwissProt
Match: gi|82181392|sp|Q66JF1.1|SOX11_XENTR (RecName: Full=Transcription factor Sox-11)

HSP 1 Score: 129.413 bits (324), Expect = 3.804e-32
Identity = 63/110 (57.27%), Postives = 78/110 (70.91%), Query Frame = 0

Query:   45 KQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSPVHRSLVEKKSPVKRSSPMK 154
            K     IKRPMNAFMV+S IER+KI+E  PD+HNAEISK LGK+WK+L+D  K P+I+EAERLRL HM +YPDYKY+PRKK       + P   +   +KSP  RS+  K
Sbjct:   42 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKHMADYPDYKYRPRKKPKVDPSASKPASLAQSPEKSPKSRSAGKK 151

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BLAST of sry-related hmg box c protein vs. SwissProt
Match: gi|226709487|sp|P40650.2|SX11B_XENLA (RecName: Full=Transcription factor Sox-11-B; AltName: Full=Transcription factor Sox-13; Short=xSox-13; AltName: Full=XLS13B)

HSP 1 Score: 126.716 bits (317), Expect = 2.768e-31
Identity = 69/124 (55.65%), Postives = 85/124 (68.55%), Query Frame = 0

Query:   45 KQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSPVHRSLVE--KKSPVKRSSPM---KLNRSFGGNS 163
            K     IKRPMNAFMV+S IER+KI+E  PD+HNAEISK LGK+WK+L+D  K P+I+EAERLRL HM +YPDYKY+PRKK  P     +    +L +  +KSP  RS+     KL  S  GNS
Sbjct:   39 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKHMADYPDYKYRPRKK--PKVDPTASKSPTLAQSPEKSPKSRSAGKKCPKLKPSHSGNS 160

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BLAST of sry-related hmg box c protein vs. SwissProt
Match: gi|226709486|sp|Q91731.2|SX11A_XENLA (RecName: Full=Transcription factor Sox-11-A; Short=xSox-11; AltName: Full=XLS13A)

HSP 1 Score: 126.716 bits (317), Expect = 3.173e-31
Identity = 66/118 (55.93%), Postives = 81/118 (68.64%), Query Frame = 0

Query:   45 KQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKK--------NGPGSKTNSPVHRSLVEKKSPVKRSSPMK 154
            K     IKRPMNAFMV+S IER+KI+E  PD+HNAEISK LGK+WK+L+D  K P+I+EAERLRL HM +YPDYKY+PRKK        + P + T SP       +KSP  RS+  K
Sbjct:   41 KTATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKHMADYPDYKYRPRKKPKVDPSASSKPPALTQSP-------EKSPKSRSAGRK 151

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BLAST of sry-related hmg box c protein vs. SwissProt
Match: gi|108927565|sp|P47792.2|SX19A_DANRE (RecName: Full=Transcription factor Sox-19a)

HSP 1 Score: 123.635 bits (309), Expect = 8.306e-31
Identity = 56/110 (50.91%), Postives = 79/110 (71.82%), Query Frame = 0

Query:   28 SVDQNSTTPYTDATQTKKQ-PVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSPV 136
             V   S  P  ++ Q +   P++++KRPMNAFMV+S  +R+K+ +  P +HN+EISK LG +WKLL+D  K+P+I EA+RLR LHMKEYPDYKY+PR+K  P  K ++P 
Sbjct:   29 GVTHGSAKPAVNSQQQQSSDPMDKVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYPDYKYKPRRKTKPVLKKDNPA 138

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BLAST of sry-related hmg box c protein vs. SwissProt
Match: gi|81885896|sp|Q7M6Y2.1|SOX11_MOUSE (RecName: Full=Transcription factor SOX-11)

HSP 1 Score: 125.176 bits (313), Expect = 1.150e-30
Identity = 55/75 (73.33%), Postives = 65/75 (86.67%), Query Frame = 0

Query:   51 IKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKK 125
            IKRPMNAFMV+S IER+KI+E  PD+HNAEISK LGK+WK+L D  K P+I+EAERLRL HM +YPDYKY+PRKK
Sbjct:   49 IKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPRKK 123

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BLAST of sry-related hmg box c protein vs. SwissProt
Match: gi|109894872|sp|P0C1G9.1|SOX11_RAT (RecName: Full=Transcription factor SOX-11)

HSP 1 Score: 125.176 bits (313), Expect = 1.334e-30
Identity = 55/75 (73.33%), Postives = 65/75 (86.67%), Query Frame = 0

Query:   51 IKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKK 125
            IKRPMNAFMV+S IER+KI+E  PD+HNAEISK LGK+WK+L D  K P+I+EAERLRL HM +YPDYKY+PRKK
Sbjct:   49 IKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPRKK 123

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BLAST of sry-related hmg box c protein vs. SwissProt
Match: gi|1351141|sp|P48435.1|SOX11_CHICK (RecName: Full=Transcription factor SOX-11; Short=cSox11)

HSP 1 Score: 124.79 bits (312), Expect = 1.880e-30
Identity = 55/75 (73.33%), Postives = 65/75 (86.67%), Query Frame = 0

Query:   51 IKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKK 125
            IKRPMNAFMV+S IER+KI+E  PD+HNAEISK LGK+WK+L D  K P+I+EAERLRL HM +YPDYKY+PRKK
Sbjct:   49 IKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPRKK 123

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BLAST of sry-related hmg box c protein vs. nr
Match: gi|926641776|ref|XP_013787035.1| (transcription factor Sox-11-like [Limulus polyphemus])

HSP 1 Score: 199.519 bits (506), Expect = 3.348e-56
Identity = 121/242 (50.00%), Postives = 151/242 (62.40%), Query Frame = 0

Query:   18 HRSSGTFGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSPVHRSLVEKKSPVKRSSPMKLNRSFGGNSWVNSSKVRF-------STTNGPLTCVNHERLNLKFTIDSKFKANLAKSSAKLVPVSGFAVDTSKTSPTPSLPNVPT--TPDLPHSPSESFYEDHHH 250
             R    FGS+ V  NS TPYTDAT+ KK   N IKRPMNAFMV+S IER+KI E QPD+HNAEISK LGK+WKLL+DE +QP+I+EAERLRLLHM+EYPDYKY+PRKK  P SK+         EKKSPVK  S    N   GG+      + RF       + T    + +NH RL LK TID KFK ++ +S  K VP+S      ++ +P   +P  P+   P  P S + S YED+ +
Sbjct:   26 ERGEIMFGSMKVLSNSRTPYTDATRCKKA-ANHIKRPMNAFMVWSQIERRKICEQQPDMHNAEISKRLGKRWKLLTDEERQPFIEEAERLRLLHMQEYPDYKYRPRKKVKPTSKS---------EKKSPVKHKS----NGDKGGS---KPKQPRFHLSSPTVNQTTVSTSGINHNRLKLKLTIDKKFKESIRQS--KQVPLS-----VNQFTPPAKVPCSPSEDQPSSPESTNVSLYEDNMY 243

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BLAST of sry-related hmg box c protein vs. nr
Match: gi|926648957|ref|XP_013790915.1| (transcription factor Sox-11-like [Limulus polyphemus])

HSP 1 Score: 196.438 bits (498), Expect = 5.372e-55
Identity = 119/231 (51.52%), Postives = 144/231 (62.34%), Query Frame = 0

Query:   24 FGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSPVHRSLVEKKSPVKRSSPMKLNRSFGGNS-----WVNSSKVRFSTTNGPLTCVNHERLNLKFTIDSKFKANLAKSSAKLVPVSGFAVDTSKTSPTPSLPNVPTT--PDLPHSPSESFYED 247
            FGSL V  NS TPYTDATQ KK   N IKRPMNAFMV+S IER+KI E QPD HNAEISK LGK+WKLL+D+ +QP+I+EAERLR+LHM+EYP YKY+PRKK    SK          EKK+P+K  S     R  GG+      +  SS   FS T  P   +NH RL LK TID KFK ++  S  K VP+S      ++ +P   +P +P    P  P S + S YED
Sbjct:   39 FGSLKVANNSRTPYTDATQCKKA-ANHIKRPMNAFMVWSQIERRKICEQQPDTHNAEISKQLGKRWKLLTDDERQPFIEEAERLRILHMQEYPGYKYRPRKKVKQTSKP---------EKKNPMKHKSA----RDKGGSKPKQHRFQLSSSTVFSATPVPNVGINHNRLKLKLTIDKKFKDSIRHS--KQVPLS-----VNQLTPPAKVPCLPVEDDPSSPESTNVSLYED 248

[Close]

BLAST of sry-related hmg box c protein vs. nr
Match: gi|926645818|ref|XP_013789229.1| (transcription factor Sox-11-like [Limulus polyphemus])

HSP 1 Score: 193.741 bits (491), Expect = 3.776e-54
Identity = 107/228 (46.93%), Postives = 139/228 (60.96%), Query Frame = 0

Query:   23 TFGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKK---NGPGSKTNSPVHRSLVEKKSPVKRSSPMKLNRSFGGNSWVNSSKVRFSTTNGPLTCVNHERLNLKFTIDSKFKANLAKSSAKLVPVSGFAVDTSKTSPTPSLPNVPTTPDLPHSPSESFYED 247
             FGS++VD NS+TPYTDATQ KK   NR+KRPMNAFMV+S IER+KI E QPD+HNAEISK LGK+WKLL++  +QP+IQEAERLR+LHM+EYPDYKY+PRKK    G   +  S     +   K  +K   P+K +R   G+          ++   P+  VN+ RL LK TID KFK ++  +S                 P   +P  P+ P  P S + S Y+D
Sbjct:   35 VFGSMTVDVNSSTPYTDATQCKK-ATNRVKRPMNAFMVWSQIERRKICEQQPDMHNAEISKQLGKRWKLLTENERQPFIQEAERLRVLHMQEYPDYKYRPRKKAKQTGVKQEKKSAAKHKVYSGKEGLK---PVKHSRLVCGD----------ASPRAPVAGVNYNRLKLKLTIDRKFKESIRPTS---------------LHPAGKVPCSPSEPASPESTNVSLYDD 233

[Close]

BLAST of sry-related hmg box c protein vs. nr
Match: gi|1238830387|ref|XP_013775452.2| (transcription factor Sox-11-A-like [Limulus polyphemus])

HSP 1 Score: 193.741 bits (491), Expect = 4.307e-54
Identity = 114/239 (47.70%), Postives = 145/239 (60.67%), Query Frame = 0

Query:   18 HRSSGTFGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSPVHRSLVEKKSPVKRSSPMKLNRSFGGNSWVNSSKVRFSTTNGPLTC-------VNHERLNLKFTIDSKFKANLAKSSAKLVPVSGFAVDTSKTSPTPSLPNVPT--TPDLPHSPSESFYED 247
            H+SS  FGS+ +D NS+TPYTDATQ KK P N IKRPMNAFMV+S IER+KI E QPD+HNAEISK LGK+WKLL+++ +QP+IQEAERLR+LH++EYPDYKY+PRKK  P          ++ EKKSP K     K++    G   V   +V+    NG L         VNH RL LK TID  FK +         PV   +    +   +  +P  P+   P  P S + S Y+D
Sbjct:   29 HQSSPMFGSMMIDTNSSTPYTDATQCKK-PANHIKRPMNAFMVWSQIERRKICEQQPDLHNAEISKQLGKRWKLLTEKERQPFIQEAERLRILHLQEYPDYKYRPRKKAKP---------TTVQEKKSPTKH----KISCDKKGLKSVKQPRVQ---QNGQLIATPVIFSNVNHNRLKLKLTIDKNFKESFR-------PVKQESRQIGQFKSSGKVPGSPSEDEPASPESANISLYDD 243

[Close]

BLAST of sry-related hmg box c protein vs. nr
Match: gi|1325277714|ref|XP_023323496.1| (transcription factor SOX-4-like [Eurytemora affinis])

HSP 1 Score: 191.815 bits (486), Expect = 2.136e-53
Identity = 123/262 (46.95%), Postives = 165/262 (62.98%), Query Frame = 0

Query:    1 MISVLNPYRPMAQMKLCHRSSGTFGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKK----NGPGSKTNSPVHRSLVEKKSPVKRSSPMKLNRSFGGNSWVNSSKVRFSTTNGPLTCVNHERLNLKFTIDSKFKANLAKSSAKLVPVSGFAVD------TSKTSPTPSLPNVPTTPDLPHSP-SESFYEDHHHH 251
            M + L+ YR + + +        FGS  +D+ S TPY+DAT+T     NRIKRPMNAFMVFSH +R+KI+E QPDIHNAEISK LG++WK + D  K PYIQEAE+LR LH++EYP YKYQP+KK    N P S   S +  ++++   P +  +  +LN  FG NSWVN  ++  ST   P   +N   L LKFTIDSKFKA +AK+  +L+P+S    +      T   + +   P VP TP+LP SP S SFY++ H +
Sbjct:    1 MCTSLSGYRALTESR--------FGSFKIDKTSPTPYSDATKTCHDS-NRIKRPMNAFMVFSHYQRRKIVENQPDIHNAEISKRLGREWKEMMDYEKLPYIQEAEKLRTLHLQEYPGYKYQPKKKPKASNSPKSFLESQMKSAVIK---PTRPGTVFRLNNMFGSNSWVN-QRIPLSTRTQP---INTSNLKLKFTIDSKFKAKMAKNQNRLIPMSRLVSEPSSTCSTPSPTSSTPSPGVPRTPELPASPDSTSFYDELHKN 246

[Close]

BLAST of sry-related hmg box c protein vs. nr
Match: gi|926651966|ref|XP_013792539.1| (transcription factor SOX-4-like [Limulus polyphemus])

HSP 1 Score: 187.193 bits (474), Expect = 1.225e-51
Identity = 94/181 (51.93%), Postives = 124/181 (68.51%), Query Frame = 0

Query:   24 FGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSPVHRSLVEKKSPVKRSSPMKLNRSFGGNSWVNSSKVRFS--TTNGPLTCVNHERLNLKFTIDSKFKANLA 202
            FGS++VD NS TPYTDATQ KK   +R+KRPMNAFMV+S IER+KI E QPD+HNAEISK LGK+WKLL++  +QP+IQEAERLR+LHM+EYPDYKY+PRKK  P          ++ ++K P  +       + F     V  S++ +   + + P+  VN+ RL LK TID KFK ++ 
Sbjct:   27 FGSMTVDVNSNTPYTDATQCKKV-TSRVKRPMNAFMVWSQIERRKICEQQPDMHNAEISKQLGKRWKLLTESERQPFIQEAERLRVLHMQEYPDYKYRPRKKAKP---------TTVKQEKKPATKHKVTNCKKGFKP---VKQSRIHYGVPSVSAPVGDVNYNRLKLKLTIDKKFKESMG 194

[Close]

BLAST of sry-related hmg box c protein vs. nr
Match: gi|1228000315|ref|XP_021932033.1| (transcription factor sox-2-like isoform X1 [Zootermopsis nevadensis])

HSP 1 Score: 189.119 bits (479), Expect = 2.272e-51
Identity = 158/465 (33.98%), Postives = 227/465 (48.82%), Query Frame = 0

Query:   24 FGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRK--------------KNGPGSKTNSPVHR------------SLVEKKSPVKRSSPMKLNRSFGGNSWVNSSKVRFSTTNGPLTCVNHERLNLKFTIDSKFKANLAKSSAKLVPVSGFAVDTSKTSPTPSL-PNVPTTP--DLPHSP-SESFYEDHHH--HHQYHPSQFHHHHSHMNASMMLHGVDAVKQNLDFNHFCDSTSISATTTSHSYTPTTLNTNAN--QIKMEPISPMKTELKQEPISPHRYDCLYSNNQIKQESNYFHEPLTPSSMSTDLSSVTSSLDDLDNIADLLPMHGGGDLSLDDISNLVDIPKSFPEDQKPPECLMDMDFESPFAFT-SPEDNDVFSSIDYHDSFVDNSLASFI 453
            FGS  +++NS+TPYTDATQTKK   N IKRPMNAFMV+S IER+KI E QPD+HNAEISK LG++WK+LS+E +QP+I EAERLR LHM+EYPDYKY+PRK              K G  S  N  +HR            S   K   V ++    L  S G      S++ R + T   L+ VNH RL ++ TID KFK ++ +S+ +  P            P P++   VP++P  D P SP S SFY+D       +++P+           +       + +  L  ++            SH++T   L++ A+   IKMEP+      +K+EP+     +C               E  T ++ +T  +    SL DLD++ DLL            IS+   +                    S F F+ +P+ +D+ S I  ++ +VD S AS I
Sbjct:   22 FGSQLINKNSSTPYTDATQTKKNNPNHIKRPMNAFMVWSQIERRKICEQQPDMHNAEISKRLGRRWKMLSEEERQPFIDEAERLRQLHMQEYPDYKYRPRKKAVKPLPKVSAPLAKKGRKSTPNHHLHRNDTNNNHHPSTLSTASKDRSVSQAQQHSLIHSGG------STRTRITNT---LSSVNHSRLKVRLTIDRKFKDSI-RSNRQASP-----THQQYAPPPPTVTAKVPSSPSCDTPDSPESASFYDDTSMLLDVKFNPTTVTCPSGLTATTTTPATTTSAESRLGRDY-----------GSHTFTLNRLDSGASVKSIKMEPMDYESVTIKEEPV-----EC---------------ESETAATGAT-RAGENPSLADLDSLTDLL-----------QISSDFRVDLDTLTTDLDSFDTASSSSGSHFEFSCTPDVSDMLSDIGVNNDWVDTSFASLI 428

[Close]

BLAST of sry-related hmg box c protein vs. nr
Match: gi|1238875423|ref|XP_013783248.2| (transcription factor Sox-11-B-like [Limulus polyphemus])

HSP 1 Score: 186.422 bits (472), Expect = 2.484e-51
Identity = 111/234 (47.44%), Postives = 142/234 (60.68%), Query Frame = 0

Query:   23 TFGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSPVHRSLVEKKSPVKRSSPMKLNRSFGGNSWVNSSKVRF------STTNGPLTC-VNHERLNLKFTIDSKFKANLAKSSAKLVPVSGFAVDTSKTSPTPSLPNVPTT--PDLPHSPSESFYED 247
             FGS+ V  NS TPYTDAT+ KK   N IKRPMNAFMV+S IER+KI E QPD+HNAEISK LG++WKLL+D+ +QP+I+EAERLR+LHM+EYP YKY+PRKK                 K +P     P K ++SFG      S + RF      ST+     C VN +RL LK TID KFK ++ KS  K +P+S      ++ +P   +P  P+   P  P   + S YED
Sbjct:   35 VFGSMKVATNSRTPYTDATRCKKT-ANHIKRPMNAFMVWSQIERRKICEKQPDMHNAEISKRLGRRWKLLADKERQPFIEEAERLRILHMQEYPGYKYRPRKK----------------VKATP----KPEKKHKSFGDKGGRKSKQSRFYVCNNVSTSTSVSACSVNQKRLKLKLTIDRKFKESIRKS--KEIPLS-----VNQLTPPAKVPCSPSRDEPSSPEGSNVSLYED 240

[Close]

BLAST of sry-related hmg box c protein vs. nr
Match: gi|229001910|emb|CAY12635.1| (SRY-related HMG box C protein [Platynereis dumerilii])

HSP 1 Score: 183.341 bits (464), Expect = 2.795e-51
Identity = 111/230 (48.26%), Postives = 141/230 (61.30%), Query Frame = 0

Query:   24 FGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSP-VHRSLVEKKSPVKRSSPMKLNRSFGGNSWVNSS-KVRFSTTNGPLTCVNHERLNLKFTIDSKFKANLAKSSAKLVPVSGFAVDTSKTSPTPSLPNVPTTPDLPHSP-SESFYEDHHH 250
            FGS+++   ++TPYTDAT+ KK   N IKRPMNAFMV+S IER+KI E QPD+HNAEISK LGK+WKLLS+  +QP+I+EAERLRLLHM+EYPDYKY+PRKK+    +   P    S V K    K    + L +  G      SS  +  +T        N  RL LK TID KFK  +  S  K VPVS      S+ +P   +P+ P+  D P +P S SFY D  +
Sbjct:   24 FGSMTLKPETSTPYTDATKCKKM-ANHIKRPMNAFMVWSQIERRKISEIQPDMHNAEISKRLGKRWKLLSEVDRQPFIEEAERLRLLHMQEYPDYKYRPRKKSKSMKEATPPTTQTSAVVKAKGGKERKILGLAKGSGVQKMSPSSPGLDITTVTSSFVSTN--RLKLKLTIDKKFKDTIKAS--KYVPVSA-----SQLTPPAKVPSSPSA-DSPGTPESASFYSDEPY 242

[Close]

BLAST of sry-related hmg box c protein vs. nr
Match: gi|1279727160|ref|XP_022908230.1| (putative transcription factor SOX-14 [Onthophagus taurus])

HSP 1 Score: 181.03 bits (458), Expect = 1.110e-49
Identity = 108/228 (47.37%), Postives = 140/228 (61.40%), Query Frame = 0

Query:   24 FGSLSVDQNSTTPYTDATQTKKQPVNRIKRPMNAFMVFSHIERKKIIEFQPDIHNAEISKNLGKKWKLLSDEAKQPYIQEAERLRLLHMKEYPDYKYQPRKKNGPGSKTNSPVHRSLVEKKSPVKRSSPMKLNRSFGGNSWVNSSKVRFSTTNGPLTCVNHERLNLKFTIDSKFKANLAKSSAKLVP-VSGFAVDTSKTSPTPSLPNVPTTP--DLPHSP-SESFYED 247
            FGS  VDQNS TPY+DATQTKK   N IKRPMNAFMV+S +ER+KI E QPD+HNAEISK LGK+WKLL+DE + P+IQEA+RLR LH +EYPDYKY+PRK      KT  P  +S    K P K S      +S   N   N+S++R         C    R +    ++SK K+ L +   + +P VS   +  S   P+ ++  VP++P  + P SP S SFY +
Sbjct:   33 FGSQLVDQNSATPYSDATQTKKNNPNHIKRPMNAFMVWSQMERRKICEVQPDMHNAEISKRLGKRWKLLTDEERLPFIQEADRLRQLHQREYPDYKYRPRK------KTTKPASKSGGIGKRPRKNS------KSSSKNDTNNNSEMR---------CTTVRRNSNSSDVNSKLKSRLTQQQPQKLPSVSSVTMAASMAQPSFNVAKVPSSPSCETPDSPESASFYNE 239

The following BLAST results are available for this feature:

BLAST of sry-related hmg box c protein vs. L. salmonis genes
BLAST of sry-related hmg box c protein vs. SwissProt
BLAST of sry-related hmg box c protein vs. nr

BLAST of sry-related hmg box c protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 17


Match Name	E-value	Identity	Description
EMLSAG00000002096	3.870e-82	54.95	supercontig:LSalAtl2s:LSalAtl2s1393:27154:29042:1 ...	[more]
EMLSAG00000003454	4.363e-56	53.48	supercontig:LSalAtl2s:LSalAtl2s1897:25608:26602:1 ...	[more]
EMLSAG00000002070	4.828e-52	79.41	supercontig:LSalAtl2s:LSalAtl2s1384:4574:6843:1 ge...	[more]
EMLSAG00000012988	2.085e-45	67.29	supercontig:LSalAtl2s:LSalAtl2s98:416526:433921:-1...	[more]
EMLSAG00000002555	7.728e-45	71.03	supercontig:LSalAtl2s:LSalAtl2s1508:39766:41005:-1...	[more]
EMLSAG00000011293	1.777e-44	64.04	supercontig:LSalAtl2s:LSalAtl2s776:116786:181454:1...	[more]
EMLSAG00000012986	2.338e-44	65.45	supercontig:LSalAtl2s:LSalAtl2s98:312691:316904:-1...	[more]
EMLSAG00000005555	8.338e-37	68.89	supercontig:LSalAtl2s:LSalAtl2s298:363976:367504:1...	[more]
EMLSAG00000006096	1.265e-28	41.86	supercontig:LSalAtl2s:LSalAtl2s3300:642:5231:-1 ge...	[more]
EMLSAG00000012125	1.546e-27	61.04	supercontig:LSalAtl2s:LSalAtl2s86:936340:938417:1 ...	[more]

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BLAST of sry-related hmg box c protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|108935907\|sp\|P40656.3\|SOX14_DROME	2.951e-38	64.60	RecName: Full=Putative transcription factor SOX-14	[more]
gi\|341942057\|sp\|Q06831.2\|SOX4_MOUSE	1.199e-33	60.53	RecName: Full=Transcription factor SOX-4	[more]
gi\|548952\|sp\|Q06945.1\|SOX4_HUMAN	3.048e-32	59.65	RecName: Full=Transcription factor SOX-4	[more]
gi\|82181392\|sp\|Q66JF1.1\|SOX11_XENTR	3.804e-32	57.27	RecName: Full=Transcription factor Sox-11	[more]
gi\|226709487\|sp\|P40650.2\|SX11B_XENLA	2.768e-31	55.65	RecName: Full=Transcription factor Sox-11-B; AltNa...	[more]
gi\|226709486\|sp\|Q91731.2\|SX11A_XENLA	3.173e-31	55.93	RecName: Full=Transcription factor Sox-11-A; Short...	[more]
gi\|108927565\|sp\|P47792.2\|SX19A_DANRE	8.306e-31	50.91	RecName: Full=Transcription factor Sox-19a	[more]
gi\|81885896\|sp\|Q7M6Y2.1\|SOX11_MOUSE	1.150e-30	73.33	RecName: Full=Transcription factor SOX-11	[more]
gi\|109894872\|sp\|P0C1G9.1\|SOX11_RAT	1.334e-30	73.33	RecName: Full=Transcription factor SOX-11	[more]
gi\|1351141\|sp\|P48435.1\|SOX11_CHICK	1.880e-30	73.33	RecName: Full=Transcription factor SOX-11; Short=c...	[more]

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BLAST of sry-related hmg box c protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|926641776\|ref\|XP_013787035.1\|	3.348e-56	50.00	transcription factor Sox-11-like [Limulus polyphem...	[more]
gi\|926648957\|ref\|XP_013790915.1\|	5.372e-55	51.52	transcription factor Sox-11-like [Limulus polyphem...	[more]
gi\|926645818\|ref\|XP_013789229.1\|	3.776e-54	46.93	transcription factor Sox-11-like [Limulus polyphem...	[more]
gi\|1238830387\|ref\|XP_013775452.2\|	4.307e-54	47.70	transcription factor Sox-11-A-like [Limulus polyph...	[more]
gi\|1325277714\|ref\|XP_023323496.1\|	2.136e-53	46.95	transcription factor SOX-4-like [Eurytemora affini...	[more]
gi\|926651966\|ref\|XP_013792539.1\|	1.225e-51	51.93	transcription factor SOX-4-like [Limulus polyphemu...	[more]
gi\|1228000315\|ref\|XP_021932033.1\|	2.272e-51	33.98	transcription factor sox-2-like isoform X1 [Zooter...	[more]
gi\|1238875423\|ref\|XP_013783248.2\|	2.484e-51	47.44	transcription factor Sox-11-B-like [Limulus polyph...	[more]
gi\|229001910\|emb\|CAY12635.1\|	2.795e-51	48.26	SRY-related HMG box C protein [Platynereis dumeril...	[more]
gi\|1279727160\|ref\|XP_022908230.1\|	1.110e-49	47.37	putative transcription factor SOX-14 [Onthophagus ...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold1132_size60346	supercontig	scaffold1132_size60346:7278..9182 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1	snap_masked-scaffold1132_size60346-processed-gene-0.2-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold1132_size60346:7278..9182-

gene from alignment at scaffold1132_size60346:7278..9182-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold1132_size60346-processed-gene-0.2 ID=snap_masked-scaffold1132_size60346-processed-gene-0.2|Name=sry-related hmg box c protein|organism=Tigriopus kingsejongensis|type=gene|length=1905bp|location=Sequence derived from alignment at scaffold1132_size60346:7278..9182- (Tigriopus kingsejongensis)
ATGATATCGGTGCTCAACCCTTACCGACCCATGGCACAAATGAAACTCTG
CCACCGATCGAGTGGCACTTTCGGCAGTCTGAGCGTCGATCAGAACTCGA
CCACTCCATACACAGATGCCACTCAGGTAAGGATGCATATCCCCAATGAT
CCAGACAGTTAGTTAGGCAAAGCTCCAAGGTCAGGCCATGCCAATATCGC
ACATGCACCATCACACGCATGGACACGGGCATGTGGGCTCACAAGTGATT
GGATGTGGCTTTGAAACCATCGTTTGTCATGAAAGAATTGTTTGCTCTTT
TTTCTCTCCGCTGTTTACTAGGAGCGAACAAGTTCAAAGTCTTGCGATCC
CATTTATGAGCCCATGCAATGTGGTGCTCCCGGTGAGCAGCACAGACAGA
TGGAGAGATAATCAGCTGTGTGTGCTATATCCCAGCATTGGGATGTATGT
ATATATATTTATAATCGGCTTGTGAGATATTCGGAGGACTTTCGCTGCCG
TCATGTCCAAAAGCCCATTTGTCGTCTTGGTCGCCAGGAGCGATAAAGAG
CCGAGTCATGACTCACAATTAAGCCCGAGTTTGGGTGATGCTTTGGTAGG
ATGAATGTGCAACTCTGAGAGAAGGATTCCAGTAAATAAACCCGGCTTCT
CTCACTCTTTTTGCAGACTAAGAAGCAGCCAGTGAATCGAATCAAACGTC
CCATGAATGCCTTCATGGTTTTCTCACACATCGAGCGCAAGAAGATCATT
GAATTCCAACCGGATATTCACAACGCCGAGATCTCCAAGAACTTGGGCAA
GAAGTGGAAACTGCTCAGCGATGAGGCCAAACAACCCTACATTCAGGAGG
CCGAGAGGCTGCGACTCCTTCACATGAAAGAGTACCCCGACTACAAATAC
CAGCCACGCAAGAAAAACGGTCCGGGCAGCAAAACCAACAGTCCGGTCCA
TCGCTCCCTGGTCGAGAAGAAGAGTCCGGTCAAGCGCTCCTCGCCTATGA
AGCTGAACCGCTCGTTCGGAGGCAACTCTTGGGTGAACAGCTCCAAGGTC
AGATTCAGCACGACCAACGGTCCGCTCACCTGTGTCAACCACGAGCGCCT
CAATCTGAAGTTCACCATCGACTCCAAGTTCAAAGCCAATCTGGCCAAGT
CCAGCGCCAAGCTGGTGCCCGTGTCTGGCTTCGCCGTGGACACCTCCAAG
ACCAGTCCCACGCCCTCACTACCCAATGTGCCTACCACGCCCGACTTGCC
TCACTCGCCATCCGAGTCTTTCTACGAGGATCACCACCATCACCACCAAT
ATCATCCGTCGCAGTTCCATCATCACCACTCGCATATGAACGCGTCCATG
ATGCTCCACGGTGTGGATGCTGTCAAGCAAAACCTCGACTTCAACCACTT
TTGTGATAGTACTTCCATTTCTGCCACCACTACTTCTCATTCTTACACTC
CTACCACTCTCAACACCAACGCCAATCAAATCAAGATGGAACCGATCTCG
CCCATGAAGACAGAACTCAAGCAAGAGCCGATCTCACCCCACCGATATGA
TTGCTTGTACAGCAACAACCAAATCAAGCAGGAGTCCAACTACTTTCACG
AGCCTCTCACGCCCTCGTCCATGAGCACGGATCTGTCCTCGGTGACGAGT
AGTCTGGACGATCTGGACAACATTGCCGACCTCCTCCCCATGCATGGCGG
CGGCGATCTCAGTCTGGATGACATCTCCAATCTGGTGGACATCCCCAAAA
GTTTCCCCGAAGACCAAAAACCTCCAGAGTGTCTCATGGACATGGACTTT
GAGTCCCCTTTCGCTTTCACCTCTCCCGAAGACAACGACGTCTTCTCCTC
CATCGACTACCACGACAGCTTCGTGGACAACTCTTTGGCCAGCTTCATCT
CTTGA

Synonyms

The feature 'sry-related hmg box c protein' has the following synonyms


Synonym
Tk12389

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