EMLSAG00000012869, EMLSAG00000012869-695635 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000012869
Unique NameEMLSAG00000012869-695635
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000012869 vs. GO
Match: - (symbol:Tfb5 "TFB5 ortholog (S. cerevisiae)" species:7227 "Drosophila melanogaster" [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0005675 "holo TFIIH complex" evidence=IDA] [GO:0009411 "response to UV" evidence=IDA] [GO:0001111 "promoter clearance from RNA polymerase II promoter" evidence=ISS] [GO:0000990 "core RNA polymerase binding transcription factor activity" evidence=IC] [GO:0000439 "core TFIIH complex" evidence=IDA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=IDA] [GO:0001113 "transcriptional open complex formation at RNA polymerase II promoter" evidence=ISS] [GO:0006289 "nucleotide-excision repair" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] InterPro:IPR009400 Pfam:PF06331 GO:GO:0009411 EMBL:AE014134 GO:GO:0006355 GO:GO:0006366 GO:GO:0006289 GO:GO:0005675 GO:GO:0000439 eggNOG:NOG278168 GeneTree:ENSGT00390000004028 KO:K10845 OMA:KDLDDTH Gene3D:3.30.70.1220 SUPFAM:SSF142897 EMBL:AY071441 RefSeq:NP_001137791.2 UniGene:Dm.5931 SMR:B7Z018 STRING:7227.FBpp0289250 EnsemblMetazoa:FBtr0301130 GeneID:7354403 KEGG:dme:Dmel_CG42373 CTD:7354403 FlyBase:FBgn0265968 GenomeRNAi:7354403 NextBio:20902827 PRO:PR:B7Z018 Uniprot:B7Z018)

HSP 1 Score: 100.138 bits (248), Expect = 2.025e-27
Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPV 68
            MVNV +GVLVECDPAMKQFLL+LDE+  LG +F++QDLD  HLFIS +I+  LQ R+DDLMD+IS P+
Sbjct:    1 MVNVMKGVLVECDPAMKQFLLHLDEKLALGRKFIIQDLDENHLFISTDIVEVLQARVDDLMDRISFPL 68
[Close]
BLAST of EMLSAG00000012869 vs. GO
Match: - (symbol:gtf2h5 "general transcription factor IIH, polypeptide 5" species:7955 "Danio rerio" [GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0000439 "core TFIIH complex" evidence=IEA] InterPro:IPR009400 Pfam:PF06331 ZFIN:ZDB-GENE-041001-144 GO:GO:0006355 GO:GO:0006289 EMBL:AL954831 GO:GO:0000439 CTD:404672 GeneTree:ENSGT00390000004028 HOVERGEN:HBG055393 KO:K10845 OMA:KDLDDTH TreeFam:TF319487 Gene3D:3.30.70.1220 SUPFAM:SSF142897 HOGENOM:HOG000199698 RefSeq:NP_001127834.2 RefSeq:NP_001230077.1 RefSeq:XP_005160654.1 RefSeq:XP_005160655.1 UniGene:Dr.14153 Ensembl:ENSDART00000078535 Ensembl:ENSDART00000141626 Ensembl:ENSDART00000151874 GeneID:751713 KEGG:dre:751713 InParanoid:Q5SNQ6 NextBio:20917856 PRO:PR:Q5SNQ6 Uniprot:Q5SNQ6)

HSP 1 Score: 96.2857 bits (238), Expect = 5.726e-26
Identity = 43/71 (60.56%), Postives = 57/71 (80.28%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MVNV +GVLVECDPAMKQFLLYLDE + LG +F++QDLD TH+FI  E++  LQ+R+ +LMD+ S P+ + 
Sbjct:    1 MVNVLKGVLVECDPAMKQFLLYLDETSALGKKFIIQDLDDTHVFILAEVVQILQERVGELMDQNSFPITQK 71
[Close]
BLAST of EMLSAG00000012869 vs. GO
Match: - (symbol:GTF2H5 "General transcription factor IIH subunit 5" species:9031 "Gallus gallus" [GO:0000439 "core TFIIH complex" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR009400 Pfam:PF06331 GO:GO:0005654 GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0006289 Reactome:REACT_115612 GO:GO:0000439 CTD:404672 eggNOG:NOG278168 GeneTree:ENSGT00390000004028 HOVERGEN:HBG055393 KO:K10845 OMA:KDLDDTH OrthoDB:EOG7BGHPM TreeFam:TF319487 Gene3D:3.30.70.1220 SUPFAM:SSF142897 EMBL:AJ720114 RefSeq:NP_001091004.1 UniGene:Gga.15058 ProteinModelPortal:Q5ZKH0 SMR:Q5ZKH0 STRING:9031.ENSGALP00000022280 Ensembl:ENSGALT00000022319 GeneID:769754 KEGG:gga:769754 HOGENOM:HOG000199698 InParanoid:Q5ZKH0 NextBio:20919981 PRO:PR:Q5ZKH0 Uniprot:Q5ZKH0)

HSP 1 Score: 94.7449 bits (234), Expect = 2.380e-25
Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MVNV +GVL+ECDPAMKQFLLYLDE   LG +F++QDLD TH+F+  E++  LQ+R+ +LMD+ S P+ + 
Sbjct:    1 MVNVLKGVLIECDPAMKQFLLYLDESNALGKKFIIQDLDETHVFVLAELVNFLQERVGELMDQNSFPITQK 71
[Close]
BLAST of EMLSAG00000012869 vs. GO
Match: - (symbol:Gtf2h5 "general transcription factor IIH, polypeptide 5" species:10116 "Rattus norvegicus" [GO:0000182 "rDNA binding" evidence=ISO] [GO:0000439 "core TFIIH complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006289 "nucleotide-excision repair" evidence=IEA;ISO] [GO:0006294 "nucleotide-excision repair, preincision complex assembly" evidence=ISO] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006362 "transcription elongation from RNA polymerase I promoter" evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO] [GO:0071480 "cellular response to gamma radiation" evidence=ISO] InterPro:IPR009400 Pfam:PF06331 RGD:1560991 GO:GO:0006355 GO:GO:0006289 GO:GO:0000439 CTD:404672 GeneTree:ENSGT00390000004028 KO:K10845 OMA:KDLDDTH OrthoDB:EOG7BGHPM TreeFam:TF319487 Gene3D:3.30.70.1220 SUPFAM:SSF142897 EMBL:AABR06002206 EMBL:CH474077 RefSeq:NP_001119560.1 RefSeq:XP_006227956.1 UniGene:Rn.25310 Ensembl:ENSRNOT00000024211 GeneID:502227 KEGG:rno:502227 NextBio:710978 PRO:PR:D3ZEI7 Uniprot:D3ZEI7)

HSP 1 Score: 89.3521 bits (220), Expect = 2.883e-23
Identity = 38/63 (60.32%), Postives = 52/63 (82.54%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDK 63
            MVNV +GVL+ECDPAMKQFLLYLDE   LG +F++QD+D TH+F+  E++  LQ+R+ +LMD+
Sbjct:    1 MVNVLKGVLIECDPAMKQFLLYLDESNALGKKFIIQDIDDTHVFVIAELVNVLQERVGELMDQ 63
[Close]
BLAST of EMLSAG00000012869 vs. GO
Match: - (symbol:GTF2H5 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0000439 "core TFIIH complex" evidence=IEA] [GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR009400 Pfam:PF06331 GO:GO:0006355 GO:GO:0006289 GO:GO:0000439 CTD:404672 GeneTree:ENSGT00390000004028 KO:K10845 OMA:KDLDDTH OrthoDB:EOG7BGHPM TreeFam:TF319487 Gene3D:3.30.70.1220 SUPFAM:SSF142897 EMBL:FP476053 RefSeq:XP_003480269.1 ProteinModelPortal:F2Z5A9 SMR:F2Z5A9 Ensembl:ENSSSCT00000032308 GeneID:100739493 KEGG:ssc:100739493 Uniprot:F2Z5A9)

HSP 1 Score: 89.3521 bits (220), Expect = 2.883e-23
Identity = 38/63 (60.32%), Postives = 52/63 (82.54%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDK 63
            MVNV +GVL+ECDPAMKQFLLYLDE   LG +F++QD+D TH+F+  E++  LQ+R+ +LMD+
Sbjct:    1 MVNVLKGVLIECDPAMKQFLLYLDESNALGKKFIIQDIDDTHVFVIAELVNVLQERVGELMDQ 63
[Close]
BLAST of EMLSAG00000012869 vs. GO
Match: - (symbol:GTF2H5 "General transcription factor IIH subunit 5" species:9606 "Homo sapiens" [GO:0000439 "core TFIIH complex" evidence=IEA] [GO:0006289 "nucleotide-excision repair" evidence=IMP] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR009400 Pfam:PF06331 GO:GO:0006355 GO:GO:0006351 GO:GO:0006289 MIM:601675 Orphanet:33364 GO:GO:0000439 EMBL:AL590703 CTD:404672 eggNOG:NOG278168 HOVERGEN:HBG055393 KO:K10845 OMA:KDLDDTH OrthoDB:EOG7BGHPM TreeFam:TF319487 Gene3D:3.30.70.1220 SUPFAM:SSF142897 EMBL:AJ634743 EMBL:BC056906 EMBL:BC060317 RefSeq:NP_997001.1 UniGene:Hs.356224 PDB:1YDL PDB:2JNJ PDBsum:1YDL PDBsum:2JNJ ProteinModelPortal:Q6ZYL4 SMR:Q6ZYL4 BioGrid:135676 DIP:DIP-29188N IntAct:Q6ZYL4 STRING:9606.ENSP00000356067 PhosphoSite:Q6ZYL4 DMDM:67462047 PaxDb:Q6ZYL4 PRIDE:Q6ZYL4 DNASU:404672 Ensembl:ENST00000607778 GeneID:404672 KEGG:hsa:404672 UCSC:uc003qrd.3 GeneCards:GC06P158509 HGNC:HGNC:21157 HPA:CAB037029 HPA:CAB037042 MIM:608780 neXtProt:NX_Q6ZYL4 PharmGKB:PA134962077 InParanoid:Q6ZYL4 PhylomeDB:Q6ZYL4 EvolutionaryTrace:Q6ZYL4 GeneWiki:GTF2H5 GenomeRNAi:404672 NextBio:107889 PRO:PR:Q6ZYL4 Bgee:Q6ZYL4 CleanEx:HS_GTF2H5 Genevestigator:Q6ZYL4 Uniprot:Q6ZYL4)

HSP 1 Score: 89.3521 bits (220), Expect = 2.883e-23
Identity = 38/63 (60.32%), Postives = 52/63 (82.54%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDK 63
            MVNV +GVL+ECDPAMKQFLLYLDE   LG +F++QD+D TH+F+  E++  LQ+R+ +LMD+
Sbjct:    1 MVNVLKGVLIECDPAMKQFLLYLDESNALGKKFIIQDIDDTHVFVIAELVNVLQERVGELMDQ 63
[Close]
BLAST of EMLSAG00000012869 vs. GO
Match: - (symbol:GTF2H5 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000439 "core TFIIH complex" evidence=IEA] [GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR009400 Pfam:PF06331 GO:GO:0006355 GO:GO:0006289 GO:GO:0000439 CTD:404672 GeneTree:ENSGT00390000004028 KO:K10845 OMA:KDLDDTH OrthoDB:EOG7BGHPM TreeFam:TF319487 Gene3D:3.30.70.1220 SUPFAM:SSF142897 EMBL:AAEX03000308 RefSeq:XP_005615600.1 RefSeq:XP_855012.1 ProteinModelPortal:E2RRJ1 SMR:E2RRJ1 Ensembl:ENSCAFT00000047461 GeneID:612182 KEGG:cfa:612182 NextBio:20897715 Uniprot:E2RRJ1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.883e-23
Identity = 38/63 (60.32%), Postives = 52/63 (82.54%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDK 63
            MVNV +GVL+ECDPAMKQFLLYLDE   LG +F++QD+D TH+F+  E++  LQ+R+ +LMD+
Sbjct:    1 MVNVLKGVLIECDPAMKQFLLYLDESNALGKKFIIQDIDDTHVFVIAELVNVLQERVGELMDQ 63
[Close]
BLAST of EMLSAG00000012869 vs. GO
Match: - (symbol:GTF2H5 "General transcription factor IIH subunit 5" species:9913 "Bos taurus" [GO:0000439 "core TFIIH complex" evidence=IEA] [GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR009400 Pfam:PF06331 GO:GO:0006355 GO:GO:0006351 GO:GO:0006289 GO:GO:0000439 EMBL:BC111195 RefSeq:NP_001035627.1 UniGene:Bt.21230 ProteinModelPortal:Q2T9Z5 SMR:Q2T9Z5 STRING:9913.ENSBTAP00000011263 Ensembl:ENSBTAT00000011263 GeneID:518046 KEGG:bta:518046 CTD:404672 eggNOG:NOG278168 GeneTree:ENSGT00390000004028 HOVERGEN:HBG055393 InParanoid:Q2T9Z5 KO:K10845 OMA:KDLDDTH OrthoDB:EOG7BGHPM TreeFam:TF319487 NextBio:20872570 Gene3D:3.30.70.1220 SUPFAM:SSF142897 Uniprot:Q2T9Z5)

HSP 1 Score: 89.3521 bits (220), Expect = 2.883e-23
Identity = 38/63 (60.32%), Postives = 52/63 (82.54%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDK 63
            MVNV +GVL+ECDPAMKQFLLYLDE   LG +F++QD+D TH+F+  E++  LQ+R+ +LMD+
Sbjct:    1 MVNVLKGVLIECDPAMKQFLLYLDESNALGKKFIIQDIDDTHVFVIAELVNVLQERVGELMDQ 63
[Close]
BLAST of EMLSAG00000012869 vs. GO
Match: - (symbol:Gtf2h5 "general transcription factor IIH, polypeptide 5" species:10090 "Mus musculus" [GO:0000182 "rDNA binding" evidence=IDA] [GO:0000439 "core TFIIH complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006289 "nucleotide-excision repair" evidence=ISO;IMP] [GO:0006294 "nucleotide-excision repair, preincision complex assembly" evidence=IMP] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006362 "transcription elongation from RNA polymerase I promoter" evidence=IMP;IDA] [GO:0006364 "rRNA processing" evidence=IMP] [GO:0006974 "cellular response to DNA damage stimulus" evidence=IEA] [GO:0071480 "cellular response to gamma radiation" evidence=IMP] InterPro:IPR009400 Pfam:PF06331 MGI:MGI:107227 GO:GO:0005730 GO:GO:0006355 GO:GO:0071480 GO:GO:0006364 GO:GO:0006362 GO:GO:0000182 GO:GO:0006294 GO:GO:0000439 CTD:404672 eggNOG:NOG278168 GeneTree:ENSGT00390000004028 HOVERGEN:HBG055393 KO:K10845 OMA:KDLDDTH OrthoDB:EOG7BGHPM TreeFam:TF319487 Gene3D:3.30.70.1220 SUPFAM:SSF142897 HOGENOM:HOG000199698 EMBL:AK003547 EMBL:AK003579 EMBL:AK011281 EMBL:AK012257 EMBL:AK013225 EMBL:BC029238 RefSeq:NP_852057.2 RefSeq:XP_006523302.1 RefSeq:XP_006523303.1 UniGene:Mm.303441 ProteinModelPortal:Q8K2X8 SMR:Q8K2X8 PhosphoSite:Q8K2X8 PRIDE:Q8K2X8 Ensembl:ENSMUST00000039487 Ensembl:ENSMUST00000100955 GeneID:66467 KEGG:mmu:66467 UCSC:uc008aga.2 InParanoid:Q8K2X8 ChiTaRS:GTF2H5 NextBio:321774 PRO:PR:Q8K2X8 Bgee:Q8K2X8 CleanEx:MM_GTF2H5 Genevestigator:Q8K2X8 Uniprot:Q8K2X8)

HSP 1 Score: 88.9669 bits (219), Expect = 3.538e-23
Identity = 38/63 (60.32%), Postives = 52/63 (82.54%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDK 63
            MVNV +GVL+ECDPAMKQFLLYLDE   LG +F++QD+D TH+F+  E++  LQ+R+ +LMD+
Sbjct:    1 MVNVLKGVLIECDPAMKQFLLYLDEANALGKKFIIQDIDDTHVFVIAELVNVLQERVGELMDQ 63
[Close]
BLAST of EMLSAG00000012869 vs. GO
Match: - (symbol:CELE_Y55B1AL.2 "Protein Y55B1AL.2" species:6239 "Caenorhabditis elegans" [GO:0000439 "core TFIIH complex" evidence=IEA] [GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] InterPro:IPR009400 Pfam:PF06331 GO:GO:0006355 GO:GO:0006289 GO:GO:0000439 eggNOG:NOG278168 GeneTree:ENSGT00390000004028 KO:K10845 OrthoDB:EOG7BGHPM Gene3D:3.30.70.1220 SUPFAM:SSF142897 HOGENOM:HOG000199698 EMBL:FO080183 RefSeq:NP_497212.1 UniGene:Cel.28297 ProteinModelPortal:Q9N390 SMR:Q9N390 DIP:DIP-26454N MINT:MINT-1064952 STRING:6239.Y55B1AL.2 PaxDb:Q9N390 PRIDE:Q9N390 EnsemblMetazoa:Y55B1AL.2 GeneID:190298 KEGG:cel:CELE_Y55B1AL.2 UCSC:Y55B1AL.2 CTD:190298 WormBase:Y55B1AL.2 InParanoid:Q9N390 OMA:VEQIMEN NextBio:945296 PRO:PR:Q9N390 Uniprot:Q9N390)

HSP 1 Score: 75.8702 bits (185), Expect = 4.807e-18
Identity = 31/65 (47.69%), Postives = 52/65 (80.00%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKIS 65
            MVNV +GVLV  DPA +Q L++LD+  +LG++F+V++LD THLFI  EI+P L+++++ +M+ ++
Sbjct:    1 MVNVKKGVLVTSDPAFRQLLIHLDDSRQLGSKFIVRELDDTHLFIEKEIVPMLENKVEQIMENMN 65
[Close]
BLAST of EMLSAG00000012869 vs. C. finmarchicus
Match: gi|592831278|gb|GAXK01126266.1| (TSA: Calanus finmarchicus comp46193_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 109.383 bits (272), Expect = 3.795e-31
Identity = 48/71 (67.61%), Postives = 64/71 (90.14%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MVNVT+G++VECDPAMKQFLL+LDE+  LG++F++QDLD THLFI+PE+L  L+ +ID+LMDKISVP++E 
Sbjct:   39 MVNVTKGIMVECDPAMKQFLLHLDEKFILGSKFIIQDLDETHLFIAPEVLDMLKSQIDELMDKISVPLVEG 251
[Close]
BLAST of EMLSAG00000012869 vs. C. finmarchicus
Match: gi|592952494|gb|GAXK01006059.1| (TSA: Calanus finmarchicus comp69058_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 5.732e-1
Identity = 14/31 (45.16%), Postives = 18/31 (58.06%), Query Frame = 0 
Query:   22 YLDERAELGTRFVVQDLDATHLFISPEILPK 52
            +L E+     RF   DLD+ H  ISP ILP+
Sbjct:  763 FLSEKIRNRIRFHGSDLDSLHRAISPSILPR 855
[Close]
BLAST of EMLSAG00000012869 vs. C. finmarchicus
Match: gi|592782951|gb|GAXK01171617.1| (TSA: Calanus finmarchicus comp62124_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 6.509e-1
Identity = 15/28 (53.57%), Postives = 21/28 (75.00%), Query Frame = 0 
Query:   38 LDATHLFISPEILPKLQDRIDDLMDKIS 65
            L  + LF SP+ + KL+DRI DLM++IS
Sbjct: 1384 LHYSELF-SPQFVAKLEDRIADLMEEIS 1464
[Close]
BLAST of EMLSAG00000012869 vs. L. salmonis peptides
Match: EMLSAP00000012869 (pep:novel supercontig:LSalAtl2s:LSalAtl2s97:2846337:2848036:1 gene:EMLSAG00000012869 transcript:EMLSAT00000012869 description:"augustus_masked-LSalAtl2s97-processed-gene-28.3")

HSP 1 Score: 144.05 bits (362), Expect = 2.974e-46
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES
Sbjct:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
[Close]
BLAST of EMLSAG00000012869 vs. SwissProt
Match: gi|67462032|sp|Q5ZKH0.1|TF2H5_CHICK (RecName: Full=General transcription factor IIH subunit 5; AltName: Full=General transcription factor IIH polypeptide 5; AltName: Full=TFB5 ortholog; AltName: Full=TFIIH basal transcription factor complex TTD-A subunit)

HSP 1 Score: 94.7449 bits (234), Expect = 1.341e-26
Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MVNV +GVL+ECDPAMKQFLLYLDE   LG +F++QDLD TH+F+  E++  LQ+R+ +LMD+ S P+ + 
Sbjct:    1 MVNVLKGVLIECDPAMKQFLLYLDESNALGKKFIIQDLDETHVFVLAELVNFLQERVGELMDQNSFPITQK 71
[Close]
BLAST of EMLSAG00000012869 vs. SwissProt
Match: gi|67462047|sp|Q6ZYL4.1|TF2H5_HUMAN (RecName: Full=General transcription factor IIH subunit 5; AltName: Full=General transcription factor IIH polypeptide 5; AltName: Full=TFB5 ortholog; AltName: Full=TFIIH basal transcription factor complex TTD-A subunit >gi|122137012|sp|Q2T9Z5.1|TF2H5_BOVIN RecName: Full=General transcription factor IIH subunit 5; AltName: Full=General transcription factor IIH polypeptide 5)

HSP 1 Score: 89.3521 bits (220), Expect = 1.769e-24
Identity = 38/63 (60.32%), Postives = 52/63 (82.54%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDK 63
            MVNV +GVL+ECDPAMKQFLLYLDE   LG +F++QD+D TH+F+  E++  LQ+R+ +LMD+
Sbjct:    1 MVNVLKGVLIECDPAMKQFLLYLDESNALGKKFIIQDIDDTHVFVIAELVNVLQERVGELMDQ 63
[Close]
BLAST of EMLSAG00000012869 vs. SwissProt
Match: gi|67462069|sp|Q8K2X8.1|TF2H5_MOUSE (RecName: Full=General transcription factor IIH subunit 5; AltName: Full=General transcription factor IIH polypeptide 5; AltName: Full=TFB5 ortholog; AltName: Full=TFIIH basal transcription factor complex TTD-A subunit)

HSP 1 Score: 88.9669 bits (219), Expect = 2.179e-24
Identity = 38/63 (60.32%), Postives = 52/63 (82.54%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDK 63
            MVNV +GVL+ECDPAMKQFLLYLDE   LG +F++QD+D TH+F+  E++  LQ+R+ +LMD+
Sbjct:    1 MVNVLKGVLIECDPAMKQFLLYLDEANALGKKFIIQDIDDTHVFVIAELVNVLQERVGELMDQ 63
[Close]
BLAST of EMLSAG00000012869 vs. SwissProt
Match: gi|75127100|sp|Q6NNM0.1|TFB5_ARATH (RecName: Full=RNA polymerase II transcription factor B subunit 5; AltName: Full=General transcription and DNA repair factor IIH subunit TFB5; Short=AtTFB5; Short=TFIIH subunit TFB5)

HSP 1 Score: 54.6842 bits (130), Expect = 9.955e-11
Identity = 23/65 (35.38%), Postives = 37/65 (56.92%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKIS 65
            MVN  +GV V CD  M QF++ ++       +F++  LD+THLF+ P +   ++  I D  D+ S
Sbjct:    1 MVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDFRDQNS 65
[Close]
BLAST of EMLSAG00000012869 vs. SwissProt
Match: gi|928505966|sp|Q4P985.3|TFB5_USTMA (RecName: Full=RNA polymerase II transcription factor B subunit 5; AltName: Full=General transcription and DNA repair factor IIH subunit 5; Short=TFIIH subunit 5)

HSP 1 Score: 51.9878 bits (123), Expect = 9.161e-10
Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 0 
Query:    6 RGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPV 68
            +G+L+ CD A+KQ +L LDER     RF++ DLD THL ISP       DRID L  ++ V +
Sbjct:    5 KGMLLTCDAAVKQLILSLDER----NRFIIMDLDETHLLISP-------DRIDWLRAELEVEL 56
[Close]
BLAST of EMLSAG00000012869 vs. SwissProt
Match: gi|74858501|sp|Q55CT8.1|TF2H5_DICDI (RecName: Full=General transcription factor IIH subunit 5; AltName: Full=TFIIH basal transcription factor complex subunit 5)

HSP 1 Score: 49.6766 bits (117), Expect = 8.676e-9
Identity = 27/74 (36.49%), Postives = 44/74 (59.46%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFIS---PEILPKLQDRIDDLMDKISVPVIES 71
            MV+V +G+ +ECDP  KQF+ Y+ ++      F V  LD THLF+     +++  +Q RIDDL ++ +  V + 
Sbjct:    1 MVHVYKGLFLECDPPTKQFVEYISKQE----HFEVIVLDETHLFLQGGDEKVINSIQRRIDDLQNQNTYSVFDK 70
[Close]
BLAST of EMLSAG00000012869 vs. SwissProt
Match: gi|74632496|sp|Q6C1B5.1|TFB5_YARLI (RecName: Full=RNA polymerase II transcription factor B subunit 5; AltName: Full=General transcription and DNA repair factor IIH subunit 5; Short=TFIIH subunit 5)

HSP 1 Score: 45.0542 bits (105), Expect = 5.960e-7
Identity = 19/61 (31.15%), Postives = 37/61 (60.66%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLM 61
            M   TRGVL+ECDP++K  ++ +D         ++ +LD THL I P ++  ++ +++ ++
Sbjct:    1 MPKATRGVLIECDPSIKALIVNIDSSQH---NIILDELDDTHLMIHPSMVEVVKQKLNKML 58
[Close]
BLAST of EMLSAG00000012869 vs. Select Arthropod Genomes
Match: ACL82997.2 (transcription factor B5 [Drosophila melanogaster])

HSP 1 Score: 100.138 bits (248), Expect = 5.136e-29
Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPV 68
            MVNV +GVLVECDPAMKQFLL+LDE+  LG +F++QDLD  HLFIS +I+  LQ R+DDLMD+IS P+
Sbjct:    1 MVNVMKGVLVECDPAMKQFLLHLDEKLALGRKFIIQDLDENHLFISTDIVEVLQARVDDLMDRISFPL 68
[Close]
BLAST of EMLSAG00000012869 vs. Select Arthropod Genomes
Match: XP_391822.2 (PREDICTED: general transcription factor IIH subunit 5 [Apis mellifera])

HSP 1 Score: 99.7525 bits (247), Expect = 5.923e-29
Identity = 46/71 (64.79%), Postives = 57/71 (80.28%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MVNVT+G+LVECD AMKQFLL+LDE   LG +F++QDLD  HLFIS +IL  LQ ++DDLMD+IS P+ E 
Sbjct:    1 MVNVTKGILVECDAAMKQFLLHLDETFALGRKFIIQDLDERHLFISADILDTLQTKVDDLMDQISFPLAEK 71
[Close]
BLAST of EMLSAG00000012869 vs. Select Arthropod Genomes
Match: gb|EEC13235.1| (general transcription factor IIE (TFIIE) subunit, putative [Ixodes scapularis])

HSP 1 Score: 97.8265 bits (242), Expect = 4.514e-28
Identity = 43/71 (60.56%), Postives = 59/71 (83.10%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MV+V +G+LVECDPAMKQFLL+LD+   LG +F++QDLD TH+FI+ +IL  LQ++IDD+MD+IS P+ E 
Sbjct:    1 MVHVMKGILVECDPAMKQFLLHLDDTNALGRKFIIQDLDETHVFITADILDTLQNKIDDIMDQISFPLAEK 71
[Close]
BLAST of EMLSAG00000012869 vs. Select Arthropod Genomes
Match: EEB13981.1 (TFIIH basal transcription factor complex TTD-A subunit, putative [Pediculus humanus corporis])

HSP 1 Score: 97.4413 bits (241), Expect = 5.874e-28
Identity = 46/71 (64.79%), Postives = 57/71 (80.28%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MV+V +GVLVECD AMKQFLL+LDE   LG +F++QDLD THLFIS +IL  LQ ++DDL+D+IS PV E 
Sbjct:    1 MVHVMKGVLVECDQAMKQFLLHLDETLALGKKFIIQDLDDTHLFISSDILYILQTKVDDLIDQISAPVTEK 71
[Close]
BLAST of EMLSAG00000012869 vs. Select Arthropod Genomes
Match: gb|KPM00429.1| (general transcription factor IIH subunit 5-like protein, partial [Sarcoptes scabiei])

HSP 1 Score: 88.1965 bits (217), Expect = 6.210e-24
Identity = 43/65 (66.15%), Postives = 51/65 (78.46%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKIS 65
            MV V  G+LV CDPAMKQFLL+LD+   LG RFV+QDLD THL IS +IL  L+ +IDDLMD+IS
Sbjct:   34 MVQVQNGILVTCDPAMKQFLLHLDDTKALGQRFVLQDLDPTHLLISSDILEVLKAKIDDLMDQIS 98
[Close]
BLAST of EMLSAG00000012869 vs. Select Arthropod Genomes
Match: EFX70423.1 (hypothetical protein DAPPUDRAFT_328340 [Daphnia pulex])

HSP 1 Score: 73.9442 bits (180), Expect = 1.285e-18
Identity = 38/71 (53.52%), Postives = 48/71 (67.61%), Query Frame = 0 
Query:    1 MVNVTRGVLVEC-DPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIE 70
            MVN T GVLVEC D AMKQ LL+LDE+     +F++ DLD TH+FI+ + L  LQ  ID  MD +S P+ E
Sbjct:    1 MVNATEGVLVECADAAMKQLLLHLDEKLPPDKKFILHDLDETHVFIASKHLEFLQSEIDCFMDSVSFPLAE 71
[Close]
BLAST of EMLSAG00000012869 vs. nr
Match: gi|225714502|gb|ACO13097.1| (General transcription factor IIH subunit 5 [Lepeophtheirus salmonis])

HSP 1 Score: 144.05 bits (362), Expect = 8.641e-44
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES
Sbjct:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
[Close]
BLAST of EMLSAG00000012869 vs. nr
Match: gi|225718492|gb|ACO15092.1| (General transcription factor IIH subunit 5 [Caligus clemensi] >gi|225719128|gb|ACO15410.1| General transcription factor IIH subunit 5 [Caligus clemensi])

HSP 1 Score: 131.724 bits (330), Expect = 7.726e-39
Identity = 62/71 (87.32%), Postives = 68/71 (95.77%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MVN TRGVLVECDPAMKQFLLYLDE+ +LG+RFVVQDLD+ HLFISPEILPKLQDRIDDLMDKISVPV+E+
Sbjct:    1 MVNATRGVLVECDPAMKQFLLYLDEKEQLGSRFVVQDLDSRHLFISPEILPKLQDRIDDLMDKISVPVVEN 71
[Close]
BLAST of EMLSAG00000012869 vs. nr
Match: gi|225710384|gb|ACO11038.1| (General transcription factor IIH subunit 5 [Caligus rogercresseyi] >gi|225710996|gb|ACO11344.1| General transcription factor IIH subunit 5 [Caligus rogercresseyi])

HSP 1 Score: 127.487 bits (319), Expect = 3.649e-37
Identity = 60/71 (84.51%), Postives = 65/71 (91.55%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MVN TRGVLV CDPAMKQFLLYLDE+ ELG+RFVV+DLD  HLFISPEILPKLQDRIDDLMDK SVPV+E+
Sbjct:    1 MVNATRGVLVNCDPAMKQFLLYLDEKEELGSRFVVKDLDPNHLFISPEILPKLQDRIDDLMDKFSVPVVEN 71
[Close]
BLAST of EMLSAG00000012869 vs. nr
Match: gi|225709208|gb|ACO10450.1| (General transcription factor IIH subunit 5 [Caligus rogercresseyi])

HSP 1 Score: 125.561 bits (314), Expect = 1.854e-36
Identity = 59/71 (83.10%), Postives = 64/71 (90.14%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MVN TRGVLV CDPAMKQFLLYLDE+ ELG+RFVV+DLD  HLFISPEILPKLQDRIDDLMDK SVP +E+
Sbjct:    1 MVNATRGVLVNCDPAMKQFLLYLDEKEELGSRFVVKDLDPNHLFISPEILPKLQDRIDDLMDKFSVPFVEN 71
[Close]
BLAST of EMLSAG00000012869 vs. nr
Match: gi|225709316|gb|ACO10504.1| (General transcription factor IIH subunit 5 [Caligus rogercresseyi])

HSP 1 Score: 124.02 bits (310), Expect = 6.699e-36
Identity = 59/71 (83.10%), Postives = 64/71 (90.14%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MVN TRGVLV CDPAMKQ LLYLDE+ ELG+RFVV+DLD  HLFISPEILPKLQDRIDDLMDK SVPV+E+
Sbjct:    1 MVNATRGVLVNCDPAMKQSLLYLDEKEELGSRFVVKDLDPNHLFISPEILPKLQDRIDDLMDKFSVPVVEN 71
[Close]
BLAST of EMLSAG00000012869 vs. nr
Match: gi|676473560|ref|XP_009059858.1| (hypothetical protein LOTGIDRAFT_125133 [Lottia gigantea] >gi|556100846|gb|ESO89498.1| hypothetical protein LOTGIDRAFT_125133 [Lottia gigantea])

HSP 1 Score: 107.457 bits (267), Expect = 2.724e-29
Identity = 51/71 (71.83%), Postives = 60/71 (84.51%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MVNVT+GVLVECDPAMKQFLL+LDE+  LG +FV+QDLD THLFIS +I+  LQ RIDDLMDK+S P+ E 
Sbjct:    1 MVNVTKGVLVECDPAMKQFLLHLDEKNALGRKFVIQDLDDTHLFISSDIIEILQTRIDDLMDKLSFPLAEK 71
[Close]
BLAST of EMLSAG00000012869 vs. nr
Match: gi|1101400575|ref|XP_018911375.1| (PREDICTED: general transcription factor IIH subunit 5 [Bemisia tabaci])

HSP 1 Score: 102.834 bits (255), Expect = 1.765e-27
Identity = 47/71 (66.20%), Postives = 59/71 (83.10%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MVNV +G+L+ECD AMKQFLL+LDE + LG +F++QDLD THLFIS +IL  LQ RIDDLMD+IS P++E 
Sbjct:    1 MVNVMKGILIECDLAMKQFLLHLDETSALGRKFIIQDLDDTHLFISADILETLQARIDDLMDQISFPLVEK 71
[Close]
BLAST of EMLSAG00000012869 vs. nr
Match: gi|906462192|gb|KNC24525.1| (hypothetical protein FF38_08902 [Lucilia cuprina])

HSP 1 Score: 102.834 bits (255), Expect = 1.784e-27
Identity = 47/70 (67.14%), Postives = 59/70 (84.29%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIE 70
            MVNV +GVLVECDPAMKQFLL+LDE + LG +F++QDLD +HLFIS EI+  LQ R+D+LMD+IS P+ E
Sbjct:    1 MVNVMKGVLVECDPAMKQFLLHLDETSALGRKFIIQDLDESHLFISTEIVETLQARVDELMDRISFPLHE 70
[Close]
BLAST of EMLSAG00000012869 vs. nr
Match: gi|1059379819|ref|XP_017777570.1| (PREDICTED: general transcription factor IIH subunit 5 [Nicrophorus vespilloides])

HSP 1 Score: 102.834 bits (255), Expect = 2.284e-27
Identity = 46/71 (64.79%), Postives = 60/71 (84.51%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MVNV +G+LV+CDPAMKQFLL+LDE  +LG +F++QDLD +HLFIS +IL  LQ +IDDLMD+IS P++E 
Sbjct:    1 MVNVMKGILVKCDPAMKQFLLHLDETIKLGRKFIIQDLDESHLFISSDILDTLQAKIDDLMDQISFPIMEK 71
[Close]
BLAST of EMLSAG00000012869 vs. nr
Match: gi|642931912|ref|XP_008196778.1| (PREDICTED: general transcription factor IIH subunit 5 [Tribolium castaneum])

HSP 1 Score: 102.449 bits (254), Expect = 3.192e-27
Identity = 48/71 (67.61%), Postives = 56/71 (78.87%), Query Frame = 0 
Query:    1 MVNVTRGVLVECDPAMKQFLLYLDERAELGTRFVVQDLDATHLFISPEILPKLQDRIDDLMDKISVPVIES 71
            MVNV +GVLV CD AMKQFLLYLDE  +LG +F++QDLD  HLFIS +IL  LQ +IDDLMD+IS PV E 
Sbjct:    1 MVNVMKGVLVTCDQAMKQFLLYLDETTKLGRKFIIQDLDENHLFISADILETLQAKIDDLMDQISFPVAEK 71
The following BLAST results are available for this feature:
BLAST of EMLSAG00000012869 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 22
Match NameE-valueIdentityDescription
-2.025e-2767.65symbol:Tfb5 "TFB5 ortholog (S. cerevisiae)" specie... [more]
-5.726e-2660.56symbol:gtf2h5 "general transcription factor IIH, p... [more]
-2.380e-2557.75symbol:GTF2H5 "General transcription factor IIH su... [more]
-2.883e-2360.32symbol:Gtf2h5 "general transcription factor IIH, p... [more]
-2.883e-2360.32symbol:GTF2H5 "Uncharacterized protein" species:98... [more]
-2.883e-2360.32symbol:GTF2H5 "General transcription factor IIH su... [more]
-2.883e-2360.32symbol:GTF2H5 "Uncharacterized protein" species:96... [more]
-2.883e-2360.32symbol:GTF2H5 "General transcription factor IIH su... [more]
-3.538e-2360.32symbol:Gtf2h5 "general transcription factor IIH, p... [more]
-4.807e-1847.69symbol:CELE_Y55B1AL.2 "Protein Y55B1AL.2" species:... [more]

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BLAST of EMLSAG00000012869 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 3
Match NameE-valueIdentityDescription
gi|592831278|gb|GAXK01126266.1|3.795e-3167.61TSA: Calanus finmarchicus comp46193_c0_seq1 transc... [more]
gi|592952494|gb|GAXK01006059.1|5.732e-145.16TSA: Calanus finmarchicus comp69058_c0_seq1 transc... [more]
gi|592782951|gb|GAXK01171617.1|6.509e-153.57TSA: Calanus finmarchicus comp62124_c1_seq1 transc... [more]
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BLAST of EMLSAG00000012869 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000128692.974e-46100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s97:284633... [more]
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BLAST of EMLSAG00000012869 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
gi|67462032|sp|Q5ZKH0.1|TF2H5_CHICK1.341e-2657.75RecName: Full=General transcription factor IIH sub... [more]
gi|67462047|sp|Q6ZYL4.1|TF2H5_HUMAN1.769e-2460.32RecName: Full=General transcription factor IIH sub... [more]
gi|67462069|sp|Q8K2X8.1|TF2H5_MOUSE2.179e-2460.32RecName: Full=General transcription factor IIH sub... [more]
gi|75127100|sp|Q6NNM0.1|TFB5_ARATH9.955e-1135.38RecName: Full=RNA polymerase II transcription fact... [more]
gi|928505966|sp|Q4P985.3|TFB5_USTMA9.161e-1046.03RecName: Full=RNA polymerase II transcription fact... [more]
gi|74858501|sp|Q55CT8.1|TF2H5_DICDI8.676e-936.49RecName: Full=General transcription factor IIH sub... [more]
gi|74632496|sp|Q6C1B5.1|TFB5_YARLI5.960e-731.15RecName: Full=RNA polymerase II transcription fact... [more]
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BLAST of EMLSAG00000012869 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 6
Match NameE-valueIdentityDescription
ACL82997.25.136e-2967.65transcription factor B5 [Drosophila melanogaster][more]
XP_391822.25.923e-2964.79PREDICTED: general transcription factor IIH subuni... [more]
gb|EEC13235.1|4.514e-2860.56general transcription factor IIE (TFIIE) subunit, ... [more]
EEB13981.15.874e-2864.79TFIIH basal transcription factor complex TTD-A sub... [more]
gb|KPM00429.1|6.210e-2466.15general transcription factor IIH subunit 5-like pr... [more]
EFX70423.11.285e-1853.52hypothetical protein DAPPUDRAFT_328340 [Daphnia pu... [more]
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BLAST of EMLSAG00000012869 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|225714502|gb|ACO13097.1|8.641e-44100.00General transcription factor IIH subunit 5 [Lepeop... [more]
gi|225718492|gb|ACO15092.1|7.726e-3987.32General transcription factor IIH subunit 5 [Caligu... [more]
gi|225710384|gb|ACO11038.1|3.649e-3784.51General transcription factor IIH subunit 5 [Caligu... [more]
gi|225709208|gb|ACO10450.1|1.854e-3683.10General transcription factor IIH subunit 5 [Caligu... [more]
gi|225709316|gb|ACO10504.1|6.699e-3683.10General transcription factor IIH subunit 5 [Caligu... [more]
gi|676473560|ref|XP_009059858.1|2.724e-2971.83hypothetical protein LOTGIDRAFT_125133 [Lottia gig... [more]
gi|1101400575|ref|XP_018911375.1|1.765e-2766.20PREDICTED: general transcription factor IIH subuni... [more]
gi|906462192|gb|KNC24525.1|1.784e-2767.14hypothetical protein FF38_08902 [Lucilia cuprina][more]
gi|1059379819|ref|XP_017777570.1|2.284e-2764.79PREDICTED: general transcription factor IIH subuni... [more]
gi|642931912|ref|XP_008196778.1|3.192e-2767.61PREDICTED: general transcription factor IIH subuni... [more]

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BLAST of EMLSAG00000012869 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s97supercontigLSalAtl2s97:2846337..2848036 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s97-processed-gene-28.3
Biotypeprotein_coding
EvidenceIEA
NoteGeneral transcription factor IIH subunit 5
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000012869 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000012869EMLSAT00000012869-708716Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s97:2846337..2848036+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000012869-695635 ID=EMLSAG00000012869-695635|Name=EMLSAG00000012869|organism=Lepeophtheirus salmonis|type=gene|length=1700bp|location=Sequence derived from alignment at LSalAtl2s97:2846337..2848036+ (Lepeophtheirus salmonis)
GATTTATTGAACTGGAATTTATAATAATGACGTAATAGGATTCTTTCAAT
GTAGAGAGGTTGAAAGACTCAAAATGTGTCCTACAGTGACGTATTTTTAG
GCCTATTATGTTTGCTATGTCCCAGCCCGGGAATACTATACAAGTTTGTA
GTTTTTGTATTCCTTGTCTCAGTATAGAGTTAGAAATAAAAATATATTCA
TATTGTGATATGGTCTATGGAATACGAAGACTGTTCCATTATTTTCAGCT
GTTAACTTTGTAATGCTAATGAGATATAATTTAGCCGAAATAGCCATAAA
TTTAATAAGCTAGTTTTTTTTTGCCGGATTTTAATATAATATCTACTAGA
AAACCAAAGACAATAGCTGCATTAAACATATATGGAACAAAATATTTATT
CTAAACTGCCTACAAAAGCCAACCAGCCAAGTAGAAATCCTTGTCGCCTC
TATATTTACTTTTTCTGTTGACACTAGCTGTATATTAACATTAAATCATT
ACGTCACGTGAGTTATTAATTATTATTTTTTTTTACTGATTGCGAATATT
TAATATTTATTCTTAAAGGCCAAGTAATTGAAATCATCCTATGAGACTCT
GGTGGTGGTCTTTACTTTATCGATATTTTTAATCCTGGTTATGGTGAATG
TGACCCGAGGTGTGCTGGTGGAGTGTGACCCTGCTATGAAACAGTTTTTA
CTTTATCTGGACGAAAGAGCTGAACTAGGAACTCGTTTTGTTGTTCAAGA
CTTGGACGCCACACATCTTTTCATTTCCCCTGAAATCCTCCCTAAGCTTC
AGGACCGTATTGATGATTTAATGGATAAGATCTCTGTACCCGTTATTGAA
AGTTAGATCATCTTTAATAATCATGCTACGAAGAGAACCCACTCGGATTG
AATCCGATTTGACGGATATCATTGAATTTGAGGAACATATTAAAAAAGAA
GCTAAAAAGAAAGAGGCCGCCCTGGGTCATCCTGCACCACAAGACATTGA
GGTTGATATTCAACTCACAAGAGAAGAAAGACTCAATGCTAGAATAGGAT
ATCATCCCTCACCCAAAAATCCATCCTAAGAACCTCTCTGATTTTTCTAC
AGATCTTTTCATTTTACCATTTACATAAATATATGATTCCTAACTACAAT
ACAATTAAAAATGTTTTCAATTGAATTGACCCTCAAATCATTTCCACCAA
TAAATACATAAACGAATCCAATTTTTTTTATTTTTTTTTGGAGTTGCCAG
AATAATATGGATAGCAAGATAGTATTTTTATTCATAATCGCAAAACTTTG
GCAAATAGATGTATTTCGATATTTTAAAAATTGATCCAGAATAAATTCCT
TCTACCTAAGGGTCGGCAATCTTTCAGGGTGAGAGGGGCATGTTATTAAC
TATTTAAAAAATAAACTTTCTTGAATGCTAAACGCTCTGTCCGAAGCATT
TAAAATGCATTTTATTTTGAATGCTTAGTGGAATAAATAAGGAATTCACA
ATTATTTTTTGTATATAATAAAGTTTCTATTCTTAATGGAAACATGTTTT
TTTTCTTTACTTTCAACAAAATGTTATACGATATGACTTAAGATCTTGAT
TTTAGAAAAAAAAATTCCTCTACAAATTCAATGGAACTTTTCAAAAGGCA
GCTTAACAAGAAGTAAACCTCTGTTTATTTCTATTTAAATTTAATTTGAT
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