EMLSAG00000008420, EMLSAG00000008420-691186 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000008420
Unique NameEMLSAG00000008420-691186
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000008420 vs. GO
Match: - (symbol:LYRM4 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR008011 GeneTree:ENSGT00390000001425 Pfam:PF13232 CTD:57128 EMBL:AADN03002668 RefSeq:NP_001185817.1 UniGene:Gga.29616 Ensembl:ENSGALT00000045841 GeneID:420874 KEGG:gga:420874 Uniprot:R4GGF7)

HSP 1 Score: 48.9062 bits (115), Expect = 8.184e-8
Identity = 24/60 (40.00%), Postives = 40/60 (66.67%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPESALLSQKLI 62
            ++AIRR RDAF  NK++ D  +I+  + +AK+++ +I RQ TI Q++A       +QKL+
Sbjct:   30 TYAIRRIRDAFRENKSIKDSEKIEELVNKAKENLEIIHRQVTIGQMYA-------TQKLV 82
[Close]
BLAST of EMLSAG00000008420 vs. GO
Match: - (symbol:LYRM4 "LYR motif-containing protein 4" species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] Pfam:PF05347 GO:GO:0005739 GO:GO:0005634 InterPro:IPR008011 eggNOG:NOG239450 GeneTree:ENSGT00390000001425 OMA:AYNFREY OrthoDB:EOG7P5T3C UniPathway:UPA00266 HOGENOM:HOG000038164 EMBL:BC120188 RefSeq:NP_001069774.1 UniGene:Bt.74487 STRING:9913.ENSBTAP00000042040 PRIDE:Q0VCG0 Ensembl:ENSBTAT00000044551 GeneID:614011 KEGG:bta:614011 CTD:57128 HOVERGEN:HBG050915 InParanoid:Q0VCG0 TreeFam:TF323581 NextBio:20898893 Uniprot:Q0VCG0)

HSP 1 Score: 47.3654 bits (111), Expect = 2.632e-7
Identity = 22/58 (37.93%), Postives = 37/58 (63.79%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPESALLSQK 60
            ++AIRR RDAF  NKN+ D  EI   + +AK  + +I+RQ  I Q+++  +  + +Q+
Sbjct:   30 TYAIRRIRDAFRENKNVKDPVEIQALVNKAKRDLGIIRRQVHIGQMYSTDKLVIENQE 87
[Close]
BLAST of EMLSAG00000008420 vs. GO
Match: - (symbol:LYRM4 "LYR motif-containing protein 4" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005759 "mitochondrial matrix" evidence=TAS] [GO:0044281 "small molecule metabolic process" evidence=TAS] Reactome:REACT_111217 GO:GO:0005634 GO:GO:0044281 GO:GO:0005759 InterPro:IPR008011 eggNOG:NOG239450 OMA:AYNFREY Pfam:PF13232 UniPathway:UPA00266 HOGENOM:HOG000038164 CTD:57128 HOVERGEN:HBG050915 EMBL:AF285118 EMBL:AF170070 EMBL:AK291158 EMBL:AL035653 EMBL:AL121978 EMBL:AL162381 EMBL:BC009552 RefSeq:NP_001158313.1 RefSeq:NP_065141.3 UniGene:Hs.387755 ProteinModelPortal:Q9HD34 BioGrid:121391 IntAct:Q9HD34 STRING:9606.ENSP00000420026 PhosphoSite:Q9HD34 DMDM:46576652 PaxDb:Q9HD34 PRIDE:Q9HD34 DNASU:57128 Ensembl:ENST00000330636 GeneID:57128 KEGG:hsa:57128 UCSC:uc003mwp.3 GeneCards:GC06M005103 HGNC:HGNC:21365 HPA:HPA030362 MIM:613311 neXtProt:NX_Q9HD34 PharmGKB:PA162394762 InParanoid:Q9HD34 GenomeRNAi:57128 NextBio:63033 PRO:PR:Q9HD34 ArrayExpress:Q9HD34 Bgee:Q9HD34 CleanEx:HS_LYRM4 Genevestigator:Q9HD34 Uniprot:Q9HD34)

HSP 1 Score: 46.9802 bits (110), Expect = 3.512e-7
Identity = 21/48 (43.75%), Postives = 32/48 (66.67%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFA 50
            ++A+RR RDAF  NKN+ D  EI   + +AK  + +I+RQ  I QL++
Sbjct:   30 TYAVRRIRDAFRENKNVKDPVEIQTLVNKAKRDLGVIRRQVHIGQLYS 77
[Close]
BLAST of EMLSAG00000008420 vs. GO
Match: - (symbol:Lyrm4 "LYR motif containing 4" species:10090 "Mus musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0008150 "biological_process" evidence=ND] MGI:MGI:2683538 Pfam:PF05347 GO:GO:0005739 GO:GO:0005634 InterPro:IPR008011 eggNOG:NOG239450 GeneTree:ENSGT00390000001425 OMA:AYNFREY OrthoDB:EOG7P5T3C UniPathway:UPA00266 HOGENOM:HOG000038164 CTD:57128 HOVERGEN:HBG050915 TreeFam:TF323581 EMBL:AK050553 EMBL:BC034664 EMBL:BC080772 RefSeq:NP_958746.1 UniGene:Mm.390576 ProteinModelPortal:Q8K215 STRING:10090.ENSMUSP00000060779 PhosphoSite:Q8K215 PaxDb:Q8K215 PRIDE:Q8K215 Ensembl:ENSMUST00000053265 GeneID:380840 KEGG:mmu:380840 UCSC:uc007qcj.1 InParanoid:Q8K215 NextBio:401301 PRO:PR:Q8K215 Bgee:Q8K215 CleanEx:MM_LYRM4 Genevestigator:Q8K215 Uniprot:Q8K215)

HSP 1 Score: 46.2098 bits (108), Expect = 7.992e-7
Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 0 
Query:    4 FAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFA 50
            +A+RR RDAF  NKN+ D  EI   + +AK  + +I+RQ  I QL++
Sbjct:   31 YAVRRIRDAFRENKNVKDPVEIQALVNKAKRDLEIIRRQVHIGQLYS 77
[Close]
BLAST of EMLSAG00000008420 vs. GO
Match: - (symbol:CPAR2_500640 species:5480 "Candida parapsilosis" [GO:0016226 "iron-sulfur cluster assembly" evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0031314 "extrinsic component of mitochondrial inner membrane" evidence=IEA] [GO:0008047 "enzyme activator activity" evidence=IEA] InterPro:IPR008011 Pfam:PF13232 OrthoDB:EOG72RNBN EMBL:HE605207 Uniprot:G8BHB4)

HSP 1 Score: 45.8246 bits (107), Expect = 9.905e-7
Identity = 22/48 (45.83%), Postives = 31/48 (64.58%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFA 50
             ++ RR  DAF  +K LTD  +I+    E  D++AL+ RQTTISQL+ 
Sbjct:   28 EYSKRRVHDAFKEHKYLTDEEQINKFYNEGIDNLALLTRQTTISQLYT 75
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BLAST of EMLSAG00000008420 vs. GO
Match: - (symbol:Lyrm4 "LYR motif containing 4" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO] RGD:2324607 Pfam:PF05347 GO:GO:0005739 InterPro:IPR008011 OMA:AYNFREY OrthoDB:EOG7P5T3C Pfam:PF13232 EMBL:CH473977 TreeFam:TF323581 EMBL:AABR06091139 EMBL:AABR06091140 EMBL:AABR06091141 RefSeq:XP_006222439.1 RefSeq:XP_006253921.1 Ensembl:ENSRNOT00000072056 GeneID:102550385 UCSC:RGD:2324607 NextBio:35571158 Uniprot:D3ZYM7)

HSP 1 Score: 45.8246 bits (107), Expect = 1.013e-6
Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 0 
Query:    4 FAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFA 50
            +A+RR RDAF  NKN+ D  EI   + +AK  + +I+RQ  I QL++
Sbjct:   31 YAVRRIRDAFRENKNVKDPVEIQALVNKAKRDLEIIRRQVLIGQLYS 77
[Close]
BLAST of EMLSAG00000008420 vs. GO
Match: - (symbol:bcn92 "Protein bcn92" species:7241 "Drosophila subobscura" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR008011 EMBL:Z46522 FlyBase:FBgn0012951 Pfam:PF13232 Uniprot:P82116)

HSP 1 Score: 45.4394 bits (106), Expect = 1.483e-6
Identity = 21/59 (35.59%), Postives = 39/59 (66.10%), Query Frame = 0 
Query:    4 FAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPESALLSQKLI 62
            +A+R+ RDAF +NK + D +EID +++  K ++ LI+RQ  I  L+ A +  + ++K +
Sbjct:   29 YAVRKIRDAFRANKAIRDFAEIDRQMEAGKQNLELIRRQVIIGHLYTADKLVIENKKTL 87
[Close]
BLAST of EMLSAG00000008420 vs. GO
Match: - (symbol:bcn92 "bcn92" species:7227 "Drosophila melanogaster" [GO:0008150 "biological_process" evidence=ND] [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] Pfam:PF05347 EMBL:AE014298 EMBL:Z98269 InterPro:IPR008011 EMBL:AY071542 EMBL:Z46608 PIR:T13609 RefSeq:NP_477059.2 UniGene:Dm.31061 BioGrid:57727 STRING:7227.FBpp0070415 PaxDb:O46098 PRIDE:O46098 EnsemblMetazoa:FBtr0070431 GeneID:31186 KEGG:dme:Dmel_CG3717 UCSC:CG3717-RA CTD:31186 FlyBase:FBgn0013432 eggNOG:NOG239450 GeneTree:ENSGT00390000001425 InParanoid:O46098 OMA:AYNFREY OrthoDB:EOG7P5T3C PhylomeDB:O46098 GenomeRNAi:31186 NextBio:772359 PRO:PR:O46098 Bgee:O46098 Uniprot:O46098)

HSP 1 Score: 41.2022 bits (95), Expect = 4.025e-5
Identity = 19/59 (32.20%), Postives = 38/59 (64.41%), Query Frame = 0 
Query:    4 FAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPESALLSQKLI 62
            +A R+ RD F +N++  D +EID ++ E + ++ LI+RQ  I  L++A +  + ++K +
Sbjct:   29 YAARKIRDTFRANRSTRDFAEIDRQMAEGQQNLELIRRQVIIGHLYSADKLVIENKKTL 87
[Close]
BLAST of EMLSAG00000008420 vs. GO
Match: - (symbol:LYRM4 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA] Pfam:PF05347 GO:GO:0005739 InterPro:IPR008011 GeneTree:ENSGT00390000001425 OrthoDB:EOG7P5T3C EMBL:AAEX03017497 Ensembl:ENSCAFT00000047941 Uniprot:J9P555)

HSP 1 Score: 39.6614 bits (91), Expect = 1.029e-4
Identity = 18/41 (43.90%), Postives = 28/41 (68.29%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQT 43
            ++A+RR RDAF  NKN+ D +EI   + +AK  + +I+RQ 
Sbjct:    8 TYAVRRIRDAFRENKNVKDPAEIQALVNKAKRDLGIIRRQV 48
[Close]
BLAST of EMLSAG00000008420 vs. GO
Match: - (symbol:LYRM4 "LYR motif-containing protein 4" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739 InterPro:IPR008011 Pfam:PF13232 CTD:57128 TreeFam:TF323581 EMBL:AL035653 EMBL:AL121978 EMBL:AL162381 UniGene:Hs.387755 DNASU:57128 GeneID:57128 KEGG:hsa:57128 HGNC:HGNC:21365 GenomeRNAi:57128 NextBio:63033 RefSeq:NP_001158312.1 PRIDE:F5H189 Ensembl:ENST00000500576 UCSC:uc021ykw.1 ArrayExpress:F5H189 Bgee:F5H189 Uniprot:F5H189)

HSP 1 Score: 40.0466 bits (92), Expect = 1.442e-4
Identity = 18/40 (45.00%), Postives = 27/40 (67.50%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQ 42
            ++A+RR RDAF  NKN+ D  EI   + +AK  + +I+RQ
Sbjct:   30 TYAVRRIRDAFRENKNVKDPVEIQTLVNKAKRDLGVIRRQ 69
[Close]
BLAST of EMLSAG00000008420 vs. L. salmonis peptides
Match: EMLSAP00000008420 (pep:novel supercontig:LSalAtl2s:LSalAtl2s515:114591:114857:-1 gene:EMLSAG00000008420 transcript:EMLSAT00000008420 description:"snap_masked-LSalAtl2s515-processed-gene-1.18")

HSP 1 Score: 122.479 bits (306), Expect = 5.386e-38
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 
Query:    1 MGSFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPESALLSQKLI 62
            MGSFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPESALLSQKLI
Sbjct:    1 MGSFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPESALLSQKLI 62
[Close]
BLAST of EMLSAG00000008420 vs. SwissProt
Match: gi|82182295|sp|Q6DCS1.1|LYRM4_XENLA (RecName: Full=LYR motif-containing protein 4)

HSP 1 Score: 47.3654 bits (111), Expect = 6.912e-8
Identity = 22/51 (43.14%), Postives = 35/51 (68.63%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPE 53
            ++AIRR RDAF   KN+ D  EI+  +  AK+++ +I+RQ TI Q++A  +
Sbjct:   30 TYAIRRIRDAFREKKNVDDFLEIETLLHRAKENLNVIQRQVTIGQMYATHK 80
[Close]
BLAST of EMLSAG00000008420 vs. SwissProt
Match: gi|122143491|sp|Q0VCG0.1|LYRM4_BOVIN (RecName: Full=LYR motif-containing protein 4)

HSP 1 Score: 47.3654 bits (111), Expect = 7.213e-8
Identity = 22/58 (37.93%), Postives = 37/58 (63.79%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPESALLSQK 60
            ++AIRR RDAF  NKN+ D  EI   + +AK  + +I+RQ  I Q+++  +  + +Q+
Sbjct:   30 TYAIRRIRDAFRENKNVKDPVEIQALVNKAKRDLGIIRRQVHIGQMYSTDKLVIENQE 87
[Close]
BLAST of EMLSAG00000008420 vs. SwissProt
Match: gi|46576652|sp|Q9HD34.1|LYRM4_HUMAN (RecName: Full=LYR motif-containing protein 4)

HSP 1 Score: 46.9802 bits (110), Expect = 9.884e-8
Identity = 21/48 (43.75%), Postives = 32/48 (66.67%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFA 50
            ++A+RR RDAF  NKN+ D  EI   + +AK  + +I+RQ  I QL++
Sbjct:   30 TYAVRRIRDAFRENKNVKDPVEIQTLVNKAKRDLGVIRRQVHIGQLYS 77
[Close]
BLAST of EMLSAG00000008420 vs. SwissProt
Match: gi|226694801|sp|B5FZA8.1|LYRM4_TAEGU (RecName: Full=LYR motif-containing protein 4)

HSP 1 Score: 46.595 bits (109), Expect = 1.649e-7
Identity = 21/48 (43.75%), Postives = 34/48 (70.83%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFA 50
            ++AIRR RDAF  NKN+ D  +I+  + +AK ++ +I+RQ TI  ++A
Sbjct:   30 TYAIRRIRDAFRENKNIADSEKIEELLNKAKANLEVIQRQGTIDHMYA 77
[Close]
BLAST of EMLSAG00000008420 vs. SwissProt
Match: gi|46576605|sp|Q8K215.1|LYRM4_MOUSE (RecName: Full=LYR motif-containing protein 4)

HSP 1 Score: 46.2098 bits (108), Expect = 2.434e-7
Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 0 
Query:    4 FAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFA 50
            +A+RR RDAF  NKN+ D  EI   + +AK  + +I+RQ  I QL++
Sbjct:   31 YAVRRIRDAFRENKNVKDPVEIQALVNKAKRDLEIIRRQVHIGQLYS 77
[Close]
BLAST of EMLSAG00000008420 vs. SwissProt
Match: gi|29427423|sp|P82116.1|BCN92_DROSU (RecName: Full=Protein bcn92)

HSP 1 Score: 45.4394 bits (106), Expect = 4.867e-7
Identity = 21/59 (35.59%), Postives = 39/59 (66.10%), Query Frame = 0 
Query:    4 FAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPESALLSQKLI 62
            +A+R+ RDAF +NK + D +EID +++  K ++ LI+RQ  I  L+ A +  + ++K +
Sbjct:   29 YAVRKIRDAFRANKAIRDFAEIDRQMEAGKQNLELIRRQVIIGHLYTADKLVIENKKTL 87
[Close]
BLAST of EMLSAG00000008420 vs. Select Arthropod Genomes
Match: EAU76964.2 (AGAP004196-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 51.6026 bits (122), Expect = 6.877e-10
Identity = 23/56 (41.07%), Postives = 38/56 (67.86%), Query Frame = 0 
Query:    4 FAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPESALLSQ 59
            +A+RR RDAF  N+ LTD + I  ++  A+ ++ +IKRQT I QL+ AP+  ++ +
Sbjct:   32 YALRRIRDAFRENRALTDNAAIASELSYAQKNLEIIKRQTIIGQLYGAPDKLVIEK 87
[Close]
BLAST of EMLSAG00000008420 vs. Select Arthropod Genomes
Match: EFX87649.1 (hypothetical protein DAPPUDRAFT_306461 [Daphnia pulex])

HSP 1 Score: 45.4394 bits (106), Expect = 1.768e-7
Identity = 21/58 (36.21%), Postives = 37/58 (63.79%), Query Frame = 0 
Query:    4 FAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPESALLSQKL 61
            +A+ R RDAF  NKNLTD + +  ++ E   ++A+IKRQ  I  +F  P+  ++ +++
Sbjct:   30 YALMRVRDAFHENKNLTDATAVKKQVAEGYKNLAIIKRQVIIGDMF-EPQRLVIEKQI 86
[Close]
BLAST of EMLSAG00000008420 vs. Select Arthropod Genomes
Match: EEB16834.1 (conserved hypothetical protein [Pediculus humanus corporis])

HSP 1 Score: 45.4394 bits (106), Expect = 1.971e-7
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLF 49
            ++AIRR RDAF +NKNL D   I+    EA  ++A+IKRQ  I+ ++
Sbjct:   29 NYAIRRIRDAFKANKNLQDCDAIEAAYNEAFTTLAIIKRQVVIADMY 75
[Close]
BLAST of EMLSAG00000008420 vs. nr
Match: gi|290561795|gb|ADD38295.1| (LYR motif-containing protein 4 [Lepeophtheirus salmonis])

HSP 1 Score: 117.087 bits (292), Expect = 4.003e-33
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPESALLSQKLI 62
            SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPESALLSQKLI
Sbjct:   27 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPESALLSQKLI 86
[Close]
BLAST of EMLSAG00000008420 vs. nr
Match: gi|225710316|gb|ACO11004.1| (LYR motif-containing protein 4 [Caligus rogercresseyi])

HSP 1 Score: 69.707 bits (169), Expect = 2.955e-14
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLF--AAPES 54
            +FAIRRS+DAF SNK+L D  EI  KI+EAKD IALI+RQ+T+SQLF  AAP +
Sbjct:   28 AFAIRRSKDAFSSNKHLKDELEISSKIQEAKDGIALIQRQSTVSQLFGSAAPNT 81
[Close]
BLAST of EMLSAG00000008420 vs. nr
Match: gi|50550525|ref|XP_502735.1| (YALI0D12254p [Yarrowia lipolytica] >gi|49648603|emb|CAG80923.1| YALI0D12254p [Yarrowia lipolytica CLIB122] >gi|1078656848|gb|AOW03961.1| hypothetical protein YALI1_D15296g [Yarrowia lipolytica] >gi|1093601088|emb|SEI36529.1| YALIA101S12e01882g1_1 [Yarrowia lipolytica])

HSP 1 Score: 59.6918 bits (143), Expect = 3.138e-10
Identity = 24/48 (50.00%), Postives = 37/48 (77.08%), Query Frame = 0 
Query:    4 FAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAA 51
            +AIRR+RD F +N+NLTD+ EI+  IK A+  + ++KRQ+ ISQ++A 
Sbjct:   30 YAIRRTRDGFHANRNLTDKGEIESAIKYAEKELGVLKRQSVISQMYAG 77
[Close]
BLAST of EMLSAG00000008420 vs. nr
Match: gi|975086039|ref|XP_015276647.1| (PREDICTED: LYR motif-containing protein 4 [Gekko japonicus])

HSP 1 Score: 56.9954 bits (136), Expect = 2.475e-9
Identity = 25/51 (49.02%), Postives = 37/51 (72.55%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPE 53
            ++AIRR RDAF  NKNL + +EI+  +  AK ++ +I RQ TI QL++AP+
Sbjct:   31 TYAIRRIRDAFRENKNLKNSAEIETLVNNAKTNLEMIHRQVTIGQLYSAPK 81
[Close]
BLAST of EMLSAG00000008420 vs. nr
Match: gi|1002574578|ref|XP_015666336.1| (PREDICTED: LYR motif-containing protein 4 [Protobothrops mucrosquamatus])

HSP 1 Score: 53.9138 bits (128), Expect = 4.026e-8
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAA 51
            ++AIR+ RDAF  NKN+ + SEID  I +AK ++ +I RQ TI QL+ A
Sbjct:   30 TYAIRKIRDAFRENKNIQESSEIDTLINKAKTNLEMIHRQVTIGQLYTA 78
[Close]
BLAST of EMLSAG00000008420 vs. nr
Match: gi|585665854|ref|XP_006817011.1| (PREDICTED: LYR motif-containing protein 4-like [Saccoglossus kowalevskii])

HSP 1 Score: 53.5286 bits (127), Expect = 4.872e-8
Identity = 24/51 (47.06%), Postives = 40/51 (78.43%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPE 53
            ++AIRR RD+F  NK++T+  +I   I +A++++A+I+RQT ISQL+A P+
Sbjct:   15 NYAIRRIRDSFKENKSITNPEQISGLINKAEENLAVIRRQTVISQLYAEPK 65
[Close]
BLAST of EMLSAG00000008420 vs. nr
Match: gi|156385502|ref|XP_001633669.1| (predicted protein [Nematostella vectensis] >gi|156220742|gb|EDO41606.1| predicted protein [Nematostella vectensis])

HSP 1 Score: 53.1434 bits (126), Expect = 1.345e-7
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:    2 GSFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFA 50
            G  AIRR+RDAF SNKN+TD + I+  I EA+ ++ +IKRQ  +SQ++ 
Sbjct:   49 GLHAIRRTRDAFKSNKNITDEASINKFIAEAEWNLEVIKRQAALSQMYG 97
[Close]
BLAST of EMLSAG00000008420 vs. nr
Match: gi|602664799|ref|XP_007438014.1| (PREDICTED: LYR motif-containing protein 4 isoform X1 [Python bivittatus])

HSP 1 Score: 52.7582 bits (125), Expect = 1.572e-7
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAA 51
            ++AIRR RDAF  NKN  + SEI+  I +AK ++ +I RQ TI QL++A
Sbjct:   30 TYAIRRIRDAFRENKNTKESSEINALISKAKTNLEMIHRQVTIGQLYSA 78
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BLAST of EMLSAG00000008420 vs. nr
Match: gi|1126193549|ref|XP_019629821.1| (PREDICTED: LYR motif-containing protein 4-like isoform X1 [Branchiostoma belcheri])

HSP 1 Score: 52.373 bits (124), Expect = 1.642e-7
Identity = 23/47 (48.94%), Postives = 37/47 (78.72%), Query Frame = 0 
Query:    4 FAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFA 50
            +A+RR+RD F +NK++TD ++I   IK+A+DS+ +IKRQ  I QL++
Sbjct:   31 YALRRTRDGFRANKDVTDPAKIQELIKQAEDSLQVIKRQVVIGQLYS 77
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BLAST of EMLSAG00000008420 vs. nr
Match: gi|47209935|emb|CAF94505.1| (unnamed protein product [Tetraodon nigroviridis])

HSP 1 Score: 51.9878 bits (123), Expect = 1.728e-7
Identity = 21/54 (38.89%), Postives = 40/54 (74.07%), Query Frame = 0 
Query:    3 SFAIRRSRDAFVSNKNLTDRSEIDFKIKEAKDSIALIKRQTTISQLFAAPESAL 56
            S+A+RR RDAF +N+ ++D + ++  I E + +++LI+RQ TI Q+FA+ ++ +
Sbjct:   16 SYAVRRVRDAFRTNRTVSDPAAVEKLITEGQQTLSLIQRQVTIGQMFASQKTVV 69
The following BLAST results are available for this feature:
BLAST of EMLSAG00000008420 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 11
Match NameE-valueIdentityDescription
-8.184e-840.00symbol:LYRM4 "Uncharacterized protein" species:903... [more]
-2.632e-737.93symbol:LYRM4 "LYR motif-containing protein 4" spec... [more]
-3.512e-743.75symbol:LYRM4 "LYR motif-containing protein 4" spec... [more]
-7.992e-744.68symbol:Lyrm4 "LYR motif containing 4" species:1009... [more]
-9.905e-745.83symbol:CPAR2_500640 species:5480 "Candida parapsil... [more]
-1.013e-644.68symbol:Lyrm4 "LYR motif containing 4" species:1011... [more]
-1.483e-635.59symbol:bcn92 "Protein bcn92" species:7241 "Drosoph... [more]
-4.025e-532.20symbol:bcn92 "bcn92" species:7227 "Drosophila mela... [more]
-1.029e-443.90symbol:LYRM4 "Uncharacterized protein" species:961... [more]
-1.442e-445.00symbol:LYRM4 "LYR motif-containing protein 4" spec... [more]

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BLAST of EMLSAG00000008420 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000008420 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000084205.386e-38100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s515:11459... [more]
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BLAST of EMLSAG00000008420 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
gi|82182295|sp|Q6DCS1.1|LYRM4_XENLA6.912e-843.14RecName: Full=LYR motif-containing protein 4[more]
gi|122143491|sp|Q0VCG0.1|LYRM4_BOVIN7.213e-837.93RecName: Full=LYR motif-containing protein 4[more]
gi|46576652|sp|Q9HD34.1|LYRM4_HUMAN9.884e-843.75RecName: Full=LYR motif-containing protein 4[more]
gi|226694801|sp|B5FZA8.1|LYRM4_TAEGU1.649e-743.75RecName: Full=LYR motif-containing protein 4[more]
gi|46576605|sp|Q8K215.1|LYRM4_MOUSE2.434e-744.68RecName: Full=LYR motif-containing protein 4[more]
gi|29427423|sp|P82116.1|BCN92_DROSU4.867e-735.59RecName: Full=Protein bcn92[more]
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BLAST of EMLSAG00000008420 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 3
Match NameE-valueIdentityDescription
EAU76964.26.877e-1041.07AGAP004196-PA [Anopheles gambiae str. PEST][more]
EFX87649.11.768e-736.21hypothetical protein DAPPUDRAFT_306461 [Daphnia pu... [more]
EEB16834.11.971e-746.81conserved hypothetical protein [Pediculus humanus ... [more]
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BLAST of EMLSAG00000008420 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|290561795|gb|ADD38295.1|4.003e-33100.00LYR motif-containing protein 4 [Lepeophtheirus sal... [more]
gi|225710316|gb|ACO11004.1|2.955e-1466.67LYR motif-containing protein 4 [Caligus rogercress... [more]
gi|50550525|ref|XP_502735.1|3.138e-1050.00YALI0D12254p [Yarrowia lipolytica] >gi|49648603|em... [more]
gi|975086039|ref|XP_015276647.1|2.475e-949.02PREDICTED: LYR motif-containing protein 4 [Gekko j... [more]
gi|1002574578|ref|XP_015666336.1|4.026e-851.02PREDICTED: LYR motif-containing protein 4 [Protobo... [more]
gi|585665854|ref|XP_006817011.1|4.872e-847.06PREDICTED: LYR motif-containing protein 4-like [Sa... [more]
gi|156385502|ref|XP_001633669.1|1.345e-751.02predicted protein [Nematostella vectensis] >gi|156... [more]
gi|602664799|ref|XP_007438014.1|1.572e-751.02PREDICTED: LYR motif-containing protein 4 isoform ... [more]
gi|1126193549|ref|XP_019629821.1|1.642e-748.94PREDICTED: LYR motif-containing protein 4-like iso... [more]
gi|47209935|emb|CAF94505.1|1.728e-738.89unnamed protein product [Tetraodon nigroviridis][more]

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BLAST of EMLSAG00000008420 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s515supercontigLSalAtl2s515:114591..114857 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s515-processed-gene-1.18
Biotypeprotein_coding
EvidenceIEA
NoteLYR motif-containing protein 4 [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000008420 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000008420EMLSAT00000008420-704267Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s515:114591..114857-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000008420-691186 ID=EMLSAG00000008420-691186|Name=EMLSAG00000008420|organism=Lepeophtheirus salmonis|type=gene|length=267bp|location=Sequence derived from alignment at LSalAtl2s515:114591..114857- (Lepeophtheirus salmonis)
ATGGGGTTTGCACTTGGGATCTTATTTCCCACCTCTGGTTGTAATTATAT
CTTATAATCCTTCCGTCACTTCTTTTATTTCAGATCCTTTGCAATTCGTC
GATCCAGAGATGCCTTTGTATCTAATAAAAATCTAACGGATCGTTCTGAA
ATCGATTTCAAGATAAAGGAAGCCAAAGACTCAATTGCTTTAATTAAAAG
ACAAACAACAATTTCTCAGTTATTCGCGGCTCCTGAATCGGCATTACTCT
CACAAAAACTCATCTAA
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