protein cip2a, snap_masked-scaffold262_size232883-processed-gene-1.8 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of protein cip2a vs. L. salmonis genes
Match: EMLSAG00000006167 (supercontig:LSalAtl2s:LSalAtl2s336:634073:637214:-1 gene:EMLSAG00000006167 transcript:EMLSAT00000006167 description:"maker-LSalAtl2s336-augustus-gene-6.41") HSP 1 Score: 150.599 bits (379), Expect = 7.189e-38 Identity = 196/780 (25.13%), Postives = 367/780 (47.05%), Query Frame = 0
Query: 1 MAWYLQQHHKEYKLSSIWTIIKLLTKWSSQSHPIRTYLAGSMAMAPYLTDLYLLLPATSHERGVKVLALLRHVTAHLVLRRCETFVLD-LVPKLVELIENPDMELRSHSLYILTSLCRGSRVISKYLLSQLSEEQQKGLVIQDDEDAKVKVLTRHLNFCLTRLNLSFNAFEL----FGSESHLATISDALCTAYSEEQVLLMERFAEFLQDILQVQSVNPCPNQIQRGGDQDSQYSILPMMQQILLVVEFSEGSNPYANEAVFKFLR--LLLRWEPSRQPPSDNSLGAIMDLVLKSVSLLLDTSGSNIRAQEAIHLLEETIQLFHSQGNPDSTERLNVRLQMEPIFTNLCPRMEANKPKTSDRTLEATLSLMCTISELGESWDDLVRNNLPL-TKFRN-----LVQSETNPMCLTKM----IRLAKILAHDDKDWTKFHMSCLSHDRMTKMLIKHLQSTLCSAMERSDILHVMSNGTIARVSEDGRTLDLEFATEDMVENGSSSPLFCSNPFLKESQILHLENTLNAVNKIAQAAGGGDAKKAIGSVVPEILDLGDYRLISQQRKIDSLVSSLRSADARILHQNEHISTLEAELTKTFSMLRLVLQKSHNLELDLEDVRLQFESLQEEAGDFRSKANQTIASKELEIKEMETERSKITTKAIKYKEQNETLQIAIKEHMQAEEELKQKLKNEAKSNSDLTAALEKREEKLKKKERQLEDEIGQRDHLAGELETLKKECASLQTLTKRQEQALAKKDKLLADQHDELHEVRRIQEQIFNLS 763
+ W L+ L I TI+ L K + R +L S L DL + + H +K L L++++ + L+ LV +++ I + D E+ + S++IL L + I L+ +E + L IQ D K++VL + L++ ++R A + ++++ + DA CTAY++E +L M F E L+ I + + + + + Y+ L ++++I + +F EGS +NE +F+FLR L++ W+ +++ +L++K +S L++ + L+E + L G ++ Q I + L + +NK +R A L ++ TIS+ +W + + + LP F N + + + C++ M I K L +D +W K L + +++ + DI SN + V E+ +D + L+ + E +I ++T++ + K + G+ I S E+ +LG++ + K++ L SL A+ I +N I +E+++ + L + + +N ++++ ++ + ESL+ + +++ + K E +E+E K+++KA+KYK+ E LQ I+EH + + EL++ LK+E K NSD+ LEK+EEKLKKK+R L E R + E+ETLKK+ S ++KRQ L KKDK +A++ +E++ ++ IQ QI LS
Sbjct: 53 LEWILETFSTSTSL--IKTILNFLEKICEHNEEFRIFLRDS----SNLMDLSMKFLSKYH--SLKALRLIQYLVLGWKVGGPHMPKLEKLVQYVMKYITDGDREMTAPSVFILVCLYQLDFTIDNILI----QEDVEYLFIQKQRDPKLQVLIKMLHYSISRSIFIDKALSENEGNYKQDNYVLIMIDAFCTAYADEDILTMRLFTEILKSITR---------ETKNKSNIEGLYT-LNLVRRINHIADFGEGSTLISNECMFEFLRRFLMMSWDYNKEA---------FNLIIKLISQRLESCLKS-------PLIETILCLQDVLGKDAEAVAISSESQTNGIVSKLLKLISSNKIDRMERL--AVLRVLRTISKPDFNWSEYIVSKLPSPINFINSQIELIFDKDRSIPCVSVMLVDLILFCKEL--NDVNWKKIVEDVLLKNEHVIQSLRNCLNDFXHPSITKDIFLSTSNELLNTVHEE--------KNDDYTSKPRNLDLYGPVTGIFEDKI---DSTVDFIRKSIENNKFGN----ISSSSVELFELGNFLKDTADHKLEILQHSLEVAEKTIDLENIRIVQVESQVKEFTHALSRMDELYNNKKVEINEIDSELESLESNSFSLKNEMRVALDKKIKEHEELEKNYEKLSSKALKYKDDVEALQETIQEHFKVQAELQENLKSEKKLNSDMVXTLEKQEEKLKKKDRALNVESNTRQLIEKEIETLKKDYKSQLGISKRQ---LDKKDKQIAEKREEINSMKEIQNQILKLS 772
BLAST of protein cip2a vs. L. salmonis genes
Match: EMLSAG00000000140 (supercontig:LSalAtl2s:LSalAtl2s1021:57445:61816:1 gene:EMLSAG00000000140 transcript:EMLSAT00000000140 description:"maker-LSalAtl2s1021-snap-gene-0.38") HSP 1 Score: 88.1965 bits (217), Expect = 2.857e-18 Identity = 164/723 (22.68%), Postives = 320/723 (44.26%), Query Frame = 0
Query: 1 MAWYLQQHHKEYKLSSIWTIIKLLTKWSSQSHPIRTYLAGSMAMAPYLTDLY-LLLPATSHERGVKVLALLRHVTAHLVLRRCETFVLD-LVPKLVELIENPD-MELRSHSLYILTSLCRGSRVISKYLLSQLSEEQQKGLVIQDDEDAKVKVLTRHLNFCL-----TRLNLSFNAFELFGSESHLATISDALCTAYSEEQVLLMERFAEFLQDILQVQSVNPCPNQIQRGGDQDSQ-YSILPMMQQILLVVEFSEGSNPYANEAVFKFLRLLLRWEPSRQPPSDNSLGAIMDLVLKSVSLLLDTS-GSNIRAQ--EAIHLLEETIQLFHSQGNPDSTERLNVRLQMEPIFTNLCPRMEANKPKTSDRTLEATLSLMCTISELGESWDDLVRNNL--PLTKFRN----LVQSETNPMCLTKMIRLAKIL---AHDDKDWTK-FHMSCLSHDRMTKMLIKHLQSTLCSAMERSDILHVMSNGTIARVSEDGRTLDLEFATEDMVENGSSSPLFCSNPFLKESQILHLENTLNAVNKIAQAAGGGDAKKAIGSVVPEILDLGDYRLISQQRKIDSLVSSLRSADARILHQNEHISTLEAELTKTFSMLRLVLQKSHNLELDLEDVRLQFESLQEEAGDFRSKANQTIASKELEIKEMETERSKITTKAIKYKEQNETLQIAIKEHMQAEEELKQKLKNEAKSNSDLTAALEKREEKLKKKERQLE 701
+ W LQ H L + I+ L +R +L S ++L+ L L S ++ L L+ H+ L + L+ LV L++ I + D E+R+ S++I+ LC + + ++LSQ ++ + L D K++ L + LN+ + T +LS + E+ ES++ + DA C+AY + +L+M E L+ I + +R + ++ L + + I+L+ +F + SN +NE + FLR LL+ SDN GA D+ +SLL SN+R+ E + +++ I L + + + N M+ I + + +NK DR + L + +IS++ + +++ + L P+ +F N L+ + N + + + IL +D W K L ++R+ LI L S LC +IL + N T+ + ++ + E ED + P L + L + L + ++ A ++ + G+++ S RK + + L +A+ I + +++ LE+++ + ++ L++ + ++ L R + +S+Q +++ + K E E+E K++ KA+KYKE + LQ I+EH Q +L +K K A+ + +L + E + + ++Q E
Sbjct: 55 LEWILQTHSSSTSL--VKAILSFLENICILHEELRIFLRDS-------SNLFGLCLKFLSEIHSLRALRLIEHLVLGWRLGDSDVARLERLVQYLMKFIVDCDNKEMRASSVFIIVCLCHWNTCAADFILSQ---KEIEYLFNSKQTDLKLQALIKMLNYFMSQSRITDESLSEDPNEMNKIESYIVILIDAFCSAYVCDDLLMMRLLTEILESITK-----------ERKTKRTTESLDTLSLAKGIILITDFGDESNQMSNEYILGFLRHLLK------ISSDNK-GA-FDI----ISLLASQRLKSNLRSPILETMLCIQDGISLLG--DDAEIIAKSNEGYMMDYIISQSLQTLLSNKINHMDRL--SVLETLRSISKVDFNLSEMIVSRLQCPI-QFINSQIELIFEKKNSLTCVAPVLVELILFCKEFNDIKWKKAIEDVFLKNERVVCSLITCLGS-LC----HPNILKCI-NETLIPLLKETSCVSREEKYEDCI------------PELTQ---LEMYRPLTSFENVSSA---------------DLFEFGNFQKYSADRKAEKIQQYLNAAEETIAKKKKYVVQLESKVKWLYHVMSLMVLRDDQIKFVLPRKRNELQSVQSNNLSLKNEMKSALHEKMRENGELEENYEKLSLKALKYKEDIDALQKTIQEHFQ--RQLDKKDKQLAEYSEELNSMKEIQNQIFNLSKKQAE 699
BLAST of protein cip2a vs. nr
Match: gi|1325318308|ref|XP_023340909.1| (myosin-9-like [Eurytemora affinis]) HSP 1 Score: 73.559 bits (179), Expect = 6.938e-10 Identity = 82/264 (31.06%), Postives = 129/264 (48.86%), Query Frame = 0
Query: 513 KIAQAAGGGDAKKAIGSVVPEI-LDLGDYRLISQQRKIDSLVSSLRSADARILHQNEHISTLEAELTKTFSMLRLVLQKSHNLELDLEDVRLQFESLQEEAGDFRSKANQTIASKELEIKEMETERSK--------ITTKAIKYKEQNET----LQIAIKEHMQAEEELKQKLKNEAKSNSDLTAALEKREEKLKKKERQLEDEIGQRDHLAGELETLKKECASLQTLTKRQEQALAKKDKLLADQHDELHEVRRIQEQIFNLS 763
++A + GD+ + I S ++ L LG +Q +I L SSL +++ + +S+L EL + ML LV ++ + QEE R++ + +I+E+ E S+ I A + E+ E L+ KE Q E QKL ++L AAL K +KL+K + LE+E +R+ + + E L+K SL TLT+ QE+AL KK+KLL D ELHE++ I++ IFNLS
Sbjct: 260 RLATSTRVGDSDERILSQALQLQLSLGQR----EQTQIKVLRSSLEASNESARNLTLVVSSLSQELEEVKLMLNLV--------------SARYSAGQEELASIRTQQLTYTKDTDFKIEELTRELSRTKQHMQKEIENSAARIAEEQENNKKMLEKMRKERDQLMTESDQKL-------AELKAALTKSHDKLRKTMKLLEEEQARREVVEKKNEKLEKREQSLDTLTRNQEEALNKKEKLLQDAQRELHELKTIRDAIFNLS 498
BLAST of protein cip2a vs. nr
Match: gi|1227979708|ref|XP_021921436.1| (uncharacterized protein LOC110830635 [Zootermopsis nevadensis] >gi|1227979710|ref|XP_021921437.1| uncharacterized protein LOC110830635 [Zootermopsis nevadensis] >gi|1227979712|ref|XP_021921438.1| uncharacterized protein LOC110830635 [Zootermopsis nevadensis] >gi|1227979714|ref|XP_021921439.1| uncharacterized protein LOC110830635 [Zootermopsis nevadensis] >gi|646714839|gb|KDR18672.1| Protein CIP2A [Zootermopsis nevadensis]) HSP 1 Score: 67.781 bits (164), Expect = 6.670e-8 Identity = 103/394 (26.14%), Postives = 177/394 (44.92%), Query Frame = 0
Query: 411 LAHDDKDWTKFHMSCLSHDRMTKMLIKHLQSTLCSAMERSDILH--VMSNGTIARVSE----------DGRTLDLEFATEDM------VENGSSSPLFCSNPFLKESQILHLENTLNAVNKIAQAAGGGDAKKAIGSVVPEILDLGDYRLISQQRKIDSLVSSLRSADARILHQNEHISTLEAELTKTFSMLRLVLQKSHNLELDLEDVRLQFESLQEEAGDF--RSKANQTIASKELE--IKEMETERSKI-----------TTKAIKYKEQNETLQIAIKEHMQAEEE------LKQKLKNEAKSNSDLTAALEKREEKLKKKERQLEDEIGQ-RDHLAGELETLKKECASLQTLTKRQEQALAKKDKLLADQHDELHEVRRIQEQIFNLSN 764
LA D W K + L H ++ +L + M DI +M GT+ +E D L L +T M VEN S P L Q L+N + K+ +A + + S V ++L +Y+L + +L +SL +A++ H N ++ + AE ++ +L HN + E LQEE F R +A Q +A +E + + EM+ ++ + TT A K +E + T Q + Q EE ++QK K++ NS+LT L K EE++ K++R +E EIGQ ++++ ++ L+ E + + L K QE+ + +K+ ++ +L E++RI+E IF +S
Sbjct: 462 LAPHDGQWLKLYSDVLQHKQVQMVL------AIALYMGEEDIKRRVLMLTGTVGFPAECVSLLAKSLSDLEPLVLASSTSGMGKADANVENVCGSRQHEMMPLLSLVQEGRLDNF---IAKLEEALERSEIRDISTSAV---MELYEYKLAAIGHSERALQASLEAANSHSTHLNHRLAQMSAEASRLRQLLY------HNQQC--------LEGLQEEKQAFVCRMEAAQVVAEQEHKKHVTEMKAKQRLLCELSAAIEELKTTVATKEEELSLTKQRLDAMNRQIEEVQSQLTLVEQKYKDQQSKNSELTRTLSKLEERIAKRDRIIE-EIGQKKENMQKTIQNLEMELTNYRMLCKAQEKNIMEKEAEISTTQQQLGELQRIREAIFAISG 828 The following BLAST results are available for this feature:
BLAST of protein cip2a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of protein cip2a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of protein cip2a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold262_size232883:203561..210967- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold262_size232883-processed-gene-1.8 ID=snap_masked-scaffold262_size232883-processed-gene-1.8|Name=protein cip2a|organism=Tigriopus kingsejongensis|type=gene|length=7407bp|location=Sequence derived from alignment at scaffold262_size232883:203561..210967- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'protein cip2a' has the following synonyms
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