EMLSAG00000000092, EMLSAG00000000092-682858 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000092 vs. C. finmarchicus
Match: gi|592873822|gb|GAXK01083740.1| (TSA: Calanus finmarchicus comp177123_c6_seq53 transcribed RNA sequence) HSP 1 Score: 54.299 bits (129), Expect = 1.900e-6 Identity = 22/64 (34.38%), Postives = 31/64 (48.44%), Query Frame = 0 Query: 867 EVVSKLKCPLKNGDGHCIFPFHYKGKVYFTCTKQNYNAYWC-----GKVYTTTNQVWGYCSDEC 925 EVV L + C+FPF ++G+ Y +CT++ + WC G TT WGYC C Sbjct: 1452 EVVQCLTSGGREPGMECVFPFMWRGRQYSSCTREGRDGEWCPTQVHGTTRTTVEGRWGYCGQGC 1643 HSP 2 Score: 37.7354 bits (86), Expect = 2.406e-1 Identity = 17/53 (32.08%), Postives = 26/53 (49.06%), Query Frame = 0 Query: 15 CVFPFEYNGKLHHSCIKDNSHFFWCSKTQKYTGVKTQ-------CDQHCEDLK 60 CVFPF + G+ + SC ++ WC TQ + +T C Q C D++ Sbjct: 1440 CVFPFMWRGRQYSSCTREGRDGEWC-PTQVHGTTRTTVEGRWGYCGQGCGDMQ 1595
BLAST of EMLSAG00000000092 vs. C. finmarchicus
Match: gi|592873813|gb|GAXK01083749.1| (TSA: Calanus finmarchicus comp177123_c6_seq62 transcribed RNA sequence) HSP 1 Score: 53.9138 bits (128), Expect = 2.060e-6 Identity = 22/64 (34.38%), Postives = 31/64 (48.44%), Query Frame = 0 Query: 867 EVVSKLKCPLKNGDGHCIFPFHYKGKVYFTCTKQNYNAYWC-----GKVYTTTNQVWGYCSDEC 925 EVV L + C+FPF ++G+ Y +CT++ + WC G TT WGYC C Sbjct: 1452 EVVQCLTSGGREPGMECVFPFMWRGRQYSSCTREGRDGEWCPTQVHGTTRTTVEGRWGYCGQGC 1643 HSP 2 Score: 37.7354 bits (86), Expect = 1.885e-1 Identity = 17/53 (32.08%), Postives = 26/53 (49.06%), Query Frame = 0 Query: 15 CVFPFEYNGKLHHSCIKDNSHFFWCSKTQKYTGVKTQ-------CDQHCEDLK 60 CVFPF + G+ + SC ++ WC TQ + +T C Q C D++ Sbjct: 1440 CVFPFMWRGRQYSSCTREGRDGEWC-PTQVHGTTRTTVEGRWGYCGQGCGDMQ 1595
BLAST of EMLSAG00000000092 vs. C. finmarchicus
Match: gi|592873857|gb|GAXK01083705.1| (TSA: Calanus finmarchicus comp177123_c6_seq18 transcribed RNA sequence) HSP 1 Score: 54.299 bits (129), Expect = 2.067e-6 Identity = 22/64 (34.38%), Postives = 31/64 (48.44%), Query Frame = 0 Query: 867 EVVSKLKCPLKNGDGHCIFPFHYKGKVYFTCTKQNYNAYWC-----GKVYTTTNQVWGYCSDEC 925 EVV L + C+FPF ++G+ Y +CT++ + WC G TT WGYC C Sbjct: 1452 EVVQCLTSGGREPGMECVFPFMWRGRQYSSCTREGRDGEWCPTQVHGTTRTTVEGRWGYCGQGC 1643 HSP 2 Score: 37.7354 bits (86), Expect = 2.471e-1 Identity = 17/53 (32.08%), Postives = 26/53 (49.06%), Query Frame = 0 Query: 15 CVFPFEYNGKLHHSCIKDNSHFFWCSKTQKYTGVKTQ-------CDQHCEDLK 60 CVFPF + G+ + SC ++ WC TQ + +T C Q C D++ Sbjct: 1440 CVFPFMWRGRQYSSCTREGRDGEWC-PTQVHGTTRTTVEGRWGYCGQGCGDMQ 1595
BLAST of EMLSAG00000000092 vs. C. finmarchicus
Match: gi|592873858|gb|GAXK01083704.1| (TSA: Calanus finmarchicus comp177123_c6_seq17 transcribed RNA sequence) HSP 1 Score: 54.299 bits (129), Expect = 2.077e-6 Identity = 22/64 (34.38%), Postives = 31/64 (48.44%), Query Frame = 0 Query: 867 EVVSKLKCPLKNGDGHCIFPFHYKGKVYFTCTKQNYNAYWC-----GKVYTTTNQVWGYCSDEC 925 EVV L + C+FPF ++G+ Y +CT++ + WC G TT WGYC C Sbjct: 1452 EVVQCLTSGGREPGMECVFPFMWRGRQYSSCTREGRDGEWCPTQVHGTTRTTVEGRWGYCGQGC 1643 HSP 2 Score: 37.7354 bits (86), Expect = 2.479e-1 Identity = 17/53 (32.08%), Postives = 26/53 (49.06%), Query Frame = 0 Query: 15 CVFPFEYNGKLHHSCIKDNSHFFWCSKTQKYTGVKTQ-------CDQHCEDLK 60 CVFPF + G+ + SC ++ WC TQ + +T C Q C D++ Sbjct: 1440 CVFPFMWRGRQYSSCTREGRDGEWC-PTQVHGTTRTTVEGRWGYCGQGCGDMQ 1595
BLAST of EMLSAG00000000092 vs. C. finmarchicus
Match: gi|592873838|gb|GAXK01083724.1| (TSA: Calanus finmarchicus comp177123_c6_seq37 transcribed RNA sequence) HSP 1 Score: 54.299 bits (129), Expect = 2.088e-6 Identity = 22/64 (34.38%), Postives = 31/64 (48.44%), Query Frame = 0 Query: 867 EVVSKLKCPLKNGDGHCIFPFHYKGKVYFTCTKQNYNAYWC-----GKVYTTTNQVWGYCSDEC 925 EVV L + C+FPF ++G+ Y +CT++ + WC G TT WGYC C Sbjct: 2244 EVVQCLTSGGREPGMECVFPFMWRGRQYSSCTREGRDGEWCPTQVHGTTRTTVEGRWGYCGQGC 2435 HSP 2 Score: 37.7354 bits (86), Expect = 2.537e-1 Identity = 17/53 (32.08%), Postives = 26/53 (49.06%), Query Frame = 0 Query: 15 CVFPFEYNGKLHHSCIKDNSHFFWCSKTQKYTGVKTQ-------CDQHCEDLK 60 CVFPF + G+ + SC ++ WC TQ + +T C Q C D++ Sbjct: 2232 CVFPFMWRGRQYSSCTREGRDGEWC-PTQVHGTTRTTVEGRWGYCGQGCGDMQ 2387
BLAST of EMLSAG00000000092 vs. C. finmarchicus
Match: gi|592873839|gb|GAXK01083723.1| (TSA: Calanus finmarchicus comp177123_c6_seq36 transcribed RNA sequence) HSP 1 Score: 54.299 bits (129), Expect = 2.094e-6 Identity = 22/64 (34.38%), Postives = 31/64 (48.44%), Query Frame = 0 Query: 867 EVVSKLKCPLKNGDGHCIFPFHYKGKVYFTCTKQNYNAYWC-----GKVYTTTNQVWGYCSDEC 925 EVV L + C+FPF ++G+ Y +CT++ + WC G TT WGYC C Sbjct: 2276 EVVQCLTSGGREPGMECVFPFMWRGRQYSSCTREGRDGEWCPTQVHGTTRTTVEGRWGYCGQGC 2467 HSP 2 Score: 37.7354 bits (86), Expect = 2.541e-1 Identity = 17/53 (32.08%), Postives = 26/53 (49.06%), Query Frame = 0 Query: 15 CVFPFEYNGKLHHSCIKDNSHFFWCSKTQKYTGVKTQ-------CDQHCEDLK 60 CVFPF + G+ + SC ++ WC TQ + +T C Q C D++ Sbjct: 2264 CVFPFMWRGRQYSSCTREGRDGEWC-PTQVHGTTRTTVEGRWGYCGQGCGDMQ 2419
BLAST of EMLSAG00000000092 vs. C. finmarchicus
Match: gi|592873840|gb|GAXK01083722.1| (TSA: Calanus finmarchicus comp177123_c6_seq35 transcribed RNA sequence) HSP 1 Score: 54.299 bits (129), Expect = 2.101e-6 Identity = 22/64 (34.38%), Postives = 31/64 (48.44%), Query Frame = 0 Query: 867 EVVSKLKCPLKNGDGHCIFPFHYKGKVYFTCTKQNYNAYWC-----GKVYTTTNQVWGYCSDEC 925 EVV L + C+FPF ++G+ Y +CT++ + WC G TT WGYC C Sbjct: 2322 EVVQCLTSGGREPGMECVFPFMWRGRQYSSCTREGRDGEWCPTQVHGTTRTTVEGRWGYCGQGC 2513 HSP 2 Score: 37.7354 bits (86), Expect = 2.546e-1 Identity = 17/53 (32.08%), Postives = 26/53 (49.06%), Query Frame = 0 Query: 15 CVFPFEYNGKLHHSCIKDNSHFFWCSKTQKYTGVKTQ-------CDQHCEDLK 60 CVFPF + G+ + SC ++ WC TQ + +T C Q C D++ Sbjct: 2310 CVFPFMWRGRQYSSCTREGRDGEWC-PTQVHGTTRTTVEGRWGYCGQGCGDMQ 2465
BLAST of EMLSAG00000000092 vs. C. finmarchicus
Match: gi|592873841|gb|GAXK01083721.1| (TSA: Calanus finmarchicus comp177123_c6_seq34 transcribed RNA sequence) HSP 1 Score: 54.299 bits (129), Expect = 2.107e-6 Identity = 22/64 (34.38%), Postives = 31/64 (48.44%), Query Frame = 0 Query: 867 EVVSKLKCPLKNGDGHCIFPFHYKGKVYFTCTKQNYNAYWC-----GKVYTTTNQVWGYCSDEC 925 EVV L + C+FPF ++G+ Y +CT++ + WC G TT WGYC C Sbjct: 2354 EVVQCLTSGGREPGMECVFPFMWRGRQYSSCTREGRDGEWCPTQVHGTTRTTVEGRWGYCGQGC 2545 HSP 2 Score: 37.7354 bits (86), Expect = 2.550e-1 Identity = 17/53 (32.08%), Postives = 26/53 (49.06%), Query Frame = 0 Query: 15 CVFPFEYNGKLHHSCIKDNSHFFWCSKTQKYTGVKTQ-------CDQHCEDLK 60 CVFPF + G+ + SC ++ WC TQ + +T C Q C D++ Sbjct: 2342 CVFPFMWRGRQYSSCTREGRDGEWC-PTQVHGTTRTTVEGRWGYCGQGCGDMQ 2497
BLAST of EMLSAG00000000092 vs. C. finmarchicus
Match: gi|592873859|gb|GAXK01083703.1| (TSA: Calanus finmarchicus comp177123_c6_seq16 transcribed RNA sequence) HSP 1 Score: 54.299 bits (129), Expect = 2.109e-6 Identity = 22/64 (34.38%), Postives = 31/64 (48.44%), Query Frame = 0 Query: 867 EVVSKLKCPLKNGDGHCIFPFHYKGKVYFTCTKQNYNAYWC-----GKVYTTTNQVWGYCSDEC 925 EVV L + C+FPF ++G+ Y +CT++ + WC G TT WGYC C Sbjct: 2322 EVVQCLTSGGREPGMECVFPFMWRGRQYSSCTREGRDGEWCPTQVHGTTRTTVEGRWGYCGQGC 2513 HSP 2 Score: 37.7354 bits (86), Expect = 2.501e-1 Identity = 17/53 (32.08%), Postives = 26/53 (49.06%), Query Frame = 0 Query: 15 CVFPFEYNGKLHHSCIKDNSHFFWCSKTQKYTGVKTQ-------CDQHCEDLK 60 CVFPF + G+ + SC ++ WC TQ + +T C Q C D++ Sbjct: 2310 CVFPFMWRGRQYSSCTREGRDGEWC-PTQVHGTTRTTVEGRWGYCGQGCGDMQ 2465
BLAST of EMLSAG00000000092 vs. C. finmarchicus
Match: gi|592873860|gb|GAXK01083702.1| (TSA: Calanus finmarchicus comp177123_c6_seq15 transcribed RNA sequence) HSP 1 Score: 54.299 bits (129), Expect = 2.110e-6 Identity = 22/64 (34.38%), Postives = 31/64 (48.44%), Query Frame = 0 Query: 867 EVVSKLKCPLKNGDGHCIFPFHYKGKVYFTCTKQNYNAYWC-----GKVYTTTNQVWGYCSDEC 925 EVV L + C+FPF ++G+ Y +CT++ + WC G TT WGYC C Sbjct: 2354 EVVQCLTSGGREPGMECVFPFMWRGRQYSSCTREGRDGEWCPTQVHGTTRTTVEGRWGYCGQGC 2545 HSP 2 Score: 37.7354 bits (86), Expect = 2.502e-1 Identity = 17/53 (32.08%), Postives = 26/53 (49.06%), Query Frame = 0 Query: 15 CVFPFEYNGKLHHSCIKDNSHFFWCSKTQKYTGVKTQ-------CDQHCEDLK 60 CVFPF + G+ + SC ++ WC TQ + +T C Q C D++ Sbjct: 2342 CVFPFMWRGRQYSSCTREGRDGEWC-PTQVHGTTRTTVEGRWGYCGQGCGDMQ 2497
BLAST of EMLSAG00000000092 vs. L. salmonis peptides
Match: EMLSAP00000000092 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1015:165515:192551:-1 gene:EMLSAG00000000092 transcript:EMLSAT00000000092 description:"maker-LSalAtl2s1015-augustus-gene-1.11") HSP 1 Score: 1888.23 bits (4890), Expect = 0.000e+0 Identity = 928/928 (100.00%), Postives = 928/928 (100.00%), Query Frame = 0 Query: 1 LIGLPQNRQLCNENCVFPFEYNGKLHHSCIKDNSHFFWCSKTQKYTGVKTQCDQHCEDLKNAHLPLLEDYLYNSDPYYHDIPCDINCLNKHNVSDNDNPHHDNNMSSSSLSTLLAALNRYRNKEITKELPLFLVHNNSDLNNSTPIMDIPPDDIFFNIESNINSQLDQTNETYAVTQSYYRELTAPSSIKSESDDPTTISIKDILSRILLNRGDTSSHENQKSVTKPVSDEESTTDNLTLTTENHQYLASSSISNSSPGIYLKLTTSTEYPFGHKVINEIDSTVARRYTDSSLHLIPNSVDIHSINPEYEKTTPKTESSPYSKNTDMGLQDELKMDDSKTNEIQSKPQEQVSKITTSITSDNSEVGHNYLETTAASFTRNQMENHIRDSRKDIPFRAIQNQGSTLFNFNSKDIQSTTPKGDVQNVESNIDSPKGSGFATKDNSIRVSTDNILITPNKVTMEPNFRPCDHKDSSTPFLSTTTLINPLNSELSTINEKFSSLSYKYTNNLGQMKIISTTLNTSPSSTESIVTPDKRIQSTSKPLTQTSLTPESKKRANSFRSGQMDFNNIMWLEELLDSDNESEVATTTTSTIWTSENSQETEEYTTAKASPEDESVEPSSRLSTSITRTKSTANEPTTNKIETNTNHSKSNPSTESNSPNKESTKDASRLTTTSDIITTGSKVGITAPLELIMSLINPSYLKSKELSNDEEESIISTTTSFNAILMEETTTLTTFEEPNESFSSTQKQRGAHSLSGITDVPTVPLNFHHKTTTIPKTNKVTNKYTDRITPELSTTPHRAPTQKLKSSTSIMNSPKTESSLMDQLLETLPHATTILKPEMIKSSTRKSTTTLSSTTTTTTMATTLKTTEVVSKLKCPLKNGDGHCIFPFHYKGKVYFTCTKQNYNAYWCGKVYTTTNQVWGYCSDECPRD 928 LIGLPQNRQLCNENCVFPFEYNGKLHHSCIKDNSHFFWCSKTQKYTGVKTQCDQHCEDLKNAHLPLLEDYLYNSDPYYHDIPCDINCLNKHNVSDNDNPHHDNNMSSSSLSTLLAALNRYRNKEITKELPLFLVHNNSDLNNSTPIMDIPPDDIFFNIESNINSQLDQTNETYAVTQSYYRELTAPSSIKSESDDPTTISIKDILSRILLNRGDTSSHENQKSVTKPVSDEESTTDNLTLTTENHQYLASSSISNSSPGIYLKLTTSTEYPFGHKVINEIDSTVARRYTDSSLHLIPNSVDIHSINPEYEKTTPKTESSPYSKNTDMGLQDELKMDDSKTNEIQSKPQEQVSKITTSITSDNSEVGHNYLETTAASFTRNQMENHIRDSRKDIPFRAIQNQGSTLFNFNSKDIQSTTPKGDVQNVESNIDSPKGSGFATKDNSIRVSTDNILITPNKVTMEPNFRPCDHKDSSTPFLSTTTLINPLNSELSTINEKFSSLSYKYTNNLGQMKIISTTLNTSPSSTESIVTPDKRIQSTSKPLTQTSLTPESKKRANSFRSGQMDFNNIMWLEELLDSDNESEVATTTTSTIWTSENSQETEEYTTAKASPEDESVEPSSRLSTSITRTKSTANEPTTNKIETNTNHSKSNPSTESNSPNKESTKDASRLTTTSDIITTGSKVGITAPLELIMSLINPSYLKSKELSNDEEESIISTTTSFNAILMEETTTLTTFEEPNESFSSTQKQRGAHSLSGITDVPTVPLNFHHKTTTIPKTNKVTNKYTDRITPELSTTPHRAPTQKLKSSTSIMNSPKTESSLMDQLLETLPHATTILKPEMIKSSTRKSTTTLSSTTTTTTMATTLKTTEVVSKLKCPLKNGDGHCIFPFHYKGKVYFTCTKQNYNAYWCGKVYTTTNQVWGYCSDECPRD Sbjct: 1 LIGLPQNRQLCNENCVFPFEYNGKLHHSCIKDNSHFFWCSKTQKYTGVKTQCDQHCEDLKNAHLPLLEDYLYNSDPYYHDIPCDINCLNKHNVSDNDNPHHDNNMSSSSLSTLLAALNRYRNKEITKELPLFLVHNNSDLNNSTPIMDIPPDDIFFNIESNINSQLDQTNETYAVTQSYYRELTAPSSIKSESDDPTTISIKDILSRILLNRGDTSSHENQKSVTKPVSDEESTTDNLTLTTENHQYLASSSISNSSPGIYLKLTTSTEYPFGHKVINEIDSTVARRYTDSSLHLIPNSVDIHSINPEYEKTTPKTESSPYSKNTDMGLQDELKMDDSKTNEIQSKPQEQVSKITTSITSDNSEVGHNYLETTAASFTRNQMENHIRDSRKDIPFRAIQNQGSTLFNFNSKDIQSTTPKGDVQNVESNIDSPKGSGFATKDNSIRVSTDNILITPNKVTMEPNFRPCDHKDSSTPFLSTTTLINPLNSELSTINEKFSSLSYKYTNNLGQMKIISTTLNTSPSSTESIVTPDKRIQSTSKPLTQTSLTPESKKRANSFRSGQMDFNNIMWLEELLDSDNESEVATTTTSTIWTSENSQETEEYTTAKASPEDESVEPSSRLSTSITRTKSTANEPTTNKIETNTNHSKSNPSTESNSPNKESTKDASRLTTTSDIITTGSKVGITAPLELIMSLINPSYLKSKELSNDEEESIISTTTSFNAILMEETTTLTTFEEPNESFSSTQKQRGAHSLSGITDVPTVPLNFHHKTTTIPKTNKVTNKYTDRITPELSTTPHRAPTQKLKSSTSIMNSPKTESSLMDQLLETLPHATTILKPEMIKSSTRKSTTTLSSTTTTTTMATTLKTTEVVSKLKCPLKNGDGHCIFPFHYKGKVYFTCTKQNYNAYWCGKVYTTTNQVWGYCSDECPRD 928
BLAST of EMLSAG00000000092 vs. L. salmonis peptides
Match: EMLSAP00000011958 (pep:novel supercontig:LSalAtl2s:LSalAtl2s849:136562:138420:-1 gene:EMLSAG00000011958 transcript:EMLSAT00000011958 description:"maker-LSalAtl2s849-snap-gene-0.23") HSP 1 Score: 51.6026 bits (122), Expect = 6.042e-7 Identity = 28/66 (42.42%), Postives = 40/66 (60.61%), Query Frame = 0 Query: 866 TEV-VSKLKCPLKNGDGHCIFPFHYKGKVYFTCTKQNYNAYWCGKVYTTTNQV--WGYCSDECPRD 928 TEV V++ CP K+GD C+FPF+Y G Y CT ++N WC +T++V +G CS CP + Sbjct: 55 TEVTVTRAGCPTKSGD-RCLFPFNYLGITYNGCTTVDFNIAWCATSIDSTDEVEAYGLCSSSCPAE 119 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000092 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000092 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000000092 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000000092 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000092 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000092 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000092 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1015:165515..192551- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000092-682858 ID=EMLSAG00000000092-682858|Name=EMLSAG00000000092|organism=Lepeophtheirus salmonis|type=gene|length=27037bp|location=Sequence derived from alignment at LSalAtl2s1015:165515..192551- (Lepeophtheirus salmonis)back to top Add to Basket
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