exosome complex component rrp46, snap_masked-scaffold18_size714446-processed-gene-6.27 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of exosome complex component rrp46 vs. L. salmonis genes
Match: EMLSAG00000011663 (supercontig:LSalAtl2s:LSalAtl2s80:819418:829604:1 gene:EMLSAG00000011663 transcript:EMLSAT00000011663 description:"maker-LSalAtl2s80-augustus-gene-8.35") HSP 1 Score: 94.3597 bits (233), Expect = 1.468e-22 Identity = 66/210 (31.43%), Postives = 114/210 (54.29%), Query Frame = 0 Query: 4 NQLRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVK-PHKEKLEGATV-EVQWRPPTGASGLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDP-AGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLE-GRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRK 209 N + ++A+ G+L DGS LS G + V GP E + K++L TV ++ +R T A + L + L S + T +PRT + LQ + DG A+++NA LAL+D+ +A++ L AAV +A + +G ++DP + + + A A FVFES ++++ L+ G+ + F + L++A + +F FYR V++K Sbjct: 21 NLINDLFAESGILSAYDGSASLSQGGTLSYAAVSGPGEPRLSTKDRLYDQTVVDIYYR--THERDFASKNLGTFSECLKSGLIPTD-YPRTGTALYLQQGEDDGSYSATSLNAGMLALMDSGIALQFLTAAVNIAYNSESGSFILDPDKLESQNAQALILFVFESRSRQMISSSLQKGKVSLKVFNKALKMAREASASIFDFYRKAVEKK 227
BLAST of exosome complex component rrp46 vs. L. salmonis genes
Match: EMLSAG00000003990 (supercontig:LSalAtl2s:LSalAtl2s213:385505:387237:1 gene:EMLSAG00000003990 transcript:EMLSAT00000003990 description:"maker-LSalAtl2s213-augustus-gene-3.21") HSP 1 Score: 69.707 bits (169), Expect = 1.181e-14 Identity = 45/160 (28.12%), Postives = 86/160 (53.75%), Query Frame = 0 Query: 1 MSENQLRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGAT----VEVQWRPPTGAS-----GLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQ 151 + ++ +R ++ ++G+L GS + G++ V+ V+GP E++ +KL+ ++ + V+++ AS E+ + L + S+V L+P++ + V + L+ DG +A+A+ AA LAL DAS+ + L V R R VDPC+K+ Sbjct: 42 LKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQ---KKLDFSSTTGILSVEYKETAFASRDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSV-RLHKKRAFVDPCKKE 197
BLAST of exosome complex component rrp46 vs. L. salmonis genes
Match: EMLSAG00000003429 (supercontig:LSalAtl2s:LSalAtl2s188:531000:531937:-1 gene:EMLSAG00000003429 transcript:EMLSAT00000003429 description:"maker-LSalAtl2s188-augustus-gene-5.17") HSP 1 Score: 57.3806 bits (137), Expect = 2.235e-10 Identity = 53/178 (29.78%), Postives = 80/178 (44.94%), Query Frame = 0 Query: 4 NQLRPVWAQLGLLG-HTDGSVMLSMGRSAVMCGVYGPAEVKP-HKEKLEGATVEVQWRPPTGASGLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMR---CLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLE 176 ++LR + +LG DGS L MG S V+ VYGP E + E A + VQ+ + A AER + T L+PR+ + + ++ L D G ++VNAA LALI A + +R C +A + P LVD +L ++ + S+ HLE Sbjct: 17 DELRRLRCRLGAFSWSADGSAYLEMGNSKVLAAVYGPREPRGVDNSSKEEAILNVQF--SSAAFSTAERKERQ-------PCIQTELYPRSQIDIFVEVLQTDCGHYCASVNAATLALIHAGIPLRDYVCACSASLIKETP----LVDI--NKLESSLGGPELILASLPKSGEIVHLE 179
BLAST of exosome complex component rrp46 vs. SwissProt
Match: gi|14285757|sp|Q9NQT4.1|EXOS5_HUMAN (RecName: Full=Exosome complex component RRP46; AltName: Full=Chronic myelogenous leukemia tumor antigen 28; AltName: Full=Exosome component 5; AltName: Full=Ribosomal RNA-processing protein 46; AltName: Full=p12B) HSP 1 Score: 158.303 bits (399), Expect = 3.392e-47 Identity = 90/207 (43.48%), Postives = 125/207 (60.39%), Query Frame = 0 Query: 6 LRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGATVEVQWRPPTGASGLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSK 212 LR + LL DGS G ++V+ GVYGPAEVK KE AT+EV RP G G+AE++ E ++R + VL +LHPRT + V LQ + G LA +NAAC+AL+DA V MR LF V A D G L++DP KQ + A A TF +SV+ +L + +G + + Q+ L A A +QH+F+FYR+++QR+YSK Sbjct: 28 LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLIRNTCEAVVLGTLHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVACALDSDGTLVLDPTSKQEKEARAVLTFALDSVERKLLMSSTKGLYSDTELQQCLAAAQAASQHVFRFYRESLQRRYSK 234
BLAST of exosome complex component rrp46 vs. SwissProt
Match: gi|21759413|sp|Q9CRA8.1|EXOS5_MOUSE (RecName: Full=Exosome complex component RRP46; AltName: Full=Exosome component 5; AltName: Full=Ribosomal RNA-processing protein 46) HSP 1 Score: 157.147 bits (396), Expect = 1.045e-46 Identity = 89/207 (43.00%), Postives = 124/207 (59.90%), Query Frame = 0 Query: 6 LRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGATVEVQWRPPTGASGLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSK 212 LR + LL DGS G ++V+ GVYGPAEVK KE AT+EV RP G G+AE++ E ++R + VL +LHPRT + V LQ + G LA +NAAC+AL+DA V MR LF V A D G L++DP KQ + A A TF +S + +L + +G + + Q+ L A A +QH+F+FYR+++QR+YSK Sbjct: 28 LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLVRNTCEAVVLGALHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGNLVLDPTTKQEKEARAILTFALDSAEQKLLMSTTKGLYSDAELQQCLAAAQAASQHIFRFYRESLQRRYSK 234
BLAST of exosome complex component rrp46 vs. SwissProt
Match: gi|75180792|sp|Q9LX74.1|EXOS5_ARATH (RecName: Full=Exosome complex exonuclease RRP46 homolog; AltName: Full=Exosome component 5; AltName: Full=Ribosomal RNA-processing protein 46) HSP 1 Score: 102.064 bits (253), Expect = 1.786e-25 Identity = 66/226 (29.20%), Postives = 101/226 (44.69%), Query Frame = 0 Query: 4 NQLRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGATVEVQWRPPTGASGLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVF-----------------ESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSK 212 NQLRP+ +L GS S G + V+ VYGP E E A EV W+P +G G E+ E +L+ + S + +++P T V +Q + DG L A+NAAC AL+DA + M+ L A+ G L++DP + + + TA A VF E V+ ++ + G + ++ A L F+R Q+ SK Sbjct: 12 NQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKACFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLPEGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQSSSK 237
BLAST of exosome complex component rrp46 vs. SwissProt
Match: gi|29336822|sp|Q8U0L9.1|RRP41_PYRFU (RecName: Full=Exosome complex component Rrp41) HSP 1 Score: 102.064 bits (253), Expect = 2.229e-25 Identity = 58/217 (26.73%), Postives = 114/217 (52.53%), Query Frame = 0 Query: 5 QLRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKP-HKEKLEGATVEVQWR------PPTGASGLAERALE--SVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSK 212 +LRP+ ++G+L + +GS + G++ ++ VYGP E+ P H ++ + A + V++ G R++E V+RG + +++ + PRT + V ++ L D G + + AA LAL DA + MR L AA + G +++D +++ A +++D+ ++G ++ F E ++LA GA+ ++Q R+ ++ KY K Sbjct: 25 ELRPIKMKVGVLKNANGSAYIEWGKNKIIAAVYGPREIHPKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIRGALEPALILEMFPRTAIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACSAGK-IEGEIVLDLNKEEDNYGEADVPVAIMPIKNDITLLQMDGYLTKEEFIEAVKLAIKGAKAVYQKQREALKEKYLK 240
BLAST of exosome complex component rrp46 vs. SwissProt
Match: gi|254782534|sp|A2BKC0.1|RRP41_HYPBU (RecName: Full=Exosome complex component Rrp41) HSP 1 Score: 100.523 bits (249), Expect = 1.147e-24 Identity = 67/217 (30.88%), Postives = 104/217 (47.93%), Query Frame = 0 Query: 4 NQLRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGATVEVQWRPPTGASGLAERA----------LESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKY 210 QLRP+ ++G+L + DGS ++ G + V+ VYGP E P L + ++ R AER L V+R + + V++ L+PRT + V ++ L DGG +A+ AA LAL DA +AMR L A V V + G L++D + A A VL L G F + L+LA G Q ++ ++ +++KY Sbjct: 32 EQLRPIRMEVGVLSNADGSALVEYGGTRVIAAVYGPREAHPRHVALPDRAI-IRCRYHMAPFSTAERKTPAPTRREVELSKVIREALEAVVISELYPRTAIDVYMEVLQSDGGTRTAAITAASLALADAGIAMRDLVAGVAVGK-VDGVLVLDIDEIEDNYAEADMPVAMAPSLDKVLLLQLNGVLTHDEFVKALELARKGIQVIYNLQKEALRKKY 246
BLAST of exosome complex component rrp46 vs. SwissProt
Match: gi|73919276|sp|Q5JIR6.1|RRP41_THEKO (RecName: Full=Exosome complex component Rrp41) HSP 1 Score: 100.138 bits (248), Expect = 1.228e-24 Identity = 60/217 (27.65%), Postives = 113/217 (52.07%), Query Frame = 0 Query: 5 QLRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKP-HKEKLEGATVEVQWR------PPTGASGLAERALE--SVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSK 212 +LRP+ ++G+L + DGS + G++ V+ VYGP E+ P H ++ + A + V++ G R++E V+RG + ++L + PRT + V ++ L D G + + AA LAL DA + M+ L AA + G +++D +++ A +++D+ ++G + F E ++LA GA+ ++Q R+ ++ KY K Sbjct: 25 ELRPIKMEVGVLKNADGSAYVEWGKNKVLAAVYGPREIHPKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALLLHMFPRTAIDVFIEILQADAGTRVAGITAASLALADAGIPMKDLVAACAAGK-IDGEIVLDLNKEEDNYGEADVPVAIMPLKNDITLLQMDGYLTKDEFLEAVRLAIKGAKAVYQKQREALKEKYLK 240
BLAST of exosome complex component rrp46 vs. SwissProt
Match: gi|226740341|sp|B6YSI2.1|RRP41_THEON (RecName: Full=Exosome complex component Rrp41) HSP 1 Score: 100.138 bits (248), Expect = 1.423e-24 Identity = 58/217 (26.73%), Postives = 112/217 (51.61%), Query Frame = 0 Query: 5 QLRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKP-HKEKLEGATVEVQWR------PPTGASGLAERALE--SVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSK 212 +LRP+ ++G+L + DGS + G++ ++ VYGP E+ P H ++ + A + V++ G R++E V+RG + +++ + PRT + + ++ L D G + + AA LAL DA + MR L AA + G +++D +++ A +++D+ ++G F E ++LA GA+ ++Q R+ ++ KY K Sbjct: 25 ELRPIKMEVGVLKNADGSAYVEWGKNKILAAVYGPREIHPKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALILEMFPRTAIDIFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGK-IEGEIVLDLNKEEDNYGEADVPVAIMPLKNDITLLQMDGYLTRDEFIEAVRLAIKGAKAVYQKQREALKEKYLK 240
BLAST of exosome complex component rrp46 vs. SwissProt
Match: gi|259645401|sp|C5A2B9.1|RRP41_THEGJ (RecName: Full=Exosome complex component Rrp41) HSP 1 Score: 99.7525 bits (247), Expect = 2.191e-24 Identity = 60/217 (27.65%), Postives = 112/217 (51.61%), Query Frame = 0 Query: 5 QLRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKP-HKEKLEGATVEVQWR------PPTGASGLAERALE--SVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSK 212 +LR + ++G+L + DGS + G++ ++ VYGP E+ P H ++ + A + V++ G R++E V+RG + +++ + PRT V V ++ L D G + + AA LAL DA V MR L AA + G +++D + + A +++D+ ++G ++ F E ++LA GA+ ++Q R+ ++ KY K Sbjct: 25 ELRKIHMEVGVLKNADGSAYIEWGKNKILAAVYGPREIHPKHLQRPDTAVLRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALILEMFPRTVVDVFIEVLQADAGTRVAGITAASLALADAGVPMRDLVAACAAGK-IDGEIVLDLNKDEDNYGEADVPVAIMPLKNDITLLQMDGYLTKEEFIEAVKLAIKGAKAVYQKQREALKEKYLK 240
BLAST of exosome complex component rrp46 vs. SwissProt
Match: gi|29337010|sp|Q9V119.1|RRP41_PYRAB (RecName: Full=Exosome complex component Rrp41) HSP 1 Score: 98.2117 bits (243), Expect = 8.150e-24 Identity = 57/217 (26.27%), Postives = 113/217 (52.07%), Query Frame = 0 Query: 5 QLRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKP-HKEKLEGATVEVQWR------PPTGASGLAERALE--SVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSK 212 +LRP+ ++G+L + +GS + G++ ++ VYGP E+ P H ++ + A + V++ G R++E V++G + +++ + PRT + V ++ L D G + + AA LAL DA + MR L AA + G +++D +++ A +++D+ ++G + F E ++LA GA+ ++Q R+ ++ KY K Sbjct: 25 ELRPIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPRELHPKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIKGALEPALILEMFPRTAIDVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGK-IEGEIVLDLNKEEDNYGEADVPVAIMPLKNDITLLQMDGYLTKDEFIEAVKLAIKGAKAVYQKQREALKEKYLK 240
BLAST of exosome complex component rrp46 vs. SwissProt
Match: gi|29336576|sp|O29757.1|RRP41_ARCFU (RecName: Full=Exosome complex component Rrp41) HSP 1 Score: 97.4413 bits (241), Expect = 1.591e-23 Identity = 60/225 (26.67%), Postives = 113/225 (50.22%), Query Frame = 0 Query: 4 NQLRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKP------------HKEKLEGATVEVQWRPPTGASGLAERALE--SVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVF----ESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKY 210 ++LRP+ + +L DGS L MG++ V+ V+GP EV P ++ + +VE + RP G R++E V + + ++ L PR+ + + ++ L D G + +NAA +AL+DA V M+ + +V V + G+L++DP +++ A F F ++S L ++GR ++ ++LA GA +++ R+ + R+Y Sbjct: 24 DELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPRHLQDPSKAIIRYRYNMAPFSVEERKRP-----GPDRRSIEISKVSKEAFEAVIMKELFPRSAIDIFVEVLQADAGSRTACLNAASVALVDAGVPMKGMITSVAVGK-ADGQLVLDPMKEEDNFGEADMPFAFLIRNGKIESIAL-LQMDGRMTRDEVKQAIELAKKGALQIYEMQREAILRRY 241
BLAST of exosome complex component rrp46 vs. nr
Match: gi|1339049462|ref|XP_023712969.1| (exosome complex component RRP46 [Cryptotermes secundus]) HSP 1 Score: 183.341 bits (464), Expect = 1.243e-54 Identity = 85/206 (41.26%), Postives = 135/206 (65.53%), Query Frame = 0 Query: 3 ENQLRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGATVEVQWRPPTGASGLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQR 208 E+ LRP+ QL +L +DGS M + G +AV+ V+GPAEVKP + ++ A+VE +RP TG + ++ E+++R S+++L +LHPRT + + +Q + GG LA AVNAACLALI++ +AM+ L AAV D +L+DP KQL+ + AS TFVF+S++ +++A H GR+ + ++E L G+ +F FYR+ V++ Sbjct: 10 EDCLRPMNCQLNVLSRSDGSAMFTQGDTAVVTAVFGPAEVKPQRILIDKASVEALYRPKTGLPRVHDKMRETLIRNTCSTALLVTLHPRTSISIIVQEMQDSGGLLACAVNAACLALINSGIAMKFLVAAVSCMIDHEDNILIDPNSKQLKGSKASLTFVFDSIKKNIMACHTTGRFTQLQYEESLLKCRNGSDKIFSFYREIVRK 215
BLAST of exosome complex component rrp46 vs. nr
Match: gi|926624123|ref|XP_013777505.1| (exosome complex component RRP46-like [Limulus polyphemus]) HSP 1 Score: 174.866 bits (442), Expect = 2.535e-51 Identity = 79/209 (37.80%), Postives = 132/209 (63.16%), Query Frame = 0 Query: 6 LRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGATVEVQWRPPTGASGLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSKDL 214 +R + A+L L DGS +++ G + V VYGP EV+P+KE + A ++ ++P TG G E+ E V+R + +++L +LHPR +++ LQ + DGG LA +N+AC+AL+DA +AM+CL AA+ G +L+DP KQ A A TF FES+ +V+ ++ +G + E F++ L++ + + +F FYR+ VQR++SK++ Sbjct: 13 IRTLSAELSNLSRPDGSAIVAQGDTVVQSAVYGPVEVRPNKELPDKAYFDIVYKPLTGLPGCPEKLRERVIRNTLEATLLVNLHPRKSINLILQEMQNDGGLLACCINSACMALMDAGLAMKCLVAALNAVITTEGDVLLDPSLKQEEEAKACFTFAFESINHEVITSNTQGSYSETEFKKCLEICRSASMKVFDFYRECVQRRFSKEI 221
BLAST of exosome complex component rrp46 vs. nr
Match: gi|1227966439|ref|XP_021914573.1| (exosome complex component RRP46 [Zootermopsis nevadensis]) HSP 1 Score: 174.096 bits (440), Expect = 3.763e-51 Identity = 82/210 (39.05%), Postives = 131/210 (62.38%), Query Frame = 0 Query: 3 ENQLRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGATVEVQWRPPTGASGLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSK 212 E ++RP+ +L +L +DGS + + G +AV+ V+GP EVKP + ++ A VE +RP +G + +R ES+LR +S+L +LHPRT + + +Q + GG LA AVN+ACLAL+ + +AM+ L AAV +LL+DP KQL+ + AS TFVF+SV+ + +A+H G + + +QE L + ++F YRD V++ S+ Sbjct: 7 EQRIRPMNCELKVLSRSDGSAIFTQGDTAVVTAVFGPVEVKPQRILIDKACVEALYRPKSGLPCVHDRMHESLLRNTCETSLLATLHPRTSISIIIQEMQDSGGLLACAVNSACLALMSSGIAMKFLVAAVSCMISQEDKLLIDPTNKQLKDSKASLTFVFDSVKKNTVASHTTGSFTQIQYQESLMKCRNASDNIFSLYRDMVKKYASR 216
BLAST of exosome complex component rrp46 vs. nr
Match: gi|971445889|ref|XP_015127981.1| (PREDICTED: exosome complex component RRP46 [Gallus gallus]) HSP 1 Score: 172.555 bits (436), Expect = 1.554e-50 Identity = 95/207 (45.89%), Postives = 121/207 (58.45%), Query Frame = 0 Query: 6 LRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGATVEVQWRPPTGASGLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSK 212 LRP + GLL DGS G ++V+ G+YGPAEVK +E +GATVEV RP G G+AER+ E +LR + +L SLHPRT + V LQ L G LA +NAAC+ L+DA + + LF V A DP G +++DP +Q + A A TF +S Q VLAT G + Q L A A +FQFYRD VQRKYSK Sbjct: 12 LRPFSCEQGLLSRPDGSATFVQGDTSVLAGLYGPAEVKGSRESPDGATVEVLLRPKVGLPGVAERSREQLLRRTFEAVLLGSLHPRTSITVVLQVLSDAGSLLACCLNAACMGLLDAGLPLSSLFCGVTCALDPHGDIILDPTARQEQEAHAVLTFAIDSAQRKVLATTTRGSCSAEEMQRCLVAAQRAADTIFQFYRDCVQRKYSK 218
BLAST of exosome complex component rrp46 vs. nr
Match: gi|744580027|ref|XP_010983543.1| (PREDICTED: exosome complex component RRP46 [Camelus dromedarius]) HSP 1 Score: 171.4 bits (433), Expect = 6.500e-50 Identity = 90/207 (43.48%), Postives = 125/207 (60.39%), Query Frame = 0 Query: 6 LRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGATVEVQWRPPTGASGLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSK 212 LR + LL DGS G ++V+ GVYGPAEVK KE AT+EV RP TG G+AE++ E ++R + VL +LHPRT + V LQ + G LA +NAAC+AL+DA V MR LF V A D G L++DP KQ + A A TF +SV+ +L + +G + + Q+ L A +QH+F+FYR+++QR+YSK Sbjct: 28 LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKTGLPGVAEKSRERLIRNTCEAVVLGALHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSGGTLMLDPTAKQEKEARAVLTFALDSVERKLLMSTTKGLYSDAELQQCLAAAQTASQHVFRFYRESLQRRYSK 234
BLAST of exosome complex component rrp46 vs. nr
Match: gi|560927422|ref|XP_006189877.1| (PREDICTED: exosome complex component RRP46 [Camelus ferus] >gi|743704637|ref|XP_010945600.1| PREDICTED: exosome complex component RRP46 [Camelus bactrianus]) HSP 1 Score: 171.4 bits (433), Expect = 8.903e-50 Identity = 90/207 (43.48%), Postives = 125/207 (60.39%), Query Frame = 0 Query: 6 LRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGATVEVQWRPPTGASGLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSK 212 LR + LL DGS G ++V+ GVYGPAEVK KE AT+EV RP TG G+AE++ E ++R + VL +LHPRT + V LQ + G LA +NAAC+AL+DA V MR LF V A D G L++DP KQ + A A TF +SV+ +L + +G + + Q+ L A +QH+F+FYR+++QR+YSK Sbjct: 28 LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKTGLPGVAEKSRERLIRNTCEAVVLGALHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSGGTLMLDPTAKQEKEARAVLTFALDSVERKLLMSTTKGLYSDAELQQCLAAAQTASQHVFRFYRESLQRRYSK 234
BLAST of exosome complex component rrp46 vs. nr
Match: gi|321475274|gb|EFX86237.1| (hypothetical protein DAPPUDRAFT_193332 [Daphnia pulex]) HSP 1 Score: 170.629 bits (431), Expect = 8.952e-50 Identity = 81/213 (38.03%), Postives = 128/213 (60.09%), Query Frame = 0 Query: 3 ENQLRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGATVEVQWRPPTGASGLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTA-TASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSKDL 214 EN +R + + +L DGSVM S G + VM VYGP E K KE + +E+ ++P TG G+AER E +++ + +LT+LHPRT V +++Q + G LA+++NA CLAL+D+ + ++CL AAV D R+++DPC ++ A TF F+S + +++ +H EG+ P Q FQ+ + L + +F FYR V RK+S +L Sbjct: 5 ENSIRALKCEQSVLSRADGSVMFSQGNTVVMASVYGPLEAKIQKELSDRMYIELNYKPKTGMPGVAERGKEKLIKTTCNHIILTNLHPRTAVCITVQEMQDGGTLLAASINAVCLALLDSGLPLQCLVAAVTCLVDKKDRIILDPCISTVKEGYKAMFTFAFDSQKYNLILSHCEGQVPYQLFQKAMVLCQKASHVIFDFYRQAVLRKFSNEL 217
BLAST of exosome complex component rrp46 vs. nr
Match: gi|632989685|ref|XP_007883779.1| (PREDICTED: exosome complex component RRP46 [Callorhinchus milii]) HSP 1 Score: 170.629 bits (431), Expect = 1.103e-49 Identity = 86/211 (40.76%), Postives = 124/211 (58.77%), Query Frame = 0 Query: 6 LRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGATVEVQWRPPTGASGLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSKDLAQ 216 LRP + LL DGS + G + V+ VYGPAEVK KE + AT+EV +P G G+AER+ E ++R +++LT+LHPR+ + V LQ + G L+ +NAAC ALIDA + MR LF + D G +L+DP KQ + A TF +SV VL + +G + + Q+ + G++ +FQFYRD+V+RKYSK L + Sbjct: 11 LRPFGCEYSLLSRPDGSACFTQGDTTVLAAVYGPAEVKVSKEIFDKATLEVLLKPKVGLPGVAERSKEQLIRNTCEATILTALHPRSSITVVLQVIHDAGSLLSCCLNAACTALIDAGLPMRSLFCGITCLIDSDGNILLDPTSKQEKEYRAVLTFSMDSVDKKVLLSSTKGSYSVEELQQCIATCQKGSEKVFQFYRDSVRRKYSKLLNE 221
BLAST of exosome complex component rrp46 vs. nr
Match: gi|1326156068|ref|XP_023355788.1| (exosome complex component RRP46 [Sarcophilus harrisii]) HSP 1 Score: 170.629 bits (431), Expect = 1.144e-49 Identity = 89/207 (43.00%), Postives = 124/207 (59.90%), Query Frame = 0 Query: 6 LRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGATVEVQWRPPTGASGLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSK 212 LR + LL DGS G ++V+ GVYGPAEVK KE AT+EV +P G G+AE++ E ++R + VL +LHPRT + ++LQ + G LA +NAACLAL+DA V MR LF V A DP G L++DP KQ + A A TF +S + +L + +G + FQ+ L A + H+F+FYRD++QR+YSK Sbjct: 24 LRHFACEQNLLSRPDGSASFLQGDTSVLVGVYGPAEVKVSKEIFNKATLEVILKPKIGLPGVAEKSRERLIRNTCEAVVLGTLHPRTSITIALQIVSDAGSLLACCLNAACLALVDAGVPMRALFCGVTCALDPDGALILDPTAKQEKEARAILTFALDSTEQKLLMSTTKGLYSVAEFQQCLAAAQHASHHIFRFYRDSLQRRYSK 230
BLAST of exosome complex component rrp46 vs. nr
Match: gi|560985695|ref|XP_006215046.1| (PREDICTED: exosome complex component RRP46 [Vicugna pacos]) HSP 1 Score: 171.014 bits (432), Expect = 1.260e-49 Identity = 90/207 (43.48%), Postives = 125/207 (60.39%), Query Frame = 0 Query: 6 LRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGATVEVQWRPPTGASGLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQLRTATASATFVFESVQSDVLATHLEGRWPEQAFQEGLQLASAGAQHLFQFYRDTVQRKYSK 212 LR + LL DGS G ++V+ GVYGPAEVK KE AT+EV RP TG G+AE++ E ++R + VL +LHPRT + V LQ + G LA +NAAC+AL+DA V MR LF V A D G L++DP KQ + A A TF +SV+ +L + +G + + Q+ L A +QH+F+FYR+++QR+YSK Sbjct: 28 LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKTGLPGVAEKSRERLIRNTCEAVVLGALHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGTLMLDPTAKQEKEARAVLTFALDSVERKLLMSTTKGLYSDAELQQCLAAAQTASQHVFRFYRESLQRRYSK 234 The following BLAST results are available for this feature:
BLAST of exosome complex component rrp46 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of exosome complex component rrp46 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of exosome complex component rrp46 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold18_size714446:713656..714306- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold18_size714446-processed-gene-6.27 ID=snap_masked-scaffold18_size714446-processed-gene-6.27|Name=exosome complex component rrp46|organism=Tigriopus kingsejongensis|type=gene|length=651bp|location=Sequence derived from alignment at scaffold18_size714446:713656..714306- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'exosome complex component rrp46' has the following synonyms
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