EMLSAG00000003990, EMLSAG00000003990-686756 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000003990 vs. GO
Match: - (symbol:exosc6 "exosome component 6" species:7955 "Danio rerio" [GO:0000178 "exosome (RNase complex)" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA] InterPro:IPR015847 Pfam:PF01138 INTERPRO:IPR001247 ZFIN:ZDB-GENE-050522-362 GO:GO:0005737 GO:GO:0005730 GO:GO:0003723 GO:GO:0000178 InterPro:IPR020568 SUPFAM:SSF54211 GO:GO:0006364 Gene3D:3.30.230.70 InterPro:IPR027408 SUPFAM:SSF55666 eggNOG:COG0689 GeneTree:ENSGT00550000074804 HOGENOM:HOG000229515 EMBL:BC065602 EMBL:BC095173 RefSeq:NP_001018322.1 UniGene:Dr.80144 ProteinModelPortal:Q6P0I8 Ensembl:ENSDART00000052348 GeneID:326786 KEGG:dre:326786 CTD:118460 HOVERGEN:HBG057826 InParanoid:Q6P0I8 KO:K12587 OMA:AVTCASM OrthoDB:EOG7BKCVP TreeFam:TF323886 NextBio:20809731 PRO:PR:Q6P0I8 Bgee:Q6P0I8 Uniprot:Q6P0I8) HSP 1 Score: 166.007 bits (419), Expect = 1.024e-47 Identity = 89/264 (33.71%), Postives = 148/264 (56.06%), Query Frame = 0 Query: 7 DFRRFQSPSDAKDYRIFLKNENKGEKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTS---DNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEK 267 D +R + P +++ +FL + +K K G R + VR +F G++++ KGSAYIE G TK+I SV+GP+E +++ + TG L +++ F+ S E+++S L E+LR VCLH YP+S+IDV + VLENDGS +A A+T AS+AL+DA I ++D+ +G ++R VDP EE +N G + + P+L Q+ L DG M + L+ ++ + + P++Q+ L ++ +K Sbjct: 4 DTKRIRGPEESQSPLLFL-SPDKAPKAPSSRQGVR-GNGDVRPVFARCGLVSQAKGSAYIEAGNTKIICSVYGPKETERRDETDMKTGRLVCDFRLAPFSCVKRGAWIQGSEERDLSATLMESLRPGVCLHRYPRSQIDVNVMVLENDGSVLAHAVTCASMALADAGIEMYDIVLGCTLRQSGNACLVDPSYAEECGSWQEGYGDNQGCVTLALLPNLNQVSGLNADGEMREDTLTEAMRTCMDGCHKLYPVVQQALTRAVKKK 265
BLAST of EMLSAG00000003990 vs. GO
Match: - (symbol:exosc6 "Exosome complex component MTR3" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000178 "exosome (RNase complex)" evidence=ISS] InterPro:IPR015847 Pfam:PF01138 INTERPRO:IPR001247 GO:GO:0005737 GO:GO:0005730 GO:GO:0003723 GO:GO:0000178 InterPro:IPR020568 SUPFAM:SSF54211 GO:GO:0006364 Gene3D:3.30.230.70 InterPro:IPR027408 SUPFAM:SSF55666 eggNOG:COG0689 GeneTree:ENSGT00550000074804 HOGENOM:HOG000229515 HOVERGEN:HBG057826 KO:K12587 OrthoDB:EOG7BKCVP TreeFam:TF323886 EMBL:CR762221 EMBL:BC136080 RefSeq:NP_001017016.1 UniGene:Str.4704 ProteinModelPortal:Q28F19 SMR:Q28F19 STRING:8364.ENSXETP00000016677 Ensembl:ENSXETT00000016677 GeneID:549770 KEGG:xtr:549770 CTD:5916 Xenbase:XB-GENE-998313 OMA:FKFATFS Bgee:Q28F19 Uniprot:Q28F19) HSP 1 Score: 122.094 bits (305), Expect = 4.288e-31 Identity = 78/271 (28.78%), Postives = 135/271 (49.82%), Query Frame = 0 Query: 7 DFRRFQSPSDAKDYRIFLKNENKGEKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQ--TKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTSDNS-----NEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSV-RLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEKLS 269 D RR + P +++ +++ +E G+ R G S R +F G+L++ KGSAY+E G TKV+ +V GPRE + + T G L + + F+ R S + + L L E+L V L YP++++ V++ VLE+ GSA+ A++ ASLAL+DA I +FDLA+G + R +DP EE + + G + + P+L Q+ L+ G ++ + + P++ +CL+++ K+ Sbjct: 4 DSRRIRGPEESQSPLLYVLSEEGGKAAGRRGRGP----SEPRPVFVRAGLLSQAKGSAYLEAGSGGTKVLCAVHGPRERGMGGERAETRGRLLCDLRWAPFSRRGPWSGSCPAGPSPRQAGLQLQESLEPAVRLDRYPRAEVIVWVLVLEDRGSALPAAVSCASLALADAGIEMFDLALGCGLSRGPGGELLLDPDDDEE-------EAGSGGTMSLSLLPTLNQVSGLISSGEWEGESSEEAVRLCMEGCQRLYPVLHQCLVKATKRKIP 263
BLAST of EMLSAG00000003990 vs. GO
Match: - (symbol:RRP41L "AT4G27490" species:3702 "Arabidopsis thaliana" [GO:0000175 "3'-5'-exoribonuclease activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0006396 "RNA processing" evidence=ISS] [GO:0009909 "regulation of flower development" evidence=RCA] [GO:0016570 "histone modification" evidence=RCA] [GO:0034968 "histone lysine methylation" evidence=RCA] [GO:0048449 "floral organ formation" evidence=RCA] [GO:0005634 "nucleus" evidence=IDA] [GO:0008408 "3'-5' exonuclease activity" evidence=IMP] [GO:0009845 "seed germination" evidence=IMP] [GO:0090351 "seedling development" evidence=IMP] InterPro:IPR015847 Pfam:PF01138 INTERPRO:IPR001247 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687 GO:GO:0009845 GO:GO:0008408 InterPro:IPR020568 SUPFAM:SSF54211 Gene3D:3.30.230.70 InterPro:IPR027408 Pfam:PF03725 SUPFAM:SSF55666 eggNOG:COG0689 HOGENOM:HOG000229515 KO:K12587 OMA:AVTCASM EMBL:BT029998 EMBL:BT030054 RefSeq:NP_194479.2 UniGene:At.46035 STRING:3702.AT4G27490.1-P EnsemblPlants:AT4G27490.1 GeneID:828858 KEGG:ath:AT4G27490 TAIR:At4g27490 InParanoid:A2RVK7 ProtClustDB:CLSN2680990 PRO:PR:A2RVK7 Genevestigator:A2RVK7 Uniprot:A2RVK7) HSP 1 Score: 115.546 bits (288), Expect = 8.288e-29 Identity = 75/231 (32.47%), Postives = 115/231 (49.78%), Query Frame = 0 Query: 33 DKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIES 263 D R DG R + G ++ GSAY E G TKVI SVFGPRE +K + +S G L+ T FAS ++ K S L + L + + +PK+ +DVF VLE+ GS ++ I+ ASLAL+DA I ++DL SV K +DP +EEG DG+ ++ PS +I L G ++ +Q + ++ + ++++CL +S Sbjct: 31 DWSRPDGRGFHQ--CRPALLQTGAVSSASGSAYAEFGNTKVIVSVFGPRESKKAMVYSDV-GRLNCNVSYTNFASPTLGQGTDHKEYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLSVLISCASLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCE--------DGSFMMTCMPSRYEITQLTITGEWTTPNINEAMQLCLDASSKLGEIMRDCLKQS 250
BLAST of EMLSAG00000003990 vs. GO
Match: - (symbol:RRP41 "AT3G61620" species:3702 "Arabidopsis thaliana" [GO:0000175 "3'-5'-exoribonuclease activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006396 "RNA processing" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR015847 Pfam:PF01138 INTERPRO:IPR001247 GO:GO:0005829 EMBL:CP002686 GO:GO:0090305 GO:GO:0004527 EMBL:AL132959 InterPro:IPR020568 SUPFAM:SSF54211 Gene3D:3.30.230.70 InterPro:IPR027408 Pfam:PF03725 SUPFAM:SSF55666 eggNOG:COG0689 HOGENOM:HOG000229515 KO:K11600 OMA:DITLLQM EMBL:AF191741 EMBL:BT005485 EMBL:AK118846 PIR:T47954 RefSeq:NP_001118878.1 RefSeq:NP_191721.1 UniGene:At.20638 STRING:3702.AT3G61620.1-P DNASU:825335 EnsemblPlants:AT3G61620.1 EnsemblPlants:AT3G61620.2 GeneID:825335 KEGG:ath:AT3G61620 TAIR:At3g61620 InParanoid:Q9SP08 ProtClustDB:CLSN2685258 PRO:PR:Q9SP08 Genevestigator:Q9SP08 Uniprot:Q9SP08) HSP 1 Score: 108.227 bits (269), Expect = 2.576e-26 Identity = 68/198 (34.34%), Postives = 105/198 (53.03%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKK-LDFSSTTGILSVEYKETAFASRDTSDNSNEKN---ISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQ 229 RLDG R + +R + EVGV++K GSA E G TKVIA+V+GPREIQ K + ++ EY F++ D ++ +SL + +T+ + + L P S+ID+F+ VL+ DG + I AA+LAL+DA I + DLA+ S +D + D ++ +G P L++ V+LLQ Sbjct: 10 RLDGRRFNE--MRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQKKNDHAVVLCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEACILTELMPHSQIDIFLQVLQADGGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLD--------LNYVEDSAGGADVTVGILPKLDK-VSLLQ 196
BLAST of EMLSAG00000003990 vs. GO
Match: - (symbol:Ski6 "Ski6" species:7227 "Drosophila melanogaster" [GO:0000176 "nuclear exosome (RNase complex)" evidence=ISS;IDA] [GO:0000175 "3'-5'-exoribonuclease activity" evidence=ISS] [GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=ISS] [GO:0035327 "transcriptionally active chromatin" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005652 "nuclear lamina" evidence=IDA] [GO:0010468 "regulation of gene expression" evidence=IMP] InterPro:IPR015847 Pfam:PF01138 INTERPRO:IPR001247 GO:GO:0005737 GO:GO:0010468 InterPro:IPR020568 SUPFAM:SSF54211 GO:GO:0035327 GO:GO:0005652 GO:GO:0000176 Gene3D:3.30.230.70 InterPro:IPR027408 SUPFAM:SSF55666 eggNOG:COG0689 OrthoDB:EOG74J98C EMBL:AY071632 ProteinModelPortal:Q8SYC8 SMR:Q8SYC8 IntAct:Q8SYC8 STRING:7227.FBpp0080062 PaxDb:Q8SYC8 PRIDE:Q8SYC8 FlyBase:FBgn0032487 InParanoid:Q8SYC8 Bgee:Q8SYC8 Uniprot:Q8SYC8) HSP 1 Score: 99.7525 bits (247), Expect = 3.240e-23 Identity = 54/155 (34.84%), Postives = 93/155 (60.00%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAF--ASRDTSDNSNEKNIS--LFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHK 186 RLDG R + +R + C++GV + GSAY+E+G TKV+A+V+GP + + + T +++ +Y + F A R + K++ L+L + L + + LYP+S+ID+++ VL++DG+ A A+ AA+LAL DA I L + + + L K Sbjct: 14 RLDGRRPHE--LRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKG----NQTESVINCQYSQATFSTAERKNRPRGDRKSLEFKLYLQQALSAAIKSELYPRSQIDIYVEVLQDDGANYAVALNAATLALIDAGICLNEFIVACTASLSK 162
BLAST of EMLSAG00000003990 vs. GO
Match: - (symbol:exosc4 "exosome component 4" species:7955 "Danio rerio" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA] InterPro:IPR015847 Pfam:PF01138 INTERPRO:IPR001247 ZFIN:ZDB-GENE-040426-1702 GO:GO:0090305 GO:GO:0004527 InterPro:IPR020568 SUPFAM:SSF54211 Gene3D:3.30.230.70 InterPro:IPR027408 Pfam:PF03725 SUPFAM:SSF55666 CTD:54512 HOGENOM:HOG000229515 HOVERGEN:HBG051519 KO:K11600 EMBL:BC059525 EMBL:BC153617 EMBL:AY576990 RefSeq:NP_957033.1 UniGene:Dr.107456 DNASU:393712 GeneID:393712 KEGG:dre:393712 InParanoid:Q6PBZ8 NextBio:20814714 Uniprot:Q6PBZ8) HSP 1 Score: 97.4413 bits (241), Expect = 2.152e-22 Identity = 70/241 (29.05%), Postives = 113/241 (46.89%), Query Frame = 0 Query: 35 YRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFS-STTGILSVEYKETAFAS----RDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEE---GIHASITDEENDGNIVIGYQPSLEQIVALLQ-DGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNE 266 YRLDG K + +R + + V + GSAY+E+G TK +A V+GP EI+ S I++ +Y F++ R + +SL L +T + V LYP+S+ID+++ +L+ DG + + AA+LAL DA I + D S + D C EE G ++ GNI ALLQ D + Q L + ++ + + KE ++ + + L E Sbjct: 12 YRLDGR--KATELRKVQARMSVFAQADGSAYLEQGNTKALAVVYGPHEIRGSRSKSLHDRAIINCQYSMATFSTAERKRRPHGDRKSSEMSLHLKQTFEAAVLTELYPRSQIDIYVKILQADGGNYSACVNAATLALVDAGIPMRDYVCACSAGFVEDTPLADLCHAEESGGGTALALALLPRSGNI------------ALLQMDARLHQDHLDTLMEAAMTACKEFSKVLDSVVRQHLEE 238
BLAST of EMLSAG00000003990 vs. GO
Match: - (symbol:Exosc6 "exosome component 6" species:10116 "Rattus norvegicus" [GO:0000178 "exosome (RNase complex)" evidence=IEA;ISO] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0045006 "DNA deamination" evidence=IEA;ISO] [GO:0045190 "isotype switching" evidence=ISO] [GO:0045830 "positive regulation of isotype switching" evidence=ISO] [GO:0004532 "exoribonuclease activity" evidence=ISO] InterPro:IPR015847 Pfam:PF01138 RGD:1309832 INTERPRO:IPR001247 GO:GO:0000178 InterPro:IPR020568 SUPFAM:SSF54211 Gene3D:3.30.230.70 InterPro:IPR027408 SUPFAM:SSF55666 GO:GO:0045006 GeneTree:ENSGT00550000074804 CTD:118460 KO:K12587 TreeFam:TF323886 OMA:FDRRRIN OrthoDB:EOG7JX35Q EMBL:AABR06098684 PRIDE:D3ZW38 Ensembl:ENSRNOT00000025179 KEGG:rno:307850 UCSC:RGD:1309832 NextBio:657982 PRO:PR:D3ZW38 Uniprot:D3ZW38) HSP 1 Score: 96.2857 bits (238), Expect = 8.090e-22 Identity = 77/275 (28.00%), Postives = 136/275 (49.45%), Query Frame = 0 Query: 7 DFRRFQSPSDAKDYRIFL--KNENKGEKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTT-----------GILSVEYKETAFASRD---TSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRA---FVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETL-PMIQECLI 261 D RR + P +++ +++ ++E +D RL R ++ G+L++ KGSAY+E G TKV+ +V GPR+ + G L +++ F+ R +S ++ + L L E L V L YP+++++V +LE+ GSA+A A+TAA+LAL+DA + ++DL +G + L + +DP + EE E ++ + + P L Q+ LL G QT + L + + L P++Q+CL+ Sbjct: 4 DHRRIRGPEESQPPQLYAAEEDETPAARDPTRL----------RPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGEAPAALRGRLLCDFRRAPFSGRRRRAPQGSSEDRELGLALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLTPGPSPTWLLDPTRLEE--------EHSEAGLTVALMPVLNQVAGLLGSGEGGQTESWTDAVRLGLEGCQRLYPVLQQCLV 260
BLAST of EMLSAG00000003990 vs. GO
Match: - (symbol:mtr3 "exosomal 3'-5' exoribonuclease, PH-like Mtr3" species:4896 "Schizosaccharomyces pombe" [GO:0000177 "cytoplasmic exosome (RNase complex)" evidence=ISO] [GO:0000176 "nuclear exosome (RNase complex)" evidence=ISO] [GO:0000175 "3'-5'-exoribonuclease activity" evidence=ISM] [GO:0000467 "exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO] [GO:0070651 "nonfunctional rRNA decay" evidence=ISO] [GO:0071042 "nuclear polyadenylation-dependent mRNA catabolic process" evidence=ISO] [GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic process" evidence=ISO] [GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic process" evidence=ISO] [GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay" evidence=ISO] [GO:0070481 "nuclear-transcribed mRNA catabolic process, non-stop decay" evidence=ISO] [GO:0034661 "ncRNA catabolic process" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0000178 "exosome (RNase complex)" evidence=IDA] InterPro:IPR015847 PomBase:SPBC211.08c Pfam:PF01138 INTERPRO:IPR001247 GO:GO:0005829 GO:GO:0005730 EMBL:CU329671 GO:GO:0003723 GO:GO:0071035 GO:GO:0071038 InterPro:IPR020568 SUPFAM:SSF54211 GO:GO:0000176 GO:GO:0000175 GO:GO:0070651 Gene3D:3.30.230.70 InterPro:IPR027408 SUPFAM:SSF55666 GO:GO:0000177 GO:GO:0000467 GO:GO:0071042 GO:GO:0070478 GO:GO:0070481 eggNOG:COG0689 HOGENOM:HOG000229515 KO:K12587 PIR:T50343 RefSeq:NP_596618.1 ProteinModelPortal:Q9P7R3 BioGrid:276940 MINT:MINT-4706146 STRING:4896.SPBC211.08c-1 EnsemblFungi:SPBC211.08c.1 GeneID:2540412 KEGG:spo:SPBC211.08c OMA:EYSTANE OrthoDB:EOG744TMG NextBio:20801539 PRO:PR:Q9P7R3 Uniprot:Q9P7R3) HSP 1 Score: 92.0485 bits (227), Expect = 1.781e-20 Identity = 73/222 (32.88%), Postives = 120/222 (54.05%), Query Frame = 0 Query: 48 RSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFAS---RDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVAT---AITAASLALSDASINLFDLAIGSSVRLHKK--RAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLI 261 R ++ ++G TK GS+Y E + K+ +V GPR K F S+ L+ E++ + F++ + EK+ S + + ++ LHLYPKS IDV+I V+E+DG A+AT AI+ AS A++DA+I+ DL GSSV + ++DP +E A+ G++V+GY SL + + + G + LS + I +AK+T +I L+ Sbjct: 36 RKIYLKLGWATKAVGSSYFESEKIKIACTVSGPRP-SKTFAFRSSAK-LNCEFRLSPFSTSVRQGHVQTVEEKSYSQMIEAAISPSILLHLYPKSSIDVYIQVIESDG-ALATLAAAISCASSAIADANIDCIDLVTGSSVLFNPNTDEYWIDPDYVDERARAA------KGSVVMGYMASLGHVTQVWERGTCSPSRLSFLTEKCIKNAKDTRLVINHALL 248
BLAST of EMLSAG00000003990 vs. GO
Match: - (symbol:Exosc4 "exosome component 4" species:10116 "Rattus norvegicus" [GO:0000178 "exosome (RNase complex)" evidence=IEA;ISO] [GO:0000460 "maturation of 5.8S rRNA" evidence=IEA;ISO] [GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0017091 "AU-rich element binding" evidence=IEA;ISO] [GO:0030307 "positive regulation of cell growth" evidence=IEA;ISO] [GO:0035327 "transcriptionally active chromatin" evidence=IEA;ISO] [GO:0045006 "DNA deamination" evidence=IEA;ISO] [GO:0051607 "defense response to virus" evidence=IEA;ISO] [GO:0071028 "nuclear mRNA surveillance" evidence=IEA;ISO] [GO:0071044 "histone mRNA catabolic process" evidence=IEA;ISO] [GO:0004532 "exoribonuclease activity" evidence=ISO] InterPro:IPR015847 Pfam:PF01138 RGD:1310986 INTERPRO:IPR001247 GO:GO:0005634 GO:GO:0030307 GO:GO:0051607 GO:GO:0017091 GO:GO:0000178 InterPro:IPR020568 SUPFAM:SSF54211 GO:GO:0035327 GO:GO:0071044 GO:GO:0000460 Gene3D:3.30.230.70 InterPro:IPR027408 Pfam:PF03725 SUPFAM:SSF55666 GO:GO:0071028 GO:GO:0045006 CTD:54512 GeneTree:ENSGT00550000074804 KO:K11600 OMA:DITLLQM OrthoDB:EOG74J98C TreeFam:TF313915 EMBL:AABR06051911 RefSeq:NP_001128332.1 UniGene:Rn.28481 PRIDE:D4A4Y0 Ensembl:ENSRNOT00000016464 GeneID:300045 KEGG:rno:300045 UCSC:RGD:1310986 NextBio:646189 Uniprot:D4A4Y0) HSP 1 Score: 91.6633 bits (226), Expect = 1.781e-20 Identity = 53/169 (31.36%), Postives = 88/169 (52.07%), Query Frame = 0 Query: 35 YRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFS-STTGILSVEYKETAFAS--RDTSDNSNEKN--ISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEE 198 YR+DG R + +R + +GV + GSAYIE+G TK +A V+GP EI+ + +++ +Y F++ R + + K+ + L L +T + + L+P+S+ID+++ VL+ DG A + AA+LA+ DA I + D S A D EE Sbjct: 12 YRIDGRRAGE--LRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRSRALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYVQVLQADGGTYAACVNAATLAVMDAGIPMRDFVCACSAGFVDGTALADLSHVEE 178
BLAST of EMLSAG00000003990 vs. GO
Match: - (symbol:EXOSC4 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000178 "exosome (RNase complex)" evidence=IEA] [GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0030307 "positive regulation of cell growth" evidence=IEA] [GO:0035327 "transcriptionally active chromatin" evidence=IEA] [GO:0045006 "DNA deamination" evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA] [GO:0071028 "nuclear mRNA surveillance" evidence=IEA] [GO:0071044 "histone mRNA catabolic process" evidence=IEA] InterPro:IPR015847 Pfam:PF01138 INTERPRO:IPR001247 GO:GO:0005634 GO:GO:0030307 GO:GO:0051607 GO:GO:0017091 GO:GO:0000178 InterPro:IPR020568 SUPFAM:SSF54211 GO:GO:0035327 GO:GO:0071044 GO:GO:0000460 Gene3D:3.30.230.70 InterPro:IPR027408 Pfam:PF03725 SUPFAM:SSF55666 GO:GO:0071028 GO:GO:0045006 CTD:54512 GeneTree:ENSGT00550000074804 KO:K11600 OMA:DITLLQM OrthoDB:EOG74J98C TreeFam:TF313915 EMBL:AAEX03008955 RefSeq:XP_539207.1 Ensembl:ENSCAFT00000002371 GeneID:482086 KEGG:cfa:482086 NextBio:20856762 Uniprot:E2RIM3) HSP 1 Score: 91.6633 bits (226), Expect = 1.798e-20 Identity = 53/169 (31.36%), Postives = 88/169 (52.07%), Query Frame = 0 Query: 35 YRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQ-KKLDFSSTTGILSVEYKETAFAS--RDTSDNSNEKN--ISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEE 198 YR+DG R + +R + +GV + GSAYIE+G TK +A V+GP EI+ + +++ +Y F++ R + + K+ + L L +T + + L+P+S+ID+++ VL+ DG A + AA+LA+ DA I + D S A D EE Sbjct: 12 YRVDGRRAGE--LRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRARALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLHLRQTFEAAILTQLHPRSQIDIYVQVLQADGGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDNTALADLSHVEE 178
BLAST of EMLSAG00000003990 vs. C. finmarchicus
Match: gi|592922231|gb|GAXK01036158.1| (TSA: Calanus finmarchicus comp109283_c1_seq1 transcribed RNA sequence) HSP 1 Score: 80.8777 bits (198), Expect = 1.185e-17 Identity = 58/141 (41.13%), Postives = 81/141 (57.45%), Query Frame = 0 Query: 118 NISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGXXXXXXXXXXXXXXXXXXXNLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQE 258 + + + E L STVCLH YPKS I+VF+TV+E+DG VA A+TAA LAL+DA I +FD+ +GS V L +K VDP + E+ Y PSLEQ+VA + +G+M L+ + A LP +Q+ Sbjct: 1 ELGMVVGEALSSTVCLHRYPKSAIEVFVTVIEDDGGVVAAALTAAGLALADAGIQMFDIVVGSKVSLTRKEVVVDPDRHEQYGVEGGEVVGEVTVG---YLPSLEQVVACMCEGVMQTEDLARGLAAATQQAAIVLPAVQQ 414
BLAST of EMLSAG00000003990 vs. C. finmarchicus
Match: gi|592821970|gb|GAXK01132598.1| (TSA: Calanus finmarchicus comp27554_c0_seq1 transcribed RNA sequence) HSP 1 Score: 77.7962 bits (190), Expect = 4.338e-16 Identity = 42/122 (34.43%), Postives = 71/122 (58.20%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQ-KKLDFSSTTGILSVEYKETAFAS----RDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDG 152 RLDG K +R L C +GV + GSAY+E+G TKV+A+V+GP +++ +L +++ +Y F++ R + + +S L +T +T+ LYP+S+ID+F+ VL+ DG Sbjct: 76 RLDGR--KAGELRRLQCRMGVYGQADGSAYLEQGNTKVLAAVYGPHDMRDSRLRALHDRVVVNCQYSMAVFSTGERKRRPRGDRKSQEMSQHLKQTFEATIKTELYPRSQIDIFVEVLQADG 435
BLAST of EMLSAG00000003990 vs. C. finmarchicus
Match: gi|592824227|gb|GAXK01130341.1| (TSA: Calanus finmarchicus comp71087_c0_seq1 transcribed RNA sequence) HSP 1 Score: 73.9442 bits (180), Expect = 1.842e-15 Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = 0 Query: 7 DFRRFQSPSDAKDYRIFLKNENKGEKDKYRLDGE---RLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFA 106 D RR P + Y + + K +KDK L R DS R +F GV+++ KGSAYIE+G+TKV+ VFGPRE+Q++ DF S G+L+ E K FA Sbjct: 46 DSRRIVGPETSVPYTAY---QAKSDKDKLDLANRSEGRAVDSH-RKIFLSTGVISQAKGSAYIEQGRTKVMVGVFGPREVQRRSDF-SMAGVLTAELKFAPFA 339
BLAST of EMLSAG00000003990 vs. C. finmarchicus
Match: gi|592849994|gb|GAXK01107550.1| (TSA: Calanus finmarchicus comp37728_c0_seq1 transcribed RNA sequence) HSP 1 Score: 46.2098 bits (108), Expect = 4.836e-5 Identity = 27/110 (24.55%), Postives = 52/110 (47.27%), Query Frame = 0 Query: 43 KDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDG 152 K S+R +FC +G +T+ GS + +G T V +V+GP E++ T ++ E F R +K + T + + L+P++ I + + +++DG Sbjct: 386 KTPSLRPMFCSLGEITRGDGSVILCQGDTTVACAVYGPGEVRV------TKELIDQAVVEVVFKPRMGMPGVADKAREGMIQSTCTAAILTLLHPRTSISINLQEMQDDG 697
BLAST of EMLSAG00000003990 vs. C. finmarchicus
Match: gi|592777499|gb|GAXK01177069.1| (TSA: Calanus finmarchicus comp141341_c4_seq11 transcribed RNA sequence) HSP 1 Score: 32.7278 bits (73), Expect = 1.485e+0 Identity = 16/41 (39.02%), Postives = 25/41 (60.98%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIAS 76 R+DG L D +R + C+V + GSA +RGQT+V+ + Sbjct: 328 RVDGRGLTD--IRPISCQVNLHDPLHGSALFQRGQTQVMCT 444
BLAST of EMLSAG00000003990 vs. C. finmarchicus
Match: gi|592777507|gb|GAXK01177061.1| (TSA: Calanus finmarchicus comp141341_c4_seq3 transcribed RNA sequence) HSP 1 Score: 32.7278 bits (73), Expect = 1.588e+0 Identity = 16/41 (39.02%), Postives = 25/41 (60.98%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIAS 76 R+DG L D +R + C+V + GSA +RGQT+V+ + Sbjct: 328 RVDGRGLTD--IRPISCQVNLHDPLHGSALFQRGQTQVMCT 444
BLAST of EMLSAG00000003990 vs. C. finmarchicus
Match: gi|592777508|gb|GAXK01177060.1| (TSA: Calanus finmarchicus comp141341_c4_seq2 transcribed RNA sequence) HSP 1 Score: 32.7278 bits (73), Expect = 1.595e+0 Identity = 16/41 (39.02%), Postives = 25/41 (60.98%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIAS 76 R+DG L D +R + C+V + GSA +RGQT+V+ + Sbjct: 328 RVDGRGLTD--IRPISCQVNLHDPLHGSALFQRGQTQVMCT 444
BLAST of EMLSAG00000003990 vs. C. finmarchicus
Match: gi|592777509|gb|GAXK01177059.1| (TSA: Calanus finmarchicus comp141341_c4_seq1 transcribed RNA sequence) HSP 1 Score: 32.7278 bits (73), Expect = 1.616e+0 Identity = 16/41 (39.02%), Postives = 25/41 (60.98%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIAS 76 R+DG L D +R + C+V + GSA +RGQT+V+ + Sbjct: 328 RVDGRGLTD--IRPISCQVNLHDPLHGSALFQRGQTQVMCT 444
BLAST of EMLSAG00000003990 vs. L. salmonis peptides
Match: EMLSAP00000003990 (pep:novel supercontig:LSalAtl2s:LSalAtl2s213:385505:387237:1 gene:EMLSAG00000003990 transcript:EMLSAT00000003990 description:"maker-LSalAtl2s213-augustus-gene-3.21") HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0 Query: 1 MNKKQTDFRRFQSPSDAKDYRIFLKNENKGEKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEKLSEINTSS 275 MNKKQTDFRRFQSPSDAKDYRIFLKNENKGEKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEKLSEINTSS Sbjct: 1 MNKKQTDFRRFQSPSDAKDYRIFLKNENKGEKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEKLSEINTSS 275
BLAST of EMLSAG00000003990 vs. L. salmonis peptides
Match: EMLSAP00000003429 (pep:novel supercontig:LSalAtl2s:LSalAtl2s188:531000:531937:-1 gene:EMLSAG00000003429 transcript:EMLSAT00000003429 description:"maker-LSalAtl2s188-augustus-gene-5.17") HSP 1 Score: 88.1965 bits (217), Expect = 7.482e-21 Identity = 72/238 (30.25%), Postives = 109/238 (45.80%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLT-KCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTSDNSNEKNISLFLAETLRSTVCLH--LYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEKLSE 270 RLDG K +R L C +G + GSAY+E G +KV+A+V+GPRE + + S IL+V++ AF++ AE C+ LYP+S+ID+F+ VL+ D ++ AA+LAL A I L D S L K+ VD K E + +++ P +IV L M Q + +I A E I++ L ++ E LS+ Sbjct: 10 RLDGR--KSDELRRLRCRLGAFSWSADGSAYLEMGNSKVLAAVYGPREPRGVDNSSKEEAILNVQFSSAAFST----------------AERKERQPCIQTELYPRSQIDIFVEVLQTDCGHYCASVNAATLALIHAGIPLRDYVCACSASLIKETPLVDINKLESSLGGP--------ELILASLPKSGEIVHLE----MSQRFHMDHLDKVIDEALEGTRKIRDILDAAVREHLSK 217
BLAST of EMLSAG00000003990 vs. L. salmonis peptides
Match: EMLSAP00000011663 (pep:novel supercontig:LSalAtl2s:LSalAtl2s80:819418:829604:1 gene:EMLSAG00000011663 transcript:EMLSAT00000011663 description:"maker-LSalAtl2s80-augustus-gene-8.35") HSP 1 Score: 54.299 bits (129), Expect = 1.847e-8 Identity = 42/130 (32.31%), Postives = 64/130 (49.23%), Query Frame = 0 Query: 47 VRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQ---KKLDFSSTTGILSVEYKETAFASRDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINL 173 + LF E G+L+ GSA + +G T A+V GP E + K + T + E FAS KN+ F +E L+S + YP++ +++ E+DGS AT++ A LAL D+ I L Sbjct: 23 INDLFAESGILSAYDGSASLSQGGTLSYAAVSGPGEPRLSTKDRLYDQTVVDIYYRTHERDFAS---------KNLGTF-SECLKSGLIPTDYPRTGTALYLQQGEDDGSYSATSLNAGMLALMDSGIAL 142
BLAST of EMLSAG00000003990 vs. L. salmonis peptides
Match: EMLSAP00000006216 (pep:novel supercontig:LSalAtl2s:LSalAtl2s33:174650:179682:1 gene:EMLSAG00000006216 transcript:EMLSAT00000006216 description:"maker-LSalAtl2s33-snap-gene-1.26") HSP 1 Score: 52.7582 bits (125), Expect = 4.774e-8 Identity = 62/217 (28.57%), Postives = 101/217 (46.54%), Query Frame = 0 Query: 32 KDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASV-FGPREIQKKLDFSST-TGILS-----VEYKETAFASRDTSDNSNEKNISLFLA-------ETLRSTVCLHLYPKS---KIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEEND-GNIVIGYQPSLEQIVALLQD 230 +D R DG K +R+L CEVG+ GSA +RGQT+V+ +V E K D+ ST TG + + Y+ ++A+ + S + F+A L + L PK+ I + VLE++GS+ + SLAL DA +++ A G ++ L ++ D ++E + I +E+ GN+ + E I AL D Sbjct: 273 EDGLRPDGR--KPGEMRTLSCEVGLHAPLHGSALFQRGQTQVLCTVALDSIESSLKNDYMSTLTGGIKEKNFFLHYEFPSYATNEISRS--------FVAGRRELGHGALAEKALMPLIPKNYPFTIRLTSEVLESNGSSSMATVCGGSLALMDAGVDIKSPAAGVAIGLISRKH--DSNEEEHTLLLDIIGQEDYVGNMDFKIAGTSEGITALQLD 477
BLAST of EMLSAG00000003990 vs. SwissProt
Match: gi|123905166|sp|Q6P0I8.2|EXOS6_DANRE (RecName: Full=Exosome complex component MTR3; AltName: Full=Exosome component 6; AltName: Full=mRNA transport regulator 3 homolog) HSP 1 Score: 166.007 bits (419), Expect = 5.286e-49 Identity = 89/264 (33.71%), Postives = 148/264 (56.06%), Query Frame = 0 Query: 7 DFRRFQSPSDAKDYRIFLKNENKGEKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTS---DNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEK 267 D +R + P +++ +FL + +K K G R + VR +F G++++ KGSAYIE G TK+I SV+GP+E +++ + TG L +++ F+ S E+++S L E+LR VCLH YP+S+IDV + VLENDGS +A A+T AS+AL+DA I ++D+ +G ++R VDP EE +N G + + P+L Q+ L DG M + L+ ++ + + P++Q+ L ++ +K Sbjct: 4 DTKRIRGPEESQSPLLFL-SPDKAPKAPSSRQGVR-GNGDVRPVFARCGLVSQAKGSAYIEAGNTKIICSVYGPKETERRDETDMKTGRLVCDFRLAPFSCVKRGAWIQGSEERDLSATLMESLRPGVCLHRYPRSQIDVNVMVLENDGSVLAHAVTCASMALADAGIEMYDIVLGCTLRQSGNACLVDPSYAEECGSWQEGYGDNQGCVTLALLPNLNQVSGLNADGEMREDTLTEAMRTCMDGCHKLYPVVQQALTRAVKKK 265
BLAST of EMLSAG00000003990 vs. SwissProt
Match: gi|123892820|sp|Q28F19.1|EXOS6_XENTR (RecName: Full=Exosome complex component MTR3; AltName: Full=Exosome component 6; AltName: Full=mRNA transport regulator 3 homolog) HSP 1 Score: 122.094 bits (305), Expect = 4.856e-32 Identity = 78/271 (28.78%), Postives = 135/271 (49.82%), Query Frame = 0 Query: 7 DFRRFQSPSDAKDYRIFLKNENKGEKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQ--TKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTSDNS-----NEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSV-RLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEKLS 269 D RR + P +++ +++ +E G+ R G S R +F G+L++ KGSAY+E G TKV+ +V GPRE + + T G L + + F+ R S + + L L E+L V L YP++++ V++ VLE+ GSA+ A++ ASLAL+DA I +FDLA+G + R +DP EE + + G + + P+L Q+ L+ G ++ + + P++ +CL+++ K+ Sbjct: 4 DSRRIRGPEESQSPLLYVLSEEGGKAAGRRGRGP----SEPRPVFVRAGLLSQAKGSAYLEAGSGGTKVLCAVHGPRERGMGGERAETRGRLLCDLRWAPFSRRGPWSGSCPAGPSPRQAGLQLQESLEPAVRLDRYPRAEVIVWVLVLEDRGSALPAAVSCASLALADAGIEMFDLALGCGLSRGPGGELLLDPDDDEE-------EAGSGGTMSLSLLPTLNQVSGLISSGEWEGESSEEAVRLCMEGCQRLYPVLHQCLVKATKRKIP 263
BLAST of EMLSAG00000003990 vs. SwissProt
Match: gi|254782538|sp|B1Y978.1|RRP41_PYRNV (RecName: Full=Exosome complex component Rrp41) HSP 1 Score: 118.627 bits (296), Expect = 4.852e-31 Identity = 76/220 (34.55%), Postives = 113/220 (51.36%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRD----TSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKE 251 R DG R D +R + VGV++ GSA + G T +A+V+GPRE+ + G++ V Y F+++D + + E IS L E L V L YP+S+IDVFI +L+ DGS ++TAASLAL+DA I + DL IG SV L +D + D+ +G++ +GY P+L + L DG + L + NL + E Sbjct: 14 RADG-RAPDQ-MREVQISVGVISNADGSAMVSYGATTAVAAVYGPREMHPRHLSLPDRGVMRVRYHMAPFSTKDERKSPTPSRREIEISKVLREALEPAVMLEQYPRSRIDVFIEILQADGSTRVASLTAASLALADAGIYMRDLVIGVSVGLVDGTVVLD--------LNGLEDQYGEGDLPVGYMPNLRRYTLLQLDGAWGRDKLLEAL-NLAVKGAE 222
BLAST of EMLSAG00000003990 vs. SwissProt
Match: gi|254782537|sp|A1RST0.1|RRP41_PYRIL (RecName: Full=Exosome complex component Rrp41) HSP 1 Score: 117.472 bits (293), Expect = 1.309e-30 Identity = 70/200 (35.00%), Postives = 106/200 (53.00%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRD----TSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDG 231 R DG R D +R + VG+++ GSA + G T +A+V+GPRE+ + G++ V Y F+++D + E IS L E L V L YP+S+IDVFI +L+ DGS ++TAASLAL+DA + + DL IG SV L +D + D+ +G++ +GY P+L++ L DG Sbjct: 14 RADG-RAPDQ-MREVNITVGIVSNADGSAMVSYGATTAVAAVYGPREMHPRHLSLPDRGVMRVRYHMAPFSTKDERKSPTPTRREIEISKILREALEPAVVLEQYPRSRIDVFIEILQADGSTRVASLTAASLALADAGVYMRDLVIGVSVGLVDGAVVLD--------LNGLEDQYGEGDLPVGYMPNLKRFTLLQLDG 203
BLAST of EMLSAG00000003990 vs. SwissProt
Match: gi|980952448|sp|A2RVK7.1|RP41L_ARATH (RecName: Full=Exosome complex component RRP41-like; AltName: Full=Protein SLOWER GROWTH; AltName: Full=Ribosomal RNA-processing protein 41-like) HSP 1 Score: 115.546 bits (288), Expect = 1.077e-29 Identity = 75/231 (32.47%), Postives = 115/231 (49.78%), Query Frame = 0 Query: 33 DKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIES 263 D R DG R + G ++ GSAY E G TKVI SVFGPRE +K + +S G L+ T FAS ++ K S L + L + + +PK+ +DVF VLE+ GS ++ I+ ASLAL+DA I ++DL SV K +DP +EEG DG+ ++ PS +I L G ++ +Q + ++ + ++++CL +S Sbjct: 31 DWSRPDGRGFHQ--CRPALLQTGAVSSASGSAYAEFGNTKVIVSVFGPRESKKAMVYSDV-GRLNCNVSYTNFASPTLGQGTDHKEYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSDLSVLISCASLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCE--------DGSFMMTCMPSRYEITQLTITGEWTTPNINEAMQLCLDASSKLGEIMRDCLKQS 250
BLAST of EMLSAG00000003990 vs. SwissProt
Match: gi|259645400|sp|A9A5C9.1|RRP41_NITMS (RecName: Full=Exosome complex component Rrp41) HSP 1 Score: 110.538 bits (275), Expect = 6.568e-28 Identity = 73/235 (31.06%), Postives = 115/235 (48.94%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFA---SRDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEK 267 R DG + + R + + G L GS+YIE G K++ VFGPR++ K + TGIL V Y F+ ++ + + E IS + E L V L +P++ +DVFI VL+ DG A+TAAS+AL+DA I + D+ + +D +E D+ ++ IGY P+LE+I L DG++ IQ + K ++ E ++LN+K Sbjct: 17 RCDGRTVDEP--RRIMIKAGGLKNADGSSYIEFGDNKILVGVFGPRDVHPKHMSDTDTGILRVRYHMEPFSVGERKNPAPSRREIEISKVIKEALEPAVMLEKFPRTAVDVFIEVLQADGGTRCAALTAASVALADAGIPMRDMVAAIAAGKVADTVILDVNNEE--------DQAGQADMPIGYMPNLEKITLLQLDGVLTPEEYKKCIQVGVDGCK----LVYELQKKALNDK 237
BLAST of EMLSAG00000003990 vs. SwissProt
Match: gi|254782534|sp|A2BKC0.1|RRP41_HYPBU (RecName: Full=Exosome complex component Rrp41) HSP 1 Score: 110.153 bits (274), Expect = 1.289e-27 Identity = 81/254 (31.89%), Postives = 127/254 (50.00%), Query Frame = 0 Query: 27 ENKGEKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAF--ASRDT-SDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEEND----GNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEKLSEINT 273 E G+K R DG RL + +R + EVGVL+ GSA +E G T+VIA+V+GPRE + I+ Y F A R T + E +S + E L + V LYP++ IDV++ VL++DG AITAASLAL+DA I + DL G +V K +G+ DE D ++ + PSL++++ L +G++ ++ A++ + +I E+L +K E++ Sbjct: 16 ERDGQKVAIRHDG-RLPEQ-LRPIRMEVGVLSNADGSALVEYGGTRVIAAVYGPREAHPRHVALPDRAIIRCRYHMAPFSTAERKTPAPTRREVELSKVIREALEAVVISELYPRTAIDVYMEVLQSDGGTRTAAITAASLALADAGIAMRDLVAGVAV------------GKVDGVLVLDIDEIEDNYAEADMPVAMAPSLDKVLLLQLNGVLTHDEFVKALE----LARKGIQVIYNLQKEALRKKYVEVSV 251
BLAST of EMLSAG00000003990 vs. SwissProt
Match: gi|254782535|sp|A4WM67.1|RRP41_PYRAR (RecName: Full=Exosome complex component Rrp41) HSP 1 Score: 109.383 bits (272), Expect = 1.659e-27 Identity = 76/220 (34.55%), Postives = 113/220 (51.36%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRD----TSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKE 251 R DG RL D +R + VGV++ GSA + G T +A+V+GPRE+ + G++ V Y F+++D + + E IS L E L V L YP+S+IDVFI +++ DGS ++TAASLAL+DA I + DL +G SV L + D +G++ +GY P+L++ V L DG + V Q NL + E Sbjct: 14 RADG-RLPDQ-MREVKISVGVVSNADGSAMVSYGATTAVAAVYGPREMHPRHLSLPDRGVMRVRYHMAPFSTKDERKSPTPSRREIEISKVLREALEPAVLLEQYPRSRIDVFIEIIQADGSTRVASLTAASLALADAGIYMRDLVVGVSVGLV--------DGVVVLDLNGLEDNYGEGDLPVGYMPNLKRFVLLQLDGAWKREVF-LQALNLAVKGAE 222
BLAST of EMLSAG00000003990 vs. SwissProt
Match: gi|75206986|sp|Q9SP08.1|RRP41_ARATH (RecName: Full=Exosome complex component RRP41 homolog; AltName: Full=Ribosomal RNA-processing protein 41; Short=AtRRP41; Short=AtRrp41p) HSP 1 Score: 108.227 bits (269), Expect = 4.016e-27 Identity = 68/198 (34.34%), Postives = 105/198 (53.03%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKK-LDFSSTTGILSVEYKETAFASRDTSDNSNEKN---ISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQ 229 RLDG R + +R + EVGV++K GSA E G TKVIA+V+GPREIQ K + ++ EY F++ D ++ +SL + +T+ + + L P S+ID+F+ VL+ DG + I AA+LAL+DA I + DLA+ S +D + D ++ +G P L++ V+LLQ Sbjct: 10 RLDGRRFNE--MRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQKKNDHAVVLCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEACILTELMPHSQIDIFLQVLQADGGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLD--------LNYVEDSAGGADVTVGILPKLDK-VSLLQ 196
BLAST of EMLSAG00000003990 vs. SwissProt
Match: gi|363548435|sp|Q975G8.2|RRP41_SULTO (RecName: Full=Exosome complex component Rrp41) HSP 1 Score: 107.842 bits (268), Expect = 6.255e-27 Identity = 69/201 (34.33%), Postives = 106/201 (52.74%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFAS---RDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEEND----GNIVIGYQPSLEQIVALLQ 229 RLDG K +R + E+GVL GSA E G TKVIA+V+GP+E+ + +L V Y T F++ ++ + + E +S + E L ST+ + L+P++ IDVF+ VL+ D ++ AAS+AL+DA I + DL G +V K +G+ +E D ++ + PSL+Q VALLQ Sbjct: 16 RLDGR--KPDEMRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEMHPRHLALPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESTILVELFPRTVIDVFMEVLQADAGTRLVSLMAASMALADAGIPMRDLIAGVAV------------GKADGVLVLDLNEPEDMWGEADMPVAMMPSLKQ-VALLQ 201
BLAST of EMLSAG00000003990 vs. Select Arthropod Genomes
Match: EFX80662.1 (hypothetical protein DAPPUDRAFT_50975, partial [Daphnia pulex]) HSP 1 Score: 163.696 bits (413), Expect = 7.197e-49 Identity = 87/218 (39.91%), Postives = 134/218 (61.47%), Query Frame = 0 Query: 55 GVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFAS---RDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEKLS 269 G++++ KGSAYIE+G TK++ V+GPRE+QKK DFS G L E+K F+ R ++ E +S L E L + VCLH +PK++++V + V+ENDGS +A A+T ASLAL+ ASI ++DL IG+SVR K +DP K EE + +EN+ N+ +G+ PS Q+ A + +G+ L ++ + P++Q CL E++ + LS Sbjct: 4 GIISQAKGSAYIEQGNTKLVCGVYGPREVQKKSDFS-LNGQLFCEFKFAPFSCQKRRGHQQDNEELVLSGLLREALEAAVCLHKFPKAQVEVNVMVIENDGSPLAAALTCASLALASASIPMYDLMIGTSVRQIPKLFLLDPTKDEE-WQPELNHDENNSNLTVGFMPSTHQVSAYVHEGVSKTEDLEQMLKLATEYCLKVQPVVQLCLKETVEKILS 219
BLAST of EMLSAG00000003990 vs. Select Arthropod Genomes
Match: EAL38841.3 (AGAP011906-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 162.155 bits (409), Expect = 2.365e-47 Identity = 98/268 (36.57%), Postives = 149/268 (55.60%), Query Frame = 0 Query: 7 DFRRFQSPSDAKDYRIFLK-------NENKGE---KDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFAS--RDTSD-NSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLI 261 D +R P + YRI K +E E KD R DG RL++S R + ++GV++ KGSAY+E G TKVI SVF PREI K+ F G L + K + FA R T ++ E++++ L L +VC HL+P +IDVF VLE+DGSA+A AITAA LAL DA + +FD+ ++ + R +DP +EE + + EEN G +++ P+L+Q+ + Q G + +L + L + + +P++Q L+ Sbjct: 4 DTKRINGPEFTRSYRIHCKANAPKPFDERLQEALGKDGKRKDGRRLQES--RKYYAKIGVVSTAKGSAYVELGNTKVIVSVFDPREIPKQNKFCEL-GELFCDLKFSPFAPAVRKTHQTDARERSMTAALTSALNPSVCRHLFPNLQIDVFANVLEDDGSALAVAITAAGLALGDACVPMFDIVTAATAGVLGDRVVMDPTAEEEALCLAGHTEENHGLVMLAKLPTLDQVPEIWQYGFVDVELLWDTCKQLNAACGDLVPVVQHLLV 268
BLAST of EMLSAG00000003990 vs. Select Arthropod Genomes
Match: gb|EFA06035.2| (Exosome complex component MTR3-like Protein [Tribolium castaneum]) HSP 1 Score: 132.109 bits (331), Expect = 4.866e-36 Identity = 92/274 (33.58%), Postives = 146/274 (53.28%), Query Frame = 0 Query: 6 TDFRRFQSPSDAKDYRIFLKNENKGEKDKY---------RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFAS---RDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGI-HASITDEE--NDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESL 264 D +R P + Y++F K K K ++ R DG + R +F + GV+++ KGSAYIE QTKVI SVF PREI K D+SS G + E+K F+ R ++ E+ S + + L S V H +P ++D++ VL NDG+A++ AITAA +AL+ A I ++DL ++ + VDP +EE + + EE N G +V+ + EQI Q G + LSS I+ L +AK+ + ++++CL++ + Sbjct: 3 VDHKRINGPEISIPYQLFDKLNTKSLKTQFSEIVQPNGTRADGR--TSTEHRKIFLKTGVVSQAKGSAYIELDQTKVIVSVFDPREIPNKTDYSSK-GEIYCEFKFAPFSCHKRRLHQQDAEEQQFSAIMKQALESAVFRHEFPNFQVDIYAMVLHNDGAALSAAITAAGVALAHAGIPMYDLITSVTLAVQGNHLLVDPTLEEERLCQVPLFKEEENNHGIVVLSVLATHEQISQFYQSGYLSYACLSSGIEMLTNAAKDIVTLVKKCLVKHV 273
BLAST of EMLSAG00000003990 vs. Select Arthropod Genomes
Match: EEB20370.1 (conserved hypothetical protein [Pediculus humanus corporis]) HSP 1 Score: 130.954 bits (328), Expect = 1.023e-35 Identity = 90/280 (32.14%), Postives = 156/280 (55.71%), Query Frame = 0 Query: 7 DFRRFQSPSDAKDYRIFLKNENKG---------EKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTSDNS---NEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEEND--GNIVIGYQPSLEQIVALLQDG-IMXQTVLSSQIQNLIISAKETLP-MIQECLIESLNEKLSE 270 D RR Q P+D++ Y+ F+ + K + +K R DG +D R ++ + GV+T+ KGSAY+E TKV+ SVF PREI + +F+ G + E+K F + + EK++S+ L +L VC H +P ++DV+ +L+NDGS ++ AITAA LAL+DA I ++D+ ++ +H F+DP +EE S + G I + Y P + Q+ + Q G + T+L S +L+IS +T+ + ++CL++++ ++++ Sbjct: 4 DLRRLQVPTDSESYQHFVLKDVKDYESTLREILDNNKIRKDGRTFEDQ--RKIYMKTGVVTQAKGSAYLELNNTKVLVSVFEPREIPRLSEFTPN-GEIYCEFKFAPFYGLERKGHIMDLEEKDLSIILKRSLEPAVCRHEFPNFQVDVYALLLDNDGSCLSAAITAAGLALADAGIPMYDILTSVTLGIHNDMIFIDPNFEEEKFCKSFFKNKTSEIGIISLSYMPEMAQVTEITQSGTVSINTILKS--MDLLISKCKTISDLTKKCLMDNVMNQITD 278
BLAST of EMLSAG00000003990 vs. Select Arthropod Genomes
Match: XP_006572022.1 (PREDICTED: exosome complex component MTR3-like isoform X1 [Apis mellifera]) HSP 1 Score: 124.02 bits (310), Expect = 4.329e-33 Identity = 87/271 (32.10%), Postives = 143/271 (52.77%), Query Frame = 0 Query: 7 DFRRFQSPSDAKDYRIFLKNENKGEKDK--YRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRD---TSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETL--------PMIQECLIESL 264 D RR P + Y I+ K +K K + + ++ ++ +R +F + G++++ KGSAYIE G TKV+ SVF PRE+ + + S G + E+K F+ + ++ EK SL L L VCLH +P ++DV+ VL+N GS++A AI AAS AL++A + +F L S++ ++ +DP EE I + D ++D N I SL Q + + ++ S N II A E L P++Q+CL++++ Sbjct: 4 DQRRINGPDVSIPYYIYSNLNKKSDKIKHDFNIRNDKRSNNEMRKIFLKTGIVSQAKGSAYIELGNTKVVCSVFDPRELSNRNGYCSQ-GEIYCEFKFAPFSCQKRKIHQQDAEEKQYSLILQRALEPAVCLHEFPNFQVDVYAMVLDNAGSSLAAAIMAASTALANAGVPMFGLVTASTIGIYDNHYLMDPTDTEEVICNTQPDNQDDFNHGIITLASLAQ-----HNQVSEVFLIGSIDTNSIIQATEILTTVNKDICPVLQQCLVKTI 268
BLAST of EMLSAG00000003990 vs. Select Arthropod Genomes
Match: XP_623498.2 (PREDICTED: exosome complex component MTR3-like isoform X2 [Apis mellifera]) HSP 1 Score: 111.309 bits (277), Expect = 2.430e-28 Identity = 84/271 (31.00%), Postives = 140/271 (51.66%), Query Frame = 0 Query: 7 DFRRFQSPSDAKDYRIFLKNENKGEKDK--YRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRD---TSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETL--------PMIQECLIESL 264 D RR P + Y I+ K +K K + + ++ ++ +R +F + G++++ KGSAYIE G TKV+ SVF PRE+ + + S G + E+K F+ + ++ EK SL L L H +P ++DV+ VL+N GS++A AI AAS AL++A + +F L S++ ++ +DP EE I + D ++D N I SL Q + + ++ S N II A E L P++Q+CL++++ Sbjct: 4 DQRRINGPDVSIPYYIYSNLNKKSDKIKHDFNIRNDKRSNNEMRKIFLKTGIVSQAKGSAYIELGNTKVVCSVFDPRELSNRNGYCSQ-GEIYCEFKFAPFSCQKRKIHQQDAEEKQYSLILQRALEPA---HEFPNFQVDVYAMVLDNAGSSLAAAIMAASTALANAGVPMFGLVTASTIGIYDNHYLMDPTDTEEVICNTQPDNQDDFNHGIITLASLAQ-----HNQVSEVFLIGSIDTNSIIQATEILTTVNKDICPVLQQCLVKTI 265
BLAST of EMLSAG00000003990 vs. Select Arthropod Genomes
Match: gb|EEC02983.1| (exosomal 3'-5' exoribonuclease complex, subunit Rrp41, putative [Ixodes scapularis]) HSP 1 Score: 101.679 bits (252), Expect = 7.943e-25 Identity = 64/201 (31.84%), Postives = 106/201 (52.74%), Query Frame = 0 Query: 33 DKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGIL-SVEYKETAFAS----RDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDG-NIVIGYQPSLEQIVAL 227 + YRLDG K + R + C +GV ++ GSAYIE+G KV+A+V+GP E + + +L + ++ F++ R + + ++L + +T +T+ LYP+S+ID+F+ VL++DG ++ + AA+LAL DA I L D SV F+D + S +E N G + + P +QIV L Sbjct: 10 EGYRLDGR--KPNEQRKIDCRLGVFSQADGSAYIEQGNAKVLAAVYGPHEPRGNRSRALHDRVLVNCQFSMATFSTFERKRRPRGDKKSQEMTLHIQQTFEATILTQLYPRSQIDIFVEVLQSDGGTLSVCVNAATLALIDAGIALKDYVCACSV------GFIDGVPL---VDISSIEESNRGPELTVAVLPKSQQIVLL 199
BLAST of EMLSAG00000003990 vs. Select Arthropod Genomes
Match: AGB92972.1 (Ski6, isoform B [Drosophila melanogaster]) HSP 1 Score: 100.138 bits (248), Expect = 2.766e-24 Identity = 54/155 (34.84%), Postives = 93/155 (60.00%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAF--ASRDTSDNSNEKNIS--LFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHK 186 RLDG R + +R + C++GV + GSAY+E+G TKV+A+V+GP + + + T +++ +Y + F A R + K++ L+L + L + + LYP+S+ID+++ VL++DG+ A A+ AA+LAL DA I L + + + L K Sbjct: 14 RLDGRRPHE--LRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKG----NQTESVINCQYSQATFSTAERKNRPRGDRKSLEFKLYLQQALSAAIKSELYPRSQIDIYVEVLQDDGANYAVALNAATLALIDAGICLNEFIVACTASLSK 162
BLAST of EMLSAG00000003990 vs. Select Arthropod Genomes
Match: AAF53263.1 (Ski6, isoform A [Drosophila melanogaster]) HSP 1 Score: 100.138 bits (248), Expect = 2.766e-24 Identity = 54/155 (34.84%), Postives = 93/155 (60.00%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAF--ASRDTSDNSNEKNIS--LFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHK 186 RLDG R + +R + C++GV + GSAY+E+G TKV+A+V+GP + + + T +++ +Y + F A R + K++ L+L + L + + LYP+S+ID+++ VL++DG+ A A+ AA+LAL DA I L + + + L K Sbjct: 14 RLDGRRPHE--LRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKG----NQTESVINCQYSQATFSTAERKNRPRGDRKSLEFKLYLQQALSAAIKSELYPRSQIDIYVEVLQDDGANYAVALNAATLALIDAGICLNEFIVACTASLSK 162
BLAST of EMLSAG00000003990 vs. Select Arthropod Genomes
Match: EEB10650.1 (Exosome complex exonuclease RRP41, putative [Pediculus humanus corporis]) HSP 1 Score: 99.7525 bits (247), Expect = 4.781e-24 Identity = 51/143 (35.66%), Postives = 87/143 (60.84%), Query Frame = 0 Query: 36 RLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFAS-----RDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINL 173 RLDG R S +R + C++GV ++ GSAYIE G TKV+A+V+GP +++ + +++ +Y F++ R D +++ S+ L + L + + LYPKS+ID+F+ VL++DG + + A+ ++LAL DA I L Sbjct: 11 RLDGRR--ASELRQIRCKLGVFSQPDGSAYIEMGNTKVLAAVYGPHQVRGRTKPLLDAAVINCQYSSAVFSTEERKKRPRGDKKSQEK-SMHLCQALSAAIKTELYPKSQIDIFVEVLQSDGGSFSAAVNVSTLALIDAGIPL 150
BLAST of EMLSAG00000003990 vs. nr
Match: gi|225708764|gb|ACO10228.1| (Exosome complex exonuclease MTR3 [Caligus rogercresseyi]) HSP 1 Score: 338.576 bits (867), Expect = 3.285e-114 Identity = 183/276 (66.30%), Postives = 222/276 (80.43%), Query Frame = 0 Query: 1 MNKKQTDFRRFQSPSDAKDYRIFL-KNENKGEKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASR-DTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITD-EENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEKLSEINT 273 MNK D RRF P DAKDYR++ K +N K +YRLDGER KD SVR LFCEVG+LT+ KGSAY+ERG+TKV+ASVFGPRE+ KKLDFSST G L+VEYKE FASR D + E+++ LFLA+TLRSTVCLHLYPKS+IDV ITVLE+DGSA+ TAITAA+LALSDASINLFDL IG+SV+L +A PCK EEGI A ++ EEN G+I+IGYQPSLEQI ALLQDG++ + LSSQ+++LI +A+ TLP +QECL+ SL+EKL E+NT Sbjct: 1 MNKPLVDSRRFTLPPDAKDYRVYSSKKDNASSKSQYRLDGEREKDISVRPLFCEVGILTQSKGSAYLERGRTKVLASVFGPREVSKKLDFSSTAGSLNVEYKEAPFASRSDGRGEAKERDVGLFLAQTLRSTVCLHLYPKSRIDVCITVLEDDGSAIPTAITAAALALSDASINLFDLVIGASVKLCGGKALSYPCKAEEGIQAHGSNAEENQGHIIIGYQPSLEQIAALLQDGVLESSALSSQMRSLIKAAEATLPSVQECLMRSLSEKLKEMNT 276
BLAST of EMLSAG00000003990 vs. nr
Match: gi|225719528|gb|ACO15610.1| (Exosome complex exonuclease MTR3 [Caligus clemensi]) HSP 1 Score: 333.569 bits (854), Expect = 2.399e-112 Identity = 170/259 (65.64%), Postives = 205/259 (79.15%), Query Frame = 0 Query: 1 MNKKQTDFRRFQSPSDAKDYRIFLKNEN----KGEKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTSDN-----SNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAK 250 M+K D + FQ P +KDYR F ++ K + +KYR DGER KDSSVR LFCEVGVLT+CKGSAYIERG+TKVIASVFGPRE+ KKLDFSSTTGILSVEY ET F+S ++ + + +KNISLFLA+T RSTVCLHLYPKS+ID+FITVLENDGSA+ TAITA +LALSDASINLFDL IG+SV++ +A +DPCK EE + E+N GNI+IGYQPSLEQI ALLQDG++ Q+VLS+QI++LI AK Sbjct: 1 MSKSIMDSKCFQCPPQSKDYRDFWSRKSDSSKKNKNNKYRPDGERDKDSSVRPLFCEVGVLTQCKGSAYIERGRTKVIASVFGPREVNKKLDFSSTTGILSVEYCETPFSSSSSNRSSKSPSNEDKNISLFLAQTFRSTVCLHLYPKSRIDIFITVLENDGSAIPTAITAGALALSDASINLFDLVIGASVKMSLGKALIDPCKAEEEVGDMEDAEDNRGNIIIGYQPSLEQIAALLQDGVLEQSVLSAQIRDLIKVAK 259
BLAST of EMLSAG00000003990 vs. nr
Match: gi|676493138|ref|XP_009066142.1| (hypothetical protein LOTGIDRAFT_236786 [Lottia gigantea] >gi|556094539|gb|ESO83192.1| hypothetical protein LOTGIDRAFT_236786 [Lottia gigantea]) HSP 1 Score: 191.045 bits (484), Expect = 1.997e-56 Identity = 108/268 (40.30%), Postives = 162/268 (60.45%), Query Frame = 0 Query: 6 TDFRRFQSPSDAKDYRIFLKNENKGEKDKYRLDGERL---KDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFAS---RDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEK 267 D +R P K+ FL N N EK + ++G+R K R LF G++++ KGSAYIE+ TKVI +V+GPRE+ +K DFS G ++ E+K F+ R +S EK+ S+ L E L V L +PKS++++++TVL+NDGSA+A +IT ASLAL+ A I +FDL +GSSVR+H VDPC++EE H++ ++G +V+G PS+ QI AL G + S ++ I + ++ P++Q CL+ SL EK Sbjct: 3 VDSKRICGPEITKNPYNFLINGN--EKGELIINGKRRDGRKPDQARPLFLRPGLISQAKGSAYIEQNHTKVICAVYGPREVIRKEDFS-MKGQITCEFKFATFSCKKKRGHQQDSEEKDYSVQLLEALEPAVQLDKFPKSQVNLYLTVLQNDGSALAASITCASLALAHAGIEMFDLVVGSSVRIHGNEILVDPCEEEE-FHSNTNIGVDEGGVVLGLMPSINQISALTSKGELNFDTTSQAVKTCIQNCQKVYPVLQNCLVNSLKEK 266
BLAST of EMLSAG00000003990 vs. nr
Match: gi|899147354|ref|NP_001297896.1| (exosome complex component MTR3 [Esox lucius] >gi|225715750|gb|ACO13721.1| Exosome complex exonuclease MTR3 [Esox lucius]) HSP 1 Score: 184.496 bits (467), Expect = 1.063e-53 Identity = 100/269 (37.17%), Postives = 161/269 (59.85%), Query Frame = 0 Query: 7 DFRRFQSPSDAKDYRIFL----KNENKGEKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTS---DNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEE-GIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEK 267 D +R + P ++ +FL N++ +KD R+DG + VRS+F G++++ KGSAYIE G TK+I V+GPRE+++K + +G L + + F+ R+ S+EK++SL L E+LR VCLH YP+S+I+V + VLENDGS +A A+T AS+AL+DA I ++DL +G S+R +DP EE G + + +N G++ + + PSL QI L DG M + +L+ ++ I + P+IQ+ L +++ K Sbjct: 4 DTKRVRGPEVSQSPSLFLCKTAANKSFTQKDA-RVDGRQRGQVDVRSVFVRCGLISQAKGSAYIEAGNTKLICCVYGPREMERKDETDMKSGRLMTDMRFAPFSCRERGSWIQGSDEKDLSLMLLESLRPGVCLHKYPRSQIEVNVMVLENDGSVLAHAVTCASMALADAGIEMYDLVLGCSIRQESATYLIDPTYLEENGCNLASGSGDNFGSLTVAFLPSLNQISGLQSDGEMGEDILTGGVRTCIEGCFKLYPVIQQALTKAVRRK 271
BLAST of EMLSAG00000003990 vs. nr
Match: gi|1022774025|gb|KZS18063.1| (Exosome complex exonuclease MTR3 [Daphnia magna]) HSP 1 Score: 184.111 bits (466), Expect = 2.265e-53 Identity = 100/279 (35.84%), Postives = 158/279 (56.63%), Query Frame = 0 Query: 6 TDFRRFQSPSDAKDYRIFLKNENKGEKDKYRLDGERL------------KDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFAS---RDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEKLS 269 D RR Q P A Y + K + E+ D +++ K + R LF G++++ KGSAYIE+G TK++ V+GPRE+QKK DF G L E+K F+ R ++ E +S L E L + VCLH +PK++++V I V+ENDGS +A A+T ASLAL+ ASI ++DL IG++VR K +DP K+EE + +EN+ N+ +G+ PS++QI A + +G+ L ++ + + P++Q CL E++ + L+ Sbjct: 3 VDSRRLQGPESAFSYTLLKKKDANAEESVLSADLQKMLIGSNQVRKDKRKPTDARPLFLRTGIISQAKGSAYIEQGNTKLVCGVYGPREVQKKSDFR-LNGQLFCEFKFAPFSCQKRRSHQQDNEELVLSGLLREALEAAVCLHHFPKAQVEVNIMVIENDGSPLAAALTCASLALASASIPMYDLVIGTAVRQLPKLLLLDPTKEEEW-QPKLNHDENNSNLTVGFMPSMQQICAYVHEGVSNPEELEQMLKLVTEYCLKVQPVVQLCLKETIEKMLA 279
BLAST of EMLSAG00000003990 vs. nr
Match: gi|942365293|gb|JAN64576.1| (Exosome complex component MTR3 [Daphnia magna]) HSP 1 Score: 183.341 bits (464), Expect = 4.372e-53 Identity = 100/279 (35.84%), Postives = 157/279 (56.27%), Query Frame = 0 Query: 6 TDFRRFQSPSDAKDYRIFLKNENKGEKDKYRLDGERL------------KDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFAS---RDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEKLS 269 D RR Q P A Y + K + E+ D +++ K + R LF G++++ KGSAYIE+G TK++ V+GPRE+QKK DF G L E+K F+ R ++ E +S L E L + VCLH +PK++++V I V+ENDGS +A A+T ASLAL+ ASI ++DL IG++VR K +DP K EE + +EN+ N+ +G+ PS++QI A + +G+ L ++ + + P++Q CL E++ + L+ Sbjct: 3 VDSRRLQGPESAFSYTLLKKKDANAEESVLSADLQKMLIGSNQVRKDKRKPTDARPLFLRTGIISQAKGSAYIEQGNTKLVCGVYGPREVQKKSDFR-LNGQLFCEFKFAPFSCQKRRSHQQDNEELVLSGLLREALEAAVCLHHFPKAQVEVNIMVIENDGSPLAAALTCASLALASASIPMYDLVIGTAVRQLPKLLLLDPTKDEEW-QPKLNHDENNSNLTVGFMPSMQQICAYVHEGVSNPEELEQMLKLVTEYCLKVQPVVQLCLKETIEKMLA 279
BLAST of EMLSAG00000003990 vs. nr
Match: gi|919089129|ref|XP_013381571.1| (PREDICTED: exosome complex component MTR3-like [Lingula anatina]) HSP 1 Score: 179.874 bits (455), Expect = 2.427e-52 Identity = 91/227 (40.09%), Postives = 149/227 (65.64%), Query Frame = 0 Query: 47 VRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFAS---RDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEKLSE 270 VR +F + GV+++ KGSAY+E +TK++ +V+GPR+++++ DFS G L+ E+K F+ R ++ EK+ S+ L E L V L +PK+K+D+F+TVLE+DGS+++ AITAAS+AL+DA I ++DL +G+++R + K +DPC EE E N G+I +G PS+ Q+ AL G + Q + I+ I + ++ P++QECLI+S+ +KL+E Sbjct: 13 VRPIFLKSGVISQAKGSAYLEMDKTKIMCAVYGPRQVRRE-DFS-LQGQLTCEFKFLTFSCKYRRQHQQDNQEKDYSVILLEALEPAVRLEKFPKAKLDIFVTVLEDDGSSLSGAITAASVALADAGIEMYDLVVGAALRQNGKMVLMDPCGPEEYRPERAPAEVNQGSITVGLMPSMHQVAALALRGELDQQTTAKGIKLCIETCQKIYPVVQECLIQSVKKKLAE 237
BLAST of EMLSAG00000003990 vs. nr
Match: gi|919031027|ref|XP_013399149.1| (PREDICTED: exosome complex component MTR3-like [Lingula anatina]) HSP 1 Score: 181.03 bits (458), Expect = 2.622e-52 Identity = 101/271 (37.27%), Postives = 166/271 (61.25%), Query Frame = 0 Query: 7 DFRRFQSPSDAKDYRIFLKNENKG----EKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFAS---RDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEKLSE 270 D RR P +++ + F K+ + + R DG R D VR +F + GV+++ KGSAY+E +TK++ +V+GPR+++++ DFS G L+ E+K F+ R ++ EK+ S+ L E L V L +PK+K+D+F+TVLE+DGS+++ AITAAS+AL+DA I ++DL +G+++R + K +DPC EE E N G+I +G PS+ Q+ AL G + Q + I+ I + ++ P++QECLI+S+ +K +E Sbjct: 4 DTRRIPCPEESRSFYDFEKDTKETVALVNEHNQRNDG-RGPDQ-VRPIFLKSGVISQAKGSAYLEMDKTKIMCAVYGPRQVRRE-DFS-LQGQLTCEFKFLTFSCKYRRQHQQDNQEKDYSVILLEALEPAVRLEKFPKAKLDIFVTVLEDDGSSLSGAITAASVALADAGIEMYDLVVGAALRQNGKMVLMDPCGPEEYRPERGPAEVNQGSITVGLMPSMHQVAALALRGELDQQTTAKGIKLCIETCQKIYPVVQECLIQSVKKKFAE 270
BLAST of EMLSAG00000003990 vs. nr
Match: gi|1073711395|gb|JAT98625.1| (putative mtr3 subunit of eukaryotic exosome, partial [Amblyomma aureolatum]) HSP 1 Score: 181.03 bits (458), Expect = 3.024e-52 Identity = 97/265 (36.60%), Postives = 155/265 (58.49%), Query Frame = 0 Query: 13 SPSDAKDYRIFLKNE-----NKGEKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFAS---RDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITD-EENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEKL 268 P +AK Y ++ K E N G+ R DG + D +R +F + GV+++ KGSAY+E G TKV+ SV+GPREI ++ DF+ G ++ E++ ++ R ++ + S L E L VCLH +PKS +DVF+ VLENDG +A+AIT A LAL+DA I+++D+ +G S+R +DP EE + + G + +G+ P+L+Q+ AL+QDG + + S ++ LI + E P++Q L++ + EKL Sbjct: 3 GPENAKSYVLYQKRESTLLDNSGK----RHDGRQFGD--IRPMFLKTGVVSQAKGSAYVEIGNTKVLCSVYGPREIARRKDFT-YKGQINCEFRFAQYSCQVRRQHMNDGEALHFSQLLEEALAPVVCLHKFPKSTVDVFVYVLENDGGVMASAITTAGLALADAGIDMYDVVVGCSLRQDGSTCLLDPTYNEETAPVGLENIGRGFGRMTLGFMPALQQVAALVQDGDLDAATVVSDLKALINACHEIYPLVQGVLLKDVEEKL 260
BLAST of EMLSAG00000003990 vs. nr
Match: gi|642106470|emb|CDQ73561.1| (unnamed protein product [Oncorhynchus mykiss]) HSP 1 Score: 177.178 bits (448), Expect = 8.078e-51 Identity = 100/269 (37.17%), Postives = 156/269 (57.99%), Query Frame = 0 Query: 6 TDFRRFQSPSDAKDYRIFL-KNENKGE--KDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFASRDTS---DNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEE-GIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEK 267 TD +R + P ++ +FL KN K + R+DG + VRS+F G++++ KGSAYIE G TK+I V+GPRE ++K + +G L + + F+ R+ S+EK++SL L E+LR VCL YP+S+I+V + VLENDG+ +A A+T AS+AL DA I ++DL +G S+R +DP EE G + + EN G++ + + PSL QI L DG M + L+ ++ I + P+IQ+ L +++ K Sbjct: 3 TDTKRVRGPEVSQSPSLFLCKNAVKKSTASNDARVDGRQRGQVDVRSVFVRCGLISQAKGSAYIEAGNTKLICCVYGPRETERKDETDMKSGRLITDMRFAPFSCRERGSWIQGSDEKDLSLMLLESLRPGVCLQKYPRSQIEVNVMVLENDGAVLAHAVTCASMALVDAGIEMYDLVLGCSIRQEGATYLIDPTFLEENGYNLASGSRENLGSLTVAFLPSLNQISGLQSDGEMGEDTLTGGVRTCIEGCFKLYPVIQQALSKAVRRK 271
BLAST of EMLSAG00000003990 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold14_size734282-snap-gene-6.24 (protein:Tk11307 transcript:maker-scaffold14_size734282-snap-gene-6.24-mRNA-1 annotation:"exosome complex component mtr3-like") HSP 1 Score: 190.66 bits (483), Expect = 9.345e-60 Identity = 112/276 (40.58%), Postives = 159/276 (57.61%), Query Frame = 0 Query: 1 MNKKQTDFRRFQSPSDAKDY---RIFLKNENKGEKDKYRLDGERLKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQKKLDFSSTTGILSVEYKETAFA------SRDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSVRLHKKRAFVDPCKKEEGIHASITDEENDGNIVIGYQPSLEQIVALLQDGIMXQTVLSSQIQNLIISAKETLPMIQECLIESLNEK 267 M + D RRF P A Y R+ D + S +R LF +L+K +GSAY+E+G TKV+ SVFGPREI ++ DFS G+LSV+Y+ F+ S S + + L L L++T+CLHLYPKS+IDV I+VLENDGS +A AIT A LAL++AS+++FDL IGSS+ + DP EE + S+ D E+ + IGYQPSLEQ+V +GI ++ +++L KE +P +Q+ L++SL K Sbjct: 18 MATAKHDPRRFTGPESATPYFDLRV----------DPPAKASKAQAASDIRPLFLTTDLLSKAQGSAYVEQGGTKVLCSVFGPREIPRRSDFS-MKGVLSVQYRSAPFSHPHQRLSGQHEAQSTDNELGLVLEGALQATICLHLYPKSQIDVIISVLENDGSTLAAAITCAGLALANASVHMFDLVIGSSLCRRGDKVVFDPDLDEE-LDESVPDGES-SFMTIGYQPSLEQMVVYQHEGISSPATIAQDMEHLAKKCKEIVPNVQKSLLDSLKAK 280
BLAST of EMLSAG00000003990 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold18_size714446-processed-gene-6.27 (protein:Tk08501 transcript:snap_masked-scaffold18_size714446-processed-gene-6.27-mRNA-1 annotation:"exosome complex component rrp46") HSP 1 Score: 69.707 bits (169), Expect = 1.659e-14 Identity = 45/160 (28.12%), Postives = 86/160 (53.75%), Query Frame = 0 Query: 42 LKDSSVRSLFCEVGVLTKCKGSAYIERGQTKVIASVFGPREIQ---KKLDFSSTTGILSVEYKETAFASRDTSDNSNEKNISLFLAETLRSTVCLHLYPKSKIDVFITVLENDGSAVATAITAASLALSDASINLFDLAIGSSV-RLHKKRAFVDPCKKE 197 + ++ +R ++ ++G+L GS + G++ V+ V+GP E++ +KL+ ++ + V+++ AS E+ + L + S+V L+P++ + V + L+ DG +A+A+ AA LAL DAS+ + L V R R VDPC+K+ Sbjct: 1 MSENQLRPVWAQLGLLGHTDGSVMLSMGRSAVMCGVYGPAEVKPHKEKLEGAT----VEVQWRPPTGAS-----GLAERALESVLRGLVSSSVLTSLHPRTCVHVSLQPLDRDGGELASAVNAACLALIDASVAMRCLFAAVQVARDPAGRLLVDPCRKQ 151 The following BLAST results are available for this feature:
BLAST of EMLSAG00000003990 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000003990 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 8
BLAST of EMLSAG00000003990 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 4
BLAST of EMLSAG00000003990 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 25
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BLAST of EMLSAG00000003990 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 21
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BLAST of EMLSAG00000003990 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000003990 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s213:385505..387237+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000003990-686756 ID=EMLSAG00000003990-686756|Name=EMLSAG00000003990|organism=Lepeophtheirus salmonis|type=gene|length=1733bp|location=Sequence derived from alignment at LSalAtl2s213:385505..387237+ (Lepeophtheirus salmonis)back to top Add to Basket
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