short-chain dehydrogenase, snap_masked-scaffold9021_size2533-processed-gene-0.0 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of short-chain dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000010112 (supercontig:LSalAtl2s:LSalAtl2s668:190059:194758:1 gene:EMLSAG00000010112 transcript:EMLSAT00000010112 description:"augustus_masked-LSalAtl2s668-processed-gene-1.1") HSP 1 Score: 82.4185 bits (202), Expect = 1.119e-18 Identity = 57/197 (28.93%), Postives = 95/197 (48.22%), Query Frame = 0
Query: 6 GEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEA--VANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISP 200
G+V L+TGA GIGR A++ A GA + + TG D Q E GG + + S+ D + ++++ + FG L ++NNAG+L + N + + +D VM ++++ F T A + + IVN +S +G+ + G Y +KS + FT+ A ELA VR N+++P
Sbjct: 6 GKVALITGASSGIGRSTAILFAKLGATLSI---------TGRDIENLQKTAKECEGQGGTSAPLLIQASLDIEEDVKRVVEETINRFGRLDILVNNAGILERGSIENTSLESYDRVMNINVRSVFQTTSLATPHL-------IKTKGNIVNVSSVNGIRSFPGVLAYNMSKSALDQFTKCIALELAPKNVRVNSVNP 186
BLAST of short-chain dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000010213 (supercontig:LSalAtl2s:LSalAtl2s679:139734:140720:-1 gene:EMLSAG00000010213 transcript:EMLSAT00000010213 description:"augustus_masked-LSalAtl2s679-processed-gene-1.4") HSP 1 Score: 66.2402 bits (160), Expect = 2.303e-13 Identity = 56/192 (29.17%), Postives = 90/192 (46.88%), Query Frame = 0
Query: 7 EVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANT-GSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANA 197
++VL+TGA GIG AL A+ G+++ + + V + A G + V T +SS A + + +G L V+NNAGV+ + L +T + +D M +++ T+ A Y + K QP IVN +S +GL A G Y +K+G+ T+ A EL G+R N+
Sbjct: 7 KIVLITGASGGIGEGTALHFASLGSKLSL---------VARRKEELERVSEACKAKGAQDVIYTVQDLSSGEACSACVDETFNYYGGLDVVVNNAGVMYGQKLQEVTPEIFDHSMNLNIHSALRXTQXATKYLEKSKK----QP-AIVNVSSIAGLRAFPGALAYKISKAGLDQMTRCTALELISKGIRVNS 184
BLAST of short-chain dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000002347 (supercontig:LSalAtl2s:LSalAtl2s1446:53993:55015:-1 gene:EMLSAG00000002347 transcript:EMLSAT00000002347 description:"maker-LSalAtl2s1446-augustus-gene-0.15") HSP 1 Score: 66.6254 bits (161), Expect = 4.641e-13 Identity = 61/206 (29.61%), Postives = 87/206 (42.23%), Query Frame = 0
Query: 3 LFNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDG--TGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTE------DDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISP 200
+ G V VTG G+GR EGA+V + DL SS+G G + + E V N ++ FG L AV+N AG+ + N T+ +D+ V+ V+ GTF R AA + D Q I+NT S + GQA Y A+K + T A++LA G+R N I+P
Sbjct: 1 MLKGVVGFVTGGASGLGRATVERFVREGAKVTLVDLP-SSEGHKIAQKLGHENCLFQPVDITSPEQVHNA------------LEATRSQFGYLSAVVNCAGIAVGFVTYNHTKATSHGLEDFAKVINVNTIGTFNVIRLAAAQIAKNEPDADNQRGVIINTASVAAYEGQRGQAAYSASKGAVVGMTLPIARDLASIGIRVNTIAP 193
BLAST of short-chain dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000009319 (supercontig:LSalAtl2s:LSalAtl2s595:50362:51363:-1 gene:EMLSAG00000009319 transcript:EMLSAT00000009319 description:"maker-LSalAtl2s595-augustus-gene-0.32") HSP 1 Score: 62.7734 bits (151), Expect = 9.098e-12 Identity = 51/206 (24.76%), Postives = 91/206 (44.17%), Query Frame = 0
Query: 1 MGLFNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEI-----IAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTS-GSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISP 200
MG +G+V L+T A +GIGR+ AL+ A EGA+V D+ +A++ E+ I+ V N V + D+ I ++++ + N AG + +++ ED W +++ + + E K G I+N +S S + + YG K+ + FT+ A +L ++ +R N I P
Sbjct: 1 MGRLDGKVALITAAAQGIGRETALLFAKEGAKVYATDIN-------------EALLKELSNHEGISIFKLDVTNKEDVMNAKDS---ITESIDI------LFNCAGYVHHGSILDCDEDSWKRSFEINVDSMYYMCKAIVPSMIENKKGGS-----IINMSSICSSIKGLPNRFAYGTTKAAVIGFTKSLACDLVKHNIRVNCICP 179
BLAST of short-chain dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000004600 (supercontig:LSalAtl2s:LSalAtl2s23:382042:385343:-1 gene:EMLSAG00000004600 transcript:EMLSAT00000004600 description:"maker-LSalAtl2s23-augustus-gene-3.23") HSP 1 Score: 53.5286 bits (127), Expect = 2.819e-8 Identity = 35/125 (28.00%), Postives = 66/125 (52.80%), Query Frame = 0
Query: 8 VVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFG---DLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFG 129
+ LVTGA GIG+ + + EG V+ G+ T + A V ++ + + T VS+ + + + ++ +G D+ ++NNAG+++D L+ M ++D+D V+ V+LKG +G
Sbjct: 518 LALVTGAAGGIGQSICRVLSREGCSVI-----GTRMNTEKEDVVLSACVHDL--KDQKHASYTVDVSNAGEVKTLFSDVLKEYGRPPDI--IVNNAGIVKDGYLLKMKDEDFDKVIDVNLKGCYG 633
BLAST of short-chain dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000008813 (supercontig:LSalAtl2s:LSalAtl2s549:453537:455976:-1 gene:EMLSAG00000008813 transcript:EMLSAT00000008813 description:"maker-LSalAtl2s549-augustus-gene-4.8") HSP 1 Score: 51.6026 bits (122), Expect = 1.146e-7 Identity = 47/181 (25.97%), Postives = 77/181 (42.54%), Query Frame = 0
Query: 82 MIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPGATDRIDPDDPKW------QPAHPATLAVYLASPACRF-NGQVFRVFGSQV 255
+I + FG L ++NN G + +M+ W+ V+ +L GT+ +R A Y + K+G I T+ G + A+ GAA++ + + T+ A E + G+R N ++P T S + D PK P ++ +L SP F NG V G V
Sbjct: 237 VIDKVASEFGTLDFLVNNGGGQFPSLAADMSLKGWNAVIETNLNGTYLMSREA--YNQVFKKSGGSIVNIIAQTSRGFPMMAHT-----GAARAAVENLTKTLALEWSENGIRVNCVAPGPVFSKTASDNYSYDLFSSLTPKLPTKRCGTPDEVSSTVCFLLSPGASFVNGATLVVDGGSV 410
BLAST of short-chain dehydrogenase vs. SwissProt
Match: gi|81671903|sp|P96825.3|Y0148_MYCTU (RecName: Full=Putative short-chain type dehydrogenase/reductase Rv0148) HSP 1 Score: 182.57 bits (462), Expect = 5.941e-55 Identity = 110/257 (42.80%), Postives = 152/257 (59.14%), Query Frame = 0
Query: 8 VVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPGATDRIDPDD-PKWQPAHPATLAVYLASPACRFNGQVFRVFGSQVTLQQSWGH 263
V++VTGAG G+GR+ AL A EGA VVVNDLGG+ DGTG+ + A VV EI GG AVAN SV++ A +I+ A++ FG +H V++NAG+LRD M+ ++WD V+ VHL G + R A ++RE++ R+V TS SGL+ N GQ NYGAAK G+ A E A+Y + ANA++P+AATRMT D + P+ K P A + YL + C N V+ V G +V +G+
Sbjct: 8 VIVVTGAGGGLGREYALTLAGEGASVVVNDLGGARDGTGAGSAMADEVVAEIRDKGGRAVANYDSVATEDGAANIIKTALDEFGAVHGVVSNAGILRDGTFHKMSFENWDAVLKVHLYGGYHVLRAAWPHFREQSYG------RVVVATSTSGLFGNFGQTNYGAAKLGLVGLINTLALEGAKYNIHANALAPIAATRMT------QDILPPEVLEKLTPEFVAPVVAYLCTEECADNASVYVVGGGKVQRVALFGN 252
BLAST of short-chain dehydrogenase vs. SwissProt
Match: gi|1708156|sp|P22414.2|FOX2_CANTR (RecName: Full=Peroxisomal hydratase-dehydrogenase-epimerase; Short=HDE; AltName: Full=Multifunctional beta-oxidation protein; Short=MFP; Includes: RecName: Full=2-enoyl-CoA hydratase; Includes: RecName: Full=(3R)-3-hydroxyacyl-CoA dehydrogenase) HSP 1 Score: 194.126 bits (492), Expect = 6.044e-55 Identity = 113/264 (42.80%), Postives = 164/264 (62.12%), Query Frame = 0
Query: 4 FNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSV--PGATDRIDPDDPKWQPAHPATLAVYLASPACRFNGQVFRV---FGSQVTLQQSWG 262
F +VV++TGAG G+G+ +L A GA+VVVNDLGG+ +G G ++ A VVDEI+ GG AVA+ +V D + +++ AV+ FG +H +INNAG+LRD + MTE D+ V+ VHL G F T+ A Y+ ++ K G RIVNT+S +GLY N GQANY +AKS + F + AKE A+Y ++ANAI+P+A +RMT S+ P +++ P+ A L +YL+S GQ F V F +Q+ ++S G
Sbjct: 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNV---LDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYF-QKQKYG-----RIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPLARSRMTESILPPPMLEKLGPE-------KVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGG 253 HSP 2 Score: 156.762 bits (395), Expect = 9.468e-42 Identity = 95/246 (38.62%), Postives = 140/246 (56.91%), Query Frame = 0
Query: 7 EVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPGATDRIDPDDPKWQPAHPATLAVYLASPACRFNGQVFRVFG 252
+VVL+TGAG G+G++ A A GA+VVVND D T + VDEI AAGGEA + V+ D+EA+I+ ++ +G + ++NNAG+LRDR M++ +WD+V VHL GTF +R A Y+ E+ Q RI+N TS SG+Y N GQANY ++K+GI ++ A E A+ ++ N ++P A T MTL++ D+ + A L VYL + G+ F + G
Sbjct: 323 KVVLITGAGAGLGKEYAKWFAKYGAKVVVNDF---KDATKT--------VDEIKAAGGEAWPDQHDVAK--DSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK------QFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHAETAMTLTIFREQDK-----NLYHADQVAPLLVYLGTDDVPVTGETFEIGG 544
BLAST of short-chain dehydrogenase vs. SwissProt
Match: gi|74945278|sp|Q9NKW1.1|MFEA_DICDI (RecName: Full=Peroxisomal multifunctional enzyme A; Short=MFE-A; AltName: Full=MFE-1; Includes: RecName: Full=3-hydroxyacyl-CoA dehydrogenase) HSP 1 Score: 180.259 bits (456), Expect = 2.263e-52 Identity = 113/264 (42.80%), Postives = 152/264 (57.58%), Query Frame = 0
Query: 4 FNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSV--PGATDRIDPDDPKWQPAHPATLAVYLASPACRFNGQVFRV---FGSQVTLQQSWG 262
F +VV+VTGAG GIG+ AL A GA+VVVNDLGGS G GS + A VV+EI AAGG AVAN SV D E ++Q A+++FG + +INNAG+LRD MT+ DWD V VH KG + +R A + RE+ RI+ T+S +GLY N GQANYG+ K + + A+E + N I+P+AA+R+T SV P +++ PD + L +YL G VF V + S+V LQ+S G
Sbjct: 5 FKDKVVIVTGAGGGIGKVYALEFAKRGAKVVVNDLGGSHTGQGSSSKAADKVVEEIKAAGGTAVANYDSVE---DGEKIVQTAMDSFGGVDILINNAGILRDVSFGKMTDGDWDLVYRVHAKGAYKLSRAAWNHMREK------NFGRIIMTSSAAGLYGNFGQANYGSMKMALVGLSNTLAQEGKSKNIHCNTIAPIAASRLTESVMPPEILEQMKPD-------YIVPLVLYLCHQDTTETGGVFEVGAGWVSKVRLQRSAG 252
BLAST of short-chain dehydrogenase vs. SwissProt
Match: gi|75027680|sp|Q9VXJ0.1|DHB4_DROME (RecName: Full=Peroxisomal multifunctional enzyme type 2; Short=DmMFE-2; Includes: RecName: Full=(3R)-hydroxyacyl-CoA dehydrogenase; Includes: RecName: Full=Enoyl-CoA hydratase 2) HSP 1 Score: 178.718 bits (452), Expect = 1.572e-50 Identity = 107/244 (43.85%), Postives = 142/244 (58.20%), Query Frame = 0
Query: 4 FNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPGATDRIDPDD--PKWQPAHPATLAVYLASPACRFNG 245
++G V +VTGAG G+GR+ AL+ A GA+VVVNDLGG+ G G+ A VVDEI AGGEAVA+ SV D +I+ A++ FG + ++NNAG+LRDR LV +E DW+ V VHLKG+F T+ A Y +++ RI+ T+S SG+Y N GQ NY AAK G+ A E AR V N I P AA+RM T+ I PD + +P A + YL +C NG
Sbjct: 10 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSV---IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYG------RIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRM-------TEGILPDILFNELKPKLIAPVVAYLCHESCEDNG 237
BLAST of short-chain dehydrogenase vs. SwissProt
Match: gi|94730372|sp|P51660.3|DHB4_MOUSE (RecName: Full=Peroxisomal multifunctional enzyme type 2; Short=MFE-2; AltName: Full=17-beta-hydroxysteroid dehydrogenase 4; Short=17-beta-HSD 4; AltName: Full=D-bifunctional protein; Short=DBP; AltName: Full=Multifunctional protein 2; Short=MPF-2; Contains: RecName: Full=(3R)-hydroxyacyl-CoA dehydrogenase; Contains: RecName: Full=Enoyl-CoA hydratase 2; AltName: Full=3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase) HSP 1 Score: 177.178 bits (448), Expect = 2.965e-49 Identity = 105/249 (42.17%), Postives = 143/249 (57.43%), Query Frame = 0
Query: 4 FNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPGATDRIDPDD--PKWQPAHPATLAVYLASPACRFNGQVFRV 250
F+G VVLVTGAG G+GR AL A GA V+VNDLGG G G + A VV EI GG+AVAN SV + E +++ A++TFG + V+NNAG+LRDR ++++DWD + VHL+G+F TR A W K + RI+ T+S SG+Y N GQANY AAK GI A E + + N I+P A +RM T+ + P+D +P + A L ++L +C NG +F V
Sbjct: 7 FDGRVVLVTGAGGGLGRAYALAFAERGALVIVNDLGGDFKGIGKGSSAADKVVAEIRRKGGKAVANYDSVEA---GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIHRVHLRGSFQVTRAA---WDHMKK---QNYGRILMTSSASGIYGNFGQANYSAAKLGILGLCNTLAIEGRKNNIHCNTIAPNAGSRM-------TETVLPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEV 239
BLAST of short-chain dehydrogenase vs. SwissProt
Match: gi|1706396|sp|P51659.3|DHB4_HUMAN (RecName: Full=Peroxisomal multifunctional enzyme type 2; Short=MFE-2; AltName: Full=17-beta-hydroxysteroid dehydrogenase 4; Short=17-beta-HSD 4; AltName: Full=D-bifunctional protein; Short=DBP; AltName: Full=Multifunctional protein 2; Short=MPF-2; AltName: Full=Short chain dehydrogenase/reductase family 8C member 1; Contains: RecName: Full=(3R)-hydroxyacyl-CoA dehydrogenase; Contains: RecName: Full=Enoyl-CoA hydratase 2; AltName: Full=3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase) HSP 1 Score: 176.407 bits (446), Expect = 4.607e-49 Identity = 105/249 (42.17%), Postives = 144/249 (57.83%), Query Frame = 0
Query: 4 FNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPGATDRIDPDD--PKWQPAHPATLAVYLASPACRFNGQVFRV 250
F+G VVLVTGAG G+GR AL A GA VVVNDLGG G G + A VV+EI GG+AVAN SV + E +++ A++ FG + V+NNAG+LRDR ++++DWD + VHL+G+F TR A W K ++ RI+ T+S SG+Y N GQANY AAK G+ A E + + N I+P A +RMT +V P+D +P + A L ++L +C NG +F V
Sbjct: 7 FDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAVANYDSVE---EGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSFQVTRAA---WEHMKK---QKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAPNAGSRMTQTVM-------PEDLVEALKPEYVAPLVLWLCHESCEENGGLFEV 239
BLAST of short-chain dehydrogenase vs. SwissProt
Match: gi|2492741|sp|P97852.3|DHB4_RAT (RecName: Full=Peroxisomal multifunctional enzyme type 2; Short=MFE-2; AltName: Full=17-beta-hydroxysteroid dehydrogenase 4; Short=17-beta-HSD 4; AltName: Full=D-bifunctional protein; Short=DBP; AltName: Full=Multifunctional protein 2; Short=MPF-2; Contains: RecName: Full=(3R)-hydroxyacyl-CoA dehydrogenase; Contains: RecName: Full=Enoyl-CoA hydratase 2; AltName: Full=3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase) HSP 1 Score: 176.407 bits (446), Expect = 4.662e-49 Identity = 104/249 (41.77%), Postives = 142/249 (57.03%), Query Frame = 0
Query: 4 FNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPGATDRIDPDD--PKWQPAHPATLAVYLASPACRFNGQVFRV 250
F+G VVLVTGAG G+GR AL A GA VVVNDLGG G G + A VV+EI GG+AVAN SV + E +++ A++TFG + V+NNAG+LRDR ++++DWD + VHL+G+F TR A W K + RI+ T S SG+Y N GQANY AAK G+ E + + N I+P A +RM T+ + P+D +P + A L ++L +C NG +F V
Sbjct: 7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEA---GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAA---WDHMKK---QNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRM-------TETVMPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEV 239
BLAST of short-chain dehydrogenase vs. SwissProt
Match: gi|399508|sp|Q02207.1|FOX2_YEAST (RecName: Full=Peroxisomal hydratase-dehydrogenase-epimerase; Short=HDE; AltName: Full=Multifunctional beta-oxidation protein; Short=MFP; Includes: RecName: Full=2-enoyl-CoA hydratase; Includes: RecName: Full=(3R)-3-hydroxyacyl-CoA dehydrogenase) HSP 1 Score: 172.555 bits (436), Expect = 2.428e-47 Identity = 108/265 (40.75%), Postives = 158/265 (59.62%), Query Frame = 0
Query: 4 FNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSV--PGATDRIDPDDPKWQPAHPATLAVYLASPACRFNGQVFRV---FGSQVTLQQSWGH 263
F VV++TGAG G+G+ AL A+ GA+VVVNDLGG+ G+G ++ A VVDEI AGG AVAN SV+ + E +I+ A++ FG + +INNAG+LRD MTE ++ +V+ VHL G + +R A Y R + K G RI+NT S +GL+ N GQANY AAK G+ + AKE A+Y + N+I+P+A +RMT +V P ++ P+ K P L +YL + + + +F + F Q+ ++S G
Sbjct: 7 FKDRVVVITGAGGGLGKVYALAYASRGAKVVVNDLGGTLGGSGHNSKAADLVVDEIKKAGGIAVANYDSVNE--NGEKIIETAIKEFGRVDVLINNAGILRDVSFAKMTEREFASVVDVHLTGGYKLSRAAWPYMRSQ-KFG-----RIINTASPAGLFGNFGQANYSAAKMGLVGLAETLAKEGAKYNINVNSIAPLARSRMTENVLPPHILKQLGPE--KIVP-----LVLYLTHESTKVSNSIFELAAGFFGQLRWERSSGQ 256 HSP 2 Score: 94.7449 bits (234), Expect = 1.907e-20 Identity = 85/256 (33.20%), Postives = 126/256 (49.22%), Query Frame = 0
Query: 20 RDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPGATDRIDPDDPKWQPAHPATLAVYLASPAC------RFNGQVFRVFG---SQVTLQQSWGHTDL 266
+ A+ A GA+VVVND+ +VV+EI GE A S +A +IQ A+ F + ++NNAG+LRD+ + M +++W V+ VHL TF ++ W K ++ I+NTTS SG+Y N GQANY AAK+ I F++ A E A+ G+ N I+P A T MT ++ + + D + + L V LAS R GQ+F V G Q Q+S G+ +
Sbjct: 336 KSHAIWFARYGAKVVVNDIKDPF-----------SVVEEINKLYGEGTAIPDSHDVVTEAPLIIQTAISKFQRVDILVNNAGILRDKSFLKMKDEEWFAVLKVHLFSTFSLSK---AVWPIFTK---QKSGFIINTTSTSGIYGNFGQANYAAAKAAILGFSKTIALEGAKRGIIVNVIAPHAETAMTKTIFSEKELSNHFD----ASQVSPLVVLLASEELQKYSGRRVIGQLFEVGGGWCGQTRWQRSSGYVSI 570
BLAST of short-chain dehydrogenase vs. SwissProt
Match: gi|3929350|sp|Q01373.1|FOX2_NEUCR (RecName: Full=Peroxisomal hydratase-dehydrogenase-epimerase; Short=HDE; AltName: Full=Multifunctional beta-oxidation protein; Short=MFP; Includes: RecName: Full=2-enoyl-CoA hydratase; Includes: RecName: Full=(3R)-3-hydroxyacyl-CoA dehydrogenase) HSP 1 Score: 163.31 bits (412), Expect = 5.303e-44 Identity = 112/284 (39.44%), Postives = 166/284 (58.45%), Query Frame = 0
Query: 4 FNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPGATDRIDPDDPKWQPAHPATLAVYLASPACRFNGQVFRVFGSQVTLQQSWGHTDLAVSGGEAPWEPGALAEALESI 287
F+G+VV+VTGAG G+G+ L + GA VVVNDLG S G G+ T A VV+EI AAGG+AVAN SV + + +I+ A++ FG + +INNAG+LRD NM ++DWD + VH+KG++ R A Y+R++ K G R++NT S +GL+ N GQANY AAK G+ FT+ AKE +Y + +N I+P+AA+RMT +V D + P+W +AV + G +F V G V + W + + + + PGA+ + + +
Sbjct: 7 FDGQVVVVTGAGGGLGKAYCLFFGSRGASVVVNDLGASFKGEGNSTKAADVVVNEIKAAGGKAVANYDSVE---NGDKIIETAIKEFGRIDILINNAGILRDISFKNMKDEDWDLIFKVHVKGSYKTARAAWPYFRKQ-KFG-----RVINTASAAGLFGNFGQANYSAAKLGMVGFTETLAKEGLKYNIISNVIAPIAASRMTETVM-PPDLLALMKPEWV---VPLVAVLVHKNNTSETGSIFEVGGGHVA-KLRWERSSGLLLKADESYTPGAIIKKWDQV 276 HSP 2 Score: 148.673 bits (374), Expect = 5.996e-39 Identity = 105/267 (39.33%), Postives = 145/267 (54.31%), Query Frame = 0
Query: 4 FNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPGATDRIDPDD--PKWQPAHPATLAVYLASPAC--RFNGQVFRV---FGSQVTLQQSWGH 263
F G V LVTG G GIGR L A GA VVVNDL D VV+EI GG+AV G+ S D +A+++ A++ FG + V+NNAG+LRD+ NM + WD VM VH +GT+ T+ A Y+ ++ K G R++NTTS SG+Y N GQANY AAK I F++ A E A+Y + N I+P A T MT + I P++ ++P + A L + L S + G ++ V + Q Q+S GH
Sbjct: 312 FKGRVALVTGGGAGIGRAYCLAFARAGASVVVNDLVNPDD-----------VVNEIKKMGGKAV---GAKFSAEDGDAVVKAAIDAFGRVDIVVNNAGILRDKAFHNMDDSLWDPVMNVHARGTYKVTKAAWPYFLKQ-KYG-----RVLNTTSTSGIYGNFGQANYSAAKCAILGFSRAIALEGAKYNIYVNTIAPNAGTAMTKT-------ILPEELVQAFKPDYVAPLVLALCSDKVPKKPTGGLYEVGSGWCGQTRWQRSGGH 551
BLAST of short-chain dehydrogenase vs. SwissProt
Match: gi|3915689|sp|P51831.3|FABG_BACSU (RecName: Full=3-oxoacyl-[acyl-carrier-protein] reductase FabG; AltName: Full=3-ketoacyl-acyl carrier protein reductase; AltName: Full=Beta-Ketoacyl-acyl carrier protein reductase; AltName: Full=Beta-ketoacyl-ACP reductase) HSP 1 Score: 142.895 bits (359), Expect = 4.997e-40 Identity = 93/259 (35.91%), Postives = 140/259 (54.05%), Query Frame = 0
Query: 3 LFNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISP-VAATRMTLSV-PGATDRIDPDDPKW---QPAHPATLAVYLASPACRF-NGQVFRVFGSQV 255
+ N + +VTGA RGIGR AL A GA VVVN G + A VVDEI + G +A+A VS+ D + MI++ + F + ++NNAG+ RD +++ M ED+WD V+ ++LKG F T+ R+ K ++ RI+N +S G+ N GQANY AAK+G+ T+ +AKELA + NAI+P +T MT + D + P +P+ +++ +LAS R+ GQ + G V
Sbjct: 1 MLNDKTAIVTGASRGIGRSIALDLAKSGANVVVNYSGNEA--------KANEVVDEIKSMGRKAIAVKADVSNPEDVQNMIKETLSVFSTIDILVNNAGITRDNLIMRMKEDEWDDVININLKGVFNCTK---AVTRQMMK---QRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAKDVQDEMLKQIPLARFGEPSDVSSVVTFLASEGARYMTGQTLHIDGGMV 245
BLAST of short-chain dehydrogenase vs. nr
Match: gi|491390691|ref|WP_005248563.1| (KR domain-containing protein [Rhodococcus opacus] >gi|356661534|gb|EHI41845.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Rhodococcus opacus PD630] >gi|589063068|gb|AHK27927.1| Peroxisomal hydratase-dehydrogenase-epimerase [Rhodococcus opacus PD630]) HSP 1 Score: 324.709 bits (831), Expect = 9.984e-108 Identity = 166/295 (56.27%), Postives = 207/295 (70.17%), Query Frame = 0
Query: 1 MGLFNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPG----ATDRIDPDDPKWQPAHPATLAVYLASPACRFNGQVFRVFGSQVTLQQSWGHTDLAVSGGEAPWEPGALAEALESIPAEA 291
MG G V ++TG GRG+GR+ AL+ AAEGA+VVVNDLGGS++G+GSD AQ+VVDEI A GGEAVAN SV+ W A +I A++TFGDLH V+NNAG+LRDR+LVNM+ED++D+V+ VHLKGTF TRHAA YWR AK G E R ++NT+SGSGL+ N GQ NYGAAK+GIA+ TQIA+KEL RY VRAN I+PVA TR+T + PG T+ I D W PA+ + L LAS C F G FRV G +V L Q W D S ++ W LA A + +PA+A
Sbjct: 1 MGSLEGRVAVITGGGRGLGREHALLFAAEGAKVVVNDLGGSAEGSGSDVSAAQSVVDEITALGGEAVANGDSVTDWEGARRLIATAIDTFGDLHIVVNNAGILRDRLLVNMSEDEFDSVINVHLKGTFAVTRHAAEYWRAEAKKGVETDRSLINTSSGSGLHGNPGQTNYGAAKAGIAAMTQIASKELERYHVRANCIAPVARTRLTEATPGLGQVMTETIGSDFDSWHPANISPLVALLASAKCEFTGHAFRVMGGEVGLYQGWTVVDQVES--DSRWTVEGLAAATKHMPAKA 293
BLAST of short-chain dehydrogenase vs. nr
Match: gi|1005623126|ref|WP_061699402.1| (KR domain-containing protein [Rhodococcus sp. LB1] >gi|1003477621|gb|KXX58821.1| short-chain dehydrogenase [Rhodococcus sp. LB1]) HSP 1 Score: 323.168 bits (827), Expect = 4.037e-107 Identity = 165/295 (55.93%), Postives = 206/295 (69.83%), Query Frame = 0
Query: 1 MGLFNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPG----ATDRIDPDDPKWQPAHPATLAVYLASPACRFNGQVFRVFGSQVTLQQSWGHTDLAVSGGEAPWEPGALAEALESIPAEA 291
MG G V ++TG GRG+GR+ AL+ AAEGA+VVVNDLGGS++G+GSD AQ+VVDEI A GGEAVAN SV+ W A +I A++TFGDLH ++NNAG+LRDR+LVNM+ED++D+V+ VHLKGTF TRHAA YWR AK G E R ++NT+SGSGL+ N GQ NYGAAK+GIA+ TQIA+KEL RY VRAN I+PVA TR+T + PG T+ I D W PA+ + L LAS C F G FRV G +V L Q W D S + W LA A + +PA+A
Sbjct: 1 MGSLEGRVAVITGGGRGLGREHALLFAAEGAKVVVNDLGGSAEGSGSDVSAAQSVVDEITALGGEAVANGDSVTDWEGARRLIATAIDTFGDLHILVNNAGILRDRLLVNMSEDEFDSVINVHLKGTFAVTRHAAEYWRAEAKKGVETDRSLINTSSGSGLHGNPGQTNYGAAKAGIAAMTQIASKELERYHVRANCIAPVARTRLTEATPGLGQVMTETIGSDFDSWHPANISPLVALLASAKCEFTGHAFRVMGGEVGLYQGWTVVDQVES--DTRWTVEGLAAATKHMPAKA 293
BLAST of short-chain dehydrogenase vs. nr
Match: gi|648611594|ref|WP_026303345.1| (KR domain-containing protein [Gordonia kroppenstedtii]) HSP 1 Score: 321.627 bits (823), Expect = 1.615e-106 Identity = 170/294 (57.82%), Postives = 206/294 (70.07%), Query Frame = 0
Query: 1 MGLFNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPG----ATDRIDPDDPKWQPAHPATLAVYLASPACRFNGQVFRVFGSQVTLQQSWGHTDLAVSGGEAPWEPGALAEALESIPAE 290
MG +G V ++TG GRG+GR+ AL+ A EGA+VVVNDLGG G GSD AQAV DEI+ AGGEAVANT SV+ W A +I+ AV+ FGDLH V+NNAG+LRDR LVNM+ED++DTV+ VHLKGTF TRHAA YWRE+AK G + R ++NT+SGSGL+ N GQANY +AK+GIA+ TQIAAKELARY VRANAI+PVA TR+T PG T+ I D +W PA+ + L LA+ CRF GQVFRV G V L Q W D S + W LA A +PAE
Sbjct: 1 MGTLDGRVAVITGGGRGLGREHALLFAKEGAKVVVNDLGGGPAGEGSDISAAQAVADEIVDAGGEAVANTDSVTDWEGARRLIRSAVDAFGDLHVVVNNAGILRDRTLVNMSEDEFDTVVNVHLKGTFAVTRHAAEYWREQAKNGIDVDRVLINTSSGSGLHGNPGQANYASAKAGIAAMTQIAAKELARYHVRANAIAPVARTRLTEQTPGLGQVMTESIGADFDEWHPANISPLVAMLAAADCRFTGQVFRVSGGDVGLYQGWTVVDRVSS--DKRWAIDDLAAATAHMPAE 292
BLAST of short-chain dehydrogenase vs. nr
Match: gi|684284521|gb|KGA04404.1| (putative oxidoreductase [actinobacterium acAcidi]) HSP 1 Score: 320.857 bits (821), Expect = 1.629e-106 Identity = 164/295 (55.59%), Postives = 211/295 (71.53%), Query Frame = 0
Query: 1 MGLFNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPGATDRID-PDDP----KWQPAHPATLAVYLASPACRFNGQVFRVFGSQVTLQQSWGHTDLAVSGGEAPWEPGALAEALESIPAE 290
MG +G V ++TGAGRGIGR+ AL+ AAEGA+VVVNDLGG++DG+G D PAQ VV+EI A GGEAVAN +V+ W A+ MI AVETFGDL ++NNAG+LRDR+LVNMTE +WD V+ VHLKG F P+R AA YWRE+ KAG + R IV+T+S SGL++N GQ+NYGAAK+GIA+F+QI AKEL+RY V++N+I+P A TR+TL+ PG DRI P D +W PA+ + L YL+S AC F G+ F V +VT +SW + WE L EAL ++ AE
Sbjct: 1 MGALDGRVAIITGAGRGIGREHALLFAAEGAKVVVNDLGGANDGSGEDAAPAQQVVNEIKAMGGEAVANFDNVADWEGAQRMINAAVETFGDLDILVNNAGILRDRVLVNMTESEWDAVITVHLKGHFAPSRWAAAYWREQFKAGVTKQRHIVHTSSTSGLFSNPGQSNYGAAKTGIATFSQILAKELSRYNVKSNSIAPGARTRLTLATPGLGDRIGAPTDAAKFDEWDPANISPLVCYLSSEACEFTGETFYVAAGEVTRIKSWERAETVNQNDR--WEVSKLTEALNAMAAE 293
BLAST of short-chain dehydrogenase vs. nr
Match: gi|1120498635|ref|WP_073359094.1| (KR domain-containing protein [Rhodococcus jostii] >gi|1089580484|emb|SED56075.1| NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Rhodococcus jostii]) HSP 1 Score: 321.242 bits (822), Expect = 1.943e-106 Identity = 165/295 (55.93%), Postives = 206/295 (69.83%), Query Frame = 0
Query: 1 MGLFNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPG----ATDRIDPDDPKWQPAHPATLAVYLASPACRFNGQVFRVFGSQVTLQQSWGHTDLAVSGGEAPWEPGALAEALESIPAEA 291
MG G V ++TG GRG+GR+ AL+ AAEGA+VVVNDLGGS++G GSD AQ+VVDEI A GGEAVAN SV+ W A +I A++TFGDLH ++NNAG+LRDR+LVNM+ED++D+V+ VHLKGTF TRHAA YWR AK G E R ++NT+SGSGL+ N GQ NYGAAK+GIA+ TQIA+KEL RY VRAN I+PVA TR+T + PG T+ I D W PA+ + L LAS C F G FRV G +V L Q W D S ++ W LA A + +PA+A
Sbjct: 1 MGSLEGRVAVITGGGRGLGREHALLFAAEGAKVVVNDLGGSAEGGGSDVSAAQSVVDEITALGGEAVANGDSVTDWEGARRLIATAIDTFGDLHILVNNAGILRDRLLVNMSEDEFDSVINVHLKGTFAVTRHAAEYWRAEAKKGVEIDRSLINTSSGSGLHGNPGQTNYGAAKAGIAAMTQIASKELERYHVRANCIAPVARTRLTEATPGLGQVMTETIGSDFDSWHPANISPLVALLASEKCEFTGHAFRVMGGEVGLYQGWTVVDQVES--DSRWTVEGLAAATKHMPAKA 293
BLAST of short-chain dehydrogenase vs. nr
Match: gi|1272473257|gb|PHX71311.1| (short-chain dehydrogenase [Acidimicrobium sp.]) HSP 1 Score: 320.857 bits (821), Expect = 2.026e-106 Identity = 163/295 (55.25%), Postives = 211/295 (71.53%), Query Frame = 0
Query: 1 MGLFNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPGATDRID-PDDP----KWQPAHPATLAVYLASPACRFNGQVFRVFGSQVTLQQSWGHTDLAVSGGEAPWEPGALAEALESIPAE 290
MG +G V ++TGAGRGIGR+ AL+ AAEGA+VVVNDLGG++DG+G D PAQ VV+EI A GGEA+AN +V+ W A+ MI AVETFGDL ++NNAG+LRDR+LVNMTE +WD V+ VHLKG F P+R AA YWRE+ KAG + R IV+T+S SGL++N GQ+NYGAAK+GIA+F+QI AKEL+RY V++N+I+P A TR+TL+ PG DRI P D +W PA+ + L YL+S AC F G+ F V +VT +SW + WE L EAL ++ AE
Sbjct: 1 MGALDGRVAIITGAGRGIGREHALLFAAEGAKVVVNDLGGANDGSGEDAAPAQQVVNEIKAMGGEAIANFDNVADWEGAQRMINAAVETFGDLDILVNNAGILRDRVLVNMTESEWDAVITVHLKGHFAPSRWAAAYWREQFKAGVTKQRHIVHTSSTSGLFSNPGQSNYGAAKTGIATFSQILAKELSRYNVKSNSIAPGARTRLTLATPGLGDRIGVPTDAAKFDEWDPANISPLVCYLSSEACEFTGETFYVAAGEVTRIKSWERAETVNQNDR--WEVSKLTEALNAMAAE 293
BLAST of short-chain dehydrogenase vs. nr
Match: gi|517353300|ref|WP_018528792.1| (KR domain-containing protein [Streptomyces sp. HmicA12]) HSP 1 Score: 318.931 bits (816), Expect = 1.668e-105 Identity = 166/293 (56.66%), Postives = 204/293 (69.62%), Query Frame = 0
Query: 1 MGLFNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPG----ATDRIDPDDPKWQPAHPATLAVYLASPACRFNGQVFRVFGSQVTLQQSWGHTDLAVSGGEAPWEPGALAEALESIPA 289
MG +G V ++TG GRG+GR+ AL+ AAEGA++VVNDLGG+ DG G+D AQAVVDEI A GGEAVANT SVS WA A +I AVETFGDLH V+NNAG+LRDR+LVNM+E+++DTV+ VHLKGTF RHAA YWR +AK+G E R ++NT+SGSGL+ N GQ NY +AK+GIA+ TQIAAKEL RY VR+N I+PVA TR+T++ PG T + W P + + L LAS CRF+G FRV G QV L Q W D S E W LA A +PA
Sbjct: 1 MGTLDGRVAVITGGGRGLGREHALLFAAEGAKIVVNDLGGAPDGAGADISAAQAVVDEIKALGGEAVANTDSVSDWAGAARLIDTAVETFGDLHVVVNNAGILRDRVLVNMSEEEFDTVIDVHLKGTFAVARHAAAYWRAQAKSGVETDRSLINTSSGSGLHGNPGQVNYASAKAGIAALTQIAAKELQRYHVRSNCIAPVARTRLTVATPGFGEVMTSTQNAAFDTWHPGNISPLVAMLASADCRFSGHAFRVSGGQVGLYQGWTMVDEVKS--EQRWTVEELASATAHMPA 291
BLAST of short-chain dehydrogenase vs. nr
Match: gi|684286601|gb|KGA06413.1| (putative oxidoreductase [actinobacterium acAcidi]) HSP 1 Score: 316.235 bits (809), Expect = 9.212e-105 Identity = 156/290 (53.79%), Postives = 208/290 (71.72%), Query Frame = 0
Query: 1 MGLFNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPGATDRIDPDDPK---WQPAHPATLAVYLASPACRFNGQVFRVFGSQVTLQQSWGHTDLAVSGGEAPWEPGALAEALESI 287
MG +G V ++TGAGRG+GR+ AL+ AAEGA++VVNDLGG++DG+GSD PAQ V +I A GGEA+ NT +V+ W ++ MI A+E FGDL ++NNAG+LRDR+LVNM+E +WD V+ VHLKG F PT HAA YWRE+AKAG +PR +V+T+S SGL++N GQANYGAAKSGIA+F+QI AKEL+RY V++NAI+P A TR+T++ PG D + D K W PA+ + L YLAS C F+G+ F V G QVT +W + + W ALA A+ ++
Sbjct: 1 MGALDGRVAIITGAGRGLGREHALLFAAEGAKIVVNDLGGANDGSGSDMTPAQQTVADIKAMGGEAIVNTDNVADWEGSKRMIDSAIEAFGDLDILVNNAGILRDRVLVNMSEAEWDAVIQVHLKGHFAPTHHAAAYWREQAKAGITKPRNLVHTSSTSGLFSNPGQANYGAAKSGIATFSQICAKELSRYNVKSNAIAPAARTRLTMATPGLEDVMAAKDGKFDEWDPANVSPLVAYLASELCEFSGETFYVQGGQVTRVATWAMAEEIKQ--DDRWTVSALATAISAL 288
BLAST of short-chain dehydrogenase vs. nr
Match: gi|937177314|ref|WP_054569714.1| (KR domain-containing protein [Frankia sp. R43] >gi|936565884|gb|KPM51942.1| short-chain dehydrogenase [Frankia sp. R43]) HSP 1 Score: 313.538 bits (802), Expect = 1.308e-103 Identity = 158/264 (59.85%), Postives = 197/264 (74.62%), Query Frame = 0
Query: 1 MGLFNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPGATDRID--PDD-PKWQPAHPATLAVYLASPACRFNGQVFRVFGSQVTLQQSW 261
MG NG V ++TGAGRG+GRD AL+ A EGA VVVND+GG + PA VV EI AAGGEAVA+T SV+ W A+ ++ AV TFGDLH V+NNAG+LRDRMLVNMTED+WD+V++VHLKG F TRHAA YWRE++KA R +++TTS SGL+AN GQANYGAAKSGIASF+QIAAKEL R+GVR+N+++PVA TR+TLS+PG ++I P+ KW PA+ + L YLA+ C F G+ F V G Q+T QSW
Sbjct: 1 MGKLNGRVAVITGAGRGLGRDHALLFATEGAMVVVNDVGG-------EASPAHDVVAEIRAAGGEAVAHTESVTEWDAAKRLVDMAVRTFGDLHVVVNNAGILRDRMLVNMTEDEWDSVISVHLKGHFCVTRHAAAYWREQSKANATVDRSLIHTTSTSGLFANPGQANYGAAKSGIASFSQIAAKELGRFGVRSNSVAPVARTRLTLSIPGVGEKIAEVPEGFDKWDPANVSPLIAYLATEQCEFTGETFNVIGGQITRIQSW 257
BLAST of short-chain dehydrogenase vs. nr
Match: gi|505253723|ref|WP_015440825.1| (KR domain-containing protein [Ilumatobacter coccineus] >gi|464098696|dbj|BAN01578.1| putative oxidoreductase [Ilumatobacter coccineus YM16-304]) HSP 1 Score: 307.76 bits (787), Expect = 2.288e-101 Identity = 164/299 (54.85%), Postives = 208/299 (69.57%), Query Frame = 0
Query: 1 MGLFNGEVVLVTGAGRGIGRDEALIAAAEGARVVVNDLGGSSDGTGSDTGPAQAVVDEIIAAGGEAVANTGSVSSWADAEAMIQQAVETFGDLHAVINNAGVLRDRMLVNMTEDDWDTVMAVHLKGTFGPTRHAAGYWRERAKAGDEQPRRIVNTTSGSGLYANVGQANYGAAKSGIASFTQIAAKELARYGVRANAISPVAATRMTLSVPGATDRIDPDDPK---WQPAHPATLAVYLASPACRFNGQVFRVFGSQVTLQQSWGHTDLAVSGGEAPWEPGALAEALESIPAEAPLNRP 296
M +G V ++TGAGRGIGR+ AL A++GARVVVNDLGG++DG GSD PA+ V EI AAGGEA+AN +V+ W AE M+Q A++ +GDL ++NNAG+LRDR +VNMTE +WD V+AVH+KG F PTRHAA YWR KAG + R +VNT+S SGL++N GQANYGAAKSGIA+F+QIAAKEL RYGV +N I+P A TR+TL+ PG + + PD P W PA+ + L YL++ C FNG+ F V G V +SW +D +V E W LAEAL APL P
Sbjct: 1 MTSLDGRVAIITGAGRGIGREHALYFASQGARVVVNDLGGANDGAGSDDTPAEEVAAEIRAAGGEAIANHDNVADWTGAEQMVQTAIDAYGDLDILVNNAGILRDRTIVNMTEAEWDDVVAVHMKGHFVPTRHAAVYWRAEHKAGRSKRRNLVNTSSTSGLFSNPGQANYGAAKSGIATFSQIAAKELERYGVVSNCIAPGARTRLTLATPGLEEIMSPDGPGFDVWDPANISPLVAYLSTEQCAFNGETFFVQGGAVKRVESWMMSD-SVEQSER-WTVEGLAEAL------APLADP 291 The following BLAST results are available for this feature:
BLAST of short-chain dehydrogenase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 6
BLAST of short-chain dehydrogenase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of short-chain dehydrogenase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold9021_size2533:248..1138- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold9021_size2533-processed-gene-0.0 ID=snap_masked-scaffold9021_size2533-processed-gene-0.0|Name=short-chain dehydrogenase|organism=Tigriopus kingsejongensis|type=gene|length=891bp|location=Sequence derived from alignment at scaffold9021_size2533:248..1138- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'short-chain dehydrogenase' has the following synonyms
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