EMLSAG00000000024, EMLSAG00000000024-682790 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000024
Unique NameEMLSAG00000000024-682790
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000000024 vs. GO
Match: - (symbol:Q52V24 "Hepatopancreas trypsin" species:6717 "Pontastacus leptodactylus" [GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0046872 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 PDB:4BNR PDBsum:4BNR EMBL:AY906961 PDB:2F91 PDBsum:2F91 IntAct:Q52V24 MEROPS:S01.035 EvolutionaryTrace:Q52V24 Uniprot:Q52V24)

HSP 1 Score: 52.373 bits (124), Expect = 2.583e-8
Identity = 35/94 (37.23%), Postives = 43/94 (45.74%), Query Frame = 0 
Query:    7 MNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYD----------------------ARYGTNE---TMICAAAPR--KDSCQ 73
            ++ DI LLK      FND   P+ALPE      GDV++TGWGT  +                      A YG +E   +MICA  P   KDSCQ
Sbjct:   93 LDNDISLLKLSGSLTFNDNVAPIALPEQGHTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGADEILDSMICAGVPEGGKDSCQ 186
[Close]
BLAST of EMLSAG00000000024 vs. GO
Match: - (symbol:CG31265 species:7227 "Drosophila melanogaster" [GO:0004252 "serine-type endopeptidase activity" evidence=ISS;NAS] [GO:0006508 "proteolysis" evidence=IEA;NAS] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640 OrthoDB:EOG7MKW6Q EMBL:AY070950 UniGene:Dm.6198 ProteinModelPortal:Q8MTU7 STRING:7227.FBpp0082843 MEROPS:S01.A97 PaxDb:Q8MTU7 PRIDE:Q8MTU7 FlyBase:FBgn0051265 InParanoid:Q8MTU7 Bgee:Q8MTU7 Uniprot:Q8MTU7)

HSP 1 Score: 42.743 bits (99), Expect = 8.412e-5
Identity = 21/58 (36.21%), Postives = 34/58 (58.62%), Query Frame = 0 
Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYDARYGTN 58
            M+    M+ DI L+K      FN+  +P+ALP   ++   ++VLTGWG+  D  YG++
Sbjct:  121 MYDQPYMHNDIALVKLTENITFNELTQPIALPTRPVQLGEEIVLTGWGS--DVAYGSS 176
[Close]
BLAST of EMLSAG00000000024 vs. GO
Match: - (symbol:PRSS2 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 OrthoDB:EOG75B84T TreeFam:TF331065 GeneTree:ENSGT00740000115192 Ensembl:ENSGALT00000030486 Uniprot:F1NP19)

HSP 1 Score: 40.817 bits (94), Expect = 2.096e-4
Identity = 19/66 (28.79%), Postives = 35/66 (53.03%), Query Frame = 0 
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYDARYGTNETMICAAAP 67
            + S+ +N DI L+K  S  +++   +P+ALP +  +   + +++GWG      Y   E + C  AP
Sbjct:   33 YSSITLNNDIMLIKLASAVEYSADIQPIALPSSCAKAGTECLISGWGNTLSNGYNYPELLQCLNAP 98
[Close]
BLAST of EMLSAG00000000024 vs. GO
Match: - (symbol:Q90629 "Trypsin II-P29" species:9031 "Gallus gallus" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA] [GO:0007586 "digestion" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 GO:GO:0005615 GO:GO:0046872 GO:GO:0007586 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640 HOVERGEN:HBG013304 HOGENOM:HOG000251820 KO:K01312 CTD:5645 EMBL:U15157 PIR:S55066 RefSeq:NP_990715.1 UniGene:Gga.10164 ProteinModelPortal:Q90629 SMR:Q90629 PaxDb:Q90629 GeneID:396344 KEGG:gga:396344 InParanoid:Q90629 NextBio:20816392 PRO:PR:Q90629 Uniprot:Q90629)

HSP 1 Score: 40.0466 bits (92), Expect = 5.303e-4
Identity = 19/66 (28.79%), Postives = 35/66 (53.03%), Query Frame = 0 
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTIYDARYGTNETMICAAAP 67
            + S+ +N DI L+K  S  +++   +P+ALP +  +   + +++GWG      Y   E + C  AP
Sbjct:  101 YSSITLNNDIMLIKLASAVEYSADIQPIALPSSCAKAGTECLISGWGNTLSNGYNYPELLQCLNAP 166
[Close]
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592807267|gb|GAXK01147301.1| (TSA: Calanus finmarchicus comp42600_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 3.893e-1
Identity = 16/49 (32.65%), Postives = 25/49 (51.02%), Query Frame = 0 
Query:   10 DICLLKSKSREDFNDKGKPVALPENY-------LEFNGDVVLTGWGTIY 51
            DIC++K      F +  K + LP++Y       L  N D V+ GWG+ +
Sbjct:  376 DICIVKLSRPVSFTNNIKTICLPDSYKGQDLPSLLSNRDPVIIGWGSTF 522
[Close]
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592955535|gb|GAXK01003021.1| (TSA: Calanus finmarchicus comp2829000_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 4.430e-1
Identity = 17/46 (36.96%), Postives = 24/46 (52.17%), Query Frame = 0 
Query:    5 LGMNYDICLLKSKSREDFNDKGKPVALPENYLE--FNGDVVLTGWG 48
            + +  DICLLK K   ++ +  KP+ALP    E     +   TGWG
Sbjct:   77 VNLGNDICLLKLKESLEWTEFVKPIALPAPGQETAIGTECTSTGWG 214
[Close]
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592832670|gb|GAXK01124874.1| (TSA: Calanus finmarchicus comp24349_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 5.108e-1
Identity = 27/104 (25.96%), Postives = 39/104 (37.50%), Query Frame = 0 
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPE----NYLEFNGDVVLTGWGTIY-------------------------DARYGTNET---MICAAAPRKDSCQ 73
            + S  ++YD  +L      DF     P  LP     NY   N   V++GWGT+                             Y +N+    M+CA+A  KD+CQ
Sbjct:  398 YNSRTVDYDFSILTLCEEVDFTTDISPACLPTSSSTNY--DNRQAVVSGWGTLSTGGSTPTVLHEVTINTMSNAQCTGSSTSYSSNDITTRMLCASASGKDACQ 703
[Close]
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592949817|gb|GAXK01008736.1| (TSA: Calanus finmarchicus comp2504983_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.6462 bits (65), Expect = 5.522e-1
Identity = 22/82 (26.83%), Postives = 35/82 (42.68%), Query Frame = 0 
Query:   22 FNDKGKPVALPENYLEFNGDVV--LTGWGTIYD-------------------------ARYGT---NETMICAAAPRKDSCQ 73
            F+    P+ LP    +   DV+  +TGWGT+ +                         + YG+    ++MICA AP +D+CQ
Sbjct:  104 FSKNVSPICLPGQSGDSYDDVLSKVTGWGTLSEDGPLSNVLMGADVNTIGNAECDADYSDYGSGTIKDSMICAKAPGRDACQ 349
[Close]
BLAST of EMLSAG00000000024 vs. C. finmarchicus
Match: gi|592832673|gb|GAXK01124871.1| (TSA: Calanus finmarchicus comp24349_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 5.536e-1
Identity = 27/104 (25.96%), Postives = 39/104 (37.50%), Query Frame = 0 
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPE----NYLEFNGDVVLTGWGTIY-------------------------DARYGTNET---MICAAAPRKDSCQ 73
            + S  ++YD  +L      DF     P  LP     NY   N   V++GWGT+                             Y +N+    M+CA+A  KD+CQ
Sbjct:  633 YNSRTVDYDFSILTLCEEVDFTTDISPACLPTSSSTNY--DNRQAVVSGWGTLSTGGSTPTVLHEVTINTMSNAQCTGSSTSYSSNDITTRMLCASASGKDACQ 938
[Close]
BLAST of EMLSAG00000000024 vs. L. salmonis peptides
Match: EMLSAP00000002537 (pep:novel supercontig:LSalAtl2s:LSalAtl2s14:637103:638071:-1 gene:EMLSAG00000002537 transcript:EMLSAT00000002537 description:"maker-LSalAtl2s14-augustus-gene-6.12")

HSP 1 Score: 45.8246 bits (107), Expect = 1.810e-7
Identity = 34/98 (34.69%), Postives = 45/98 (45.92%), Query Frame = 0 
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWG-----------------TIYDAR-----YGTN--ETMICAAA--PRKDSCQ 73
            FG+ G+N DIC+L  +    FNDK   V LP+    F G  V++GWG                 T+ D++     +G N  ETMICA      K SC 
Sbjct:  113 FGTNGLNNDICVLILEEPFVFNDKVDKVKLPKQDQAFEGKAVVSGWGSRIEGFPGSFKLFKAELTLLDSKKCHQLFGDNFDETMICANGVDEMKGSCH 210
[Close]
BLAST of EMLSAG00000000024 vs. Select Arthropod Genomes
Match: gb|EFA05680.2| (serine protease P151 [Tribolium castaneum])

HSP 1 Score: 46.9802 bits (110), Expect = 4.374e-7
Identity = 24/47 (51.06%), Postives = 30/47 (63.83%), Query Frame = 0 
Query:    3 GSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGT 49
            G +G N DI LLK  +  +F D  +P+ LPE   EF GD VLTGWG+
Sbjct:  117 GRVGPN-DIALLKLATPLEFGDLVQPIGLPEPGSEFTGDSVLTGWGS 162
[Close]
BLAST of EMLSAG00000000024 vs. nr
Match: gi|31563314|gb|AAP55755.1| (trypsin 1c, partial [Lepeophtheirus salmonis])

HSP 1 Score: 92.8189 bits (229), Expect = 1.848e-21
Identity = 51/97 (52.58%), Postives = 58/97 (59.79%), Query Frame = 0 
Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            MF S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  120 MFASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPASPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 216
[Close]
BLAST of EMLSAG00000000024 vs. nr
Match: gi|19031226|gb|AAL71880.1| (trypsin type 6, partial [Lepeophtheirus salmonis])

HSP 1 Score: 92.4337 bits (228), Expect = 1.849e-21
Identity = 51/97 (52.58%), Postives = 58/97 (59.79%), Query Frame = 0 
Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            MF S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  106 MFASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPASPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 202
[Close]
BLAST of EMLSAG00000000024 vs. nr
Match: gi|19031228|gb|AAL71881.1| (trypsin type 7, partial [Lepeophtheirus salmonis])

HSP 1 Score: 92.8189 bits (229), Expect = 1.997e-21
Identity = 51/97 (52.58%), Postives = 58/97 (59.79%), Query Frame = 0 
Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            MF S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  119 MFASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPASPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 215
[Close]
BLAST of EMLSAG00000000024 vs. nr
Match: gi|19031224|gb|AAL71879.1| (trypsin type 5, partial [Lepeophtheirus salmonis])

HSP 1 Score: 90.5077 bits (223), Expect = 1.065e-20
Identity = 50/97 (51.55%), Postives = 58/97 (59.79%), Query Frame = 0 
Query:    1 MFGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            MF S G NYD+CLLK KS   FN+K KP+ALP+   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:   97 MFASHGTNYDVCLLKLKSSLHFNEKVKPIALPKKDQEFIGDVVVSGWGTISSSGPASPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 193
[Close]
BLAST of EMLSAG00000000024 vs. nr
Match: gi|31563316|gb|AAP55756.1| (trypsin 1a [Lepeophtheirus salmonis] >gi|31563318|gb|AAP55757.1| trypsin 1aii [Lepeophtheirus salmonis] >gi|31563320|gb|AAP55758.1| trypsin 1aiii [Lepeophtheirus salmonis] >gi|31563324|gb|AAP55760.1| trypsin 1a [Lepeophtheirus salmonis] >gi|71534674|emb|CAH61461.1| putative trypsin [Lepeophtheirus salmonis])

HSP 1 Score: 90.5077 bits (223), Expect = 1.498e-20
Identity = 50/96 (52.08%), Postives = 57/96 (59.38%), Query Frame = 0 
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            F S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  123 FASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPPSPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 218
[Close]
BLAST of EMLSAG00000000024 vs. nr
Match: gi|31563322|gb|AAP55759.1| (trypsin 1b [Lepeophtheirus salmonis])

HSP 1 Score: 90.5077 bits (223), Expect = 1.521e-20
Identity = 50/96 (52.08%), Postives = 57/96 (59.38%), Query Frame = 0 
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            F S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  122 FASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPPSPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 217
[Close]
BLAST of EMLSAG00000000024 vs. nr
Match: gi|19031218|gb|AAL71876.1| (trypsin type 2, partial [Lepeophtheirus salmonis])

HSP 1 Score: 90.5077 bits (223), Expect = 1.641e-20
Identity = 50/96 (52.08%), Postives = 57/96 (59.38%), Query Frame = 0 
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            F S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  119 FASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPPSPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 214
[Close]
BLAST of EMLSAG00000000024 vs. nr
Match: gi|19031220|gb|AAL71877.1| (trypsin type 3, partial [Lepeophtheirus salmonis])

HSP 1 Score: 90.1225 bits (222), Expect = 1.825e-20
Identity = 50/96 (52.08%), Postives = 56/96 (58.33%), Query Frame = 0 
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            F S G NYD+CLLK KS   FN K KP+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  119 FASHGTNYDVCLLKLKSSLHFNKKVKPIALPEKEQEFIGDVVVSGWGTISSSGPPSPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 214
[Close]
BLAST of EMLSAG00000000024 vs. nr
Match: gi|19031216|gb|AAL71875.1| (trypsin type 1, partial [Lepeophtheirus salmonis])

HSP 1 Score: 90.1225 bits (222), Expect = 1.908e-20
Identity = 49/96 (51.04%), Postives = 57/96 (59.38%), Query Frame = 0 
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            F S G NYD+CLLK KS   FN+K KP+ALPE   EF GDVV++GWGTI                        +A YG+ +ETMICAAAP KDSCQ
Sbjct:  121 FASHGTNYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPPSPVLKAVTVQVVSDEDCSBAYYGSIDETMICAAAPGKDSCQ 216
[Close]
BLAST of EMLSAG00000000024 vs. nr
Match: gi|19031222|gb|AAL71878.1| (trypsin type 4, partial [Lepeophtheirus salmonis])

HSP 1 Score: 87.8113 bits (216), Expect = 1.129e-19
Identity = 49/96 (51.04%), Postives = 56/96 (58.33%), Query Frame = 0 
Query:    2 FGSLGMNYDICLLKSKSREDFNDKGKPVALPENYLEFNGDVVLTGWGTI-----------------------YDARYGT-NETMICAAAPRKDSCQ 73
            F S G NYD+CLLK KS   FN+K  P+ALPE   EF GDVV++GWGTI                        DA YG+ +ETMICAAAP KDSCQ
Sbjct:  109 FASHGTNYDVCLLKLKSSLHFNEKVNPIALPEKDQEFIGDVVVSGWGTISSSGPPSPVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKDSCQ 204
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000024 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 4
Match NameE-valueIdentityDescription
-2.583e-837.23symbol:Q52V24 "Hepatopancreas trypsin" species:671... [more]
-8.412e-536.21symbol:CG31265 species:7227 "Drosophila melanogast... [more]
-2.096e-428.79symbol:PRSS2 "Uncharacterized protein" species:903... [more]
-5.303e-428.79symbol:Q90629 "Trypsin II-P29" species:9031 "Gallu... [more]
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BLAST of EMLSAG00000000024 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592807267|gb|GAXK01147301.1|3.893e-132.65TSA: Calanus finmarchicus comp42600_c0_seq3 transc... [more]
gi|592955535|gb|GAXK01003021.1|4.430e-136.96TSA: Calanus finmarchicus comp2829000_c0_seq1 tran... [more]
gi|592832670|gb|GAXK01124874.1|5.108e-125.96TSA: Calanus finmarchicus comp24349_c0_seq4 transc... [more]
gi|592949817|gb|GAXK01008736.1|5.522e-126.83TSA: Calanus finmarchicus comp2504983_c0_seq1 tran... [more]
gi|592832673|gb|GAXK01124871.1|5.536e-125.96TSA: Calanus finmarchicus comp24349_c0_seq1 transc... [more]

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BLAST of EMLSAG00000000024 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 11
Match NameE-valueIdentityDescription
EMLSAP000000025371.810e-734.69pep:novel supercontig:LSalAtl2s:LSalAtl2s14:637103... [more]

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BLAST of EMLSAG00000000024 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000024 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1
Match NameE-valueIdentityDescription
gb|EFA05680.2|4.374e-751.06serine protease P151 [Tribolium castaneum][more]
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BLAST of EMLSAG00000000024 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|31563314|gb|AAP55755.1|1.848e-2152.58trypsin 1c, partial [Lepeophtheirus salmonis][more]
gi|19031226|gb|AAL71880.1|1.849e-2152.58trypsin type 6, partial [Lepeophtheirus salmonis][more]
gi|19031228|gb|AAL71881.1|1.997e-2152.58trypsin type 7, partial [Lepeophtheirus salmonis][more]
gi|19031224|gb|AAL71879.1|1.065e-2051.55trypsin type 5, partial [Lepeophtheirus salmonis][more]
gi|31563316|gb|AAP55756.1|1.498e-2052.08trypsin 1a [Lepeophtheirus salmonis] >gi|31563318|... [more]
gi|31563322|gb|AAP55759.1|1.521e-2052.08trypsin 1b [Lepeophtheirus salmonis][more]
gi|19031218|gb|AAL71876.1|1.641e-2052.08trypsin type 2, partial [Lepeophtheirus salmonis][more]
gi|19031220|gb|AAL71877.1|1.825e-2052.08trypsin type 3, partial [Lepeophtheirus salmonis][more]
gi|19031216|gb|AAL71875.1|1.908e-2051.04trypsin type 1, partial [Lepeophtheirus salmonis][more]
gi|19031222|gb|AAL71878.1|1.129e-1951.04trypsin type 4, partial [Lepeophtheirus salmonis][more]

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BLAST of EMLSAG00000000024 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1005supercontigLSalAtl2s1005:18324..18734 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1005-snap-gene-0.11
Biotypeprotein_coding
EvidenceIEA
Notetrypsin 1c, partial [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000024 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000024EMLSAT00000000024-695871Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1005:18324..18734-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000024-682790 ID=EMLSAG00000000024-682790|Name=EMLSAG00000000024|organism=Lepeophtheirus salmonis|type=gene|length=411bp|location=Sequence derived from alignment at LSalAtl2s1005:18324..18734- (Lepeophtheirus salmonis)
ATGTTTGGATCCCTGGGCATGAACTATGACATTTGTCTTTTGAAATCAAA
GTCCAGGGAGGACTTCAACGAGTAAAAACTAAATCATACCATTTCTTTTT
TAAATAGTTAATAACTATTGTTTATTAAGTAAAGGCAAGCCTGTTGCTCT
CCCAGAAAATTACCTAGAATTCAACGGTGATGTTGTTTTGACCGGATGGG
GAACTATCTAGTACAGTGGCCCACCTTTTCCAGTCTTTAGGTCAGTTACT
TTCCATGTTGTTTCTGATGATGGAGACAATAAAAATAATATTTATACCTT
GAAAAGAAATTTACATCTATAAATTATATTAAAATAGACTGAAGCGATGC
CCGCTATGGTACTAATGAGACTATGATATGTGCTGCTGCTCCCCGAAAGG
ACTCCTGCCAA
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