EMLSAG00000000008, EMLSAG00000000008-682774 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000008 vs. GO
Match: - (symbol:orf19.107 species:5476 "Candida albicans" [GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14781 EMBL:AACQ01000112 RefSeq:XP_714041.1 GeneID:3644294 KEGG:cal:CaO19.7754 Uniprot:Q59WU4) HSP 1 Score: 62.003 bits (149), Expect = 4.049e-10 Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 0 Query: 102 FKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHNDKHVIXCAXPRRLAANALA 166 ++ LPIY + +I + + N VTI++ +TGSGKST +PQFL N K +I PRR+AA +LA Sbjct: 179 IREKLPIYHHKDKIIECINNNQVTIVIGETGSGKSTQIPQFLMPENPK-MIGVTQPRRVAAASLA 242
BLAST of EMLSAG00000000008 vs. GO
Match: - (symbol:Dhx16 "Protein Dhx16" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1302963 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0005634 GO:GO:0006200 GO:GO:0003676 EMBL:BX883048 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813 OMA:IEIESKW GeneTree:ENSGT00740000114868 HOVERGEN:HBG039428 OrthoDB:EOG7FXZXR CTD:8449 EMBL:AABR06099823 EMBL:AABR06099822 EMBL:CH474118 RefSeq:NP_997661.1 UniGene:Rn.6832 STRING:10116.ENSRNOP00000046021 Ensembl:ENSRNOT00000065025 GeneID:294232 KEGG:rno:294232 UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13 Uniprot:Q6MG13) HSP 1 Score: 62.003 bits (149), Expect = 4.245e-10 Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 0 Query: 66 QLINNADEMEEFQRKIQ-----EILAYPENMMPKLQRE-IQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD--HNDKHV-IXCAXPRRLAANALA 166 QL+ DE EF R Q E + P Q+E IQ ++ LP++ FR ++ + N+ V I+ +TGSGK+T +PQ+L + + K + I C PRR+AA ++A Sbjct: 356 QLVLEEDETIEFVRAAQLQGDEEPSSGPPLSAQAQQKESIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVA 465
BLAST of EMLSAG00000000008 vs. GO
Match: - (symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity" evidence=IEA] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1302963 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0005634 GO:GO:0006200 GO:GO:0003676 EMBL:BX883048 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813 OMA:IEIESKW GeneTree:ENSGT00740000114868 HOVERGEN:HBG039428 OrthoDB:EOG7FXZXR CTD:8449 EMBL:AABR06099823 EMBL:AABR06099822 EMBL:CH474118 RefSeq:NP_997661.1 UniGene:Rn.6832 STRING:10116.ENSRNOP00000046021 Ensembl:ENSRNOT00000065025 GeneID:294232 KEGG:rno:294232 UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13 Uniprot:Q6MG13) HSP 1 Score: 62.003 bits (149), Expect = 4.245e-10 Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 0 Query: 66 QLINNADEMEEFQRKIQ-----EILAYPENMMPKLQRE-IQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD--HNDKHV-IXCAXPRRLAANALA 166 QL+ DE EF R Q E + P Q+E IQ ++ LP++ FR ++ + N+ V I+ +TGSGK+T +PQ+L + + K + I C PRR+AA ++A Sbjct: 356 QLVLEEDETIEFVRAAQLQGDEEPSSGPPLSAQAQQKESIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVA 465
BLAST of EMLSAG00000000008 vs. GO
Match: - (symbol:Tb927.5.1150 "Pre-mRNA splicing factor ATP-dependent RNA helicase, putative" species:999953 "Trypanosoma brucei brucei strain 927/4 GUTat10.1" [GO:0008380 "RNA splicing" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 GO:GO:0008380 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:FTSKDYY EMBL:AC159443 EMBL:CP000068 RefSeq:XP_844789.1 ProteinModelPortal:D6XG53 GeneID:3657222 KEGG:tbr:Tb927.5.1150 Uniprot:D6XG53) HSP 1 Score: 61.6178 bits (148), Expect = 4.477e-10 Identity = 25/69 (36.23%), Postives = 46/69 (66.67%), Query Frame = 0 Query: 99 IQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHNDKHVIXCAXPRRLAANALAD 167 ++ ++ LPI+ + +I+ + Y +LV +TGSGK+T +PQF+ + N +H I C PRR+AA ++++ Sbjct: 34 LRGVREKLPIFAAKQKIQRLISRYQTLLLVGETGSGKTTQVPQFVLEMNPEHAIACTQPRRVAAISVSE 102
BLAST of EMLSAG00000000008 vs. GO
Match: - (symbol:AT5G10370 "AT5G10370" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS] [GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867 InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00097 Pfam:PF00270 Pfam:PF00271 Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322 SMART:SM00490 SMART:SM00647 SMART:SM00847 InterPro:IPR015880 Prosite:PS00518 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0005524 EMBL:CP002688 GO:GO:0008270 GO:GO:0006200 GO:GO:0003723 SMART:SM00355 Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12818 RefSeq:NP_196599.2 UniGene:At.49004 ProteinModelPortal:F4KGU4 PRIDE:F4KGU4 EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370 OMA:HELNIIV ArrayExpress:F4KGU4 Uniprot:F4KGU4) HSP 1 Score: 62.003 bits (149), Expect = 4.734e-10 Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 0 Query: 95 LQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHN--DKHVIXCAXPRRLAANALAD 167 ++RE + + LPIY +R QI + + +L+ +TGSGKST L QFL D I C PR++AA LAD Sbjct: 295 IRRECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLAD 369
BLAST of EMLSAG00000000008 vs. C. finmarchicus
Match: gi|592825264|gb|GAXK01129925.1| (TSA: Calanus finmarchicus comp71993_c1_seq2 transcribed RNA sequence) HSP 1 Score: 37.3502 bits (85), Expect = 2.225e-2 Identity = 19/54 (35.19%), Postives = 29/54 (53.70%), Query Frame = 0 Query: 97 REIQTFKKH-----LPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD 145 R++ F +H LPI + +I D V + +L TG GKST +PQ++ D Sbjct: 397 RKMFNFNQHKDGWKLPIIDIKEKILDLVGGNQIVVLSGPTGCGKSTQVPQYILD 558
BLAST of EMLSAG00000000008 vs. C. finmarchicus
Match: gi|592825265|gb|GAXK01129924.1| (TSA: Calanus finmarchicus comp71993_c1_seq1 transcribed RNA sequence) HSP 1 Score: 37.3502 bits (85), Expect = 2.265e-2 Identity = 19/54 (35.19%), Postives = 29/54 (53.70%), Query Frame = 0 Query: 97 REIQTFKKH-----LPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD 145 R++ F +H LPI + +I D V + +L TG GKST +PQ++ D Sbjct: 397 RKMFNFNQHKDGWKLPIIDIKEKILDLVGGNQIVVLSGPTGCGKSTQVPQYILD 558
BLAST of EMLSAG00000000008 vs. L. salmonis peptides
Match: EMLSAP00000000008 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1003:2749:3432:-1 gene:EMLSAG00000000008 transcript:EMLSAT00000000008 description:"maker-LSalAtl2s1003-augustus-gene-0.17") HSP 1 Score: 357.066 bits (915), Expect = 7.515e-127 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0 Query: 1 MTTFQALLTELRTQFQHENEEIKNKIKDVEESLEWNEVPRGRGSKEFRMLNTREAKLKTIHTLREQLINNADEMEEFQRKIQEILAYPENMMPKLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHNDKHVIXCAXPRRLAANALADYTTDCL 173 MTTFQALLTELRTQFQHENEEIKNKIKDVEESLEWNEVPRGRGSKEFRMLNTREAKLKTIHTLREQLINNADEMEEFQRKIQEILAYPENMMPKLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHNDKHVIXCAXPRRLAANALADYTTDCL Sbjct: 1 MTTFQALLTELRTQFQHENEEIKNKIKDVEESLEWNEVPRGRGSKEFRMLNTREAKLKTIHTLREQLINNADEMEEFQRKIQEILAYPENMMPKLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHNDKHVIXCAXPRRLAANALADYTTDCL 173
BLAST of EMLSAG00000000008 vs. L. salmonis peptides
Match: EMLSAP00000001982 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1352:76602:86940:1 gene:EMLSAG00000001982 transcript:EMLSAT00000001982 description:"maker-LSalAtl2s1352-snap-gene-0.20") HSP 1 Score: 326.25 bits (835), Expect = 1.469e-114 Identity = 156/173 (90.17%), Postives = 162/173 (93.64%), Query Frame = 0 Query: 1 MTTFQALLTELRTQFQHENEEIKNKIKDVEESLEWNEVPRGRGSKEFRMLNTREAKLKTIHTLREQLINNADEMEEFQRKIQEILAYPENMMPKLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHNDKHVIXCAXPRRLAANALADYTTDCL 173 MTTFQALLT+LRTQFQ ENEEIKNKIK VEESL+WNEVP GRGSKEFRMLNTREAKLKTIHTLREQLINNADEMEEFQR +QEIL PENM+PKL REIQTFKKHLPIYRFRSQI DTVQNYDVTILVADTGSGKSTLLPQFLHDHN+KHVI CA PRRLAANALADYT +CL Sbjct: 1 MTTFQALLTDLRTQFQRENEEIKNKIKGVEESLQWNEVPSGRGSKEFRMLNTREAKLKTIHTLREQLINNADEMEEFQRTLQEILTNPENMVPKLHREIQTFKKHLPIYRFRSQIMDTVQNYDVTILVADTGSGKSTLLPQFLHDHNEKHVIYCAQPRRLAANALADYTRECL 173
BLAST of EMLSAG00000000008 vs. L. salmonis peptides
Match: EMLSAP00000012177 (pep:novel supercontig:LSalAtl2s:LSalAtl2s87:33379:41665:1 gene:EMLSAG00000012177 transcript:EMLSAT00000012177 description:"snap_masked-LSalAtl2s87-processed-gene-0.14") HSP 1 Score: 124.405 bits (311), Expect = 9.999e-33 Identity = 68/131 (51.91%), Postives = 88/131 (67.18%), Query Frame = 0 Query: 45 KEFRMLNTREAKLKTIHTLREQLINNADEMEEFQRKIQEI--LAYPENMMPKLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHNDKHVIXCAXPRRLAANALADYTTDCL 173 + F + +E K++TI+ L+ +L EMEEFQ +I EI L P N KL EI F KHLPIYRFRS I ++++ DVTILVA+TGSGKSTL+ QFLH +++ VI C PR+LAAN L +YT CL Sbjct: 40 RNFLSKSLKERKVETINALQAELETKLIEMEEFQSRILEISSLNTP-NKEEKLNLEIDIFSKHLPIYRFRSTILESIEKNDVTILVAETGSGKSTLVTQFLHTNDEDIVIYCCQPRKLAANGLMEYTNTCL 169
BLAST of EMLSAG00000000008 vs. L. salmonis peptides
Match: EMLSAP00000012656 (pep:novel supercontig:LSalAtl2s:LSalAtl2s95:1052970:1062187:-1 gene:EMLSAG00000012656 transcript:EMLSAT00000012656 description:"maker-LSalAtl2s95-augustus-gene-10.21") HSP 1 Score: 118.627 bits (296), Expect = 1.040e-30 Identity = 68/148 (45.95%), Postives = 94/148 (63.51%), Query Frame = 0 Query: 8 LTELRTQFQHENEEIKNKIKDVEESLEWNEVPRGRGSKEFRMLNTREAKLKTIHTLREQLINNADEMEEFQRKIQEILAY-PENMMPKLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHNDKHVIXC 154 L ++ QF + +EI+++I+ + L+ G+ K F + RE KL TI+ L+ +L EMEEFQ +I EIL+ P N KL EI F KHLPIYRFRS I ++++ DVTILVA+TGSGKSTL+ QFLH +++ VI C Sbjct: 7 LNDVSVQFMEDRKEIEDRIEKLSLELK----ATGKKKKNFLSKSLREMKLGTINALQAKLRTKLFEMEEFQSRILEILSLNPPNKEKKLHLEIDIFSKHLPIYRFRSTILESIEKNDVTILVAETGSGKSTLVTQFLHTNDEDIVIYC 150
BLAST of EMLSAG00000000008 vs. L. salmonis peptides
Match: EMLSAP00000000842 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1142:167553:175470:1 gene:EMLSAG00000000842 transcript:EMLSAT00000000842 description:"maker-LSalAtl2s1142-augustus-gene-1.32") HSP 1 Score: 59.3066 bits (142), Expect = 7.213e-11 Identity = 29/80 (36.25%), Postives = 47/80 (58.75%), Query Frame = 0 Query: 90 NMMPKLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHN---DKHVIXCAXPRRLAANALA 166 N K + I+ KK LP+Y FR + + + + V I+ +TGSGK+T +PQ+L++ D I C PRR+AA +++ Sbjct: 347 NETQKKRMSIEETKKSLPVYPFRKSLIEAINEHQVLIIEGETGSGKTTQIPQYLYEAGFTKDGKKIGCTQPRRVAAMSVS 426
BLAST of EMLSAG00000000008 vs. L. salmonis peptides
Match: EMLSAP00000009944 (pep:novel supercontig:LSalAtl2s:LSalAtl2s64:495820:499248:-1 gene:EMLSAG00000009944 transcript:EMLSAT00000009944 description:"maker-LSalAtl2s64-augustus-gene-5.22") HSP 1 Score: 58.5362 bits (140), Expect = 1.310e-10 Identity = 27/71 (38.03%), Postives = 45/71 (63.38%), Query Frame = 0 Query: 103 KKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD--HNDKHVIXCAXPRRLAANALADYTTD 171 ++ LPI+ R Q+ + +++ V I+V +TGSGK+T L Q+LH+ + +I C PRR+AA ++A D Sbjct: 400 REFLPIFAVRQQLLNIIRDNSVIIIVGETGSGKTTQLTQYLHEDGYTKYGIIGCTQPRRVAAMSVAKRVAD 470
BLAST of EMLSAG00000000008 vs. L. salmonis peptides
Match: EMLSAP00000008555 (pep:novel supercontig:LSalAtl2s:LSalAtl2s527:255308:263399:1 gene:EMLSAG00000008555 transcript:EMLSAT00000008555 description:"maker-LSalAtl2s527-augustus-gene-1.59") HSP 1 Score: 57.3806 bits (137), Expect = 3.687e-10 Identity = 27/83 (32.53%), Postives = 47/83 (56.63%), Query Frame = 0 Query: 88 PENMMPKLQREIQTFKKH--LPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHNDKH--VIXCAXPRRLAANALA 166 P + +P R + F+K LP++ +R + D + + LV +TGSGK+T +PQ+ ++ K + C PRR+AA ++A Sbjct: 33 PHSALPYTPRYFELFRKRITLPVWEYRDKFLDLLGQHQCICLVGETGSGKTTQIPQWCAEYASKERKSVACTQPRRVAAMSVA 115
BLAST of EMLSAG00000000008 vs. L. salmonis peptides
Match: EMLSAP00000009033 (pep:novel supercontig:LSalAtl2s:LSalAtl2s566:265163:268669:-1 gene:EMLSAG00000009033 transcript:EMLSAT00000009033 description:"maker-LSalAtl2s566-augustus-gene-2.40") HSP 1 Score: 54.299 bits (129), Expect = 3.427e-9 Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 0 Query: 103 KKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHNDKHVIXCAXPRRLAANALAD 167 + +LPI +R++I ++ V I+ DTG GKST +PQFL + + I C PRRLA ALA+ Sbjct: 142 QSNLPISGYRNEIIQSLVQKQVVIIAGDTGCGKSTQVPQFLLEAGYEK-IACTQPRRLACIALAN 205
BLAST of EMLSAG00000000008 vs. L. salmonis peptides
Match: EMLSAP00000002448 (pep:novel supercontig:LSalAtl2s:LSalAtl2s146:214653:221407:1 gene:EMLSAG00000002448 transcript:EMLSAT00000002448 description:"maker-LSalAtl2s146-augustus-gene-2.13") HSP 1 Score: 48.9062 bits (115), Expect = 1.762e-7 Identity = 27/70 (38.57%), Postives = 39/70 (55.71%), Query Frame = 0 Query: 106 LPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHNDKHVIXC----AXPRRLAANALADYTTD 171 LPI R R I ++ VTI+ TG GK+T +PQF+ DH + + C PRR+AA+++A D Sbjct: 126 LPIDRERDHIIKQIEANKVTIITGLTGCGKTTRVPQFIFDHCFSNNMYCNIIVTQPRRIAAHSVARRICD 195
BLAST of EMLSAG00000000008 vs. L. salmonis peptides
Match: EMLSAP00000008236 (pep:novel supercontig:LSalAtl2s:LSalAtl2s497:66849:78231:1 gene:EMLSAG00000008236 transcript:EMLSAT00000008236 description:"augustus_masked-LSalAtl2s497-processed-gene-0.3") HSP 1 Score: 48.1358 bits (113), Expect = 3.018e-7 Identity = 26/76 (34.21%), Postives = 39/76 (51.32%), Query Frame = 0 Query: 96 QREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFL---HDHNDKHV-IXCAXPRRLAANALAD 167 Q IQ + LPI+ F+ I ++ + V ++ TG GK+T +PQ+L HV I C PRR A + A+ Sbjct: 162 QSYIQETTQKLPIHNFKDLIMSSIDTHQVCLVTGPTGCGKTTQIPQYLLECASDTQNHVRIVCTEPRRFAVLSTAE 237
BLAST of EMLSAG00000000008 vs. SwissProt
Match: gi|74996806|sp|Q54MH3.1|DHX16_DICDI (RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16; AltName: Full=DEAH-box protein 16) HSP 1 Score: 70.8626 bits (172), Expect = 1.514e-13 Identity = 32/70 (45.71%), Postives = 46/70 (65.71%), Query Frame = 0 Query: 99 IQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHNDKHV--IXCAXPRRLAANALA 166 IQ +K LP+Y +R Q+ D V+ Y V I+V +TGSGK+T +PQ+LH+ I C PRR+AA ++A Sbjct: 460 IQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQPRRVAAMSVA 529
BLAST of EMLSAG00000000008 vs. SwissProt
Match: gi|75331116|sp|Q8VY00.1|ESP3_ARATH (RecName: Full=Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1; AltName: Full=DEAH RNA helicase homolog PRP2; AltName: Full=Protein EMBRYO DEFECTIVE 2733; AltName: Full=Protein ENHANCED SILENCING PHENOTYPE 3) HSP 1 Score: 68.9366 bits (167), Expect = 5.653e-13 Identity = 29/71 (40.85%), Postives = 48/71 (67.61%), Query Frame = 0 Query: 98 EIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD--HNDKHVIXCAXPRRLAANALA 166 E+Q ++ LPIY +R Q+ V+ + V ++V DTGSGK+T +PQ+LH+ + + + C PRR+AA ++A Sbjct: 396 ELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVA 466
BLAST of EMLSAG00000000008 vs. SwissProt
Match: gi|26006959|sp|O60231.2|DHX16_HUMAN (RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16; AltName: Full=ATP-dependent RNA helicase #3; AltName: Full=DEAH-box protein 16) HSP 1 Score: 68.1662 bits (165), Expect = 1.277e-12 Identity = 46/145 (31.72%), Postives = 71/145 (48.97%), Query Frame = 0 Query: 30 EESLEWNEVPRGRGSKEFRMLNTREAKLKTIHTLREQLINNADEMEEFQRKIQ-----EILAYPENMMPKLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDH---NDKHVIXCAXPRRLAANALA 166 EE W E G S +F R+A + QL+ +E EF R Q E A P + + + IQ ++ LP++ FR ++ + N+ V I+ +TGSGK+T +PQ+L + N I C PRR+AA ++A Sbjct: 324 EEQRRWEEARLGAASLKF---GARDA---ASQEPKYQLVLEEEETIEFVRATQLQGDEEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVA 462
BLAST of EMLSAG00000000008 vs. SwissProt
Match: gi|38502930|sp|Q7YR39.1|DHX16_PANTR (RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16; AltName: Full=ATP-dependent RNA helicase #3; AltName: Full=DEAH-box protein 16) HSP 1 Score: 68.1662 bits (165), Expect = 1.302e-12 Identity = 46/145 (31.72%), Postives = 71/145 (48.97%), Query Frame = 0 Query: 30 EESLEWNEVPRGRGSKEFRMLNTREAKLKTIHTLREQLINNADEMEEFQRKIQ-----EILAYPENMMPKLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDH---NDKHVIXCAXPRRLAANALA 166 EE W E G S +F R+A + QL+ +E EF R Q E A P + + + IQ ++ LP++ FR ++ + N+ V I+ +TGSGK+T +PQ+L + N I C PRR+AA ++A Sbjct: 327 EEQRRWEEARLGAASLKF---GARDA---ASQEPKYQLVLEEEETIEFVRATQLQGNEEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVA 465
BLAST of EMLSAG00000000008 vs. SwissProt
Match: gi|19862987|sp|Q10752.2|CDC28_SCHPO (RecName: Full=Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28; AltName: Full=Pre-mRNA-processing protein 8) HSP 1 Score: 67.781 bits (164), Expect = 1.594e-12 Identity = 29/76 (38.16%), Postives = 50/76 (65.79%), Query Frame = 0 Query: 94 KLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHN---DKHVIXCAXPRRLAANALA 166 K+++ +++ +K LP+Y+++ + + Y V ++VA+TGSGK+T LPQFLH+ I C PRR+AA ++A Sbjct: 406 KVEKSLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRRVAAMSVA 481
BLAST of EMLSAG00000000008 vs. SwissProt
Match: gi|961512555|sp|F4IJV4.1|DEAH6_ARATH (RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6; AltName: Full=DEAH RNA helicase homolog PRP2; AltName: Full=Protein MATERNAL EFFECT EMBRYO ARREST 29) HSP 1 Score: 65.0846 bits (157), Expect = 1.225e-11 Identity = 29/70 (41.43%), Postives = 48/70 (68.57%), Query Frame = 0 Query: 99 IQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHNDKHV--IXCAXPRRLAANALA 166 +Q +K LPIY +R Q+ + V+++ V I+V +TGSGK+T +PQ+LH+ + + C PRR+AA ++A Sbjct: 397 LQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVA 466
BLAST of EMLSAG00000000008 vs. SwissProt
Match: gi|961512556|sp|F4JRJ6.1|DEAH9_ARATH (RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9; AltName: Full=DEAH RNA helicase homolog DDX35) HSP 1 Score: 62.003 bits (149), Expect = 1.458e-10 Identity = 29/71 (40.85%), Postives = 47/71 (66.20%), Query Frame = 0 Query: 99 IQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD---HNDKHVIXCAXPRRLAANALA 166 I+ ++ LP+Y++R++I V+N+ TI+V +TGSGK+T +PQ+L + VI C PRRLA A++ Sbjct: 41 IEKQRQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRLAVQAVS 111
BLAST of EMLSAG00000000008 vs. SwissProt
Match: gi|961512557|sp|F4KGU4.1|DEAHC_ARATH (RecName: Full=ATP-dependent RNA helicase DEAH12, chloroplastic; Flags: Precursor) HSP 1 Score: 62.003 bits (149), Expect = 1.746e-10 Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 0 Query: 95 LQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHN--DKHVIXCAXPRRLAANALAD 167 ++RE + + LPIY +R QI + + +L+ +TGSGKST L QFL D I C PR++AA LAD Sbjct: 295 IRRECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLAD 369
BLAST of EMLSAG00000000008 vs. SwissProt
Match: gi|75072475|sp|Q767K6.1|DHX16_PIG (RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16; AltName: Full=DEAH-box protein 16) HSP 1 Score: 61.2326 bits (147), Expect = 3.226e-10 Identity = 46/145 (31.72%), Postives = 72/145 (49.66%), Query Frame = 0 Query: 30 EESLEWNEVPRGRGSKEFRMLNTREAKLKTIHTLREQLINNADEMEEFQRKIQ-----EILAYPENMMPKLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD--HNDKHV-IXCAXPRRLAANALA 166 EE W E G S +F R+A + QL+ +E EF R Q E A P + + IQ ++ LP++ FR ++ V N+ + I+ +TGSGK+T +PQ+L + + K + I C PRR+AA ++A Sbjct: 328 EEQRRWEEARLGAASLKF---GARDA---ASQEPKYQLVLEEEETIEFVRATQLQGDEEPAAPPAPTQAQQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVAAMSVA 466
BLAST of EMLSAG00000000008 vs. SwissProt
Match: gi|3915519|sp|O45244.2|DHX16_CAEEL (RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4; AltName: Full=Masculinization of germline protein 4; AltName: Full=Sex determination protein mog-4) HSP 1 Score: 59.3066 bits (142), Expect = 1.212e-9 Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 0 Query: 94 KLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHN---DKHVIXCAXPRRLAANALADYTTD 171 K + I+ +K LP+Y FR + V+ + V I+ +TGSGK+T LPQ+L++ I C PRR+AA ++A D Sbjct: 352 KKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAAMSVAARVAD 432
BLAST of EMLSAG00000000008 vs. Select Arthropod Genomes
Match: EAA05524.4 (AGAP010872-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 57.7658 bits (138), Expect = 2.268e-9 Identity = 28/67 (41.79%), Postives = 44/67 (65.67%), Query Frame = 0 Query: 103 KKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHN--DKHVIXCAXPRRLAANALAD 167 ++ LPI ++R QI +++Y +LV +TGSGKST +PQ+L++ K +I PRR++A LAD Sbjct: 47 RERLPIRQYRDQILYCLEHYQTLVLVGETGSGKSTQVPQYLYEFGWHTKGLIGITEPRRISAITLAD 113
BLAST of EMLSAG00000000008 vs. Select Arthropod Genomes
Match: EEB14339.1 (pre-mRNA-splicing factor ATP-dependent RNA helicase prp16, putative [Pediculus humanus corporis]) HSP 1 Score: 57.7658 bits (138), Expect = 2.451e-9 Identity = 30/120 (25.00%), Postives = 63/120 (52.50%), Query Frame = 0 Query: 54 EAKLKTIHTLREQLINNADEMEEFQRKIQEILAYPENMMPKLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD--HNDKHVIXCAXPRRLAANALADYTTD 171 E KT H + + + ++ +F +K + I +++LP++ R ++ + ++ ++ I++ +TGSGK+T L Q+LH+ ++ +I C PRR+AA ++A +D Sbjct: 459 ETDYKTDHKFAQHMKDKSEATSDFAKK----------------KSILQQRQYLPVFAVRQELLNVIRENNIVIIIGETGSGKTTQLTQYLHEEGYSKYGMIGCTQPRRVAAMSVAKRVSD 562
BLAST of EMLSAG00000000008 vs. Select Arthropod Genomes
Match: AAF48351.2 (lethal (1) G0007, isoform A [Drosophila melanogaster]) HSP 1 Score: 57.3806 bits (137), Expect = 2.756e-9 Identity = 26/78 (33.33%), Postives = 50/78 (64.10%), Query Frame = 0 Query: 96 QREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD--HNDKHVIXCAXPRRLAANALADYTTD 171 ++ I ++ LP++ R ++ + ++ V I+V +TGSGK+T L Q+LH+ ++ + +I C PRR+AA ++A +D Sbjct: 524 KKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVAAMSVAKRVSD 601
BLAST of EMLSAG00000000008 vs. Select Arthropod Genomes
Match: XP_396598.4 (PREDICTED: probable ATP-dependent RNA helicase DHX35 [Apis mellifera]) HSP 1 Score: 56.9954 bits (136), Expect = 3.433e-9 Identity = 26/72 (36.11%), Postives = 44/72 (61.11%), Query Frame = 0 Query: 103 KKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDH---NDKHVIXCAXPRRLAANALADYTTD 171 ++ LP ++++S I ++ Y +L+ +TG GKST LPQ+L + +D +I PRR+AA +LA+ D Sbjct: 44 RQRLPTFKYKSHIIYLLEKYQTLVLIGETGCGKSTQLPQYLLEAGWCSDGKIIGITEPRRVAATSLANRVAD 115
BLAST of EMLSAG00000000008 vs. Select Arthropod Genomes
Match: AAF53766.1 (lethal (2) 37Cb [Drosophila melanogaster]) HSP 1 Score: 56.9954 bits (136), Expect = 3.973e-9 Identity = 26/67 (38.81%), Postives = 43/67 (64.18%), Query Frame = 0 Query: 103 KKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHN---DKHVIXCAXPRRLAANALA 166 ++ LP+Y F+ + V+ + V I+ +TGSGK+T +PQ+L + DK +I C PRR+AA ++A Sbjct: 249 RRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRVAAMSVA 315
BLAST of EMLSAG00000000008 vs. nr
Match: gi|367039109|ref|XP_003649935.1| (hypothetical protein THITE_2109083 [Thielavia terrestris NRRL 8126] >gi|346997196|gb|AEO63599.1| hypothetical protein THITE_2109083 [Thielavia terrestris NRRL 8126]) HSP 1 Score: 76.2554 bits (186), Expect = 4.512e-13 Identity = 41/97 (42.27%), Postives = 55/97 (56.70%), Query Frame = 0 Query: 78 QRKIQEILAYPENMMPKLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHN---DKHVIXCAXPRRLAANALADYTTD 171 QR +QE + E K R IQ +K LP+Y +R D V+ Y V ILV +TGSGK+T +PQ+LH+ D I C PRR+AA ++A D Sbjct: 163 QRILQEKIEAAE----KAARTIQEVRKSLPVYAYRDAFLDAVKEYQVLILVGETGSGKTTQIPQYLHEAGFTKDGMKIACTQPRRVAAMSVAARVAD 255
BLAST of EMLSAG00000000008 vs. nr
Match: gi|367026071|ref|XP_003662320.1| (hypothetical protein MYCTH_2302831 [Thermothelomyces thermophila ATCC 42464] >gi|347009588|gb|AEO57075.1| hypothetical protein MYCTH_2302831 [Thermothelomyces thermophila ATCC 42464]) HSP 1 Score: 75.8702 bits (185), Expect = 5.293e-13 Identity = 39/93 (41.94%), Postives = 53/93 (56.99%), Query Frame = 0 Query: 82 QEILAYPENMMPKLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHN---DKHVIXCAXPRRLAANALADYTTD 171 Q IL + K Q+ IQ +K LP+Y +R D V+ Y V ILV +TGSGK+T +PQ+LH+ D I C PRR+AA ++A D Sbjct: 262 QRILKEKIDAAEKAQKTIQEVRKSLPVYAYRDAFLDAVKEYQVLILVGETGSGKTTQIPQYLHEAGFTKDGMKIACTQPRRVAAMSVAARVAD 354
BLAST of EMLSAG00000000008 vs. nr
Match: gi|1002292189|ref|XP_015650435.1| (PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Oryza sativa Japonica Group]) HSP 1 Score: 75.0998 bits (183), Expect = 1.043e-12 Identity = 33/74 (44.59%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 95 LQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD--HNDKHVIXCAXPRRLAANALA 166 L+RE+Q +K LPIY+FR ++ V+ Y V ++V +TGSGK+T +PQ+LH+ + K + C PRR+AA ++A Sbjct: 400 LKRELQDERKTLPIYKFRDELLKAVEEYQVIVIVGETGSGKTTQIPQYLHEAGYTAKGKVACTQPRRVAAMSVA 473
BLAST of EMLSAG00000000008 vs. nr
Match: gi|573954113|ref|XP_006659312.1| (PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like [Oryza brachyantha]) HSP 1 Score: 75.0998 bits (183), Expect = 1.053e-12 Identity = 33/74 (44.59%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 95 LQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD--HNDKHVIXCAXPRRLAANALA 166 L+RE+Q +K LPIY+FR ++ V+ Y V ++V +TGSGK+T +PQ+LH+ + K + C PRR+AA ++A Sbjct: 401 LKRELQDERKTLPIYKFRDELLKAVEEYQVIVIVGETGSGKTTQIPQYLHEAGYTAKGKVACTQPRRVAAMSVA 474
BLAST of EMLSAG00000000008 vs. nr
Match: gi|670394434|ref|XP_008677648.1| (PREDICTED: uncharacterized protein LOC100383864 isoform X1 [Zea mays]) HSP 1 Score: 74.7146 bits (182), Expect = 1.514e-12 Identity = 33/74 (44.59%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 95 LQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD--HNDKHVIXCAXPRRLAANALA 166 L+RE+Q +K LPI++FR ++ V+ Y V ++V +TGSGK+T +PQFLH+ + K + C PRR+AA ++A Sbjct: 385 LKRELQDERKTLPIFKFRDELLKAVEEYQVIVIVGETGSGKTTQIPQFLHESGYTAKGKVACTQPRRVAAMSVA 458
BLAST of EMLSAG00000000008 vs. nr
Match: gi|1026957165|ref|XP_016603295.1| (protein of unknown function DUF1605 [Penicillium expansum] >gi|700474797|gb|KGO62775.1| protein of unknown function DUF1605 [Penicillium expansum]) HSP 1 Score: 74.7146 bits (182), Expect = 1.698e-12 Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 0 Query: 103 KKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHN---DKHVIXCAXPRRLAANALADYTTD 171 +K LPIY+FR QI D V Y V I+V +TGSGK+T LPQ+LH+ D I C PRR+AA ++A D Sbjct: 474 RKSLPIYQFREQILDAVAKYQVLIIVGETGSGKTTQLPQYLHEAGYTKDGLKIGCTQPRRVAAMSVAARVAD 545
BLAST of EMLSAG00000000008 vs. nr
Match: gi|594148808|emb|CCW66889.1| (unnamed protein product [Phytomonas sp. isolate Hart1]) HSP 1 Score: 74.3294 bits (181), Expect = 2.384e-12 Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 0 Query: 88 PENMMPKLQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHN--DKHVIXCAXPRRLAANALA 166 P +P +++Q ++ LPIYR R++I V + VTILV +TGSGK+T +PQ+L +H K +I C PRR+AA LA Sbjct: 378 PHFGIPPSTQDLQRQRRSLPIYRKRAEIIQYVDTHSVTILVGETGSGKTTQIPQYLEEHGYAKKGIICCTQPRRVAAETLA 458
BLAST of EMLSAG00000000008 vs. nr
Match: gi|514747054|ref|XP_004961277.1| (PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [Setaria italica]) HSP 1 Score: 73.9442 bits (180), Expect = 2.647e-12 Identity = 32/74 (43.24%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 95 LQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD--HNDKHVIXCAXPRRLAANALA 166 L+RE+Q +K LPIY+FR ++ V+ Y V ++V +TGSGK+T +PQ+LH+ + K + C PRR+AA +++ Sbjct: 400 LKRELQDERKTLPIYKFRDELLKAVEEYQVIVIVGETGSGKTTQIPQYLHEAGYTAKGKVACTQPRRVAAMSVS 473
BLAST of EMLSAG00000000008 vs. nr
Match: gi|992169995|gb|KXG30390.1| (hypothetical protein SORBI_004G174200 [Sorghum bicolor] >gi|992169997|gb|KXG30392.1| hypothetical protein SORBI_004G174200 [Sorghum bicolor]) HSP 1 Score: 73.559 bits (179), Expect = 3.848e-12 Identity = 32/74 (43.24%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 95 LQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD--HNDKHVIXCAXPRRLAANALA 166 L+RE+Q +K LPI++FR ++ V+ Y V ++V +TGSGK+T +PQ+LH+ + K + C PRR+AA ++A Sbjct: 395 LKRELQDERKTLPIFKFRDELLKAVEEYQVIVIVGETGSGKTTQIPQYLHEAGYTAKGKVACTQPRRVAAMSVA 468
BLAST of EMLSAG00000000008 vs. nr
Match: gi|992169996|gb|KXG30391.1| (hypothetical protein SORBI_004G174200 [Sorghum bicolor]) HSP 1 Score: 73.559 bits (179), Expect = 3.960e-12 Identity = 32/74 (43.24%), Postives = 52/74 (70.27%), Query Frame = 0 Query: 95 LQREIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHD--HNDKHVIXCAXPRRLAANALA 166 L+RE+Q +K LPI++FR ++ V+ Y V ++V +TGSGK+T +PQ+LH+ + K + C PRR+AA ++A Sbjct: 394 LKRELQDERKTLPIFKFRDELLKAVEEYQVIVIVGETGSGKTTQIPQYLHEAGYTAKGKVACTQPRRVAAMSVA 467
BLAST of EMLSAG00000000008 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold40_size501252-snap-gene-2.13 (protein:Tk06161 transcript:maker-scaffold40_size501252-snap-gene-2.13-mRNA-1 annotation:"atp-dependent rna helicase kurz") HSP 1 Score: 56.225 bits (134), Expect = 5.839e-10 Identity = 32/88 (36.36%), Postives = 48/88 (54.55%), Query Frame = 0 Query: 88 PENMMPKLQR-EIQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHN---DKHVIXCAXPRRLAANALADYTTD 171 P M +R EIQ ++ LPI I + +Q + V IL +TGSGK+T +PQFL++ + +I PRR+AA ++A D Sbjct: 244 PSKFMSVARRPEIQAQREKLPIIAEEQAIMEAIQAHPVVILAGETGSGKTTQVPQFLYEAGFTKNGQLIGVTEPRRVAAMSMAQRVGD 331
BLAST of EMLSAG00000000008 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold169_size292178-processed-gene-0.0 (protein:Tk07929 transcript:snap_masked-scaffold169_size292178-processed-gene-0.0-mRNA-1 annotation:"pre-mrna-splicing factor atp-dependent rna helicase dhx16-like") HSP 1 Score: 55.0694 bits (131), Expect = 1.507e-9 Identity = 25/71 (35.21%), Postives = 44/71 (61.97%), Query Frame = 0 Query: 99 IQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDH---NDKHVIXCAXPRRLAANALA 166 I+ +K LP+Y FR + ++ + V I+ +TGSGK+T +PQ+L+ ++ I C PRR+AA +++ Sbjct: 373 IEETQKSLPVYPFRDSLLAAIEQHQVLIIEGETGSGKTTQIPQYLYQGGYTSEGRKIGCTQPRRVAAMSVS 443
BLAST of EMLSAG00000000008 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold382_size189932-processed-gene-0.10 (protein:Tk03701 transcript:snap_masked-scaffold382_size189932-processed-gene-0.10-mRNA-1 annotation:"pre-mrna-splicing factor atp-dependent rna helicase dhx16-like") HSP 1 Score: 55.0694 bits (131), Expect = 1.507e-9 Identity = 25/71 (35.21%), Postives = 44/71 (61.97%), Query Frame = 0 Query: 99 IQTFKKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDH---NDKHVIXCAXPRRLAANALA 166 I+ +K LP+Y FR + ++ + V I+ +TGSGK+T +PQ+L+ ++ I C PRR+AA +++ Sbjct: 373 IEETQKSLPVYPFRDSLLAAIEQHQVLIIEGETGSGKTTQIPQYLYQGGYTSEGRKIGCTQPRRVAAMSVS 443
BLAST of EMLSAG00000000008 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold495_size155559-processed-gene-0.2 (protein:Tk09236 transcript:snap_masked-scaffold495_size155559-processed-gene-0.2-mRNA-1 annotation:"probable atp-dependent rna helicase dhx35-like isoform x1") HSP 1 Score: 53.1434 bits (126), Expect = 6.761e-9 Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 0 Query: 103 KKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHN----DKHVIXCAXPRRLAANALA 166 ++ LPI+R R I ++ + V I+V +TGSGKST +PQ+L + + +I PRR+AA LA Sbjct: 73 RQKLPIFRTRDHILYMLEKFQVVIVVGETGSGKSTQIPQYLIEAGWCQEEGQMIGITEPRRVAATTLA 140
BLAST of EMLSAG00000000008 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1335_size46909-snap-gene-0.12 (protein:Tk00652 transcript:maker-scaffold1335_size46909-snap-gene-0.12-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_302589") HSP 1 Score: 48.9062 bits (115), Expect = 1.826e-7 Identity = 23/66 (34.85%), Postives = 38/66 (57.58%), Query Frame = 0 Query: 103 KKHLPIYRFRSQIKDTVQNYDVTILVADTGSGKSTLLPQFLHDHN--DKHVIXCAXPRRLAANALA 166 ++ LP+ R++ + V + IL+ +TG GK+T +PQFLH+ I PRR+AA ++A Sbjct: 67 RRSLPMAAARTRFLEEVSRHPTVILIGETGCGKTTQIPQFLHEARLEGGQAIGVTQPRRVAAISIA 132 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000008 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000000008 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 22
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BLAST of EMLSAG00000000008 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 10
BLAST of EMLSAG00000000008 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 25
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BLAST of EMLSAG00000000008 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 25
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BLAST of EMLSAG00000000008 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000008 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 5
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1003:2749..3432- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000008-682774 ID=EMLSAG00000000008-682774|Name=EMLSAG00000000008|organism=Lepeophtheirus salmonis|type=gene|length=684bp|location=Sequence derived from alignment at LSalAtl2s1003:2749..3432- (Lepeophtheirus salmonis)back to top Add to Basket
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