e3 ubiquitin-protein ligase rnf8-b-like, snap_masked-scaffold899_size83673-processed-gene-0.9 (gene) Tigriopus kingsejongensis

Overview


Name	e3 ubiquitin-protein ligase rnf8-b-like
Unique Name	snap_masked-scaffold899_size83673-processed-gene-0.9
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. L. salmonis genes
Match: EMLSAG00000002262 (supercontig:LSalAtl2s:LSalAtl2s142:1422944:1424702:-1 gene:EMLSAG00000002262 transcript:EMLSAT00000002262 description:"maker-LSalAtl2s142-snap-gene-13.28")

HSP 1 Score: 96.2857 bits (238), Expect = 8.101e-23
Identity = 39/82 (47.56%), Postives = 56/82 (68.29%), Query Frame = 0

Query:   36 QELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKC-DASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDR 116
            +E  CTIC E+FI+P T  CGHVFC++CI +WK KC +  L CPNCR  V     + N Y+ENLI + ++ +G D++ ER++
Sbjct:  355 EEFKCTICEEIFIKPVTTNCGHVFCEYCITKWKHKCKENQLTCPNCRLSVT--SYSKNHYIENLIESLVRKFGDDIQKEREK 434

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. L. salmonis genes
Match: EMLSAG00000009314 (supercontig:LSalAtl2s:LSalAtl2s595:428650:432260:1 gene:EMLSAG00000009314 transcript:EMLSAT00000009314 description:"maker-LSalAtl2s595-augustus-gene-4.28")

HSP 1 Score: 60.077 bits (144), Expect = 1.207e-10
Identity = 30/110 (27.27%), Postives = 54/110 (49.09%), Query Frame = 0

Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRV-GRDKITPNIYVENLIHNFIQGYGP--------DLKAERDRRLAERQAQVEATDQ 130
            F++ F   L C+IC E+F+    + CGH FC+ CI +W  K +    CP CR  + G+     N+ ++  I   ++ + P        DL  ER  +   R + + ++++
Sbjct:  158 FKELFETNLQCSICSEIFLFATVITCGHTFCEDCIEEWTSKKN---NCPICRANIKGK---ASNVVLDEHIEKMVEQFFPETEKKSRKDLVLERKTKKMNRVSNINSSNK 261

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. L. salmonis genes
Match: EMLSAG00000007447 (supercontig:LSalAtl2s:LSalAtl2s426:331796:339618:1 gene:EMLSAG00000007447 transcript:EMLSAT00000007447 description:"maker-LSalAtl2s426-augustus-gene-3.11")

HSP 1 Score: 53.1434 bits (126), Expect = 3.855e-8
Identity = 25/78 (32.05%), Postives = 44/78 (56.41%), Query Frame = 0

Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRD-KITPNIYVENLIHNFIQGY 106
            F +Q  +ELSC  C ++ + P T PC H  C  CI++  +  +   +CP+CR+ +GR+  I  N  ++ ++ +   GY
Sbjct:  629 FYNQVEEELSCICCKDIVLDPVTTPCQHNMCKKCILRVFK--EELYSCPSCRKELGRNYSIKVNKSLQTILRSMFDGY 704

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|82209734|sp|Q7ZX20.1|RNF8A_XENLA (RecName: Full=E3 ubiquitin-protein ligase rnf8-A; AltName: Full=RING finger protein 8-A; AltName: Full=RING-type E3 ubiquitin transferase rnf8-A)

HSP 1 Score: 71.633 bits (174), Expect = 6.891e-13
Identity = 34/98 (34.69%), Postives = 51/98 (52.04%), Query Frame = 0

Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQVEA 127
              D    EL C IC E FI   TL C H FC +CI  WK++ +    CP CRQ +  +  T ++ ++N I + +    P++K  R   + ER+  V+A
Sbjct:  372 MNDVLDNELQCIICSEHFIEAVTLNCAHSFCSYCIKSWKKRKE---ECPICRQEIVTE--TRSLVLDNCIDSMVDKLSPEMKNRRAALILERKEMVQA 464

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|82202083|sp|Q6NRG0.1|RNF8B_XENLA (RecName: Full=E3 ubiquitin-protein ligase rnf8-B; AltName: Full=RING finger protein 8-B; AltName: Full=RING-type E3 ubiquitin transferase rnf8-B)

HSP 1 Score: 70.0922 bits (170), Expect = 2.692e-12
Identity = 33/98 (33.67%), Postives = 51/98 (52.04%), Query Frame = 0

Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQVEA 127
              D    EL C IC E FI   TL C H FC +CI  W+++ +    CP CRQ +  +  T ++ ++N I + +    P++K  R   + ER+  V+A
Sbjct:  367 MNDVLDNELQCIICSEHFIEAVTLNCAHSFCSYCIKSWRKRKE---ECPICRQEILSE--TRSLVLDNCIDSMVDKLSPEMKNRRAALILERKEMVQA 459

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|123782072|sp|Q4KLN8.1|RNF8_RAT (RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName: Full=RING finger protein 8; AltName: Full=RING-type E3 ubiquitin transferase RNF8)

HSP 1 Score: 67.781 bits (164), Expect = 1.154e-11
Identity = 35/96 (36.46%), Postives = 50/96 (52.08%), Query Frame = 0

Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQW-KRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQ 124
              D    EL C IC E FI   TL C H FC FCI +W KRK +    CP CR+ +  +  T ++ ++N I   ++    D+K  R   + ER+A+
Sbjct:  395 MNDVLENELQCIICSEYFIEAVTLNCAHSFCSFCISEWMKRKVE----CPICRKDI--ESRTNSLVLDNCISKMVERLSSDVKERRSVLIRERRAK 484

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|21362895|sp|Q8VC56.1|RNF8_MOUSE (RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName: Full=ActA-interacting protein 37; Short=AIP37; AltName: Full=LaXp180; AltName: Full=RING finger protein 8; AltName: Full=RING-type E3 ubiquitin transferase RNF8)

HSP 1 Score: 67.3958 bits (163), Expect = 1.597e-11
Identity = 32/95 (33.68%), Postives = 48/95 (50.53%), Query Frame = 0

Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQ 124
              D    EL C IC E FI   TL C H FC FCI +W ++    + CP CR+ +  +  T ++ ++N I   +     D+K  R   + ER+A+
Sbjct:  396 MNDLLENELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKR---KVECPICRKDI--ESRTNSLVLDNCISKMVDNLSSDVKERRSVLIRERRAK 485

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|21362894|sp|O76064.1|RNF8_HUMAN (RecName: Full=E3 ubiquitin-protein ligase RNF8; Short=hRNF8; AltName: Full=RING finger protein 8; AltName: Full=RING-type E3 ubiquitin transferase RNF8)

HSP 1 Score: 65.4698 bits (158), Expect = 7.995e-11
Identity = 30/95 (31.58%), Postives = 48/95 (50.53%), Query Frame = 0

Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQ 124
              D    EL C IC E FI   TL C H FC +CI +W ++    + CP CR+ +     T ++ ++N I+  +     ++K  R   + ER+A+
Sbjct:  393 MNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKR---KIECPICRKDIKSK--TYSLVLDNCINKMVNNLSSEVKERRIVLIRERKAK 482

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|82210116|sp|Q803C1.1|RNF8_DANRE (RecName: Full=E3 ubiquitin-protein ligase rnf8; AltName: Full=RING finger protein 8; AltName: Full=RING-type E3 ubiquitin transferase rnf8)

HSP 1 Score: 65.0846 bits (157), Expect = 1.094e-10
Identity = 33/110 (30.00%), Postives = 52/110 (47.27%), Query Frame = 0

Query:   10 ELSSPAREPSSPARAGPSDAFRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLA 119
            E++   +E +   +        +    EL C+IC ELFI   TL C H FC  CI +W+ + D    CP C Q +     T ++ ++N I   ++    D+   R+RRL 
Sbjct:  362 EVTKEEKEKAKAQKEEVVTQMTEVLESELQCSICSELFIEAVTLNCAHSFCQHCISEWRNRKD---KCPMCWQNITSQ--TRSLVLDNCIDRMVENLSADM---RERRLV 463

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|75061601|sp|Q5R4I2.1|RNF8_PONAB (RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName: Full=RING finger protein 8; AltName: Full=RING-type E3 ubiquitin transferase RNF8)

HSP 1 Score: 64.3142 bits (155), Expect = 2.010e-10
Identity = 29/95 (30.53%), Postives = 47/95 (49.47%), Query Frame = 0

Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQ 124
              D    EL C IC E FI   TL C H FC +CI +W ++    + CP CR+ +     T ++ ++N I+  +     ++K  R   + ER+ +
Sbjct:  394 MNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKR---KIECPICRKDIKSK--TYSLVLDNCINKMVNNLSSEVKERRIVLIRERKVK 483

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|119366657|sp|Q2HJ46.1|RNF8_BOVIN (RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName: Full=RING finger protein 8; AltName: Full=RING-type E3 ubiquitin transferase RNF8)

HSP 1 Score: 62.3882 bits (150), Expect = 8.918e-10
Identity = 31/96 (32.29%), Postives = 47/96 (48.96%), Query Frame = 0

Query:   30 FRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQW-KRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQ 124
              D    EL C IC E F+   TL C H FC +CI +W KRK +    CP CR+ +     T ++ ++N I   +     ++K  R   + ER+ +
Sbjct:  395 MNDVLENELQCIICSEYFVEAVTLNCAHSFCSYCINEWMKRKVE----CPICRKDIKSK--TRSLVLDNCISKMVDNLNSEVKERRIVLIRERKGK 484

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|353558884|sp|A4IF63.1|TRIM2_BOVIN (RecName: Full=Tripartite motif-containing protein 2; AltName: Full=E3 ubiquitin-protein ligase TRIM2; AltName: Full=RING-type E3 ubiquitin transferase TRIM2)

HSP 1 Score: 58.151 bits (139), Expect = 2.826e-8
Identity = 30/86 (34.88%), Postives = 42/86 (48.84%), Query Frame = 0

Query:   19 SSPARAGPSDAFRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRV-----GRDKITPNIYVENLI 99
            +S A   PS   R    Q L C+IC E +  PK LPC H FC+ C+  +      +L+CP CRQ       G   +  N ++ NL+
Sbjct:    2 ASEATNIPSPVVRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNFFITNLM 87

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Match: gi|52783145|sp|Q92021.1|NF7B_XENLA (RecName: Full=Nuclear factor 7, brain; Short=xNF7; Short=xNF7-B)

HSP 1 Score: 57.7658 bits (138), Expect = 3.081e-8
Identity = 35/99 (35.35%), Postives = 52/99 (52.53%), Query Frame = 0

Query:    9 RELSSPAREPSSPARAGPSDAFRD--------QFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQ-WKRKCDASLACPNCRQRVGRDKITPNIYVENL 98
            R++  P  EP   A+    DA ++         F++EL+C +C ELF  P  + CGH FC  CI + W+ +  +S ACP CR+ +   K T N  + NL
Sbjct:  107 RKIEEPEPEPKK-AKVEEKDASKNASSLGAAGDFAEELTCPLCVELFKDPVMVACGHNFCRSCIDKAWEGQ--SSFACPECRESITDRKYTINRVLANL 202

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Match: gi|291242845|ref|XP_002741316.1| (PREDICTED: E3 ubiquitin-protein ligase RNF8-B-like [Saccoglossus kowalevskii])

HSP 1 Score: 93.2041 bits (230), Expect = 1.097e-17
Identity = 70/233 (30.04%), Postives = 115/233 (49.36%), Query Frame = 0

Query:   32 DQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQW---KRKCDASLACPNCRQRV-GRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQVEATDQLLAEKESLRQANRGRPGAPSGGLSTIHAMFQRVQHNLNRTEGGQSGGVSTRSNTRVIQVDSDSSESN------------DEATSHPEDEHEDEADTDSSMEGEEGAPYGGYGRCYSCDAV----PGRPSR 244
            D    EL C++C+ELF+   TL C H FC++CI +W   K+ CD    CP CR +V  R+K   +I +++ I   ++    +LK  R   +AER+   +  D+   ++   +Q++  R G  +  +S                   ++ G +TRS T ++ +DSDS + +            D ++ +  DE  + +D+ S +EG+  A YGGYGRCY C +     PG P R
Sbjct:  402 DVMEDELQCSLCYELFVEATTLSCSHSFCNWCITEWLVTKKHCD----CPVCRAKVTSRNK---SIVLDSYIDKMVENLSDELKTRRLELIAERKKNTQ--DRGAHKRSPKKQSDSHRTGDETTTIS------------------ARTSGPATRSRTHMVVIDSDSDDDDDDDDDDNNNSPIDISSDNNSDEFGENSDS-SDVEGDSDAIYGGYGRCYVCGSTGHWAPGCPFR 606

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Match: gi|1285011495|ref|XP_023017780.1| (E3 ubiquitin-protein ligase rnf8-B-like [Leptinotarsa decemlineata])

HSP 1 Score: 88.5817 bits (218), Expect = 3.409e-17
Identity = 51/149 (34.23%), Postives = 78/149 (52.35%), Query Frame = 0

Query:    8 ARELSSPAREPSSPARAGPSDAFRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQVEATDQLLAEKESLRQANRGRPGAPSGGLSTI 156
            ++E +   +   + ++ GP    R++F  E+ C+IC E+F++  TL C H FC FCI  W++K D    CP CR ++    I+P + ++N+I   IQ    ++K  R   L ER+  VE   +   EKE     NRGRP      LS I
Sbjct:   45 SQECTKNEKSNDAKSKGGPETDSREKFHDEMQCSICSEMFVKAVTLNCSHTFCKFCIEAWRKKKD---ICPICRSKIT--SISPTLVLDNIIEMEIQNSSEEVKQHRKELLEERKKCVEPQSK-HKEKEI---PNRGRP----NNLSVI 180

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Match: gi|1279710228|ref|XP_022921211.1| (E3 ubiquitin-protein ligase CHFR-like [Onthophagus taurus])

HSP 1 Score: 90.8929 bits (224), Expect = 3.605e-17
Identity = 69/239 (28.87%), Postives = 108/239 (45.19%), Query Frame = 0

Query:   32 DQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQ----AQVEATDQLLAEKESLRQ-ANRGRPGAPSGGLSTIHAMFQRVQHNLNRTEGGQSGGVST-----------------RSNTRVIQVDSDSSESNDEATSHPEDEHEDEAD--------TDSSMEGEEGAP---YGGYGRCYSCDA 237
            ++   EL C+IC ELF++ +TL C H FC+ CI  WKRK   +  CP CR ++    ITP I ++NL++  I+    ++K  R   L ER+     +++   +    + S+R  A+RG  G+ +            V  NL  +  G +   S                    +T    +D+D SE+ D   S+ +D   D+A+        +D   E   G P   YGGYG C+ C A
Sbjct:  168 EKVETELQCSICTELFVKAQTLNCSHTFCNSCIQAWKRK---NYICPICRAKI--KTITPTIVLDNLVNTVIEASSEEIKKNRQLLLQEREKLPIKRLKNDSKFKRTRRSVRSLASRGTSGSTNSA---------GVTRNLRASTRGSTAAESAPPEAIWISSSDSDSESDEYSTFDFDLDTD-SETMDTLLSNLDDIMNDDANGSMFSAFYSDGHSEYVPGNPEVYYGGYGSCFRCGA 391

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Match: gi|1236542998|gb|PAA66110.1| (hypothetical protein BOX15_Mlig014125g1, partial [Macrostomum lignano])

HSP 1 Score: 85.5001 bits (210), Expect = 4.627e-15
Identity = 68/232 (29.31%), Postives = 107/232 (46.12%), Query Frame = 0

Query:    6 SPARELSSPAREPSSPARAGPSDAFRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQVEATDQLLAEKESLRQANRGRPGAPSGGLSTIHAMFQRVQHNLNRTEGGQSGGVSTRSNTRVIQVDSDSSESNDEATSHPEDEHEDEADTDS--SMEGEEGAPYGGYGRCYSC 235
            S AR+ ++ +   +  ARA    +  +    EL+C IC +L +   T+PC H FC +CI +W R+ +    CP CR   G   ++  + V++ +   +    P+ +AERD R+AE   Q E  D+L   K       R RPG  S          ++ Q      +  Q    +  S  R     +     + ++ S  + E+   + TDS  SM+G   A YGGYGRCY+C
Sbjct:  325 SKARDAAASSGGVTPEARADIMRSLAEVLETELNCPICCDLLVDAATMPCSHTFCRYCIEEWLRRKN---ECPQCRA-PGNGSLSRALVVDSYVDRMVAELAPERRAERDARVAE---QREKLDKLQGRK-------RPRPGQQSQTQQQQQQQQRQQQAASTSRQQRQPPAAAGPSGRRGAAAATAIVLDSSDSDSDSDAEYNGGSSTDSSESMDGNPRAYYGGYGRCYNC 542

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Match: gi|1236563010|gb|PAA84889.1| (hypothetical protein BOX15_Mlig014125g3, partial [Macrostomum lignano])

HSP 1 Score: 85.1149 bits (209), Expect = 6.149e-15
Identity = 68/232 (29.31%), Postives = 107/232 (46.12%), Query Frame = 0

Query:    6 SPARELSSPAREPSSPARAGPSDAFRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQVEATDQLLAEKESLRQANRGRPGAPSGGLSTIHAMFQRVQHNLNRTEGGQSGGVSTRSNTRVIQVDSDSSESNDEATSHPEDEHEDEADTDS--SMEGEEGAPYGGYGRCYSC 235
            S AR+ ++ +   +  ARA    +  +    EL+C IC +L +   T+PC H FC +CI +W R+ +    CP CR   G   ++  + V++ +   +    P+ +AERD R+AE   Q E  D+L   K       R RPG  S          ++ Q      +  Q    +  S  R     +     + ++ S  + E+   + TDS  SM+G   A YGGYGRCY+C
Sbjct:  327 SKARDAAASSGGVTPEARADIMRSLAEVLETELNCPICCDLLVDAATMPCSHTFCRYCIEEWLRRKN---ECPQCRA-PGNGSLSRALVVDSYVDRMVAELAPERRAERDARVAE---QREKLDKLQGRK-------RPRPGQQSQTQQQQQQQQRQQQAASTSRQQRQPPAAAGPSGRRGAAAATAIVLDSSDSDSDSDAEYNGGSSTDSSESMDGNPRAYYGGYGRCYNC 544

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Match: gi|1080052667|ref|XP_018567892.1| (E3 ubiquitin-protein ligase CHFR-like isoform X1 [Anoplophora glabripennis])

HSP 1 Score: 82.0333 bits (201), Expect = 8.112e-14
Identity = 68/231 (29.44%), Postives = 95/231 (41.13%), Query Frame = 0

Query:   22 ARAGPSDAFRDQ----------FSQELSCTICHELFIRPKTLPCGHVFCDFCIMQW-KRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQVEATDQLLAEKESLRQANRGRPGAPSGGLSTIHAMFQRVQHNLNRTEGGQSGGVSTRS-NTRVIQVDSDSSESNDEATSHPED-----EHEDEADTDSSMEGEEGAPYGGYGRCYSC 235
            A+ GPS    D+             EL C IC ELF++  TL C H FC +CI  W K K D    CP CR ++    +T  I ++N+I   I+    ++K  R   L ER+ Q EA  Q        +       G   G          R Q +  R        ++  +    VI++ SDS  S D  +  P D     +H+D  DT S         +GGYG C+ C
Sbjct:  304 AQPGPSTIKTDKPPEQTDNYEVMENELQCVICSELFVKALTLNCSHTFCKYCIRMWNKNKSD----CPICRTKIT--SMTSTIVLDNVIEKVIETSNEEIKQHRRSVLEERRKQEEAESQ-PPAGAQQQGRRGRGRGRGGGTRRARGGRGNRTQDDQPRINVLDPVAINIGALVNNVIELSSDSDWSTDTESMSPNDMQDEYDHDDWYDTRSVY-------WGGYGYCFRC 520

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Match: gi|1242782082|ref|XP_022330902.1| (E3 ubiquitin-protein ligase RNF8-like [Crassostrea virginica])

HSP 1 Score: 81.2629 bits (199), Expect = 1.572e-13
Identity = 61/223 (27.35%), Postives = 96/223 (43.05%), Query Frame = 0

Query:   22 ARAGPSDAFRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQVEATDQLLAEKESLRQANRGRPGAPSGGLSTIHAMFQRVQHNLNRTEGGQSGGVSTRSNTR-------VIQVDSDSSESNDEATSHPEDEHEDEADTDSS--MEGEEGAPYGGYGRCYSC 235
            AR      F D    EL C+IC+EL+I+  +L C H FC  CI +W +       CP CR  V       +I ++N I   ++    +LK  R + +A R+ + E  +++  E E   Q    R G             Q+        EG Q   + +   T        +++ + ++ E +D  +S   D+H    D+D S  + G+    YGGYG CY C
Sbjct:  373 ARQDILSNFSDLMETELQCSICNELYIQATSLSCSHSFCALCIAEWMK---VKRECPICRTPVTSQ--MRSIALDNYIDTMVEHLSEELKIRRKQLVAARKEEQEKIEKVKQEAERANQRTNNRRGRGGRRRGRGGRRQQQAPTTTTNREGHQPIIIESEDETDGGNIMVGLVEEEVEAEELSDRGSSTNSDDHFYSGDSDDSDVISGDSDVYYGGYGHCYRC 590

[Close]

BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Match: gi|1229720736|ref|XP_022122841.1| (E3 ubiquitin-protein ligase rnf8-like isoform X2 [Pieris rapae])

HSP 1 Score: 78.9518 bits (193), Expect = 9.405e-13
Identity = 69/242 (28.51%), Postives = 110/242 (45.45%), Query Frame = 0

Query:   23 RAGPS-------DAFRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKR-KCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQVEATDQLLAEKESLRQANRGRPGAPSGGLSTIHAMFQRVQHNLNRTEGGQSGGVSTRSNTRVIQVDSDSSESNDEATSHPEDEHEDEADTDSS--------MEGEEGAPYGGYGRCYSCDA----VPGRPSR 244
            RAGPS       +        EL C+IC E+FI P  L CGH FC +CI  WK+ K D    CP CR  +  +  + +I V++ I   +     ++K +R+  L  R+ +     + L    +  Q NR R  A S       + +   +     +EG  +       ++ + Q  S +S+S+     + + E++D+  + S+        + G  G+ YGGYGRCY C A     PG P+R
Sbjct:  372 RAGPSYESSKPLEQIGQMMETELQCSICAEIFICPVMLGCGHTFCQYCINLWKKNKKD----CPICRTTIKYE--SRSIVVDSFIEKILPNLSEEMKKKREESLKIREEE-----ETLPSSGASAQNNR-RATAESES----ESQWDDSEGQFTGSEGDATEVFEDDWSSILDQYYSSASDSDGGFDFNSDSENDDDVTSRSNSCRRRPQRVPGNPGSYYGGYGRCYRCGAKGHWAPGCPNR 597

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Match: gi|642926073|ref|XP_008194754.1| (PREDICTED: E3 ubiquitin-protein ligase RNF8-B [Tribolium castaneum] >gi|270008553|gb|EFA05001.1| E3 ubiquitin-protein ligase CHFR-like Protein [Tribolium castaneum])

HSP 1 Score: 77.0258 bits (188), Expect = 1.536e-12
Identity = 40/118 (33.90%), Postives = 59/118 (50.00%), Query Frame = 0

Query:    9 RELSSPAREPSSPARAGPS-DAFRDQFSQELSCTICHELFIRPKTLPCGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQV 125
            +EL  P     +P  A P  +   +    EL+C+IC ELFI+  TL C H FC FCI +W +       CP CR+ +    I P + ++N I  FI+    D+K  R   + +R+  V
Sbjct:  133 QELEEPFAAEGAPPEAKPQPEPNSEDLDTELTCSICSELFIKAVTLNCSHTFCKFCIDRWMKN---KSNCPICRKSIT--NIAPTLVLDNFIEKFIKTQSDDVKETRKNLIQQREEMV 245

[Close]

BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Match: gi|1041537691|ref|XP_017298883.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1A-like [Diaphorina citri])

HSP 1 Score: 78.1814 bits (191), Expect = 1.870e-12
Identity = 35/96 (36.46%), Postives = 54/96 (56.25%), Query Frame = 0

Query:   30 FRDQFSQELSCTICHELFIRPKTLP-CGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDRRLAERQAQ 124
            F +    E  CTIC E+F+   TL  C H FC+FCI +WK++      CP CR ++ R++   N  ++N I +FI    P +K+ R+  + E +AQ
Sbjct:  457 FAEVLESEAQCTICSEIFVNAITLLGCFHTFCEFCITEWKKQ---KQECPICRHKIVRNQEKRNFLIDNWIKSFIDKMSPAMKSAREEVVLESEAQ 549

HSP 2 Score: 73.9442 bits (180), Expect = 3.875e-11
Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 0

Query:   37 ELSCTICHELFIRPKTLP-CGHVFCDFCIMQWKRKCDASLACPNCRQRVGRDKITPNIYVENLIHNFIQGYGPDLKAERDR--RLAERQAQ 124
            E  CTIC E+F+   TL  C H FC+FCI +WK++      CP CR ++ R++   N  ++N I +FI    P +K+ R+   R+  +QAQ
Sbjct:  547 EAQCTICSEIFVNAITLLGCFHTFCEFCITEWKKQ---KQECPICRHKIVRNQEKRNFLIDNWIKSFIDKMSPAMKSAREEVVRIRAQQAQ 634

The following BLAST results are available for this feature:

BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. L. salmonis genes
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr

BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 3


Match Name	E-value	Identity	Description
EMLSAG00000002262	8.101e-23	47.56	supercontig:LSalAtl2s:LSalAtl2s142:1422944:1424702...	[more]
EMLSAG00000009314	1.207e-10	27.27	supercontig:LSalAtl2s:LSalAtl2s595:428650:432260:1...	[more]
EMLSAG00000007447	3.855e-8	32.05	supercontig:LSalAtl2s:LSalAtl2s426:331796:339618:1...	[more]

BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|82209734\|sp\|Q7ZX20.1\|RNF8A_XENLA	6.891e-13	34.69	RecName: Full=E3 ubiquitin-protein ligase rnf8-A; ...	[more]
gi\|82202083\|sp\|Q6NRG0.1\|RNF8B_XENLA	2.692e-12	33.67	RecName: Full=E3 ubiquitin-protein ligase rnf8-B; ...	[more]
gi\|123782072\|sp\|Q4KLN8.1\|RNF8_RAT	1.154e-11	36.46	RecName: Full=E3 ubiquitin-protein ligase RNF8; Al...	[more]
gi\|21362895\|sp\|Q8VC56.1\|RNF8_MOUSE	1.597e-11	33.68	RecName: Full=E3 ubiquitin-protein ligase RNF8; Al...	[more]
gi\|21362894\|sp\|O76064.1\|RNF8_HUMAN	7.995e-11	31.58	RecName: Full=E3 ubiquitin-protein ligase RNF8; Sh...	[more]
gi\|82210116\|sp\|Q803C1.1\|RNF8_DANRE	1.094e-10	30.00	RecName: Full=E3 ubiquitin-protein ligase rnf8; Al...	[more]
gi\|75061601\|sp\|Q5R4I2.1\|RNF8_PONAB	2.010e-10	30.53	RecName: Full=E3 ubiquitin-protein ligase RNF8; Al...	[more]
gi\|119366657\|sp\|Q2HJ46.1\|RNF8_BOVIN	8.918e-10	32.29	RecName: Full=E3 ubiquitin-protein ligase RNF8; Al...	[more]
gi\|353558884\|sp\|A4IF63.1\|TRIM2_BOVIN	2.826e-8	34.88	RecName: Full=Tripartite motif-containing protein ...	[more]
gi\|52783145\|sp\|Q92021.1\|NF7B_XENLA	3.081e-8	35.35	RecName: Full=Nuclear factor 7, brain; Short=xNF7;...	[more]

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BLAST of e3 ubiquitin-protein ligase rnf8-b-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|291242845\|ref\|XP_002741316.1\|	1.097e-17	30.04	PREDICTED: E3 ubiquitin-protein ligase RNF8-B-like...	[more]
gi\|1285011495\|ref\|XP_023017780.1\|	3.409e-17	34.23	E3 ubiquitin-protein ligase rnf8-B-like [Leptinota...	[more]
gi\|1279710228\|ref\|XP_022921211.1\|	3.605e-17	28.87	E3 ubiquitin-protein ligase CHFR-like [Onthophagus...	[more]
gi\|1236542998\|gb\|PAA66110.1\|	4.627e-15	29.31	hypothetical protein BOX15_Mlig014125g1, partial [...	[more]
gi\|1236563010\|gb\|PAA84889.1\|	6.149e-15	29.31	hypothetical protein BOX15_Mlig014125g3, partial [...	[more]
gi\|1080052667\|ref\|XP_018567892.1\|	8.112e-14	29.44	E3 ubiquitin-protein ligase CHFR-like isoform X1 [...	[more]
gi\|1242782082\|ref\|XP_022330902.1\|	1.572e-13	27.35	E3 ubiquitin-protein ligase RNF8-like [Crassostrea...	[more]
gi\|1229720736\|ref\|XP_022122841.1\|	9.405e-13	28.51	E3 ubiquitin-protein ligase rnf8-like isoform X2 [...	[more]
gi\|642926073\|ref\|XP_008194754.1\|	1.536e-12	33.90	PREDICTED: E3 ubiquitin-protein ligase RNF8-B [Tri...	[more]
gi\|1041537691\|ref\|XP_017298883.1\|	1.870e-12	36.46	PREDICTED: E3 ubiquitin-protein ligase BRE1A-like ...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold899_size83673	supercontig	scaffold899_size83673:79021..82054 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1	snap_masked-scaffold899_size83673-processed-gene-0.9-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold899_size83673:79021..82054+

gene from alignment at scaffold899_size83673:79021..82054+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold899_size83673-processed-gene-0.9 ID=snap_masked-scaffold899_size83673-processed-gene-0.9|Name=e3 ubiquitin-protein ligase rnf8-b-like|organism=Tigriopus kingsejongensis|type=gene|length=3034bp|location=Sequence derived from alignment at scaffold899_size83673:79021..82054+ (Tigriopus kingsejongensis)
GCCCGTGAGCCCTGTTCGCCGGCCCGTGAGCTCAGTTCGCCGGCCCGTGA
GCCCAGTTCGCCGGCCCGTGCGGGTCCGTCGGACGCCTTTCGGGACCAGT
TTAGCCAAGAGCTGAGCTGCACCATTTGCCACGAGTTATTCATCCGGGTA
AGCGCGAGTCCAGCCAGGCTAAAGCTAGCCTTGCGGGGAGCTGAGGAGGT
TACTCCGGGTTTGGGTCTGAATTGGGGTCCTTCAAGCCTCGAGGAACCAG
TCGACGTCCGGAGCCCCGCCTAATAGGCGCCGAAATCAGGCCCAGTCACC
ACTGGTTTTTCCCGGCGTCAACGCGCAATGAGGCTGACAACAGCCAAGCT
GTATGTGTAATAGTTTACTCCTACATATAGTATACATATCGCTCTAACGA
CTTCGAGATTTCACTCCAGGTCGATTATCGATATTTGACTTCGCATCGAA
TATCGAGTGTCTTTGACTTCACATCGACTATCGAGTTCCATGAGCGATAT
GATATTCCCTCGAAAAAATTGCGCACATTGCTTTTCTGTCCGGGTACGAG
ACTTGGCTGCTCTCTTGTCACAACTGACCCCGGAAATCTCAGCCATTACT
CATCACATACCTCAAGCATAGTCTATTCTAGTGAGCCAACGAGATCTGGT
TTAGCCGAAACTTCGGTTCGAATCCGAATAGAACAACAGCATTATTTTCC
CCCAAAGTAATGAGCATACAGCTTCGAAGAAGATTTTAATCATTCAAGGT
GTTTGGCCATTATTTCCGACATTACTATGTAGGTTACTGAACTGTTGGAT
TTGTCACTATTCCAAACAGTAATGGAGGCCTTGAACTCCACCACCTAGGC
TCTCGTTGTGCGGCGTGAATTTAATACCGGAACAAATTAATAACACTATC
TCTCACTCCTTGAGTCCGTTTTGCGCACTTAATTGGATTAAATGAGCCGG
GAAAATGCAACATTTCAATCCCTGGGGAAAAAAACTTCAATCCTGGGAAT
GGGCATGGCGAAAAAAAATAGCATTTTCCCGAAAAATCAGAATGACAATT
CCAATCTGAGCAACTCTAATTGGCTACTTTTCTCTATCTCATTATGTGTC
AAATACGATCGATGCATCGGATATCGAACTAACCTAACCTCAGTAATCTA
AATTGGAAGTCCTGTTTCGGTGATCGAATCCGATAATTGAATATGACACA
TCCCTAGTCTTGGTCCTGGCGTGCCCAATCACCATCCAATGGGATCCGCC
GACCCCGTGCTCTTTAGTCATCGATGGTTTTTTTGTTTTGTTTCGTTTGG
AAGGCCCCGGGCATTTCTGCACAGCTAGGAAAATCTCTACGGAGACATGG
TCAGCCTGGCGGTCAAATTTATCATGAATTATTACCTTACCCTCGAGGAA
TGACCACAGGTACGCCCACTTTAATCCCGCAAGGGCAGCCAGCAATAGCT
GTGAGTGAACACCACTAGTGGCCGGAACTTGGCAAGCCCGGGGATCGAAC
CCACGACCCTCGGATAGCGCAATGATAGATGACTGATTGTGCCACTCTAC
CATTGCGCTACGCTGCTTGCCTTCGGGTATGCCCAGATCACTTTTCGCGG
TCGGCTAGGTCCAGTCTGCCAGCGAAACCCGTGGTCTCTCCCCTCAGTCC
CTACCCGTGGTCTCTTCCCTCAGTCCCTGCCCGTGACAGCGGCTCGGTGT
CCGACTCGAGGAGCTCGCTCAGTGTGTTGAAAGCTCACGTTGCCTTTCAG
CCCAAAACCCTACCGTGTGGTCACGTCTTTTGCGATTTTTGCATCATGCA
ATGGAAGCGGAAATGCGATGCTTCGCTGGCCTGCCCCAATTGCCGACAAC
GCGTGGGACGGGACAAAATCACGCCCAATATTTATGTGGAGAACCTCATC
CACAACTTCATCCAAGGCTACGGACCCGATCTGAAGGCGGAGCGCGACCG
CCGATTGGCCGAGCGGCAGGCTCAAGTGGAAGCCACGGACCAGTTGCTAG
CCGAGAAAGAGTCACTCCGACAGGCTAATCGGGGCCGACCCGGAGCGCCC
AGTGGTGGACTGAGTACCATTCACGCCATGTTTCAGCGGGTCCAACATAA
CCTCAATCGGACGGAAGGAGGCCAATCCGGGGGCGTGAGTACGCGATCCA
ACACCAGGTACGCCATGACCGCTTCAAAAAATTGACCGGTCAATGTTATC
AATATAAACACAAATATTGTGTTTGCCATTTGACAAAATTATCTGGTCAG
ACACTCGTTCTTGAATCTGTGAGTCAGGTCGATTCGGACTTCCAAAACGA
TTTGAAAATGTTACAATGATGCGCTAAAATGGGAACACTAACCACTGGAT
GCCTAGTGAATGTTATGCTTATTTCCCGACTAGGGTCATTCAGGTCGATT
CCGACTCTTCCGAGAGCAATGACGAGGCAACATCTCATCCAGAAGACGAG
CATGAAGACGAAGCTGATACCGATTCGTCCATGGAGGGCGAGGAAGGTGC
CCCGTATGGCGGTTACGGAAGATGCTACAGTTGTGGTACGTGTAAACTTA
ACATGAGCCCGTCTGTAACCCTACTTTTTCATTTTTCACCACCGCCATCA
GTAGAAATGGCGAGCATGCTGCAGATATGCGTGTGTAATGTAGTAAAAAG
TGTGGTCATAAAGTGATGTAATAAAATGCCGTCCTTCACAGGGTAGCTAG
CCTGTTTCCGGTCAAGGAAATATCACTTCTTTGGTCAGAACAGCCGAGCA
AATTAAAATATTTTTTTGAAAGGAAAATTGGATTATTTCAAGTGGCCAAG
NGCTTCCTGAATCGAGATTTCCCCGTGGTTGATCTTGGCCACCTCGGAGC
TGGATAAACTCATTTCCAGGTCCTCTAGGAGACAGACGCCGTCCCCGGAC
GGCCCTCCCGTGATTTGGTTGAAGGCCACCTCGCCCGCCCGCACGTAGTC
GACAAAGATGGCGGTGAGGGCGGCGGCCTCGGAAAATCCCAGCCTCTCGC
CATAGAGGACGAGACGGCGGAAGAAAAGCGCTGA

Synonyms

The feature 'e3 ubiquitin-protein ligase rnf8-b-like' has the following synonyms


Synonym
Tk06724

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