EMLSAG00000000162, EMLSAG00000000162-682928 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000162
Unique NameEMLSAG00000000162-682928
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000000162 vs. GO
Match: - (symbol:ALMS1 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA] [GO:0051492 "regulation of stress fiber assembly" evidence=IEA] InterPro:IPR028781 GO:GO:0005814 GO:GO:0016197 OMA:PSIFYQQ TreeFam:TF335596 GO:GO:0051492 PANTHER:PTHR21553:SF18 GeneTree:ENSGT00550000074751 OrthoDB:EOG754HSH EMBL:DAAA02030350 EMBL:DAAA02030351 Ensembl:ENSBTAT00000047267 Uniprot:E1B958)

HSP 1 Score: 56.6102 bits (135), Expect = 5.830e-7
Identity = 38/127 (29.92%), Postives = 68/127 (53.54%), Query Frame = 0 
Query:  403 LSDSLKKNYPSFLQRSRQRVKLLRESREER----LIEQERKRIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPEVKKVEREIKKKQYHLTNRIMLDIYNRKVKQHLFKRRI 525
            L +SL+ + P F+ RS +R+K L+   +ER    +++ ER+ ++       SP  KR    S++  +  R    KEM++ +KR    LPEV+K   E K++  + + R+   +Y +KV   L  R++
Sbjct: 3164 LQESLQLHRPDFISRSGERIKRLKLIVQERKLQNMLQSEREALF--NTVQFSPLKKR----SFLAAQKKRPVGKKEMIQRSKRIYEQLPEVQKKREEEKRRSEYKSYRLRAQLYKKKVTNQLLGRKV 3284
[Close]
BLAST of EMLSAG00000000162 vs. GO
Match: - (symbol:LOC100857907 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA] [GO:0051492 "regulation of stress fiber assembly" evidence=IEA] GeneTree:ENSGT00550000074751 EMBL:AADN03004372 Ensembl:ENSGALT00000042839 Uniprot:R4GIE3)

HSP 1 Score: 54.299 bits (129), Expect = 2.933e-6
Identity = 42/141 (29.79%), Postives = 66/141 (46.81%), Query Frame = 0 
Query:  394 PPHKNTSLGLSDSLKKNYPSFLQRSRQRVKLLRESREERLIEQERKRIWLXXXATLSPSSKRRA--DISYV-PNRV------VRVFDYKEMVESTKRRCRDLPEVKKVEREIKKKQYHLTNRIMLDIYNRKVKQHLFKRRI 525
            P      L L ++L  + P F+ RS +RVK L+   EER I+     +        +P  KR+   + S+V P R        R     EMV+ +KR    LPEV+K   E K+K  + + R+   +Y  K+  H+  R++
Sbjct: 2721 PTRPTVKLTLQEALAVHRPDFISRSGERVKHLKLVMEERRIQ---SALQSEQEELFNPPEKRKGYRNASHVLPGRGHLIKEKRRAIPKSEMVQRSKRIYEQLPEVQKKREEEKRKSEYNSYRLKAQLYKMKITNHVLGRKV 2858
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BLAST of EMLSAG00000000162 vs. GO
Match: - (symbol:CG12179 species:7227 "Drosophila melanogaster" [GO:0008150 "biological_process" evidence=ND] [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] EMBL:AE014298 FlyBase:FBgn0025388 ChiTaRS:CG12179 EMBL:BT021393 EMBL:BT033060 RefSeq:NP_572175.3 RefSeq:NP_726937.3 UniGene:Dm.38489 IntAct:Q5BI31 MINT:MINT-854051 EnsemblMetazoa:FBtr0300754 EnsemblMetazoa:FBtr0300755 GeneID:31393 KEGG:dme:Dmel_CG12179 UCSC:CG12179-RA UCSC:CG12179-RB GeneTree:ENSGT00540000073831 InParanoid:Q5BI31 OMA:THQYDDV GenomeRNAi:31393 NextBio:773420 Uniprot:Q5BI31)

HSP 1 Score: 52.7582 bits (125), Expect = 8.508e-6
Identity = 33/127 (25.98%), Postives = 63/127 (49.61%), Query Frame = 0 
Query:  403 LSDSLKKNYPSFLQRSRQRVKLLRESREERLIEQERKRIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPEVKKVEREIKKKQYHLTNRIMLDIYNRKVKQHLFKRRIRSAH 529
            L D L+   P F   ++QR  +L E +  R   ++     L    ++   ++    +    N  VR+F  +EM   T +RC++LPEV   +   +++Q   +NR+M D++N+++K  +   +I   H
Sbjct: 1191 LQDQLQLARPEFCANAKQRKAILNEMQMIRNARRQELDNVLSQSTSMEALNRHLEQLPPPANTRVRLFTTREMKAITSKRCKNLPEVLAAQSRQEEEQRRRSNRLMRDVFNKRLKSRVASGQISLNH 1317
[Close]
BLAST of EMLSAG00000000162 vs. GO
Match: - (symbol:ALMS1 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0005814 "centriole" evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA] [GO:0051492 "regulation of stress fiber assembly" evidence=IEA] InterPro:IPR028781 GO:GO:0005814 GO:GO:0016197 TreeFam:TF335596 GO:GO:0051492 PANTHER:PTHR21553:SF18 GeneTree:ENSGT00550000074751 OrthoDB:EOG754HSH EMBL:CU463123 EMBL:CU467704 Ensembl:ENSSSCT00000026747 OMA:DSSEMIR Uniprot:I3LVK9)

HSP 1 Score: 49.6766 bits (117), Expect = 7.801e-5
Identity = 37/133 (27.82%), Postives = 67/133 (50.38%), Query Frame = 0 
Query:  403 LSDSLKKNYPSFLQRSRQRVKLLRESREER----LIEQERKRIWLXXXATLSPSSKRRADISYVPNRVV------RVFDYKEMVESTKRRCRDLPEVKKVEREIKKKQYHLTNRIMLDIYNRKVKQHLFKRRI 525
            L +SL+ + P F+ RS +R+K L+   +ER    +++ ER+ ++     T+      R  +  +P R        R    KEM++ +KR    LPEV+K   E K++  + + R+   +Y +KV   L  R++
Sbjct: 1499 LQESLQLHRPDFISRSGERIKRLKLIVQERKLQNVLQSEREALF----NTVQEWQGCRNPMHQLPKRGFLAAQKKRPVGKKEMIQRSKRIYEQLPEVQKKREEEKRRSEYKSYRLRAQLYKKKVTNQLLGRKV 1627
[Close]
BLAST of EMLSAG00000000162 vs. GO
Match: - (symbol:ALMS1 "Alstrom syndrome protein 1" species:9606 "Homo sapiens" [GO:0000086 "G2/M transition of mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000922 "spindle pole" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND] [GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0005929 "cilium" evidence=IEA] [GO:0016197 "endosomal transport" evidence=IMP] [GO:0051492 "regulation of stress fiber assembly" evidence=IMP] [GO:0005814 "centriole" evidence=IDA] InterPro:IPR028781 EMBL:AJ417593 GO:GO:0005829 Reactome:REACT_115566 GO:GO:0000086 GO:GO:0005813 GO:GO:0005929 GO:GO:0016197 EMBL:AC074008 EMBL:AC092653 EMBL:AC096546 EMBL:AB002326 EMBL:BC035025 EMBL:BC050330 RefSeq:NP_055935.4 UniGene:Hs.184720 ProteinModelPortal:Q8TCU4 BioGrid:113598 IntAct:Q8TCU4 STRING:9606.ENSP00000264448 PhosphoSite:Q8TCU4 DMDM:296439448 PaxDb:Q8TCU4 PRIDE:Q8TCU4 Ensembl:ENST00000264448 GeneID:7840 KEGG:hsa:7840 UCSC:uc002sje.1 UCSC:uc002sjg.3 CTD:7840 GeneCards:GC02P073612 H-InvDB:HIX0002163 HGNC:HGNC:428 HPA:HPA043200 MIM:203800 MIM:606844 neXtProt:NX_Q8TCU4 Orphanet:64 PharmGKB:PA24721 eggNOG:NOG45093 HOGENOM:HOG000089988 HOVERGEN:HBG080834 InParanoid:Q8TCU4 KO:K16741 OMA:PSIFYQQ PhylomeDB:Q8TCU4 TreeFam:TF335596 ChiTaRS:ALMS1 GenomeRNAi:7840 NextBio:30245 PRO:PR:Q8TCU4 ArrayExpress:Q8TCU4 Bgee:Q8TCU4 CleanEx:HS_ALMS1 Genevestigator:Q8TCU4 GO:GO:0000922 GO:GO:0051492 PANTHER:PTHR21553:SF18 Uniprot:Q8TCU4)

HSP 1 Score: 49.6766 bits (117), Expect = 8.842e-5
Identity = 39/135 (28.89%), Postives = 66/135 (48.89%), Query Frame = 0 
Query:  403 LSDSLKKNYPSFLQRSRQRVKLLRESREERLIEQERK---RIWLXXXATLSPSSKRRAD---ISYVPNRVV------RVFDYKEMVESTKRRCRDLPEVKKVEREIKKKQYHLTNRIMLDIYNRKVKQHLFKRRI 525
            L +SL+ + P F+ RS +R+K L+      LI QERK    +     A  +   +R+     +  +P RV       +    KEM++ +KR    LPEV+K   E K+K  + + R+   +Y ++V   L  R++
Sbjct: 4036 LQESLQFHRPDFISRSGERIKRLK------LIVQERKLQSMLQTERDALFNIDRERQGHQNRMCPLPKRVFLAIQKNKPISKKEMIQRSKRIYEQLPEVQKKREEEKRKSEYKSYRLRAQLYKKRVTNQLLGRKV 4164
[Close]
BLAST of EMLSAG00000000162 vs. GO
Match: - (symbol:ALMS1 "Alstrom syndrome protein 1" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR028781 GO:GO:0005737 EMBL:AC074008 EMBL:AC092653 EMBL:AC096546 HGNC:HGNC:428 HOGENOM:HOG000089988 HOVERGEN:HBG080834 ChiTaRS:ALMS1 PANTHER:PTHR21553:SF18 ProteinModelPortal:B8ZZJ3 Ensembl:ENST00000409009 UCSC:uc002sjf.1 OrthoDB:EOG754HSH NextBio:35481791 ArrayExpress:B8ZZJ3 Bgee:B8ZZJ3 Uniprot:B8ZZJ3)

HSP 1 Score: 49.2914 bits (116), Expect = 9.145e-5
Identity = 39/135 (28.89%), Postives = 66/135 (48.89%), Query Frame = 0 
Query:  403 LSDSLKKNYPSFLQRSRQRVKLLRESREERLIEQERK---RIWLXXXATLSPSSKRRAD---ISYVPNRVV------RVFDYKEMVESTKRRCRDLPEVKKVEREIKKKQYHLTNRIMLDIYNRKVKQHLFKRRI 525
            L +SL+ + P F+ RS +R+K L+      LI QERK    +     A  +   +R+     +  +P RV       +    KEM++ +KR    LPEV+K   E K+K  + + R+   +Y ++V   L  R++
Sbjct: 3994 LQESLQFHRPDFISRSGERIKRLK------LIVQERKLQSMLQTERDALFNIDRERQGHQNRMCPLPKRVFLAIQKNKPISKKEMIQRSKRIYEQLPEVQKKREEEKRKSEYKSYRLRAQLYKKRVTNQLLGRKV 4122
[Close]
BLAST of EMLSAG00000000162 vs. GO
Match: - (symbol:ALMS1 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0005814 "centriole" evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA] [GO:0051492 "regulation of stress fiber assembly" evidence=IEA] InterPro:IPR028781 GO:GO:0005814 GO:GO:0016197 OMA:PSIFYQQ TreeFam:TF335596 GO:GO:0051492 PANTHER:PTHR21553:SF18 GeneTree:ENSGT00550000074751 OrthoDB:EOG754HSH EMBL:AAEX03010974 Ensembl:ENSCAFT00000014029 Uniprot:E2RS22)

HSP 1 Score: 46.9802 bits (110), Expect = 5.469e-4
Identity = 36/133 (27.07%), Postives = 64/133 (48.12%), Query Frame = 0 
Query:  403 LSDSLKKNYPSFLQRSRQRVKLLRESREER----LIEQERK------RIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPEVKKVEREIKKKQYHLTNRIMLDIYNRKVKQHLFKRRI 525
            L +SL  + P F+ RS +R+K L+   +ER    ++E ER+      R W           K+     ++  R  R    KEM++ +KR    LPEV++   E K++  + + R+   ++ +KV   L  R++
Sbjct: 3710 LQESLHLHRPDFISRSGERIKRLKLIVQERKLQNMLESEREALFNVSREWQGYRDPTHLLPKK----GFLDARKSRPIGKKEMIQRSKRIYEQLPEVQRKREEEKRRLEYKSYRLRAQLFKKKVTNQLLGRKV 3838
[Close]
BLAST of EMLSAG00000000162 vs. C. finmarchicus
Match: gi|592869448|gb|GAXK01088114.1| (TSA: Calanus finmarchicus comp158062_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 74.3294 bits (181), Expect = 5.012e-13
Identity = 65/227 (28.63%), Postives = 124/227 (54.63%), Query Frame = 0 
Query:  312 RSSTLSQNKSTTXSDSRRKVNSFYSLEVSSKPPVNSKGNRMVSE-----KDFFVSKENRNIISNHIAGLNLGPIKKSINSHYQHGDSPPHKNT----SLGLSDSLKKNYPSFLQRSRQXXXXXXXXXXXXXXXXXXKRIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPXXXXXXXXXXXXQYHLTNRIMLDIYNRKVKQHLFKRRIRSAH 529
            ++S   Q +S   S +++K  ++Y L + S  P+   G R++ E     ++ F S +NRNI+S++IA L+  PI +      Q    PP + T     + L ++L +    FL     R+  L +++E R +   ++  WL   A  SP S+R A+ S+ P  VVRVF++++MV +T+ +  +LPE++ ++++ +K   H  NR+M  IY+ ++++   + ++   H
Sbjct: 1774 KNSPRKQRRSLPESVAKQKPVAYY-LPMDSLSPIRI-GRRVLREITGDTENVFHSLDNRNILSSYIASLDTQPIVR------QPQQLPPVQKTFRPNKMSLQEALFQRRKDFLTHCEARMAALSKAKEARKLRSSKQAAWLEEVACQSPRSRRMAEPSFTPVPVVRVFNHRDMVMATREKYNELPEIQNMKQDTRKSGKHRLNRLMAQIYSSRLQRKAVRGKVSLTH 2430
[Close]
BLAST of EMLSAG00000000162 vs. C. finmarchicus
Match: gi|592869449|gb|GAXK01088113.1| (TSA: Calanus finmarchicus comp158062_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 74.3294 bits (181), Expect = 5.012e-13
Identity = 65/227 (28.63%), Postives = 124/227 (54.63%), Query Frame = 0 
Query:  312 RSSTLSQNKSTTXSDSRRKVNSFYSLEVSSKPPVNSKGNRMVSE-----KDFFVSKENRNIISNHIAGLNLGPIKKSINSHYQHGDSPPHKNT----SLGLSDSLKKNYPSFLQRSRQXXXXXXXXXXXXXXXXXXKRIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPXXXXXXXXXXXXQYHLTNRIMLDIYNRKVKQHLFKRRIRSAH 529
            ++S   Q +S   S +++K  ++Y L + S  P+   G R++ E     ++ F S +NRNI+S++IA L+  PI +      Q    PP + T     + L ++L +    FL     R+  L +++E R +   ++  WL   A  SP S+R A+ S+ P  VVRVF++++MV +T+ +  +LPE++ ++++ +K   H  NR+M  IY+ ++++   + ++   H
Sbjct: 1774 KNSPRKQRRSLPESVAKQKPVAYY-LPMDSLSPIRI-GRRVLREITGDTENVFHSLDNRNILSSYIASLDTQPIVR------QPQQLPPVQKTFRPNKMSLQEALFQRRKDFLTHCEARMAALSKAKEARKLRSSKQAAWLEEVACQSPRSRRMAEPSFTPVPVVRVFNHRDMVMATREKYNELPEIQNMKQDTRKSGKHRLNRLMAQIYSSRLQRKAVRGKVSLTH 2430
[Close]
BLAST of EMLSAG00000000162 vs. C. finmarchicus
Match: gi|592869439|gb|GAXK01088123.1| (TSA: Calanus finmarchicus comp158062_c1_seq11 transcribed RNA sequence)

HSP 1 Score: 73.9442 bits (180), Expect = 5.490e-13
Identity = 65/227 (28.63%), Postives = 123/227 (54.19%), Query Frame = 0 
Query:  312 RSSTLSQNKSTTXSDSRRKVNSFYSLEVSSKPPVNSKGNRMVSE-----KDFFVSKENRNIISNHIAGLNLGPIKKSINSHYQHGDSPPHKNT----SLGLSDSLKKNYPSFLQRSRQXXXXXXXXXXXXXXXXXXKRIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPXXXXXXXXXXXXQYHLTNRIMLDIYNRKVKQHLFKRRIRSAH 529
            ++S   Q +S   S +++K  ++Y L + S  P+   G R++ E     ++ F S  NRNI+S++IA L+  PI +      Q    PP + T     + L ++L +    FL     R+  L +++E R +   ++  WL   A  SP S+R A+ S+ P  VVRVF++++MV +T+ +  +LPE++ ++++ +K   H  NR+M  IY+ ++++   + ++   H
Sbjct: 1011 KNSPRKQRRSLPESVAKQKPVAYY-LPMDSLSPIRI-GRRVLREITGDTENVFHSDTNRNILSSYIASLDTQPIVR------QPQQLPPVQKTFRPNKMSLQEALFQRRKDFLTHCEARMAALSKAKEARKLRSSKQAAWLEEVACQSPRSRRMAEPSFTPVPVVRVFNHRDMVMATREKYNELPEIQNMKQDTRKSGKHRLNRLMAQIYSSRLQRKAVRGKVSLTH 1667
[Close]
BLAST of EMLSAG00000000162 vs. C. finmarchicus
Match: gi|592869440|gb|GAXK01088122.1| (TSA: Calanus finmarchicus comp158062_c1_seq10 transcribed RNA sequence)

HSP 1 Score: 73.9442 bits (180), Expect = 5.490e-13
Identity = 65/227 (28.63%), Postives = 123/227 (54.19%), Query Frame = 0 
Query:  312 RSSTLSQNKSTTXSDSRRKVNSFYSLEVSSKPPVNSKGNRMVSE-----KDFFVSKENRNIISNHIAGLNLGPIKKSINSHYQHGDSPPHKNT----SLGLSDSLKKNYPSFLQRSRQXXXXXXXXXXXXXXXXXXKRIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPXXXXXXXXXXXXQYHLTNRIMLDIYNRKVKQHLFKRRIRSAH 529
            ++S   Q +S   S +++K  ++Y L + S  P+   G R++ E     ++ F S  NRNI+S++IA L+  PI +      Q    PP + T     + L ++L +    FL     R+  L +++E R +   ++  WL   A  SP S+R A+ S+ P  VVRVF++++MV +T+ +  +LPE++ ++++ +K   H  NR+M  IY+ ++++   + ++   H
Sbjct: 1011 KNSPRKQRRSLPESVAKQKPVAYY-LPMDSLSPIRI-GRRVLREITGDTENVFHSDTNRNILSSYIASLDTQPIVR------QPQQLPPVQKTFRPNKMSLQEALFQRRKDFLTHCEARMAALSKAKEARKLRSSKQAAWLEEVACQSPRSRRMAEPSFTPVPVVRVFNHRDMVMATREKYNELPEIQNMKQDTRKSGKHRLNRLMAQIYSSRLQRKAVRGKVSLTH 1667
[Close]
BLAST of EMLSAG00000000162 vs. C. finmarchicus
Match: gi|592869441|gb|GAXK01088121.1| (TSA: Calanus finmarchicus comp158062_c1_seq9 transcribed RNA sequence)

HSP 1 Score: 73.9442 bits (180), Expect = 5.512e-13
Identity = 65/227 (28.63%), Postives = 123/227 (54.19%), Query Frame = 0 
Query:  312 RSSTLSQNKSTTXSDSRRKVNSFYSLEVSSKPPVNSKGNRMVSE-----KDFFVSKENRNIISNHIAGLNLGPIKKSINSHYQHGDSPPHKNT----SLGLSDSLKKNYPSFLQRSRQXXXXXXXXXXXXXXXXXXKRIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPXXXXXXXXXXXXQYHLTNRIMLDIYNRKVKQHLFKRRIRSAH 529
            ++S   Q +S   S +++K  ++Y L + S  P+   G R++ E     ++ F S  NRNI+S++IA L+  PI +      Q    PP + T     + L ++L +    FL     R+  L +++E R +   ++  WL   A  SP S+R A+ S+ P  VVRVF++++MV +T+ +  +LPE++ ++++ +K   H  NR+M  IY+ ++++   + ++   H
Sbjct: 1022 KNSPRKQRRSLPESVAKQKPVAYY-LPMDSLSPIRI-GRRVLREITGDTENVFHSDTNRNILSSYIASLDTQPIVR------QPQQLPPVQKTFRPNKMSLQEALFQRRKDFLTHCEARMAALSKAKEARKLRSSKQAAWLEEVACQSPRSRRMAEPSFTPVPVVRVFNHRDMVMATREKYNELPEIQNMKQDTRKSGKHRLNRLMAQIYSSRLQRKAVRGKVSLTH 1678
[Close]
BLAST of EMLSAG00000000162 vs. C. finmarchicus
Match: gi|592869442|gb|GAXK01088120.1| (TSA: Calanus finmarchicus comp158062_c1_seq8 transcribed RNA sequence)

HSP 1 Score: 73.9442 bits (180), Expect = 5.512e-13
Identity = 65/227 (28.63%), Postives = 123/227 (54.19%), Query Frame = 0 
Query:  312 RSSTLSQNKSTTXSDSRRKVNSFYSLEVSSKPPVNSKGNRMVSE-----KDFFVSKENRNIISNHIAGLNLGPIKKSINSHYQHGDSPPHKNT----SLGLSDSLKKNYPSFLQRSRQXXXXXXXXXXXXXXXXXXKRIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPXXXXXXXXXXXXQYHLTNRIMLDIYNRKVKQHLFKRRIRSAH 529
            ++S   Q +S   S +++K  ++Y L + S  P+   G R++ E     ++ F S  NRNI+S++IA L+  PI +      Q    PP + T     + L ++L +    FL     R+  L +++E R +   ++  WL   A  SP S+R A+ S+ P  VVRVF++++MV +T+ +  +LPE++ ++++ +K   H  NR+M  IY+ ++++   + ++   H
Sbjct: 1022 KNSPRKQRRSLPESVAKQKPVAYY-LPMDSLSPIRI-GRRVLREITGDTENVFHSDTNRNILSSYIASLDTQPIVR------QPQQLPPVQKTFRPNKMSLQEALFQRRKDFLTHCEARMAALSKAKEARKLRSSKQAAWLEEVACQSPRSRRMAEPSFTPVPVVRVFNHRDMVMATREKYNELPEIQNMKQDTRKSGKHRLNRLMAQIYSSRLQRKAVRGKVSLTH 1678
[Close]
BLAST of EMLSAG00000000162 vs. C. finmarchicus
Match: gi|592869446|gb|GAXK01088116.1| (TSA: Calanus finmarchicus comp158062_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 73.9442 bits (180), Expect = 6.766e-13
Identity = 65/227 (28.63%), Postives = 123/227 (54.19%), Query Frame = 0 
Query:  312 RSSTLSQNKSTTXSDSRRKVNSFYSLEVSSKPPVNSKGNRMVSE-----KDFFVSKENRNIISNHIAGLNLGPIKKSINSHYQHGDSPPHKNT----SLGLSDSLKKNYPSFLQRSRQXXXXXXXXXXXXXXXXXXKRIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPXXXXXXXXXXXXQYHLTNRIMLDIYNRKVKQHLFKRRIRSAH 529
            ++S   Q +S   S +++K  ++Y L + S  P+   G R++ E     ++ F S  NRNI+S++IA L+  PI +      Q    PP + T     + L ++L +    FL     R+  L +++E R +   ++  WL   A  SP S+R A+ S+ P  VVRVF++++MV +T+ +  +LPE++ ++++ +K   H  NR+M  IY+ ++++   + ++   H
Sbjct: 1708 KNSPRKQRRSLPESVAKQKPVAYY-LPMDSLSPIRI-GRRVLREITGDTENVFHSDTNRNILSSYIASLDTQPIVR------QPQQLPPVQKTFRPNKMSLQEALFQRRKDFLTHCEARMAALSKAKEARKLRSSKQAAWLEEVACQSPRSRRMAEPSFTPVPVVRVFNHRDMVMATREKYNELPEIQNMKQDTRKSGKHRLNRLMAQIYSSRLQRKAVRGKVSLTH 2364
[Close]
BLAST of EMLSAG00000000162 vs. C. finmarchicus
Match: gi|592869447|gb|GAXK01088115.1| (TSA: Calanus finmarchicus comp158062_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 73.9442 bits (180), Expect = 6.766e-13
Identity = 65/227 (28.63%), Postives = 123/227 (54.19%), Query Frame = 0 
Query:  312 RSSTLSQNKSTTXSDSRRKVNSFYSLEVSSKPPVNSKGNRMVSE-----KDFFVSKENRNIISNHIAGLNLGPIKKSINSHYQHGDSPPHKNT----SLGLSDSLKKNYPSFLQRSRQXXXXXXXXXXXXXXXXXXKRIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPXXXXXXXXXXXXQYHLTNRIMLDIYNRKVKQHLFKRRIRSAH 529
            ++S   Q +S   S +++K  ++Y L + S  P+   G R++ E     ++ F S  NRNI+S++IA L+  PI +      Q    PP + T     + L ++L +    FL     R+  L +++E R +   ++  WL   A  SP S+R A+ S+ P  VVRVF++++MV +T+ +  +LPE++ ++++ +K   H  NR+M  IY+ ++++   + ++   H
Sbjct: 1708 KNSPRKQRRSLPESVAKQKPVAYY-LPMDSLSPIRI-GRRVLREITGDTENVFHSDTNRNILSSYIASLDTQPIVR------QPQQLPPVQKTFRPNKMSLQEALFQRRKDFLTHCEARMAALSKAKEARKLRSSKQAAWLEEVACQSPRSRRMAEPSFTPVPVVRVFNHRDMVMATREKYNELPEIQNMKQDTRKSGKHRLNRLMAQIYSSRLQRKAVRGKVSLTH 2364
[Close]
BLAST of EMLSAG00000000162 vs. C. finmarchicus
Match: gi|592869425|gb|GAXK01088137.1| (TSA: Calanus finmarchicus comp158062_c1_seq25 transcribed RNA sequence)

HSP 1 Score: 56.225 bits (134), Expect = 3.683e-8
Identity = 47/165 (28.48%), Postives = 92/165 (55.76%), Query Frame = 0 
Query:  369 SNHIAGLNLGPIKKSINSHYQHGDSPPHKNT----SLGLSDSLKKNYPSFLQRSRQXXXXXXXXXXXXXXXXXXKRIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPXXXXXXXXXXXXQYHLTNRIMLDIYNRKVKQHLFKRRIRSAH 529
            S++IA L+  P+ +      Q    PP + T     + L ++L +    FL+    R+  L +++E R++   ++  WL   A  SP S+R A+ S+ P  VVRVF++++MV +T+ +  +LPE++ ++++ KK   H  NR+M  IY+ ++++   + ++   H
Sbjct:    1 SSYIASLDPQPLVR------QPQQLPPVQKTFRPNKMSLQEALLQRRKDFLKHCEARMAALHKAKEARILRSSKQAAWLEEVACQSPRSRRMAEPSFTPVPVVRVFNHRDMVMATREKYNELPEIQNMKQDTKKSGKHRLNRLMAQIYSSRLQRKAVRGKVSLTH 477
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BLAST of EMLSAG00000000162 vs. C. finmarchicus
Match: gi|592869426|gb|GAXK01088136.1| (TSA: Calanus finmarchicus comp158062_c1_seq24 transcribed RNA sequence)

HSP 1 Score: 56.225 bits (134), Expect = 3.683e-8
Identity = 47/165 (28.48%), Postives = 92/165 (55.76%), Query Frame = 0 
Query:  369 SNHIAGLNLGPIKKSINSHYQHGDSPPHKNT----SLGLSDSLKKNYPSFLQRSRQXXXXXXXXXXXXXXXXXXKRIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPXXXXXXXXXXXXQYHLTNRIMLDIYNRKVKQHLFKRRIRSAH 529
            S++IA L+  P+ +      Q    PP + T     + L ++L +    FL+    R+  L +++E R++   ++  WL   A  SP S+R A+ S+ P  VVRVF++++MV +T+ +  +LPE++ ++++ KK   H  NR+M  IY+ ++++   + ++   H
Sbjct:    1 SSYIASLDPQPLVR------QPQQLPPVQKTFRPNKMSLQEALLQRRKDFLKHCEARMAALHKAKEARILRSSKQAAWLEEVACQSPRSRRMAEPSFTPVPVVRVFNHRDMVMATREKYNELPEIQNMKQDTKKSGKHRLNRLMAQIYSSRLQRKAVRGKVSLTH 477
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BLAST of EMLSAG00000000162 vs. L. salmonis peptides
Match: EMLSAP00000000162 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1025:111258:112847:-1 gene:EMLSAG00000000162 transcript:EMLSAT00000000162 description:"augustus_masked-LSalAtl2s1025-processed-gene-0.11")

HSP 1 Score: 1059.67 bits (2739), Expect = 0.000e+0
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 0 
Query:    1 MKQKLAGKLMKFMKDEEVGCNESDSPHSTSSLKLEHEIQKLDKLERKLLKCVPSLSLYKSDISLTSDNSSVRDTPNKNFTLQISSSHTSISSSKSNHELSESGCSSSDTQTCESSSVAVANDPSQITSLTMTTSHVTQVLQQNVLHPDRQLTSSNRXPTKTSIEKDISYKSTDNILSLSEDDDHQSEKKSVVSNENTEGRSEEIRSSSRHGLCWTSKSDFGQTYPSPKDLLAEDKILCQKASFLPSTESEFKQTCPSYKDVALDIRSSSESSSSISSRSLDKKYYHSHRNTAFINRTSNVKMDSHCEVNLKRSSTLSQNKSTTXSDSRRKVNSFYSLEVSSKPPVNSKGNRMVSEKDFFVSKENRNIISNHIAGLNLGPIKKSINSHYQHGDSPPHKNTSLGLSDSLKKNYPSFLQRSRQRVKLLRESREERLIEQERKRIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPEVKKVEREIKKKQYHLTNRIMLDIYNRKVKQHLFKRRIRSAH 529
            MKQKLAGKLMKFMKDEEVGCNESDSPHSTSSLKLEHEIQKLDKLERKLLKCVPSLSLYKSDISLTSDNSSVRDTPNKNFTLQISSSHTSISSSKSNHELSESGCSSSDTQTCESSSVAVANDPSQITSLTMTTSHVTQVLQQNVLHPDRQLTSSNRXPTKTSIEKDISYKSTDNILSLSEDDDHQSEKKSVVSNENTEGRSEEIRSSSRHGLCWTSKSDFGQTYPSPKDLLAEDKILCQKASFLPSTESEFKQTCPSYKDVALDIRSSSESSSSISSRSLDKKYYHSHRNTAFINRTSNVKMDSHCEVNLKRSSTLSQNKSTTXSDSRRKVNSFYSLEVSSKPPVNSKGNRMVSEKDFFVSKENRNIISNHIAGLNLGPIKKSINSHYQHGDSPPHKNTSLGLSDSLKKNYPSFLQRSRQRVKLLRESREERLIEQERKRIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPEVKKVEREIKKKQYHLTNRIMLDIYNRKVKQHLFKRRIRSAH
Sbjct:    1 MKQKLAGKLMKFMKDEEVGCNESDSPHSTSSLKLEHEIQKLDKLERKLLKCVPSLSLYKSDISLTSDNSSVRDTPNKNFTLQISSSHTSISSSKSNHELSESGCSSSDTQTCESSSVAVANDPSQITSLTMTTSHVTQVLQQNVLHPDRQLTSSNRXPTKTSIEKDISYKSTDNILSLSEDDDHQSEKKSVVSNENTEGRSEEIRSSSRHGLCWTSKSDFGQTYPSPKDLLAEDKILCQKASFLPSTESEFKQTCPSYKDVALDIRSSSESSSSISSRSLDKKYYHSHRNTAFINRTSNVKMDSHCEVNLKRSSTLSQNKSTTXSDSRRKVNSFYSLEVSSKPPVNSKGNRMVSEKDFFVSKENRNIISNHIAGLNLGPIKKSINSHYQHGDSPPHKNTSLGLSDSLKKNYPSFLQRSRQRVKLLRESREERLIEQERKRIWLXXXATLSPSSKRRADISYVPNRVVRVFDYKEMVESTKRRCRDLPEVKKVEREIKKKQYHLTNRIMLDIYNRKVKQHLFKRRIRSAH 529
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000162 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 7
Match NameE-valueIdentityDescription
-5.830e-729.92symbol:ALMS1 "Uncharacterized protein" species:991... [more]
-2.933e-629.79symbol:LOC100857907 "Uncharacterized protein" spec... [more]
-8.508e-625.98symbol:CG12179 species:7227 "Drosophila melanogast... [more]
-7.801e-527.82symbol:ALMS1 "Uncharacterized protein" species:982... [more]
-8.842e-528.89symbol:ALMS1 "Alstrom syndrome protein 1" species:... [more]
-9.145e-528.89symbol:ALMS1 "Alstrom syndrome protein 1" species:... [more]
-5.469e-427.07symbol:ALMS1 "Uncharacterized protein" species:961... [more]
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BLAST of EMLSAG00000000162 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 10
Match NameE-valueIdentityDescription
gi|592869448|gb|GAXK01088114.1|5.012e-1328.63TSA: Calanus finmarchicus comp158062_c1_seq2 trans... [more]
gi|592869449|gb|GAXK01088113.1|5.012e-1328.63TSA: Calanus finmarchicus comp158062_c1_seq1 trans... [more]
gi|592869439|gb|GAXK01088123.1|5.490e-1328.63TSA: Calanus finmarchicus comp158062_c1_seq11 tran... [more]
gi|592869440|gb|GAXK01088122.1|5.490e-1328.63TSA: Calanus finmarchicus comp158062_c1_seq10 tran... [more]
gi|592869441|gb|GAXK01088121.1|5.512e-1328.63TSA: Calanus finmarchicus comp158062_c1_seq9 trans... [more]
gi|592869442|gb|GAXK01088120.1|5.512e-1328.63TSA: Calanus finmarchicus comp158062_c1_seq8 trans... [more]
gi|592869446|gb|GAXK01088116.1|6.766e-1328.63TSA: Calanus finmarchicus comp158062_c1_seq4 trans... [more]
gi|592869447|gb|GAXK01088115.1|6.766e-1328.63TSA: Calanus finmarchicus comp158062_c1_seq3 trans... [more]
gi|592869425|gb|GAXK01088137.1|3.683e-828.48TSA: Calanus finmarchicus comp158062_c1_seq25 tran... [more]
gi|592869426|gb|GAXK01088136.1|3.683e-828.48TSA: Calanus finmarchicus comp158062_c1_seq24 tran... [more]
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BLAST of EMLSAG00000000162 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000001620.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1025:1112... [more]
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BLAST of EMLSAG00000000162 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000162 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000162 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000162 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1025supercontigLSalAtl2s1025:111258..112847 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s1025-processed-gene-0.11
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000162 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000162EMLSAT00000000162-696009Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1025:111258..112847-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000162-682928 ID=EMLSAG00000000162-682928|Name=EMLSAG00000000162|organism=Lepeophtheirus salmonis|type=gene|length=1590bp|location=Sequence derived from alignment at LSalAtl2s1025:111258..112847- (Lepeophtheirus salmonis)
ATGAAGCAGAAACTTGCAGGAAAATTAATGAAATTCATGAAAGATGAAGA
AGTTGGTTGTAACGAGAGTGACTCCCCACATTCCACTTCATCCTTGAAAC
TTGAGCACGAAATTCAAAAATTAGATAAACTCGAGCGCAAGCTTTTGAAA
TGTGTACCTTCACTGTCTTTATACAAATCGGATATTTCTCTAACCTCTGA
CAACTCTTCAGTCAGAGACACACCCAATAAAAATTTCACCCTCCAAATAT
CTTCATCCCATACATCGATTTCCTCCTCAAAATCAAATCATGAATTAAGT
GAATCAGGTTGCTCTTCAAGCGATACACAAACGTGTGAATCCTCCTCTGT
TGCCGTTGCTAATGATCCTAGCCAAATCACTTCTTTAACCATGACTACTT
CTCATGTTACACAGGTACTGCAGCAAAATGTTTTACATCCCGATCGGCAG
TTAACTTCTTCGAATCGGGMTCCGACTAAAACTTCTATAGAAAAGGATAT
ATCATATAAATCAACTGACAATATTTTATCACTCTCTGAAGATGATGATC
ATCAGTCAGAGAAAAAAAGTGTTGTTTCGAATGAAAACACTGAAGGCAGA
TCAGAAGAAATACGATCCTCCTCTCGACATGGATTATGTTGGACATCGAA
ATCTGATTTTGGACAAACCTACCCATCCCCTAAGGACTTACTAGCTGAAG
ACAAAATATTATGTCAAAAAGCCTCTTTTCTCCCTTCTACAGAATCGGAA
TTTAAACAAACATGTCCTTCATACAAGGATGTGGCTCTGGATATTAGAAG
TAGTAGTGAATCTTCTTCTTCTATATCCTCACGATCATTAGACAAAAAAT
ATTATCACTCTCACAGAAACACGGCCTTTATAAATCGCACGTCTAACGTA
AAAATGGATTCTCATTGCGAAGTTAATCTTAAGCGCAGTTCAACTTTATC
TCAAAATAAAAGTACGACAWTGTCTGATTCCCGCCGTAAAGTAAATTCCT
TTTATTCCTTAGAAGTAAGTTCTAAACCCCCTGTAAACAGTAAAGGAAAT
CGAATGGTTAGCGAAAAGGACTTTTTTGTTTCCAAAGAAAATCGTAATAT
CATTTCCAACCATATAGCTGGATTAAACTTAGGTCCAATCAAAAAAAGCA
TCAATAGTCATTATCAACATGGTGACAGTCCACCTCATAAGAATACATCT
CTAGGTCTCTCAGACTCTCTTAAGAAGAACTATCCTAGCTTTCTCCAGAG
ATCACGTCAAAGAGTTAAGCTTCTTCGAGAATCCAGGGAAGAACGTTTGA
TAGAGCAGGAAAGGAAAAGGATATGGCTTRAAAAWWTAGCCACTCTTTCA
CCCTCKTCCAAGAGAAGGGCTGATATCTCTTACGTTCCAAATAGAGTCGT
CAGAGTATTCGACTATAAGGAAATGGTGGAGAGCACTAAGAGGCGATGTC
GGGATTTACCTGAAGTGAAGAAAGTTGAAAGAGAAATAAAGAAAAAACAG
TATCATCTTACCAACAGAATTATGCTTGATATATACAATCGAAAAGTGAA
GCAACATCTCTTTAAAAGAAGGATTCGTTCAGCTCATTAA
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