EMLSAG00000000174, EMLSAG00000000174-682940 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000174
Unique NameEMLSAG00000000174-682940
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000000174 vs. GO
Match: - (symbol:An15g06200 "Putative uncharacterized protein An15g06200" species:425011 "Aspergillus niger CBS 513.88" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR001841 InterPro:IPR001878 InterPro:IPR002867 Pfam:PF01485 SMART:SM00184 SMART:SM00343 SMART:SM00647 GO:GO:0008270 GO:GO:0003676 EMBL:AM270347 ProteinModelPortal:A2R605 EnsemblFungi:CADANGAT00012299 OrthoDB:EOG722JHZ Uniprot:A2R605)

HSP 1 Score: 43.5134 bits (101), Expect = 1.180e-4
Identity = 23/50 (46.00%), Postives = 28/50 (56.00%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCI-CGAQMCYICKKKI-QPNYDHF 48
            M+ A+ R C  C     K  GCN++ C  C   MCYICKK I +  YDHF
Sbjct:  486 MSKALIRPCPKCNVKIVKESGCNKMICSKCRTSMCYICKKDITREKYDHF 535
[Close]
BLAST of EMLSAG00000000174 vs. GO
Match: - (symbol:An15g06200 species:5061 "Aspergillus niger" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR001841 InterPro:IPR001878 InterPro:IPR002867 Pfam:PF01485 SMART:SM00184 SMART:SM00343 SMART:SM00647 GO:GO:0008270 GO:GO:0003676 EMBL:AM270347 ProteinModelPortal:A2R605 EnsemblFungi:CADANGAT00012299 OrthoDB:EOG722JHZ Uniprot:A2R605)

HSP 1 Score: 43.5134 bits (101), Expect = 1.180e-4
Identity = 23/50 (46.00%), Postives = 28/50 (56.00%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCI-CGAQMCYICKKKI-QPNYDHF 48
            M+ A+ R C  C     K  GCN++ C  C   MCYICKK I +  YDHF
Sbjct:  486 MSKALIRPCPKCNVKIVKESGCNKMICSKCRTSMCYICKKDITREKYDHF 535
[Close]
BLAST of EMLSAG00000000174 vs. GO
Match: - (symbol:orf19.5942 species:5476 "Candida albicans" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006449 "regulation of translational termination" evidence=IEA] InterPro:IPR001841 InterPro:IPR002867 InterPro:IPR006575 Pfam:PF01485 Pfam:PF05773 PROSITE:PS50089 PROSITE:PS50908 SMART:SM00591 SMART:SM00647 CGD:CAL0003348 Prosite:PS00518 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR017907 EMBL:AACQ01000004 EMBL:AACQ01000003 eggNOG:NOG266709 KO:K11971 OrthoDB:EOG77WWNJ RefSeq:XP_723007.1 RefSeq:XP_723154.1 STRING:5476.CAL0003348 GeneID:3635215 GeneID:3635425 KEGG:cal:CaO19.13363 KEGG:cal:CaO19.5942 Uniprot:Q5ANG1)

HSP 1 Score: 40.817 bits (94), Expect = 8.652e-4
Identity = 19/49 (38.78%), Postives = 29/49 (59.18%), Query Frame = 0 
Query:    8 KCHACAKPYTKTDGCNRIQC-ICGAQMCYICKKKIQPNYDHFYDFPEKP 55
            +C  C+    K++GCN+++C +C    C+ C  KI  N+DHF D P  P
Sbjct:  420 QCPGCSVATEKSEGCNKMKCSLCKTDFCFNCGSKIGNNHDHFVD-PSSP 467
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BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592923318|gb|GAXK01035097.1| (TSA: Calanus finmarchicus comp110292_c2_seq2 transcribed RNA sequence)

HSP 1 Score: 78.5666 bits (192), Expect = 6.652e-17
Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQ 88
            M  A+ R C  C K + K +GCN++QC CG  MCY+C+K ++ +Y HFY     P  GKCPL +++ +LH  E   AA + +   D +
Sbjct: 1453 MTEAMVRACVRCKKRFFKDEGCNKMQCECGQSMCYLCRKPVENDYTHFYAQGASPVKGKCPLWSDNINLHKAEVMKAAEEAKKAVDGK 1716
[Close]
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592923319|gb|GAXK01035096.1| (TSA: Calanus finmarchicus comp110292_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 78.1814 bits (191), Expect = 7.661e-17
Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQ 88
            M  A+ R C  C K + K +GCN++QC CG  MCY+C+K ++ +Y HFY     P  GKCPL +++ +LH  E   AA + +   D +
Sbjct: 1468 MTEAMVRACVRCKKRFYKDEGCNKMQCECGQSMCYLCRKPVENDYTHFYAQGASPVKGKCPLWSDNINLHKAEVMKAAEEAKKAVDGK 1731
[Close]
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592942599|gb|GAXK01015954.1| (TSA: Calanus finmarchicus comp204909_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 75.0998 bits (183), Expect = 1.069e-16
Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKP-EIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPR 93
            ++ A+ R+C  C K + K +GCNR+ C CGAQMCY+CK K+  +YDHFY    +P    KCPL ++++ LH  E ++AA K +        L R
Sbjct:  355 LSLAMLRQCWQCKKMFYKEEGCNRMTCTCGAQMCYLCKVKV-SSYDHFYGQGGQPTSEKKCPLWSDNKALHRQEVSAAAVKAKEELALSNDLSR 633
[Close]
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592942600|gb|GAXK01015953.1| (TSA: Calanus finmarchicus comp204909_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 73.559 bits (179), Expect = 2.336e-15
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEI-GKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPR 93
            ++ A+ R+C  C K + K +GCNR+ C CGAQMCY+CK K+  +YDHFY     P    KCPL ++ + LH  E ++AA K +        L R
Sbjct: 1031 LSLAMLRQCWQCKKMFYKEEGCNRMTCTCGAQMCYLCKVKVN-SYDHFYGQGGHPTTEKKCPLWSDIKALHRQEVSAAAVKAKEELALSNDLSR 1309
[Close]
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592774417|gb|GAXK01180151.1| (TSA: Calanus finmarchicus comp914971_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 68.1662 bits (165), Expect = 1.207e-13
Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 0 
Query:    4 AVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAAR 79
            A+ R+C  C   + + DGCN++ C CGA  CYIC+K +  +Y HFY    +PE GKCPL T++  LH  E   A +
Sbjct:  235 AMVRECVKCNTRFLQEDGCNKMTCQCGATSCYICRKPV-ADYSHFYGQGGQPEPGKCPLYTDNVKLHRNEVKEAVQ 459
[Close]
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592774418|gb|GAXK01180150.1| (TSA: Calanus finmarchicus comp914971_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 68.1662 bits (165), Expect = 1.474e-13
Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 0 
Query:    4 AVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAAR 79
            A+ R+C  C   + + DGCN++ C CGA  CYIC+K +  +Y HFY    +PE GKCPL T++  LH  E   A +
Sbjct:  278 AMVRECVKCNTRFLQEDGCNKMTCQCGATSCYICRKPV-ADYSHFYGQGGQPEPGKCPLYTDNVKLHRNEVKEAVQ 502
[Close]
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592812025|gb|GAXK01142543.1| (TSA: Calanus finmarchicus comp101206_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 61.6178 bits (148), Expect = 8.409e-12
Identity = 31/86 (36.05%), Postives = 48/86 (55.81%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGK-CPLQTNSEDLHHVERTSAARKTEATF 85
            +  A+ R+C  C   + K +GCN++ C CGA+MCY+CK +   +Y HFY     P   K CPL ++ + LH +E   AA + +   
Sbjct:   92 LTEAMLRECAKCKNKFYKEEGCNKMTCRCGAKMCYLCKME-GVDYSHFYGQGGTPTATKTCPLWSDHKVLHQMEVAKAAEEAKQQL 346
[Close]
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592812024|gb|GAXK01142544.1| (TSA: Calanus finmarchicus comp101206_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 60.077 bits (144), Expect = 2.126e-11
Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 0 
Query:   12 CAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGK-CPLQTNSEDLHHVERTSAARKTE 82
            C   + K +GCN++ C CGA+MCY+CKK++  +Y HFY     P   K CPL ++ + LH +E   AA + +
Sbjct:    4 CMNKFYKEEGCNKMTCSCGAKMCYLCKKEV-TDYSHFYGQGGTPTATKTCPLWSDHKVLHQMEVAKAAEEAK 216
[Close]
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592812018|gb|GAXK01142550.1| (TSA: Calanus finmarchicus comp101206_c8_seq1 transcribed RNA sequence)

HSP 1 Score: 58.151 bits (139), Expect = 6.487e-10
Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCI---CGAQMCYICKKKIQPNYDHFYDFPEKPEIGK-CPLQTNSEDLHHVE 73
            ++ A+ R+C  C   Y K +GCN++ C    CGA+MCY+CK+ ++ +Y HFY     P   K CPL T+++ LH  E
Sbjct: 1493 LSEAMIRECWKCKAKYFKEEGCNKMTCPKPNCGAKMCYLCKQPVK-DYTHFYGQGGTPTATKTCPLWTDNKRLHEQE 1720
[Close]
BLAST of EMLSAG00000000174 vs. C. finmarchicus
Match: gi|592812027|gb|GAXK01142541.1| (TSA: Calanus finmarchicus comp101206_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 58.151 bits (139), Expect = 7.556e-10
Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCI---CGAQMCYICKKKIQPNYDHFYDFPEKPEIGK-CPLQTNSEDLHHVE 73
            ++ A+ R+C  C   Y K +GCN++ C    CGA+MCY+CK+ ++ +Y HFY     P   K CPL T+++ LH  E
Sbjct: 3252 LSEAMIRECWKCKAKYFKEEGCNKMTCPKPNCGAKMCYLCKQPVK-DYTHFYGQGGTPTATKTCPLWTDNKRLHEQE 3479
[Close]
BLAST of EMLSAG00000000174 vs. L. salmonis peptides
Match: EMLSAP00000000174 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1025:66939:67244:-1 gene:EMLSAG00000000174 transcript:EMLSAT00000000174 description:"augustus_masked-LSalAtl2s1025-processed-gene-0.4")

HSP 1 Score: 211.46 bits (537), Expect = 8.595e-72
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYASY 101
            MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYASY
Sbjct:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYASY 101
[Close]
BLAST of EMLSAG00000000174 vs. L. salmonis peptides
Match: EMLSAP00000011518 (pep:novel supercontig:LSalAtl2s:LSalAtl2s799:200476:201189:-1 gene:EMLSAG00000011518 transcript:EMLSAT00000011518 description:"augustus_masked-LSalAtl2s799-processed-gene-2.0")

HSP 1 Score: 104.375 bits (259), Expect = 1.552e-28
Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = 0 
Query:    7 RKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFD 86
            RKC+ C K + K +GCNRI+C CGAQMCYIC+  + P+ DHFY+  E+PE GKCPLQ+NSEDLH +ER  A +K  ++ D
Sbjct:  141 RKCYRCEKYFQKYEGCNRIECHCGAQMCYICRSPVIPSQDHFYNCQEQPEPGKCPLQSNSEDLHSMERAIAGKKVVSSID 220
[Close]
BLAST of EMLSAG00000000174 vs. L. salmonis peptides
Match: EMLSAP00000000189 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1029:145437:146295:-1 gene:EMLSAG00000000189 transcript:EMLSAT00000000189 description:"maker-LSalAtl2s1029-snap-gene-1.49")

HSP 1 Score: 99.7525 bits (247), Expect = 5.098e-27
Identity = 55/85 (64.71%), Postives = 61/85 (71.76%), Query Frame = 0 
Query:   20 DGCNRIQC---ICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYASY 101
            +G + I+C    C A  C  C+    P         E+PEIGKCPLQTNSEDLH+VERTSAARKTEATFDHQLSLPRPSTSYASY
Sbjct:  138 EGLDVIKCQYQYCKALTCIHCQLPAHPR--------EEPEIGKCPLQTNSEDLHNVERTSAARKTEATFDHQLSLPRPSTSYASY 214
[Close]
BLAST of EMLSAG00000000174 vs. L. salmonis peptides
Match: EMLSAP00000008081 (pep:novel supercontig:LSalAtl2s:LSalAtl2s481:140168:142448:-1 gene:EMLSAG00000008081 transcript:EMLSAT00000008081 description:"maker-LSalAtl2s481-augustus-gene-1.16")

HSP 1 Score: 70.8626 bits (172), Expect = 1.984e-15
Identity = 36/89 (40.45%), Postives = 48/89 (53.93%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDL--HHVERTSAARKTEATFDH 87
            M  A+ R C  C   + K DGCN+I C CG  +CY+C+K I+  Y HFY      + G CPL +N+E L  + V R +A    EA  D 
Sbjct:  546 MTEALIRTCPKCQNKFFKEDGCNKITCTCGTNICYLCRKVIKTGYKHFYGQGADAQPGMCPLFSNNEKLMENDVARGAAEGIKEAEEDQ 634
[Close]
BLAST of EMLSAG00000000174 vs. L. salmonis peptides
Match: EMLSAP00000011520 (pep:novel supercontig:LSalAtl2s:LSalAtl2s799:201864:202839:-1 gene:EMLSAG00000011520 transcript:EMLSAT00000011520 description:"maker-LSalAtl2s799-snap-gene-2.21")

HSP 1 Score: 66.6254 bits (161), Expect = 7.717e-15
Identity = 35/101 (34.65%), Postives = 54/101 (53.47%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYASY 101
            M+ AV R+C++C KPY K +GCN ++C CGA+MCYIC+  ++  Y +           +C    N   LH +ER  A  +  +      SL    TS+A++
Sbjct:  140 MSEAVIRRCYSCKKPYQKFEGCNSVKCECGAKMCYICRTPLKGGYHN-------NRSRECSSSVNMVSLHEIERRKAEEEARS------SLGATGTSFANF 227
[Close]
BLAST of EMLSAG00000000174 vs. SwissProt
Match: gi|57015417|sp|Q9NWF9.3|RN216_HUMAN (RecName: Full=E3 ubiquitin-protein ligase RNF216; AltName: Full=RING finger protein 216; AltName: Full=Triad domain-containing protein 3; AltName: Full=Ubiquitin-conjugating enzyme 7-interacting protein 1; AltName: Full=Zinc finger protein inhibiting NF-kappa-B)

HSP 1 Score: 62.7734 bits (151), Expect = 8.647e-12
Identity = 32/70 (45.71%), Postives = 39/70 (55.71%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKP-----EIGKCPLQTN 65
            M  A  RKCH C     K++GCNR+ C CGAQMCY+C+  I   YDHF   P  P     E  +C L T+
Sbjct:  667 MTAARIRKCHKCGTGLIKSEGCNRMSCRCGAQMCYLCRVSIN-GYDHFCQHPRSPGAPCQECSRCSLWTD 735
[Close]
BLAST of EMLSAG00000000174 vs. SwissProt
Match: gi|57015377|sp|P58283.3|RN216_MOUSE (RecName: Full=E3 ubiquitin-protein ligase RNF216; AltName: Full=RING finger protein 216; AltName: Full=Triad domain-containing protein 3; AltName: Full=UbcM4-interacting protein 83; AltName: Full=Ubiquitin-conjugating enzyme 7-interacting protein 1)

HSP 1 Score: 62.7734 bits (151), Expect = 9.071e-12
Identity = 32/70 (45.71%), Postives = 39/70 (55.71%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKP-----EIGKCPLQTN 65
            M  A  RKCH C     K++GCNR+ C CGAQMCY+C+  I   YDHF   P  P     E  +C L T+
Sbjct:  655 MTAARIRKCHKCGTGLIKSEGCNRMSCRCGAQMCYLCRVSIN-GYDHFCQHPRSPGAPCQECSRCSLWTD 723
[Close]
BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Match: EEB18254.1 (E3 ubiquitin ligase triad3, putative [Pediculus humanus corporis])

HSP 1 Score: 69.3218 bits (168), Expect = 2.288e-14
Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLH 70
            M  A+ R C+ C K + K DGCN++ C CGA+MCY+C+K +Q +Y HF +     E  KCPL + +++LH
Sbjct:  754 MTEALVRTCYKCGKKFVKEDGCNKMTCTCGAKMCYVCRKPVQ-DYSHF-NGQGGTEYEKCPLYSTNDELH 821
[Close]
BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Match: EFX87807.1 (hypothetical protein DAPPUDRAFT_306489 [Daphnia pulex])

HSP 1 Score: 68.9366 bits (167), Expect = 2.983e-14
Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPE---------KPEIGKCPLQTNSEDLHHVERTSAARKTEATF 85
            M  A+ R+C +C K + K DGCN++ C CGA MCYIC+++I+ +Y+HF + P          KP   KCPL +++  +H  E   +A K  A  
Sbjct:  625 MTEALVRQCPSCKKNFVKADGCNKMVCPCGAIMCYICRQQIK-DYNHFSNLPPNQPNQPAPIKPPNAKCPLYSDTLKMHEEEVAISAAKARAEL 717
[Close]
BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Match: gb|EFA00238.1| (hypothetical protein TcasGA2_TC003066 [Tribolium castaneum])

HSP 1 Score: 65.0846 bits (157), Expect = 7.356e-13
Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQT-NSEDLH--HVERTSAARKTEATFD 86
            M+ A  R C +C++ + K  GCN++ C+CGA+MCYICK  +Q +Y HF +       G+CPL T N + LH  +V R + A K +   D
Sbjct:  497 MSEAFLRTCPSCSRKFYKESGCNKMTCLCGAKMCYICKVAVQ-DYSHFGN-------GRCPLFTENLDQLHFDNVIRRAQAAKAQLGVD 577
[Close]
BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Match: gb|EFA00239.2| (hypothetical protein TcasGA2_TC003067 [Tribolium castaneum])

HSP 1 Score: 62.003 bits (149), Expect = 7.511e-12
Identity = 29/75 (38.67%), Postives = 42/75 (56.00%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERT 75
            M  A+ RKC  C+K + K  GCN++ C+CGA MCY+C + +  +Y HF         G+CPL T +    H+ R 
Sbjct:  475 MTEALLRKCWKCSKQFYKESGCNKMTCVCGAMMCYVCGEAV-TDYRHF-------GAGRCPLHTENLQQFHLTRV 541
[Close]
BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Match: gb|KYB28776.1| (hypothetical protein TcasGA2_TC032478 [Tribolium castaneum])

HSP 1 Score: 57.3806 bits (137), Expect = 3.899e-10
Identity = 33/108 (30.56%), Postives = 50/108 (46.30%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHF-------YDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYASY 101
            M  A+ RKC  C   + K +GCN++ C CGA MCYIC + +  +Y HF       YD         CPL +++ DL+       A + +A   + +    P+     Y
Sbjct:  827 MTEALLRKCWKCGVKFFKEEGCNKMTCSCGASMCYICGQPVT-DYKHFNGNGGDRYDL--------CPLYSDTHDLNKDNVLKGAAQAKAELGNVMLKHDPTKDVQEY 925
[Close]
BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Match: gb|KYB28775.1| (hypothetical protein TcasGA2_TC032478 [Tribolium castaneum])

HSP 1 Score: 56.9954 bits (136), Expect = 4.177e-10
Identity = 33/108 (30.56%), Postives = 50/108 (46.30%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHF-------YDFPEKPEIGKCPLQTNSEDLHHVERTSAARKTEATFDHQLSLPRPSTSYASY 101
            M  A+ RKC  C   + K +GCN++ C CGA MCYIC + +  +Y HF       YD         CPL +++ DL+       A + +A   + +    P+     Y
Sbjct:  843 MTEALLRKCWKCGVKFFKEEGCNKMTCSCGASMCYICGQPVT-DYKHFNGNGGDRYDL--------CPLYSDTHDLNKDNVLKGAAQAKAELGNVMLKHDPTKDVQEY 941
[Close]
BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Match: EEB18224.1 (E3 ubiquitin ligase triad3, putative [Pediculus humanus corporis])

HSP 1 Score: 55.4546 bits (132), Expect = 1.558e-9
Identity = 24/50 (48.00%), Postives = 31/50 (62.00%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYD 50
            M   + R C  C + + K DGCN+I C CG   CYIC+K+IQ +Y HF D
Sbjct:  516 MTKKLLRTCPNCGQKFIKIDGCNKITCTCGTLACYICQKQIQ-DYTHFSD 564
[Close]
BLAST of EMLSAG00000000174 vs. nr
Match: gi|1058261100|gb|JAT34035.1| (hypothetical protein g.36925, partial [Graphocephala atropunctata])

HSP 1 Score: 68.5514 bits (166), Expect = 1.809e-11
Identity = 32/70 (45.71%), Postives = 46/70 (65.71%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLH 70
            M  A+ R+C+ C K + K+DGCN++ C CGA+MCYIC++ I  +Y HF + P   E  KCPL +  + LH
Sbjct:  355 MTKALVRECYKCKKSFIKSDGCNKMTCSCGAKMCYICRQPIN-DYKHF-NGPGGSEASKCPLYSTEQVLH 422
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BLAST of EMLSAG00000000174 vs. nr
Match: gi|1058081898|gb|JAS44610.1| (hypothetical protein g.28188 [Cuerna arida])

HSP 1 Score: 68.5514 bits (166), Expect = 1.849e-11
Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARK 80
            M  A+ R+C+ C K + K+DGCN++ C CGA+MCYIC++ I  +Y HF + P   E  KCPL +  + LH     + A K
Sbjct:  450 MTKALVRECYKCKKSFIKSDGCNKMTCTCGAKMCYICRQPIT-DYKHF-NGPGGSEKSKCPLYSTEKLLHEDAVKAVAEK 527
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BLAST of EMLSAG00000000174 vs. nr
Match: gi|987908428|ref|XP_015429792.1| (PREDICTED: uncharacterized protein LOC107186444 [Dufourea novaeangliae])

HSP 1 Score: 68.1662 bits (165), Expect = 3.145e-11
Identity = 37/81 (45.68%), Postives = 47/81 (58.02%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGKCPLQTNSEDLHHVERTSAARKT 81
            M  A+ RKC  C++PY K DGCN+I C C AQMCYIC ++I   YDHF D         CPL +NS  L+     + A +T
Sbjct:  881 MTEALVRKCKRCSRPYFKEDGCNKITCSCRAQMCYICDEEI-TGYDHF-DRMNVLTQRLCPLHSNSVTLNDQTVEAVANET 959
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BLAST of EMLSAG00000000174 vs. nr
Match: gi|759057134|ref|XP_011337809.1| (PREDICTED: E3 ubiquitin-protein ligase RNF216 isoform X2 [Cerapachys biroi] >gi|607360568|gb|EZA54896.1| E3 ubiquitin-protein ligase [Cerapachys biroi])

HSP 1 Score: 67.0106 bits (162), Expect = 6.668e-11
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGK-CPLQTNSEDLH 70
            M  A+ RKC+ C K + K +GCN++ C+CGAQMCYIC K +  NY+HF      P   K CPL ++   ++
Sbjct: 1193 MTEALIRKCYRCGKTFFKEEGCNKMTCVCGAQMCYICDKPVT-NYEHFRGQGASPSNSKLCPLWSDDRRMN 1262
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BLAST of EMLSAG00000000174 vs. nr
Match: gi|759057132|ref|XP_011337808.1| (PREDICTED: E3 ubiquitin-protein ligase RNF216 isoform X1 [Cerapachys biroi] >gi|1134653273|ref|XP_019887294.1| PREDICTED: E3 ubiquitin-protein ligase RNF216 isoform X1 [Cerapachys biroi])

HSP 1 Score: 67.0106 bits (162), Expect = 6.800e-11
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 0 
Query:    1 MANAVXRKCHACAKPYTKTDGCNRIQCICGAQMCYICKKKIQPNYDHFYDFPEKPEIGK-CPLQTNSEDLH 70
            M  A+ RKC+ C K + K +GCN++ C+CGAQMCYIC K +  NY+HF      P   K CPL ++   ++
Sbjct: 1193 MTEALIRKCYRCGKTFFKEEGCNKMTCVCGAQMCYICDKPVT-NYEHFRGQGASPSNSKLCPLWSDDRRMN 1262
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000174 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 23
Match NameE-valueIdentityDescription
-1.180e-446.00symbol:An15g06200 "Putative uncharacterized protei... [more]
-1.180e-446.00symbol:An15g06200 species:5061 "Aspergillus niger"... [more]
-8.652e-438.78symbol:orf19.5942 species:5476 "Candida albicans" ... [more]

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BLAST of EMLSAG00000000174 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592923318|gb|GAXK01035097.1|6.652e-1739.77TSA: Calanus finmarchicus comp110292_c2_seq2 trans... [more]
gi|592923319|gb|GAXK01035096.1|7.661e-1739.77TSA: Calanus finmarchicus comp110292_c2_seq1 trans... [more]
gi|592942599|gb|GAXK01015954.1|1.069e-1641.49TSA: Calanus finmarchicus comp204909_c1_seq2 trans... [more]
gi|592942600|gb|GAXK01015953.1|2.336e-1541.49TSA: Calanus finmarchicus comp204909_c1_seq1 trans... [more]
gi|592774417|gb|GAXK01180151.1|1.207e-1343.42TSA: Calanus finmarchicus comp914971_c0_seq2 trans... [more]
gi|592774418|gb|GAXK01180150.1|1.474e-1343.42TSA: Calanus finmarchicus comp914971_c0_seq1 trans... [more]
gi|592812025|gb|GAXK01142543.1|8.409e-1236.05TSA: Calanus finmarchicus comp101206_c1_seq3 trans... [more]
gi|592812024|gb|GAXK01142544.1|2.126e-1140.28TSA: Calanus finmarchicus comp101206_c1_seq4 trans... [more]
gi|592812018|gb|GAXK01142550.1|6.487e-1040.26TSA: Calanus finmarchicus comp101206_c8_seq1 trans... [more]
gi|592812027|gb|GAXK01142541.1|7.556e-1040.26TSA: Calanus finmarchicus comp101206_c1_seq1 trans... [more]

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BLAST of EMLSAG00000000174 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 5
Match NameE-valueIdentityDescription
EMLSAP000000001748.595e-72100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1025:6693... [more]
EMLSAP000000115181.552e-2857.50pep:novel supercontig:LSalAtl2s:LSalAtl2s799:20047... [more]
EMLSAP000000001895.098e-2764.71pep:novel supercontig:LSalAtl2s:LSalAtl2s1029:1454... [more]
EMLSAP000000080811.984e-1540.45pep:novel supercontig:LSalAtl2s:LSalAtl2s481:14016... [more]
EMLSAP000000115207.717e-1534.65pep:novel supercontig:LSalAtl2s:LSalAtl2s799:20186... [more]
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BLAST of EMLSAG00000000174 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
gi|57015417|sp|Q9NWF9.3|RN216_HUMAN8.647e-1245.71RecName: Full=E3 ubiquitin-protein ligase RNF216; ... [more]
gi|57015377|sp|P58283.3|RN216_MOUSE9.071e-1245.71RecName: Full=E3 ubiquitin-protein ligase RNF216; ... [more]
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BLAST of EMLSAG00000000174 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 7
Match NameE-valueIdentityDescription
EEB18254.12.288e-1444.29E3 ubiquitin ligase triad3, putative [Pediculus hu... [more]
EFX87807.12.983e-1438.30hypothetical protein DAPPUDRAFT_306489 [Daphnia pu... [more]
gb|EFA00238.1|7.356e-1340.45hypothetical protein TcasGA2_TC003066 [Tribolium c... [more]
gb|EFA00239.2|7.511e-1238.67hypothetical protein TcasGA2_TC003067 [Tribolium c... [more]
gb|KYB28776.1|3.899e-1030.56hypothetical protein TcasGA2_TC032478 [Tribolium c... [more]
gb|KYB28775.1|4.177e-1030.56hypothetical protein TcasGA2_TC032478 [Tribolium c... [more]
EEB18224.11.558e-948.00E3 ubiquitin ligase triad3, putative [Pediculus hu... [more]
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BLAST of EMLSAG00000000174 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|1058261100|gb|JAT34035.1|1.809e-1145.71hypothetical protein g.36925, partial [Graphocepha... [more]
gi|1058081898|gb|JAS44610.1|1.849e-1142.50hypothetical protein g.28188 [Cuerna arida][more]
gi|987908428|ref|XP_015429792.1|3.145e-1145.68PREDICTED: uncharacterized protein LOC107186444 [D... [more]
gi|759057134|ref|XP_011337809.1|6.668e-1143.66PREDICTED: E3 ubiquitin-protein ligase RNF216 isof... [more]
gi|759057132|ref|XP_011337808.1|6.800e-1143.66PREDICTED: E3 ubiquitin-protein ligase RNF216 isof... [more]

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BLAST of EMLSAG00000000174 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1025supercontigLSalAtl2s1025:66939..67244 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s1025-processed-gene-0.4
Biotypeprotein_coding
NoteE3 ubiquitin-protein ligase RNF216
EvidenceIEA
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000174 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000174EMLSAT00000000174-696021Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1025:66939..67244-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000174-682940 ID=EMLSAG00000000174-682940|Name=EMLSAG00000000174|organism=Lepeophtheirus salmonis|type=gene|length=306bp|location=Sequence derived from alignment at LSalAtl2s1025:66939..67244- (Lepeophtheirus salmonis)
ATGGCCAATGCGGTGYTTCGCAAATGTCATGCTTGTGCAAAACCATATAC
GAAAACAGATGGATGTAACCGTATCCAATGCATATGCGGTGCTCAAATGT
GTTATATCTGCAAAAAGAAAATCCAGCCTAATTATGATCATTTCTATGAT
TTTCCAGAAAAACCAGAAATCGGTAAATGCCCCCTTCAGACGAATTCCGA
GGATCTTCATCATGTAGAACGTACATCTGCAGCAAGGAAAACAGAGGCTA
CTTTTGATCATCAATTAAGTTTACCAAGACCTAGTACCTCGTATGCATCA
TATTAG
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