EMLSAG00000001930, EMLSAG00000001930-684696 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000001930
Unique Name	EMLSAG00000001930-684696
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000001930 vs. GO
Match: - (symbol:cdc42se2-A "CDC42 small effector protein 2-A" species:8364 "Xenopus (Silurana) tropicalis" [GO:0005198 "structural molecule activity" evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS] [GO:0009966 "regulation of signal transduction" evidence=ISS] GO:GO:0005886 GO:GO:0005737 GO:GO:0005856 GO:GO:0005198 GO:GO:0008360 GO:GO:0009966 InterPro:IPR000095 Pfam:PF00786 PROSITE:PS50108 eggNOG:NOG78697 GeneTree:ENSGT00390000010375 OMA:HHQRLRI OrthoDB:EOG74N5KD Gene3D:3.90.810.10 HOVERGEN:HBG107546 TreeFam:TF323815 HOGENOM:HOG000006512 CTD:56990 EMBL:CR762307 EMBL:BC123961 RefSeq:NP_001025494.1 UniGene:Str.10514 ProteinModelPortal:Q28EW5 STRING:8364.ENSXETP00000055897 Ensembl:ENSXETT00000055897 GeneID:594909 KEGG:xtr:594909 Xenbase:XB-GENE-5957486 Uniprot:Q28EW5)

HSP 1 Score: 47.3654 bits (111), Expect = 3.704e-7
Identity = 23/54 (42.59%), Postives = 32/54 (59.26%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRV 54
            MIG PT+F HTAH+G+ DL S        S   + +QM SKGGYG +    +++
Sbjct:   28 MIGEPTNFVHTAHVGSGDLFSGMN-----SVSSIQNQMQSKGGYGGNMSANVQM 76

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BLAST of EMLSAG00000001930 vs. GO
Match: - (symbol:CDC42SE2 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0005198 "structural molecule activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0009966 "regulation of signal transduction" evidence=IEA] GO:GO:0005886 GO:GO:0005634 GO:GO:0005198 GO:GO:0009966 InterPro:IPR000095 Pfam:PF00786 PROSITE:PS50108 GeneTree:ENSGT00390000010375 Gene3D:3.90.810.10 TreeFam:TF323815 CTD:56990 EMBL:AAEX03007772 RefSeq:XP_005626550.1 RefSeq:XP_005626551.1 RefSeq:XP_005626552.1 RefSeq:XP_851844.1 ProteinModelPortal:J9NY21 Ensembl:ENSCAFT00000043373 GeneID:609492 KEGG:cfa:609492 Uniprot:J9NY21)

HSP 1 Score: 46.9802 bits (110), Expect = 4.942e-7
Identity = 23/54 (42.59%), Postives = 31/54 (57.41%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRV 54
            MIG PT+F HTAH+G+ DL S        S   + +QM SKGGYG      +++
Sbjct:   28 MIGEPTNFVHTAHVGSGDLFSGMN-----SVSSIQNQMQSKGGYGGGMSASVQM 76

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BLAST of EMLSAG00000001930 vs. GO
Match: - (symbol:Gga.2962 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0005198 "structural molecule activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0009966 "regulation of signal transduction" evidence=IEA] InterPro:IPR000095 Pfam:PF00786 PROSITE:PS50108 GeneTree:ENSGT00390000010375 Gene3D:3.90.810.10 EMBL:AC186549 EMBL:AC197813 Ensembl:ENSGALT00000043868 Uniprot:R4GLC1)

HSP 1 Score: 46.9802 bits (110), Expect = 6.076e-7
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYG 45
            MIG PT+F HTAH+G+ DL S        S   + +QM SKGGYG
Sbjct:   59 MIGEPTNFVHTAHVGSGDLFSGMN-----SVSSIQNQMQSKGGYG 98

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BLAST of EMLSAG00000001930 vs. GO
Match: - (symbol:CDC42SE2 "CDC42 small effector protein 2" species:9913 "Bos taurus" [GO:0001891 "phagocytic cup" evidence=IEA] [GO:0005198 "structural molecule activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006909 "phagocytosis" evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA] [GO:0009966 "regulation of signal transduction" evidence=IEA] [GO:0042995 "cell projection" evidence=IEA] GO:GO:0005634 GO:GO:0005737 GO:GO:0006909 GO:GO:0005856 GO:GO:0005198 GO:GO:0008360 GO:GO:0042995 GO:GO:0001891 GO:GO:0009966 InterPro:IPR000095 Pfam:PF00786 PROSITE:PS50108 eggNOG:NOG78697 GeneTree:ENSGT00390000010375 OrthoDB:EOG74N5KD Gene3D:3.90.810.10 HOVERGEN:HBG107546 TreeFam:TF323815 EMBL:BC147986 RefSeq:NP_001096007.1 RefSeq:XP_005209115.1 RefSeq:XP_005209116.1 RefSeq:XP_005209117.1 RefSeq:XP_005209118.1 RefSeq:XP_005209119.1 UniGene:Bt.7917 ProteinModelPortal:A6QLJ4 STRING:9913.ENSBTAP00000047577 Ensembl:ENSBTAT00000052263 GeneID:789618 KEGG:bta:789618 CTD:56990 InParanoid:A6QLJ4 OMA:ISANVQM NextBio:20929794 Uniprot:A6QLJ4)

HSP 1 Score: 46.595 bits (109), Expect = 6.149e-7
Identity = 23/54 (42.59%), Postives = 31/54 (57.41%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRV 54
            MIG PT+F HTAH+G+ DL S        S   + +QM SKGGYG      +++
Sbjct:   28 MIGEPTNFVHTAHVGSGDLFSGMN-----SVSSIQNQMQSKGGYGGGMAANVQM 76

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BLAST of EMLSAG00000001930 vs. GO
Match: - (symbol:CDC42SE2 "CDC42 small effector protein 2" species:9601 "Pongo abelii" [GO:0005198 "structural molecule activity" evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS] [GO:0009966 "regulation of signal transduction" evidence=ISS] GO:GO:0005886 GO:GO:0005737 GO:GO:0006909 GO:GO:0005856 GO:GO:0005198 GO:GO:0008360 GO:GO:0042995 GO:GO:0001891 GO:GO:0009966 InterPro:IPR000095 Pfam:PF00786 PROSITE:PS50108 Gene3D:3.90.810.10 HOVERGEN:HBG107546 HOGENOM:HOG000006512 CTD:56990 EMBL:CR861291 RefSeq:NP_001126978.1 UniGene:Pab.280 GeneID:100173997 KEGG:pon:100173997 InParanoid:Q5R4F8 Uniprot:Q5R4F8)

HSP 1 Score: 46.595 bits (109), Expect = 6.657e-7
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYG 45
            MIG PT+F HTAH+G+ DL S        S   + +QM SKGGYG
Sbjct:   28 MIGEPTNFAHTAHVGSGDLFSGMN-----SVSSIQNQMQSKGGYG 67

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BLAST of EMLSAG00000001930 vs. GO
Match: - (symbol:CDC42SE2 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0005198 "structural molecule activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0009966 "regulation of signal transduction" evidence=IEA] GO:GO:0005886 GO:GO:0005634 GO:GO:0005198 GO:GO:0009966 InterPro:IPR000095 Pfam:PF00786 PROSITE:PS50108 GeneTree:ENSGT00390000010375 OrthoDB:EOG74N5KD Gene3D:3.90.810.10 TreeFam:TF323815 OMA:ISANVQM EMBL:CU463941 Ensembl:ENSSSCT00000015588 Uniprot:F1RKI1)

HSP 1 Score: 46.2098 bits (108), Expect = 8.036e-7
Identity = 23/54 (42.59%), Postives = 31/54 (57.41%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRV 54
            MIG PT+F HTAH+G+ DL S        S   + +QM SKGGYG      +++
Sbjct:   28 MIGEPTNFVHTAHVGSGDLFSGMN-----SVSSIQNQMQSKGGYGGGMAANVQM 76

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BLAST of EMLSAG00000001930 vs. GO
Match: - (symbol:LOC100362023 "CDC42 small effector 2-like" species:10116 "Rattus norvegicus" [GO:0005198 "structural molecule activity" evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO] [GO:0009966 "regulation of signal transduction" evidence=ISO] REFSEQ:XM_002725569 Ncbi:XP_002725615)

HSP 1 Score: 45.8246 bits (107), Expect = 1.050e-6
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYG 45
            MIG PT+F HTAH+G+ DL S        S   + +QM SKGGYG
Sbjct:   28 MIGEPTNFVHTAHVGSGDLFSGMN-----SVSSIQNQMQSKGGYG 67

[Close]

BLAST of EMLSAG00000001930 vs. GO
Match: - (symbol:Cdc42se2 "CDC42 small effector 2" species:10090 "Mus musculus" [GO:0005198 "structural molecule activity" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO] [GO:0006909 "phagocytosis" evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA] [GO:0009966 "regulation of signal transduction" evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0042995 "cell projection" evidence=IEA] MGI:MGI:1919979 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0006909 GO:GO:0005856 GO:GO:0005198 GO:GO:0008360 GO:GO:0042995 GO:GO:0001891 GO:GO:0009966 InterPro:IPR000095 Pfam:PF00786 PROSITE:PS50108 eggNOG:NOG78697 GeneTree:ENSGT00390000010375 OrthoDB:EOG74N5KD Gene3D:3.90.810.10 HOVERGEN:HBG107546 TreeFam:TF323815 HOGENOM:HOG000006512 CTD:56990 OMA:ISANVQM EMBL:AK039301 EMBL:AK080473 EMBL:AK088090 EMBL:AK090381 EMBL:AK135775 EMBL:AK145931 EMBL:AK146313 EMBL:AK160934 EMBL:AL607091 EMBL:AL954817 EMBL:BC048935 RefSeq:NP_848741.1 RefSeq:XP_006534383.1 UniGene:Mm.29476 UniGene:Mm.431861 ProteinModelPortal:Q8BGH7 PhosphoSite:Q8BGH7 PaxDb:Q8BGH7 PRIDE:Q8BGH7 Ensembl:ENSMUST00000064104 GeneID:72729 KEGG:mmu:101056447 KEGG:mmu:72729 UCSC:uc007iyf.2 InParanoid:Q8BGH7 NextBio:336814 PRO:PR:Q8BGH7 ArrayExpress:Q8BGH7 Bgee:Q8BGH7 Genevestigator:Q8BGH7 Uniprot:Q8BGH7)

HSP 1 Score: 45.8246 bits (107), Expect = 1.050e-6
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYG 45
            MIG PT+F HTAH+G+ DL S        S   + +QM SKGGYG
Sbjct:   28 MIGEPTNFVHTAHVGSGDLFSGMN-----SVSSIQNQMQSKGGYG 67

[Close]

BLAST of EMLSAG00000001930 vs. GO
Match: - (symbol:CDC42SE2 "CDC42 small effector protein 2" species:9606 "Homo sapiens" [GO:0001891 "phagocytic cup" evidence=IEA] [GO:0005198 "structural molecule activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA] [GO:0006909 "phagocytosis" evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA] [GO:0009966 "regulation of signal transduction" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA] GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0006909 GO:GO:0005856 EMBL:CH471062 GO:GO:0005198 GO:GO:0008360 GO:GO:0042995 GO:GO:0001891 GO:GO:0009966 InterPro:IPR000095 Pfam:PF00786 PROSITE:PS50108 eggNOG:NOG78697 Gene3D:3.90.810.10 HOVERGEN:HBG107546 TreeFam:TF323815 HOGENOM:HOG000006512 CTD:56990 OMA:ISANVQM EMBL:AF189692 EMBL:AK312406 EMBL:BC096703 EMBL:BC096738 EMBL:BC098349 RefSeq:NP_001033791.1 RefSeq:NP_064625.1 UniGene:Hs.508829 UniGene:Hs.713870 ProteinModelPortal:Q9NRR3 BioGrid:121306 STRING:9606.ENSP00000353706 PhosphoSite:Q9NRR3 DMDM:74719133 PaxDb:Q9NRR3 PRIDE:Q9NRR3 Ensembl:ENST00000360515 Ensembl:ENST00000395246 Ensembl:ENST00000505065 GeneID:56990 KEGG:hsa:56990 UCSC:uc003kvh.3 GeneCards:GC05P130581 H-InvDB:HIX0005148 HGNC:HGNC:18547 HPA:HPA038624 neXtProt:NX_Q9NRR3 PharmGKB:PA133787056 InParanoid:Q9NRR3 PhylomeDB:Q9NRR3 SignaLink:Q9NRR3 GenomeRNAi:56990 NextBio:62683 PRO:PR:Q9NRR3 ArrayExpress:Q9NRR3 Bgee:Q9NRR3 CleanEx:HS_CDC42SE2 Genevestigator:Q9NRR3 Uniprot:Q9NRR3)

HSP 1 Score: 45.8246 bits (107), Expect = 1.050e-6
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYG 45
            MIG PT+F HTAH+G+ DL S        S   + +QM SKGGYG
Sbjct:   28 MIGEPTNFVHTAHVGSGDLFSGMN-----SVSSIQNQMQSKGGYG 67

[Close]

BLAST of EMLSAG00000001930 vs. GO
Match: - (symbol:Cdc42se2 "CDC42 small effector 2" species:10116 "Rattus norvegicus" [GO:0001891 "phagocytic cup" evidence=IEA] [GO:0005198 "structural molecule activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISS] [GO:0006909 "phagocytosis" evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA] [GO:0009966 "regulation of signal transduction" evidence=ISS] [GO:0042995 "cell projection" evidence=IEA] RGD:1563924 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0006909 GO:GO:0005856 GO:GO:0005198 GO:GO:0008360 GO:GO:0042995 GO:GO:0001891 GO:GO:0009966 InterPro:IPR000095 Pfam:PF00786 PROSITE:PS50108 eggNOG:NOG78697 OrthoDB:EOG74N5KD Gene3D:3.90.810.10 HOVERGEN:HBG107546 TreeFam:TF323815 HOGENOM:HOG000006512 EMBL:BC169039 UniGene:Rn.7470 STRING:10116.ENSRNOP00000061001 PRIDE:A1L1K4 UCSC:RGD:1563924 InParanoid:A1L1K4 Genevestigator:A1L1K4 Uniprot:A1L1K4)

HSP 1 Score: 45.8246 bits (107), Expect = 1.137e-6
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYG 45
            MIG PT+F HTAH+G+ DL S        S   + +QM SKGGYG
Sbjct:   27 MIGEPTNFVHTAHVGSGDLFSGMN-----SVSSIQNQMQSKGGYG 66

[Close]

BLAST of EMLSAG00000001930 vs. C. finmarchicus
Match: gi|592956294|gb|GAXK01002262.1| (TSA: Calanus finmarchicus comp91209_c0_seq15 transcribed RNA sequence)

HSP 1 Score: 56.9954 bits (136), Expect = 3.959e-10
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0

Query:    2 IGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRR 68
            IG P +FRHT H+G+ DL          S   L  QM  KGG    + V I+VPHI+NARS+ E+RR
Sbjct:  792 IGQPMNFRHTGHVGSTDLG---------SISTLQSQMKGKGG----EPVHIQVPHIMNARSIHEMRR 953

[Close]

BLAST of EMLSAG00000001930 vs. C. finmarchicus
Match: gi|592956295|gb|GAXK01002261.1| (TSA: Calanus finmarchicus comp91209_c0_seq14 transcribed RNA sequence)

HSP 1 Score: 56.9954 bits (136), Expect = 5.160e-10
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0

Query:    2 IGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRR 68
            IG P +FRHT H+G+ DL          S   L  QM  KGG    + V I+VPHI+NARS+ E+RR
Sbjct:  792 IGQPMNFRHTGHVGSTDLG---------SISTLQSQMKGKGG----EPVHIQVPHIMNARSIHEMRR 953

[Close]

BLAST of EMLSAG00000001930 vs. C. finmarchicus
Match: gi|592956296|gb|GAXK01002260.1| (TSA: Calanus finmarchicus comp91209_c0_seq13 transcribed RNA sequence)

HSP 1 Score: 56.9954 bits (136), Expect = 5.197e-10
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0

Query:    2 IGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRR 68
            IG P +FRHT H+G+ DL          S   L  QM  KGG    + V I+VPHI+NARS+ E+RR
Sbjct:  792 IGQPMNFRHTGHVGSTDLG---------SISTLQSQMKGKGG----EPVHIQVPHIMNARSIHEMRR 953

[Close]

BLAST of EMLSAG00000001930 vs. C. finmarchicus
Match: gi|592956297|gb|GAXK01002259.1| (TSA: Calanus finmarchicus comp91209_c0_seq12 transcribed RNA sequence)

HSP 1 Score: 56.9954 bits (136), Expect = 5.232e-10
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0

Query:    2 IGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRR 68
            IG P +FRHT H+G+ DL          S   L  QM  KGG    + V I+VPHI+NARS+ E+RR
Sbjct:  792 IGQPMNFRHTGHVGSTDLG---------SISTLQSQMKGKGG----EPVHIQVPHIMNARSIHEMRR 953

[Close]

BLAST of EMLSAG00000001930 vs. C. finmarchicus
Match: gi|592956303|gb|GAXK01002253.1| (TSA: Calanus finmarchicus comp91209_c0_seq6 transcribed RNA sequence)

HSP 1 Score: 56.9954 bits (136), Expect = 7.318e-10
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0

Query:    2 IGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRR 68
            IG P +FRHT H+G+ DL          S   L  QM  KGG    + V I+VPHI+NARS+ E+RR
Sbjct:  792 IGQPMNFRHTGHVGSTDLG---------SISTLQSQMKGKGG----EPVHIQVPHIMNARSIHEMRR 953

[Close]

BLAST of EMLSAG00000001930 vs. C. finmarchicus
Match: gi|592956304|gb|GAXK01002252.1| (TSA: Calanus finmarchicus comp91209_c0_seq5 transcribed RNA sequence)

HSP 1 Score: 56.9954 bits (136), Expect = 7.328e-10
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0

Query:    2 IGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRR 68
            IG P +FRHT H+G+ DL          S   L  QM  KGG    + V I+VPHI+NARS+ E+RR
Sbjct:  792 IGQPMNFRHTGHVGSTDLG---------SISTLQSQMKGKGG----EPVHIQVPHIMNARSIHEMRR 953

[Close]

BLAST of EMLSAG00000001930 vs. C. finmarchicus
Match: gi|592956305|gb|GAXK01002251.1| (TSA: Calanus finmarchicus comp91209_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 56.9954 bits (136), Expect = 7.336e-10
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0

Query:    2 IGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRR 68
            IG P +FRHT H+G+ DL          S   L  QM  KGG    + V I+VPHI+NARS+ E+RR
Sbjct:  792 IGQPMNFRHTGHVGSTDLG---------SISTLQSQMKGKGG----EPVHIQVPHIMNARSIHEMRR 953

[Close]

BLAST of EMLSAG00000001930 vs. C. finmarchicus
Match: gi|592956306|gb|GAXK01002250.1| (TSA: Calanus finmarchicus comp91209_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 56.9954 bits (136), Expect = 7.336e-10
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0

Query:    2 IGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRR 68
            IG P +FRHT H+G+ DL          S   L  QM  KGG    + V I+VPHI+NARS+ E+RR
Sbjct:  792 IGQPMNFRHTGHVGSTDLG---------SISTLQSQMKGKGG----EPVHIQVPHIMNARSIHEMRR 953

[Close]

BLAST of EMLSAG00000001930 vs. C. finmarchicus
Match: gi|592956307|gb|GAXK01002249.1| (TSA: Calanus finmarchicus comp91209_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 56.9954 bits (136), Expect = 7.346e-10
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0

Query:    2 IGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRR 68
            IG P +FRHT H+G+ DL          S   L  QM  KGG    + V I+VPHI+NARS+ E+RR
Sbjct:  792 IGQPMNFRHTGHVGSTDLG---------SISTLQSQMKGKGG----EPVHIQVPHIMNARSIHEMRR 953

[Close]

BLAST of EMLSAG00000001930 vs. C. finmarchicus
Match: gi|592956308|gb|GAXK01002248.1| (TSA: Calanus finmarchicus comp91209_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 56.9954 bits (136), Expect = 7.363e-10
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 0

Query:    2 IGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRR 68
            IG P +FRHT H+G+ DL          S   L  QM  KGG    + V I+VPHI+NARS+ E+RR
Sbjct:  792 IGQPMNFRHTGHVGSTDLG---------SISTLQSQMKGKGG----EPVHIQVPHIMNARSIHEMRR 953

[Close]

BLAST of EMLSAG00000001930 vs. L. salmonis peptides
Match: EMLSAP00000001930 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1338:60906:61115:1 gene:EMLSAG00000001930 transcript:EMLSAT00000001930 description:"snap_masked-LSalAtl2s1338-processed-gene-0.2")

HSP 1 Score: 145.591 bits (366), Expect = 6.457e-47
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRRK 69
            MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRRK
Sbjct:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRRK 69

[Close]

BLAST of EMLSAG00000001930 vs. SwissProt
Match: gi|123892795|sp|Q28EW5.1|C4S2A_XENTR (RecName: Full=CDC42 small effector protein 2-A)

HSP 1 Score: 47.3654 bits (111), Expect = 1.016e-7
Identity = 23/54 (42.59%), Postives = 32/54 (59.26%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRV 54
            MIG PT+F HTAH+G+ DL S        S   + +QM SKGGYG +    +++
Sbjct:   28 MIGEPTNFVHTAHVGSGDLFSGMN-----SVSSIQNQMQSKGGYGGNMSANVQM 76

[Close]

BLAST of EMLSAG00000001930 vs. SwissProt
Match: gi|189081519|sp|A6QLJ4.1|C42S2_BOVIN (RecName: Full=CDC42 small effector protein 2)

HSP 1 Score: 46.595 bits (109), Expect = 1.769e-7
Identity = 23/54 (42.59%), Postives = 31/54 (57.41%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRV 54
            MIG PT+F HTAH+G+ DL S        S   + +QM SKGGYG      +++
Sbjct:   28 MIGEPTNFVHTAHVGSGDLFSGMN-----SVSSIQNQMQSKGGYGGGMAANVQM 76

[Close]

BLAST of EMLSAG00000001930 vs. SwissProt
Match: gi|75040956|sp|Q5R4F8.1|C42S2_PONAB (RecName: Full=CDC42 small effector protein 2)

HSP 1 Score: 46.595 bits (109), Expect = 1.930e-7
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYG 45
            MIG PT+F HTAH+G+ DL S        S   + +QM SKGGYG
Sbjct:   28 MIGEPTNFAHTAHVGSGDLFSGMN-----SVSSIQNQMQSKGGYG 67

[Close]

BLAST of EMLSAG00000001930 vs. SwissProt
Match: gi|74719133|sp|Q9NRR3.1|C42S2_HUMAN (RecName: Full=CDC42 small effector protein 2; AltName: Full=Small effector of CDC42 protein 2 >gi|81896016|sp|Q8BGH7.1|C42S2_MOUSE RecName: Full=CDC42 small effector protein 2)

HSP 1 Score: 45.8246 bits (107), Expect = 3.181e-7
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYG 45
            MIG PT+F HTAH+G+ DL S        S   + +QM SKGGYG
Sbjct:   28 MIGEPTNFVHTAHVGSGDLFSGMN-----SVSSIQNQMQSKGGYG 67

[Close]

BLAST of EMLSAG00000001930 vs. SwissProt
Match: gi|259016190|sp|A1L1K4.2|C42S2_RAT (RecName: Full=CDC42 small effector protein 2)

HSP 1 Score: 45.8246 bits (107), Expect = 3.433e-7
Identity = 23/45 (51.11%), Postives = 28/45 (62.22%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYG 45
            MIG PT+F HTAH+G+ DL S        S   + +QM SKGGYG
Sbjct:   27 MIGEPTNFVHTAHVGSGDLFSGMN-----SVSSIQNQMQSKGGYG 66

[Close]

BLAST of EMLSAG00000001930 vs. SwissProt
Match: gi|189081520|sp|A9JR56.1|C42S2_DANRE (RecName: Full=CDC42 small effector protein 2)

HSP 1 Score: 45.4394 bits (106), Expect = 5.592e-7
Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPD 47
            MIG PT+F HTAH+G+ DL +        S + + +QM SKGGYG +
Sbjct:   28 MIGEPTNFVHTAHVGSGDLFTGMN-----SVNSIQNQMQSKGGYGGE 69

[Close]

BLAST of EMLSAG00000001930 vs. Select Arthropod Genomes
Match: EEB16994.1 (conserved hypothetical protein [Pediculus humanus corporis])

HSP 1 Score: 52.373 bits (124), Expect = 6.272e-10
Identity = 29/62 (46.77%), Postives = 36/62 (58.06%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARS 62
            MIG P +F+HT HIG+ DL+   E  H    D L  QM SKGGYG    V+I V  +V  R+
Sbjct:   44 MIGYPMNFQHTVHIGSGDLEI--ESSH---LDALQGQMQSKGGYGKAYIVKINVALVVVERT 100

[Close]

BLAST of EMLSAG00000001930 vs. Select Arthropod Genomes
Match: gb|KFM71566.1| (CDC42 small effector protein 2, partial [Stegodyphus mimosarum])

HSP 1 Score: 50.447 bits (119), Expect = 2.164e-9
Identity = 25/55 (45.45%), Postives = 34/55 (61.82%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVP 55
            MIG+PT+FRHTAH+G+ D+        N   + L HQM SKGGY     V +++P
Sbjct:   29 MIGSPTNFRHTAHVGSGDM--------NVHLNSLQHQMASKGGYEYAIPVNVQIP 75

[Close]

BLAST of EMLSAG00000001930 vs. Select Arthropod Genomes
Match: gb|EEC10487.1| (hypothetical protein IscW_ISCW007778 [Ixodes scapularis])

HSP 1 Score: 47.7506 bits (112), Expect = 2.131e-7
Identity = 26/58 (44.83%), Postives = 33/58 (56.90%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQK---VQIRVP 55
            MIGNPT+F+HTAH+G+ D+            + L +QM SKGGY  D K      RVP
Sbjct:   52 MIGNPTNFQHTAHVGSGDMSVH--------LNALQNQMASKGGYDNDTKAAHAAFRVP 101

[Close]

BLAST of EMLSAG00000001930 vs. nr
Match: gi|290462643|gb|ADD24369.1| (CDC42 small effector protein 2-A [Lepeophtheirus salmonis] >gi|290561917|gb|ADD38356.1| CDC42 small effector protein 2-A [Lepeophtheirus salmonis])

HSP 1 Score: 147.517 bits (371), Expect = 8.519e-45
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0

Query:    1 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRRK 69
            MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRRK
Sbjct:   29 MIGNPTDFRHTAHIGTNDLDSQEEDPHNRSTDYLTHQMNSKGGYGPDQKVQIRVPHIVNARSLDEIRRK 97

The following BLAST results are available for this feature:

BLAST of EMLSAG00000001930 vs. GO
BLAST of EMLSAG00000001930 vs. C. finmarchicus
BLAST of EMLSAG00000001930 vs. L. salmonis peptides
BLAST of EMLSAG00000001930 vs. SwissProt
BLAST of EMLSAG00000001930 vs. Select Arthropod Genomes
BLAST of EMLSAG00000001930 vs. nr
BLAST of EMLSAG00000001930 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000001930 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 13


Match Name	E-value	Identity	Description
-	3.704e-7	42.59	symbol:cdc42se2-A "CDC42 small effector protein 2-...	[more]
-	4.942e-7	42.59	symbol:CDC42SE2 "Uncharacterized protein" species:...	[more]
-	6.076e-7	51.11	symbol:Gga.2962 "Uncharacterized protein" species:...	[more]
-	6.149e-7	42.59	symbol:CDC42SE2 "CDC42 small effector protein 2" s...	[more]
-	6.657e-7	51.11	symbol:CDC42SE2 "CDC42 small effector protein 2" s...	[more]
-	8.036e-7	42.59	symbol:CDC42SE2 "Uncharacterized protein" species:...	[more]
-	1.050e-6	51.11	symbol:LOC100362023 "CDC42 small effector 2-like" ...	[more]
-	1.050e-6	51.11	symbol:Cdc42se2 "CDC42 small effector 2" species:1...	[more]
-	1.050e-6	51.11	symbol:CDC42SE2 "CDC42 small effector protein 2" s...	[more]
-	1.137e-6	51.11	symbol:Cdc42se2 "CDC42 small effector 2" species:1...	[more]

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BLAST of EMLSAG00000001930 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 21


Match Name	E-value	Identity	Description
gi\|592956294\|gb\|GAXK01002262.1\|	3.959e-10	46.27	TSA: Calanus finmarchicus comp91209_c0_seq15 trans...	[more]
gi\|592956295\|gb\|GAXK01002261.1\|	5.160e-10	46.27	TSA: Calanus finmarchicus comp91209_c0_seq14 trans...	[more]
gi\|592956296\|gb\|GAXK01002260.1\|	5.197e-10	46.27	TSA: Calanus finmarchicus comp91209_c0_seq13 trans...	[more]
gi\|592956297\|gb\|GAXK01002259.1\|	5.232e-10	46.27	TSA: Calanus finmarchicus comp91209_c0_seq12 trans...	[more]
gi\|592956303\|gb\|GAXK01002253.1\|	7.318e-10	46.27	TSA: Calanus finmarchicus comp91209_c0_seq6 transc...	[more]
gi\|592956304\|gb\|GAXK01002252.1\|	7.328e-10	46.27	TSA: Calanus finmarchicus comp91209_c0_seq5 transc...	[more]
gi\|592956305\|gb\|GAXK01002251.1\|	7.336e-10	46.27	TSA: Calanus finmarchicus comp91209_c0_seq4 transc...	[more]
gi\|592956306\|gb\|GAXK01002250.1\|	7.336e-10	46.27	TSA: Calanus finmarchicus comp91209_c0_seq3 transc...	[more]
gi\|592956307\|gb\|GAXK01002249.1\|	7.346e-10	46.27	TSA: Calanus finmarchicus comp91209_c0_seq2 transc...	[more]
gi\|592956308\|gb\|GAXK01002248.1\|	7.363e-10	46.27	TSA: Calanus finmarchicus comp91209_c0_seq1 transc...	[more]

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BLAST of EMLSAG00000001930 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAP00000001930	6.457e-47	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1338:6090...	[more]

BLAST of EMLSAG00000001930 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 6


Match Name	E-value	Identity	Description
gi\|123892795\|sp\|Q28EW5.1\|C4S2A_XENTR	1.016e-7	42.59	RecName: Full=CDC42 small effector protein 2-A	[more]
gi\|189081519\|sp\|A6QLJ4.1\|C42S2_BOVIN	1.769e-7	42.59	RecName: Full=CDC42 small effector protein 2	[more]
gi\|75040956\|sp\|Q5R4F8.1\|C42S2_PONAB	1.930e-7	51.11	RecName: Full=CDC42 small effector protein 2	[more]
gi\|74719133\|sp\|Q9NRR3.1\|C42S2_HUMAN	3.181e-7	51.11	RecName: Full=CDC42 small effector protein 2; AltN...	[more]
gi\|259016190\|sp\|A1L1K4.2\|C42S2_RAT	3.433e-7	51.11	RecName: Full=CDC42 small effector protein 2	[more]
gi\|189081520\|sp\|A9JR56.1\|C42S2_DANRE	5.592e-7	46.81	RecName: Full=CDC42 small effector protein 2	[more]

BLAST of EMLSAG00000001930 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 3


Match Name	E-value	Identity	Description
EEB16994.1	6.272e-10	46.77	conserved hypothetical protein [Pediculus humanus ...	[more]
gb\|KFM71566.1\|	2.164e-9	45.45	CDC42 small effector protein 2, partial [Stegodyph...	[more]
gb\|EEC10487.1\|	2.131e-7	44.83	hypothetical protein IscW_ISCW007778 [Ixodes scapu...	[more]

BLAST of EMLSAG00000001930 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1


Match Name	E-value	Identity	Description
gi\|290462643\|gb\|ADD24369.1\|	8.519e-45	100.00	CDC42 small effector protein 2-A [Lepeophtheirus s...	[more]

BLAST of EMLSAG00000001930 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1338	supercontig	LSalAtl2s1338:60906..61115 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	snap_masked-LSalAtl2s1338-processed-gene-0.2
Biotype	protein_coding
Evidence	IEA
Note	CDC42 small effector protein 2-A [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000001930 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000001930	EMLSAT00000001930-697777	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1338:60906..61115+

gene from alignment at LSalAtl2s1338:60906..61115+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000001930-684696 ID=EMLSAG00000001930-684696|Name=EMLSAG00000001930|organism=Lepeophtheirus salmonis|type=gene|length=210bp|location=Sequence derived from alignment at LSalAtl2s1338:60906..61115+ (Lepeophtheirus salmonis)
ATGATTGGCAATCCTACAGACTTTCGCCACACTGCGCATATAGGGACGAA
TGATTTGGACAGTCAAGAGGAGGATCCGCATAATCGAAGTACAGATTACT
TAACTCATCAAATGAACTCTAAAGGGGGATACGGCCCTGATCAAAAAGTA
CAAATACGAGTGCCTCATATTGTCAATGCGCGTTCCTTGGATGAAATAAG
ACGGAAGTGA

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