EMLSAG00000001712, EMLSAG00000001712-684478 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001712
Unique NameEMLSAG00000001712-684478
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000001712 vs. GO
Match: - (symbol:Sirup "Starvation-upregulated protein" species:7227 "Drosophila melanogaster" [GO:0008150 "biological_process" evidence=ND] [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] EMBL:AE014134 InterPro:IPR012875 Pfam:PF07896 GeneTree:ENSGT00390000009155 UniGene:Dm.6977 GeneID:34089 KEGG:dme:Dmel_CG7224 FlyBase:FBgn0031971 ChiTaRS:CG7224 GenomeRNAi:34089 NextBio:786803 EMBL:BT056317 RefSeq:NP_609170.1 SMR:Q9VLU6 IntAct:Q9VLU6 MINT:MINT-319714 EnsemblMetazoa:FBtr0079532 UCSC:CG7224-RA InParanoid:Q9VLU6 OMA:LDEFSRH Uniprot:Q9VLU6)

HSP 1 Score: 67.3958 bits (163), Expect = 3.975e-14
Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 0 
Query:   36 PKGKKEKAIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            P GK ++  +   ++ E  K   +  NP TGEIGGP GPEPTR+GDWERKGRVSDF
Sbjct:   63 PLGKLDEFSRHPYQEKEPLKPWPNQTNPYTGEIGGPAGPEPTRYGDWERKGRVSDF 118
[Close]
BLAST of EMLSAG00000001712 vs. GO
Match: - (symbol:1110058L19Rik "RIKEN cDNA 1110058L19 gene" species:10090 "Mus musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576 "extracellular region" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0008150 "biological_process" evidence=ND] MGI:MGI:1915252 GO:GO:0005739 GO:GO:0005576 eggNOG:NOG77680 HOGENOM:HOG000164754 HOVERGEN:HBG059140 OMA:CVPATAW OrthoDB:EOG7TMZTQ TreeFam:TF106123 InterPro:IPR012875 Pfam:PF07896 EMBL:AK003789 EMBL:AK004301 EMBL:AK007909 EMBL:AK015824 EMBL:BC028981 RefSeq:NP_080779.2 UniGene:Mm.250424 ProteinModelPortal:Q8BTE0 SMR:Q8BTE0 PhosphoSite:Q8BTE0 PRIDE:Q8BTE0 Ensembl:ENSMUST00000027338 GeneID:68002 KEGG:mmu:68002 UCSC:uc007amj.2 GeneTree:ENSGT00390000009155 InParanoid:Q8BTE0 NextBio:326184 Bgee:Q8BTE0 CleanEx:MM_1110058L19RIK Genevestigator:Q8BTE0 Uniprot:Q8BTE0)

HSP 1 Score: 65.855 bits (159), Expect = 1.149e-13
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 0 
Query:   43 AIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            ++++  E+ E  +K  D VNPVT E GGPKGPEPTR+GDWERKGR  DF
Sbjct:   56 SLEDSPEEREPLQKFPDDVNPVTKEKGGPKGPEPTRYGDWERKGRCIDF 104
[Close]
BLAST of EMLSAG00000001712 vs. GO
Match: - (symbol:C6orf57 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739 OMA:CVPATAW OrthoDB:EOG7TMZTQ TreeFam:TF106123 InterPro:IPR012875 Pfam:PF07896 GeneTree:ENSGT00390000009155 RefSeq:XP_853554.1 Ensembl:ENSCAFT00000004096 GeneID:610894 KEGG:cfa:610894 CTD:610894 NextBio:20896440 Uniprot:E2QZC8)

HSP 1 Score: 65.4698 bits (158), Expect = 1.952e-13
Identity = 39/95 (41.05%), Postives = 50/95 (52.63%), Query Frame = 0 
Query:   14 VRATPLSFLESRYYCSGKSRDPPKGKKEKAIQEEI-------------EDAEIQK----KIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            V AT      S   C    +   +G+K K IQ+ +             ED+ ++K    K  D +NPVT E GGP+GPEPTR+GDWERKGR  DF
Sbjct:   13 VPATAWRAARSPLLCHSVRKMSSQGEKSKPIQQSLKKPKLPEGRFDAPEDSNLEKEPLTKFPDDINPVTKEKGGPRGPEPTRYGDWERKGRCIDF 107
[Close]
BLAST of EMLSAG00000001712 vs. GO
Match: - (symbol:C6orf57 "UPF0369 protein C6orf57" species:9606 "Homo sapiens" [GO:0005576 "extracellular region" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739 GO:GO:0005576 EMBL:CH471051 EMBL:AL583856 EMBL:BC104649 RefSeq:NP_660310.2 UniGene:Hs.418495 ProteinModelPortal:Q5VUM1 SMR:Q5VUM1 BioGrid:126423 STRING:9606.ENSP00000359505 PhosphoSite:Q5VUM1 DMDM:74747126 PaxDb:Q5VUM1 PRIDE:Q5VUM1 DNASU:135154 Ensembl:ENST00000370474 GeneID:135154 KEGG:hsa:135154 UCSC:uc003pfq.1 CTD:135154 GeneCards:GC06P071276 HGNC:HGNC:20957 HPA:HPA031824 neXtProt:NX_Q5VUM1 PharmGKB:PA134932684 eggNOG:NOG77680 HOGENOM:HOG000164754 HOVERGEN:HBG059140 InParanoid:Q5VUM1 OMA:CVPATAW OrthoDB:EOG7TMZTQ PhylomeDB:Q5VUM1 TreeFam:TF106123 GenomeRNAi:135154 NextBio:83465 Bgee:Q5VUM1 CleanEx:HS_C6orf57 Genevestigator:Q5VUM1 InterPro:IPR012875 Pfam:PF07896 Uniprot:Q5VUM1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.287e-12
Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = 0 
Query:   49 EDAEIQK----KIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            ED+ ++K    K  D VNPVT E GGP+GPEPTR+GDWERKGR  DF
Sbjct:   62 EDSHLEKEPLEKFPDDVNPVTKEKGGPRGPEPTRYGDWERKGRCIDF 108
[Close]
BLAST of EMLSAG00000001712 vs. GO
Match: - (symbol:LOC685888 "Protein 1110058L19Rik" species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion" evidence=IEA] RGD:1588998 GO:GO:0005739 OMA:CVPATAW OrthoDB:EOG7TMZTQ InterPro:IPR012875 Pfam:PF07896 GeneTree:ENSGT00390000009155 EMBL:CH473987 EMBL:AABR06059337 RefSeq:XP_003750717.1 RefSeq:XP_003754546.1 Ensembl:ENSRNOT00000035033 GeneID:685888 KEGG:rno:685888 NextBio:35573197 Uniprot:D4A7Q3)

HSP 1 Score: 62.7734 bits (151), Expect = 1.607e-12
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   43 AIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            ++ +  E+ +  +K  D VNPVT E GGP+GPEPTR+GDWERKGR  DF
Sbjct:   56 SLDDSPEERDPLQKFPDDVNPVTKEKGGPRGPEPTRYGDWERKGRCIDF 104
[Close]
BLAST of EMLSAG00000001712 vs. GO
Match: - (symbol:LOC685888 "hypothetical protein LOC685888" species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion" evidence=IEA;ISO] RGD:1588998 GO:GO:0005739 OMA:CVPATAW OrthoDB:EOG7TMZTQ InterPro:IPR012875 Pfam:PF07896 GeneTree:ENSGT00390000009155 EMBL:CH473987 EMBL:AABR06059337 RefSeq:XP_003750717.1 RefSeq:XP_003754546.1 Ensembl:ENSRNOT00000035033 GeneID:685888 KEGG:rno:685888 NextBio:35573197 Uniprot:D4A7Q3)

HSP 1 Score: 62.7734 bits (151), Expect = 1.607e-12
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:   43 AIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            ++ +  E+ +  +K  D VNPVT E GGP+GPEPTR+GDWERKGR  DF
Sbjct:   56 SLDDSPEERDPLQKFPDDVNPVTKEKGGPRGPEPTRYGDWERKGRCIDF 104
[Close]
BLAST of EMLSAG00000001712 vs. GO
Match: - (symbol:C6orf57 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739 OMA:CVPATAW OrthoDB:EOG7TMZTQ TreeFam:TF106123 InterPro:IPR012875 Pfam:PF07896 GeneTree:ENSGT00390000009155 EMBL:FP325351 Ensembl:ENSSSCT00000031543 Uniprot:I3LJQ3)

HSP 1 Score: 62.3882 bits (150), Expect = 2.627e-12
Identity = 29/47 (61.70%), Postives = 35/47 (74.47%), Query Frame = 0 
Query:   49 EDAEIQK----KIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            ED+ ++K    K  D VNP+T E GGP+GPEPTR+GDWERKGR  DF
Sbjct:   61 EDSNLEKEPLTKFPDDVNPITKEKGGPRGPEPTRYGDWERKGRCIDF 107
[Close]
BLAST of EMLSAG00000001712 vs. GO
Match: - (symbol:CG15283 species:7227 "Drosophila melanogaster" [GO:0090175 "regulation of establishment of planar polarity" evidence=IMP] EMBL:AE014134 OrthoDB:EOG7TMZTQ InterPro:IPR012875 Pfam:PF07896 GeneTree:ENSGT00390000009155 GO:GO:0090175 EMBL:BT023534 RefSeq:NP_652574.3 UniGene:Dm.27515 SMR:Q9VJS6 IntAct:Q9VJS6 MINT:MINT-819010 STRING:7227.FBpp0080205 EnsemblMetazoa:FBtr0300837 GeneID:50454 KEGG:dme:Dmel_CG15283 UCSC:CG15283-RA FlyBase:FBgn0028844 GenomeRNAi:50454 NextBio:841033 Uniprot:Q9VJS6)

HSP 1 Score: 60.8474 bits (146), Expect = 1.410e-11
Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 0 
Query:   50 DAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            + E  K   +  NP TGEIGG  GPEPTR+GDWERKGRV+DF
Sbjct:   85 EKEPLKPWPNNTNPYTGEIGGQAGPEPTRYGDWERKGRVTDF 126
[Close]
BLAST of EMLSAG00000001712 vs. GO
Match: - (symbol:AT5G67490 "AT5G67490" species:3702 "Arabidopsis thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150 "biological_process" evidence=ND] EMBL:CP002688 InterPro:IPR012875 Pfam:PF07896 EMBL:AY086451 EMBL:BT020292 EMBL:BT020316 EMBL:BT028951 RefSeq:NP_569049.1 UniGene:At.28809 STRING:3702.AT5G67490.1-P EnsemblPlants:AT5G67490.1 GeneID:836885 KEGG:ath:AT5G67490 TAIR:At5g67490 InParanoid:Q8LCR1 OMA:WEQRGRC ProtClustDB:CLSN2917802 Genevestigator:Q8LCR1 Uniprot:Q8LCR1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.534e-10
Identity = 24/31 (77.42%), Postives = 28/31 (90.32%), Query Frame = 0 
Query:   61 VNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            VN  TGEIGGP+GPEPTR+GDWE++GR SDF
Sbjct:   78 VNEDTGEIGGPRGPEPTRYGDWEQRGRCSDF 108
[Close]
BLAST of EMLSAG00000001712 vs. GO
Match: - (symbol:SPO_3377 "conserved hypothetical protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] EMBL:CP000031 HOGENOM:HOG000164754 InterPro:IPR012875 Pfam:PF07896 RefSeq:YP_168573.1 STRING:246200.SPO3377 EnsemblBacteria:AAV96604 GeneID:3195362 KEGG:sil:SPO3377 PATRIC:23380207 OMA:RDMTEET OrthoDB:EOG66MQX5 Uniprot:Q5LN35)

HSP 1 Score: 43.1282 bits (100), Expect = 1.232e-5
Identity = 21/50 (42.00%), Postives = 32/50 (64.00%), Query Frame = 0 
Query:   43 AIQEEIEDAEIQKKIQDA-VNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            A Q  + +AE +++  +A   P+  E+GG  GP+P R+GDWE+KG   DF
Sbjct:   11 AAQRALAEAEERRRKAEAETKPLPKELGGRDGPDPARYGDWEKKGIAIDF 60
[Close]
BLAST of EMLSAG00000001712 vs. C. finmarchicus
Match: gi|592821372|gb|GAXK01133196.1| (TSA: Calanus finmarchicus comp27538_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 64.6994 bits (156), Expect = 2.269e-13
Identity = 27/31 (87.10%), Postives = 30/31 (96.77%), Query Frame = 0 
Query:   61 VNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            VNP TGE+GGPKGPEPTR+GDWERKGRV+DF
Sbjct:   97 VNPKTGEVGGPKGPEPTRYGDWERKGRVTDF 189
[Close]
BLAST of EMLSAG00000001712 vs. C. finmarchicus
Match: gi|592821373|gb|GAXK01133195.1| (TSA: Calanus finmarchicus comp27538_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 64.6994 bits (156), Expect = 2.269e-13
Identity = 27/31 (87.10%), Postives = 30/31 (96.77%), Query Frame = 0 
Query:   61 VNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            VNP TGE+GGPKGPEPTR+GDWERKGRV+DF
Sbjct:  314 VNPKTGEVGGPKGPEPTRYGDWERKGRVTDF 406
[Close]
BLAST of EMLSAG00000001712 vs. L. salmonis peptides
Match: EMLSAP00000001712 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1296:59402:59677:-1 gene:EMLSAG00000001712 transcript:EMLSAT00000001712 description:"augustus_masked-LSalAtl2s1296-processed-gene-0.5")

HSP 1 Score: 187.963 bits (476), Expect = 6.398e-63
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 
Query:    1 MALFLQKSFHLVRVRATPLSFLESRYYCSGKSRDPPKGKKEKAIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            MALFLQKSFHLVRVRATPLSFLESRYYCSGKSRDPPKGKKEKAIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF
Sbjct:    1 MALFLQKSFHLVRVRATPLSFLESRYYCSGKSRDPPKGKKEKAIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
[Close]
BLAST of EMLSAG00000001712 vs. SwissProt
Match: gi|74869802|sp|Q9VLU6.2|SDHF4_DROME (RecName: Full=Succinate dehydrogenase assembly factor 4, mitochondrial; Short=SDH assembly factor 4; Short=SDHAF4; AltName: Full=Starvation-upregulated protein; Flags: Precursor)

HSP 1 Score: 67.3958 bits (163), Expect = 5.652e-15
Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 0 
Query:   36 PKGKKEKAIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            P GK ++  +   ++ E  K   +  NP TGEIGGP GPEPTR+GDWERKGRVSDF
Sbjct:   63 PLGKLDEFSRHPYQEKEPLKPWPNQTNPYTGEIGGPAGPEPTRYGDWERKGRVSDF 118
[Close]
BLAST of EMLSAG00000001712 vs. SwissProt
Match: gi|109820099|sp|Q8BTE0.2|SDHF4_MOUSE (RecName: Full=Succinate dehydrogenase assembly factor 4, mitochondrial; Short=SDH assembly factor 4; Short=SDHAF4; Flags: Precursor)

HSP 1 Score: 65.855 bits (159), Expect = 1.581e-14
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 0 
Query:   43 AIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            ++++  E+ E  +K  D VNPVT E GGPKGPEPTR+GDWERKGR  DF
Sbjct:   56 SLEDSPEEREPLQKFPDDVNPVTKEKGGPKGPEPTRYGDWERKGRCIDF 104
[Close]
BLAST of EMLSAG00000001712 vs. SwissProt
Match: gi|74856601|sp|Q54Y25.1|SDHF4_DICDI (RecName: Full=Succinate dehydrogenase assembly factor 4, mitochondrial; Short=SDH assembly factor 4; Short=SDHAF4)

HSP 1 Score: 64.6994 bits (156), Expect = 4.533e-14
Identity = 26/31 (83.87%), Postives = 28/31 (90.32%), Query Frame = 0 
Query:   61 VNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            VNP+T EIGGPKGPEPTR+ DWER GRVSDF
Sbjct:   78 VNPITKEIGGPKGPEPTRYNDWERNGRVSDF 108
[Close]
BLAST of EMLSAG00000001712 vs. SwissProt
Match: gi|74747126|sp|Q5VUM1.1|SDHF4_HUMAN (RecName: Full=Succinate dehydrogenase assembly factor 4, mitochondrial; Short=SDH assembly factor 4; Short=SDHAF4; Flags: Precursor)

HSP 1 Score: 63.1586 bits (152), Expect = 2.049e-13
Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = 0 
Query:   49 EDAEIQK----KIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            ED+ ++K    K  D VNPVT E GGP+GPEPTR+GDWERKGR  DF
Sbjct:   62 EDSHLEKEPLEKFPDDVNPVTKEKGGPRGPEPTRYGDWERKGRCIDF 108
[Close]
BLAST of EMLSAG00000001712 vs. SwissProt
Match: gi|6226336|sp|Q9ZDZ6.1|Y167_RICPR (RecName: Full=UPF0369 protein RP167)

HSP 1 Score: 47.7506 bits (112), Expect = 1.335e-7
Identity = 18/25 (72.00%), Postives = 22/25 (88.00%), Query Frame = 0 
Query:   67 EIGGPKGPEPTRFGDWERKGRVSDF 91
            EIGG KG EPTR+GDW+ KG+V+DF
Sbjct:   54 EIGGIKGLEPTRYGDWQHKGKVTDF 78
[Close]
BLAST of EMLSAG00000001712 vs. SwissProt
Match: gi|81528504|sp|Q92J60.1|Y209_RICCN (RecName: Full=UPF0369 protein RC0209)

HSP 1 Score: 46.595 bits (109), Expect = 4.434e-7
Identity = 22/42 (52.38%), Postives = 28/42 (66.67%), Query Frame = 0 
Query:   51 AEIQKKIQDAVN-PVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
             +I   I +  N P   EIGG KG EPTR+GDW+ KG+V+DF
Sbjct:   52 VKISNNISEKENLPKEKEIGGVKGLEPTRYGDWQHKGKVTDF 93
[Close]
BLAST of EMLSAG00000001712 vs. SwissProt
Match: gi|75536089|sp|Q4UKG8.1|Y1112_RICFE (RecName: Full=UPF0369 protein RF_1112)

HSP 1 Score: 45.8246 bits (107), Expect = 6.137e-7
Identity = 17/24 (70.83%), Postives = 21/24 (87.50%), Query Frame = 0 
Query:   68 IGGPKGPEPTRFGDWERKGRVSDF 91
            IGG KG EPTR+GDW+ KG+V+DF
Sbjct:   55 IGGVKGLEPTRYGDWQHKGKVTDF 78
[Close]
BLAST of EMLSAG00000001712 vs. Select Arthropod Genomes
Match: gb|KFM77498.1| (hypothetical protein X975_14777, partial [Stegodyphus mimosarum])

HSP 1 Score: 70.0922 bits (170), Expect = 1.871e-16
Identity = 38/75 (50.67%), Postives = 48/75 (64.00%), Query Frame = 0 
Query:   20 SFLESRYYCSGKSRDPPKGKKEKAIQEEIEDAEI---QKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            +F +S+    GK+   P GK ++   EE  D E         D  NP+TGE+GGP+GPEPTR+GDWERKGRVSDF
Sbjct:   32 TFADSKEKKRGKT---PLGKLDQTQAEETADKEKPDPYAPFPDNRNPITGEVGGPRGPEPTRYGDWERKGRVSDF 103
[Close]
BLAST of EMLSAG00000001712 vs. Select Arthropod Genomes
Match: gb|EFA03826.1| (UPF0369 protein C6orf57-like Protein [Tribolium castaneum])

HSP 1 Score: 68.1662 bits (165), Expect = 1.101e-15
Identity = 42/108 (38.89%), Postives = 55/108 (50.93%), Query Frame = 0 
Query:    1 MALFLQKSFHLVRVRATPLSFLESRYYCSGKSRDPP--------KGKKEKAIQEEIEDAEIQKKIQ---------DAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            M L L    HL  +R T   F+  R   + K   PP        K  +E    E++++   +   Q         D  NP TGE+GGP+GPEPTR+GDWERKGRV+DF
Sbjct:    1 MTLRLSGLCHLNPLRQTCAVFM--RLSSTSKQEKPPSRRLQEFRKKLRETTPLEKLDEISGKHPHQEKEPLEAWPDNTNPTTGEVGGPRGPEPTRYGDWERKGRVTDF 106
[Close]
BLAST of EMLSAG00000001712 vs. Select Arthropod Genomes
Match: AHN54248.1 (Starvation-upregulated protein, isoform C [Drosophila melanogaster])

HSP 1 Score: 67.3958 bits (163), Expect = 2.739e-15
Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 0 
Query:   36 PKGKKEKAIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            P GK ++  +   ++ E  K   +  NP TGEIGGP GPEPTR+GDWERKGRVSDF
Sbjct:   63 PLGKLDEFSRHPYQEKEPLKPWPNQTNPYTGEIGGPAGPEPTRYGDWERKGRVSDF 118
[Close]
BLAST of EMLSAG00000001712 vs. Select Arthropod Genomes
Match: AAF52586.2 (Starvation-upregulated protein, isoform A [Drosophila melanogaster])

HSP 1 Score: 67.3958 bits (163), Expect = 2.739e-15
Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 0 
Query:   36 PKGKKEKAIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            P GK ++  +   ++ E  K   +  NP TGEIGGP GPEPTR+GDWERKGRVSDF
Sbjct:   63 PLGKLDEFSRHPYQEKEPLKPWPNQTNPYTGEIGGPAGPEPTRYGDWERKGRVSDF 118
[Close]
BLAST of EMLSAG00000001712 vs. Select Arthropod Genomes
Match: XP_016772963.1 (PREDICTED: succinate dehydrogenase assembly factor 4, mitochondrial-like isoform X2 [Apis mellifera])

HSP 1 Score: 64.3142 bits (155), Expect = 1.322e-14
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:   49 EDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            ++ E  K   +  NP TGEIGGP+GPEPTR+GDWERKGRV+DF
Sbjct:   28 QEKEPLKPFPNNTNPKTGEIGGPRGPEPTRYGDWERKGRVTDF 70
[Close]
BLAST of EMLSAG00000001712 vs. Select Arthropod Genomes
Match: XP_006572307.1 (PREDICTED: succinate dehydrogenase assembly factor 4, mitochondrial-like isoform X1 [Apis mellifera])

HSP 1 Score: 65.4698 bits (158), Expect = 1.486e-14
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:   49 EDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            ++ E  K   +  NP TGEIGGP+GPEPTR+GDWERKGRV+DF
Sbjct:   76 QEKEPLKPFPNNTNPKTGEIGGPRGPEPTRYGDWERKGRVTDF 118
[Close]
BLAST of EMLSAG00000001712 vs. Select Arthropod Genomes
Match: EAA12431.5 (AGAP008422-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 64.6994 bits (156), Expect = 3.234e-14
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0 
Query:   59 DAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            +  NP TGEIGGPKGPEPTR+GDWERKGRV+DF
Sbjct:   79 NNTNPNTGEIGGPKGPEPTRYGDWERKGRVTDF 111
[Close]
BLAST of EMLSAG00000001712 vs. Select Arthropod Genomes
Match: EEB13505.1 (conserved hypothetical protein [Pediculus humanus corporis])

HSP 1 Score: 62.003 bits (149), Expect = 2.741e-13
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:   49 EDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            ++ E  K   + +NPVTGE  GPKG EPTR+GDWERKGRVSDF
Sbjct:   64 QEKEPLKPFPNGINPVTGERNGPKGVEPTRYGDWERKGRVSDF 106
[Close]
BLAST of EMLSAG00000001712 vs. Select Arthropod Genomes
Match: AAF53398.3 (uncharacterized protein Dmel_CG15283 [Drosophila melanogaster])

HSP 1 Score: 60.8474 bits (146), Expect = 1.450e-12
Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 0 
Query:   50 DAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            + E  K   +  NP TGEIGG  GPEPTR+GDWERKGRV+DF
Sbjct:   85 EKEPLKPWPNNTNPYTGEIGGQAGPEPTRYGDWERKGRVTDF 126
[Close]
BLAST of EMLSAG00000001712 vs. Select Arthropod Genomes
Match: gb|KPM02737.1| (hypothetical protein QR98_0011560 [Sarcoptes scabiei])

HSP 1 Score: 58.151 bits (139), Expect = 1.573e-11
Identity = 25/30 (83.33%), Postives = 25/30 (83.33%), Query Frame = 0 
Query:   62 NPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            NP TGE  GP GPEPTRFGDWERKGR SDF
Sbjct:  111 NPETGEKNGPTGPEPTRFGDWERKGRCSDF 140
[Close]
BLAST of EMLSAG00000001712 vs. nr
Match: gi|25151100|ref|NP_740875.1| (Uncharacterized protein CELE_W02D3.12 [Caenorhabditis elegans] >gi|351061234|emb|CCD68997.1| Uncharacterized protein CELE_W02D3.12 [Caenorhabditis elegans])

HSP 1 Score: 70.8626 bits (172), Expect = 2.534e-14
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 0 
Query:   36 PKGKKEKAIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            PKG  +KA +++ ED  + KK    VN  TGE+GGP GPEPTR+GDWERKGRVSDF
Sbjct:   35 PKGALDKADEQQYEDPHL-KKHPGGVNKSTGEVGGPAGPEPTRYGDWERKGRVSDF 89
[Close]
BLAST of EMLSAG00000001712 vs. nr
Match: gi|676430586|ref|XP_009045975.1| (hypothetical protein LOTGIDRAFT_99667, partial [Lottia gigantea] >gi|556114650|gb|ESP03302.1| hypothetical protein LOTGIDRAFT_99667, partial [Lottia gigantea])

HSP 1 Score: 70.0922 bits (170), Expect = 3.022e-14
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 0 
Query:   47 EIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            ++E+ E  +K  D  NPVTGEIGGP+GPEPTR+GDWERKGRV+DF
Sbjct:   19 QVEETEPLEKFPDDKNPVTGEIGGPRGPEPTRYGDWERKGRVTDF 63
[Close]
BLAST of EMLSAG00000001712 vs. nr
Match: gi|751451119|ref|XP_011179873.1| (PREDICTED: succinate dehydrogenase assembly factor 4, mitochondrial-like [Bactrocera cucurbitae])

HSP 1 Score: 70.4774 bits (171), Expect = 8.676e-14
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 0 
Query:   36 PKGKKEKAIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            P GK ++  Q   ++ E  K   +A NP TGEIGGP GPEPTR+GDWERKGRV+DF
Sbjct:   66 PIGKLDEFSQHPFQEKEPLKPWPNATNPHTGEIGGPAGPEPTRYGDWERKGRVTDF 121
[Close]
BLAST of EMLSAG00000001712 vs. nr
Match: gi|675384601|gb|KFM77498.1| (hypothetical protein X975_14777, partial [Stegodyphus mimosarum])

HSP 1 Score: 70.0922 bits (170), Expect = 9.156e-14
Identity = 38/75 (50.67%), Postives = 48/75 (64.00%), Query Frame = 0 
Query:   20 SFLESRYYCSGKSRDPPKGKKEKAIQEEIEDAEI---QKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            +F +S+    GK+   P GK ++   EE  D E         D  NP+TGE+GGP+GPEPTR+GDWERKGRVSDF
Sbjct:   32 TFADSKEKKRGKT---PLGKLDQTQAEETADKEKPDPYAPFPDNRNPITGEVGGPRGPEPTRYGDWERKGRVSDF 103
[Close]
BLAST of EMLSAG00000001712 vs. nr
Match: gi|751791162|ref|XP_011205166.1| (PREDICTED: succinate dehydrogenase assembly factor 4, mitochondrial-like [Bactrocera dorsalis])

HSP 1 Score: 70.4774 bits (171), Expect = 1.021e-13
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 0 
Query:   36 PKGKKEKAIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            P GK ++  Q   ++ E  K   +A NP TGEIGGP GPEPTR+GDWERKGRV+DF
Sbjct:   66 PIGKLDEFSQHPFQEKEPLKPWPNATNPHTGEIGGPAGPEPTRYGDWERKGRVTDF 121
[Close]
BLAST of EMLSAG00000001712 vs. nr
Match: gi|1098620232|ref|XP_018801707.1| (PREDICTED: succinate dehydrogenase assembly factor 4, mitochondrial-like [Bactrocera latifrons])

HSP 1 Score: 70.0922 bits (170), Expect = 1.201e-13
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 0 
Query:   36 PKGKKEKAIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            P GK ++  Q   ++ E  K   +A NP TGEIGGP GPEPTR+GDWERKGRV+DF
Sbjct:   66 PIGKLDEFSQHPFQEKEPLKPWPNATNPHTGEIGGPAGPEPTRYGDWERKGRVTDF 121
[Close]
BLAST of EMLSAG00000001712 vs. nr
Match: gi|510863995|gb|EPB79294.1| (hypothetical protein ANCCEY_01587 [Ancylostoma ceylanicum])

HSP 1 Score: 70.8626 bits (172), Expect = 1.683e-13
Identity = 47/101 (46.53%), Postives = 58/101 (57.43%), Query Frame = 0 
Query:    6 QKSFHLVRV------RATPLSFLESRYYCSGKSRDPPKGK----KEKAIQEEIEDAE-----IQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            Q +F ++RV      RAT L  L +      K + P K K    KEK    +++D +       KK    VNPVTGEIGGP GPEPTR+GDWERKGRV+DF
Sbjct:   74 QYTFRMLRVVNRIAPRATSLRALSTE-----KPKVPKKSKEEIMKEKTPAGKLDDLKPYEDPYLKKHPGGVNPVTGEIGGPAGPEPTRYGDWERKGRVTDF 169
[Close]
BLAST of EMLSAG00000001712 vs. nr
Match: gi|1022763071|gb|KZS08731.1| (Succinate dehydrogenase assembly factor 4, mitochondrial [Daphnia magna])

HSP 1 Score: 68.9366 bits (167), Expect = 1.873e-13
Identity = 36/71 (50.70%), Postives = 45/71 (63.38%), Query Frame = 0 
Query:   28 CSGKSRDPPKGKKEKAIQEEIEDA-------EIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            C+ K++ P + K      +EIE+        E  K   +  NP TGE+GGPKGPEPTR+GDWERKGRVSDF
Sbjct:   26 CASKAKKPRRVKTPIGKLDEIEEGQHPYQEKEPLKPWPNNTNPTTGEVGGPKGPEPTRYGDWERKGRVSDF 96
[Close]
BLAST of EMLSAG00000001712 vs. nr
Match: gi|498935064|ref|XP_004520045.1| (PREDICTED: succinate dehydrogenase assembly factor 4, mitochondrial-like [Ceratitis capitata])

HSP 1 Score: 69.707 bits (169), Expect = 1.895e-13
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 0 
Query:   36 PKGKKEKAIQEEIEDAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            P GK ++  Q   ++ E  K   +A NP TGEIGGP GPEPTR+GDWERKGRV+DF
Sbjct:   66 PIGKLDEFSQHPFQEKEPLKPWPNATNPHTGEIGGPAGPEPTRYGDWERKGRVTDF 121
[Close]
BLAST of EMLSAG00000001712 vs. nr
Match: gi|857973260|emb|CEP00541.1| (hypothetical protein PBRA_001594 [Plasmodiophora brassicae])

HSP 1 Score: 69.3218 bits (168), Expect = 2.171e-13
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0 
Query:   50 DAEIQKKIQDAVNPVTGEIGGPKGPEPTRFGDWERKGRVSDF 91
            D E++  + D  NP+TGEIGGP+GPEPTR+GDWER GR SDF
Sbjct:   78 DTELEDDMVDLRNPITGEIGGPRGPEPTRYGDWERNGRCSDF 119
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001712 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 21
Match NameE-valueIdentityDescription
-3.975e-1457.14symbol:Sirup "Starvation-upregulated protein" spec... [more]
-1.149e-1361.22symbol:1110058L19Rik "RIKEN cDNA 1110058L19 gene" ... [more]
-1.952e-1341.05symbol:C6orf57 "Uncharacterized protein" species:9... [more]
-1.287e-1263.83symbol:C6orf57 "UPF0369 protein C6orf57" species:9... [more]
-1.607e-1257.14symbol:LOC685888 "Protein 1110058L19Rik" species:1... [more]
-1.607e-1257.14symbol:LOC685888 "hypothetical protein LOC685888" ... [more]
-2.627e-1261.70symbol:C6orf57 "Uncharacterized protein" species:9... [more]
-1.410e-1164.29symbol:CG15283 species:7227 "Drosophila melanogast... [more]
-1.534e-1077.42symbol:AT5G67490 "AT5G67490" species:3702 "Arabido... [more]
-1.232e-542.00symbol:SPO_3377 "conserved hypothetical protein" s... [more]

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BLAST of EMLSAG00000001712 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 2
Match NameE-valueIdentityDescription
gi|592821372|gb|GAXK01133196.1|2.269e-1387.10TSA: Calanus finmarchicus comp27538_c1_seq1 transc... [more]
gi|592821373|gb|GAXK01133195.1|2.269e-1387.10TSA: Calanus finmarchicus comp27538_c0_seq1 transc... [more]
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BLAST of EMLSAG00000001712 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000017126.398e-63100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1296:5940... [more]
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BLAST of EMLSAG00000001712 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
gi|74869802|sp|Q9VLU6.2|SDHF4_DROME5.652e-1557.14RecName: Full=Succinate dehydrogenase assembly fac... [more]
gi|109820099|sp|Q8BTE0.2|SDHF4_MOUSE1.581e-1461.22RecName: Full=Succinate dehydrogenase assembly fac... [more]
gi|74856601|sp|Q54Y25.1|SDHF4_DICDI4.533e-1483.87RecName: Full=Succinate dehydrogenase assembly fac... [more]
gi|74747126|sp|Q5VUM1.1|SDHF4_HUMAN2.049e-1363.83RecName: Full=Succinate dehydrogenase assembly fac... [more]
gi|6226336|sp|Q9ZDZ6.1|Y167_RICPR1.335e-772.00RecName: Full=UPF0369 protein RP167[more]
gi|81528504|sp|Q92J60.1|Y209_RICCN4.434e-752.38RecName: Full=UPF0369 protein RC0209[more]
gi|75536089|sp|Q4UKG8.1|Y1112_RICFE6.137e-770.83RecName: Full=UPF0369 protein RF_1112[more]
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BLAST of EMLSAG00000001712 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 10
Match NameE-valueIdentityDescription
gb|KFM77498.1|1.871e-1650.67hypothetical protein X975_14777, partial [Stegodyp... [more]
gb|EFA03826.1|1.101e-1538.89UPF0369 protein C6orf57-like Protein [Tribolium ca... [more]
AHN54248.12.739e-1557.14Starvation-upregulated protein, isoform C [Drosoph... [more]
AAF52586.22.739e-1557.14Starvation-upregulated protein, isoform A [Drosoph... [more]
XP_016772963.11.322e-1465.12PREDICTED: succinate dehydrogenase assembly factor... [more]
XP_006572307.11.486e-1465.12PREDICTED: succinate dehydrogenase assembly factor... [more]
EAA12431.53.234e-1481.82AGAP008422-PA [Anopheles gambiae str. PEST][more]
EEB13505.12.741e-1365.12conserved hypothetical protein [Pediculus humanus ... [more]
AAF53398.31.450e-1264.29uncharacterized protein Dmel_CG15283 [Drosophila m... [more]
gb|KPM02737.1|1.573e-1183.33hypothetical protein QR98_0011560 [Sarcoptes scabi... [more]
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BLAST of EMLSAG00000001712 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|25151100|ref|NP_740875.1|2.534e-1462.50Uncharacterized protein CELE_W02D3.12 [Caenorhabdi... [more]
gi|676430586|ref|XP_009045975.1|3.022e-1468.89hypothetical protein LOTGIDRAFT_99667, partial [Lo... [more]
gi|751451119|ref|XP_011179873.1|8.676e-1458.93PREDICTED: succinate dehydrogenase assembly factor... [more]
gi|675384601|gb|KFM77498.1|9.156e-1450.67hypothetical protein X975_14777, partial [Stegodyp... [more]
gi|751791162|ref|XP_011205166.1|1.021e-1358.93PREDICTED: succinate dehydrogenase assembly factor... [more]
gi|1098620232|ref|XP_018801707.1|1.201e-1358.93PREDICTED: succinate dehydrogenase assembly factor... [more]
gi|510863995|gb|EPB79294.1|1.683e-1346.53hypothetical protein ANCCEY_01587 [Ancylostoma cey... [more]
gi|1022763071|gb|KZS08731.1|1.873e-1350.70Succinate dehydrogenase assembly factor 4, mitocho... [more]
gi|498935064|ref|XP_004520045.1|1.895e-1358.93PREDICTED: succinate dehydrogenase assembly factor... [more]
gi|857973260|emb|CEP00541.1|2.171e-1366.67hypothetical protein PBRA_001594 [Plasmodiophora b... [more]

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BLAST of EMLSAG00000001712 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1296supercontigLSalAtl2s1296:59402..59677 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s1296-processed-gene-0.5
Biotypeprotein_coding
EvidenceIEA
NoteSuccinate dehydrogenase assembly factor 4, mitochondrial
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001712 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001712EMLSAT00000001712-697559Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1296:59402..59677-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001712-684478 ID=EMLSAG00000001712-684478|Name=EMLSAG00000001712|organism=Lepeophtheirus salmonis|type=gene|length=276bp|location=Sequence derived from alignment at LSalAtl2s1296:59402..59677- (Lepeophtheirus salmonis)
ATGGCTCTTTTTCTCCAAAAGTCATTCCACCTAGTAAGAGTCAGAGCCAC
TCCTCTCTCTTTTCTAGAGTCAAGATATTATTGCAGTGGTAAGTCGCGTG
ATCCTCCAAAGGGGAAGAAAGAAAAGGCCATTCAAGAAGAAATTGAAGAT
GCAGAAATTCAAAAAAAGATTCAGGATGCTGTGAATCCTGTTACTGGAGA
AATTGGTGGACCAAAAGGACCTGAGCCTACTCGTTTTGGAGATTGGGAAA
GAAAAGGACGCGTCTCAGATTTTTAG
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