EMLSAG00000000183, EMLSAG00000000183-682949 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000183 vs. C. finmarchicus
Match: gi|592815716|gb|GAXK01138852.1| (TSA: Calanus finmarchicus comp8482777_c0_seq1 transcribed RNA sequence) HSP 1 Score: 154.066 bits (388), Expect = 3.515e-44 Identity = 70/142 (49.30%), Postives = 100/142 (70.42%), Query Frame = 0 Query: 57 CDPFEFVQWRVRPLINGGAECEPKKNDTKQCGLDQLAPGTKWLLAEHKKCISELEHLKDIIGDLHRWVDLIHERGXAMFNAFNELKKHLEDIQQQIIGLHRVNHDNEVIINRLKKELDEWKGKARKFQVELDELKTKYMELE 198 CDPF+ ++ + LI+G A C +KN TK C D PGT WLL EHK C+ EL+ LK +I DLHR++DLIH+RG ++FNA+NEL+K L DI+++I + R NHD E I RL+ E+++WK K+ K ++L++L KY E+E Sbjct: 3 CDPFKMIRIKEERLISGSATCTDRKNITKPCSRDDFPPGTVWLLNEHKLCVQELQKLKTMIEDLHRYIDLIHQRGQSLFNAYNELRKRLMDIRREISIIGRRNHDAEQTIKRLRVEMEDWKTKSNKMTMDLNQLNAKYKEME 428
BLAST of EMLSAG00000000183 vs. C. finmarchicus
Match: gi|592782031|gb|GAXK01172537.1| (TSA: Calanus finmarchicus comp4750034_c0_seq1 transcribed RNA sequence) HSP 1 Score: 55.4546 bits (132), Expect = 3.042e-8 Identity = 39/113 (34.51%), Postives = 65/113 (57.52%), Query Frame = 0 Query: 205 KREFSSCSSERAQCNAEQTTYESKISNIVQENRQLKSQLINAEKYKDLVEAARKRVKSLEIQVDRLLKDIKKTQTDYNKCKIDVLNAKTRK-APKFVKDTHVDLGMTMFITHN 316 K+ + + + + EQ K+ + +NR LKS L++AE+YK+ + V L+ ++ + DI+KT+ D K +++ K +K APKF KDT V+L M+M+ITHN Sbjct: 26 KQTHETLQNSKEELTLEQQRLNQKLDALSVDNRNLKSSLLDAERYKEEYREESEIVAMLKKKMKEIQMDIEKTKEDLQKARMEGAMPKYKKPAPKFNKDTKVNLDMSMWITHN 364
BLAST of EMLSAG00000000183 vs. C. finmarchicus
Match: gi|592883177|gb|GAXK01075198.1| (TSA: Calanus finmarchicus comp3892142_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 2.331e-1 Identity = 19/50 (38.00%), Postives = 31/50 (62.00%), Query Frame = 0 Query: 135 FNAFNELKKHLEDIQQQIIGLHRVNHDNEVIINRLKKELDEWKGKARKFQ 184 + FNE+K +LED ++I L ++ HDN ++L+KE++ RKFQ Sbjct: 136 IDKFNEVKSNLEDKDEKIDSLQKLVHDNTEKFDKLEKEIE------RKFQ 267
BLAST of EMLSAG00000000183 vs. C. finmarchicus
Match: gi|592899420|gb|GAXK01058955.1| (TSA: Calanus finmarchicus comp126831_c0_seq1 transcribed RNA sequence) HSP 1 Score: 32.7278 bits (73), Expect = 2.104e+0 Identity = 43/173 (24.86%), Postives = 76/173 (43.93%), Query Frame = 0 Query: 125 DLIHERGXAMFNAFNELKKHLEDIQQQIIGLHRVNHDNEVIINRLKKELDEWKGKARKFQVELDELKTKYMELERQHNKMKREFSSC-------SSERAQCNAEQTTYESKISNIVQENRQLKSQLINAEKYKDLVEAARKRVKSLEIQVDRLLKDIKKTQTDYNKCKIDVLN 290 +L+ ER M L++HL ++QQ+I+ + R KK + K +A E+ +L++K + Q +++K E + S AE T E KI +I+ E L L E DL + +K + L+ + LLK+ ++ +T ++LN Sbjct: 2211 NLVAERSQEM----KGLEQHLNELQQEIVE-----------VGRSKKSYEAEKKRA---MAEIQKLRSKVANINSQVSQVKAEEDNAVDNAEHISGRLVTRQAELTEAEEKIQDILNEREMLTDLLSEKE---DLFKRNKKELNELKSATNPLLKEQREIETQITNKTKEILN 2666
BLAST of EMLSAG00000000183 vs. C. finmarchicus
Match: gi|592851985|gb|GAXK01105559.1| (TSA: Calanus finmarchicus comp185233_c1_seq1 transcribed RNA sequence) HSP 1 Score: 31.9574 bits (71), Expect = 4.310e+0 Identity = 41/183 (22.40%), Postives = 80/183 (43.72%), Query Frame = 0 Query: 110 LEHLKDIIGDLHRWVDLIHERGXAMFNAFNELKKHLEDIQQQIIGLHRVNHDNEVIINRLKKELDEWKGKARKFQVELDELKTKYMELERQHNKMKREFSSCSSERAQCNAEQTTYESKISNIVQENRQLKSQLINAEKYKDLVEAARKRVKSLEIQVDRLLKDIKKTQTDYN-KCKIDVLNA 291 ++ L+ + D+ D + + ++ + NEL K ED + + + NE + + KE + K LDE K Y E + ++++ E N++ T+Y+ ++ + QE R ++SQLI AA R+++ + D + + D N K +I+ LN+ Sbjct: 4670 VDELQVSLNDVEAERDQLSKNASSLESQNNELSKVNEDNENLRFEVAELTKKNEFLFAEIAKERLRLESKIETLADSLDEKKKDYSIKEFEVSQLQSE-----------NSDLTSYKRQVLTLEQEKRDIESQLIQV--------AAESRMRATKSPSPAYTTDSNQNEGDDNLKMQIEFLNS 5161
BLAST of EMLSAG00000000183 vs. C. finmarchicus
Match: gi|592851984|gb|GAXK01105560.1| (TSA: Calanus finmarchicus comp185233_c1_seq2 transcribed RNA sequence) HSP 1 Score: 31.5722 bits (70), Expect = 4.987e+0 Identity = 41/183 (22.40%), Postives = 80/183 (43.72%), Query Frame = 0 Query: 110 LEHLKDIIGDLHRWVDLIHERGXAMFNAFNELKKHLEDIQQQIIGLHRVNHDNEVIINRLKKELDEWKGKARKFQVELDELKTKYMELERQHNKMKREFSSCSSERAQCNAEQTTYESKISNIVQENRQLKSQLINAEKYKDLVEAARKRVKSLEIQVDRLLKDIKKTQTDYN-KCKIDVLNA 291 ++ L+ + D+ D + + ++ + NEL K ED + + + NE + + KE + K LDE K Y E + ++++ E N++ T+Y+ ++ + QE R ++SQLI AA R+++ + D + + D N K +I+ LN+ Sbjct: 4670 VDELQVSLNDVEAERDQLSKNASSLESQNNELSKVNEDNENLRFEVAELTKKNEFLFAEIAKERLRLESKIETLADSLDEKKKDYSIKEFEVSQLQSE-----------NSDLTSYKRQVLTLEQEKRDIESQLIQV--------AAESRMRATKSPSPAYTTDSNQNEGDDNLKMQIEFLNS 5161
BLAST of EMLSAG00000000183 vs. C. finmarchicus
Match: gi|592812031|gb|GAXK01142537.1| (TSA: Calanus finmarchicus comp101322_c1_seq4 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 9.638e+0 Identity = 41/163 (25.15%), Postives = 76/163 (46.63%), Query Frame = 0 Query: 167 NRLKKELDEWKGKARKFQVELDELKTKY----MELERQH---NKMKREFSSCSSE-----------------------RAQCNAEQTTYESKISNIVQENRQLKSQLINAEKYKDLVEAARKRVKS-----------LEIQVDRLLKDIKKTQTDYNKCKIDV 288 N+ + LD+ + + + QVEL++L K+ MEL + H K K+E ++ +E RA+ + E+ K+ VQEN +LKS N EK D ++ +RV+S ++++++LL++ K + YN+ K ++ Sbjct: 2904 NKAQTGLDKSQEEVARLQVELEKLYDKHDKTQMELRKAHGELEKFKQETATLEAEVERFAGRMGKYQDNEEKMNEDMSRARIDEERVK--EKLERSVQENEKLKSYKANYEKEIDALKTEIERVESSKSKVLYESEKTQLEIEKLLQENKAVKDKYNQAKQEI 3386
BLAST of EMLSAG00000000183 vs. C. finmarchicus
Match: gi|592812032|gb|GAXK01142536.1| (TSA: Calanus finmarchicus comp101322_c1_seq3 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 9.639e+0 Identity = 41/163 (25.15%), Postives = 76/163 (46.63%), Query Frame = 0 Query: 167 NRLKKELDEWKGKARKFQVELDELKTKY----MELERQH---NKMKREFSSCSSE-----------------------RAQCNAEQTTYESKISNIVQENRQLKSQLINAEKYKDLVEAARKRVKS-----------LEIQVDRLLKDIKKTQTDYNKCKIDV 288 N+ + LD+ + + + QVEL++L K+ MEL + H K K+E ++ +E RA+ + E+ K+ VQEN +LKS N EK D ++ +RV+S ++++++LL++ K + YN+ K ++ Sbjct: 2904 NKAQTGLDKSQEEVARLQVELEKLYDKHDKTQMELRKAHGELEKFKQETATLEAEVERFAGRMGKYQDNEEKMNEDMSRARIDEERVK--EKLERSVQENEKLKSYKANYEKEIDALKTEIERVESSKSKVLYESEKTQLEIEKLLQENKAVKDKYNQAKQEI 3386
BLAST of EMLSAG00000000183 vs. C. finmarchicus
Match: gi|592812033|gb|GAXK01142535.1| (TSA: Calanus finmarchicus comp101322_c1_seq2 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 9.639e+0 Identity = 41/163 (25.15%), Postives = 76/163 (46.63%), Query Frame = 0 Query: 167 NRLKKELDEWKGKARKFQVELDELKTKY----MELERQH---NKMKREFSSCSSE-----------------------RAQCNAEQTTYESKISNIVQENRQLKSQLINAEKYKDLVEAARKRVKS-----------LEIQVDRLLKDIKKTQTDYNKCKIDV 288 N+ + LD+ + + + QVEL++L K+ MEL + H K K+E ++ +E RA+ + E+ K+ VQEN +LKS N EK D ++ +RV+S ++++++LL++ K + YN+ K ++ Sbjct: 2904 NKAQTGLDKSQEEVARLQVELEKLYDKHDKTQMELRKAHGELEKFKQETATLEAEVERFAGRMGKYQDNEEKMNEDMSRARIDEERVK--EKLERSVQENEKLKSYKANYEKEIDALKTEIERVESSKSKVLYESEKTQLEIEKLLQENKAVKDKYNQAKQEI 3386
BLAST of EMLSAG00000000183 vs. C. finmarchicus
Match: gi|592812034|gb|GAXK01142534.1| (TSA: Calanus finmarchicus comp101322_c1_seq1 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 9.639e+0 Identity = 41/163 (25.15%), Postives = 76/163 (46.63%), Query Frame = 0 Query: 167 NRLKKELDEWKGKARKFQVELDELKTKY----MELERQH---NKMKREFSSCSSE-----------------------RAQCNAEQTTYESKISNIVQENRQLKSQLINAEKYKDLVEAARKRVKS-----------LEIQVDRLLKDIKKTQTDYNKCKIDV 288 N+ + LD+ + + + QVEL++L K+ MEL + H K K+E ++ +E RA+ + E+ K+ VQEN +LKS N EK D ++ +RV+S ++++++LL++ K + YN+ K ++ Sbjct: 2904 NKAQTGLDKSQEEVARLQVELEKLYDKHDKTQMELRKAHGELEKFKQETATLEAEVERFAGRMGKYQDNEEKMNEDMSRARIDEERVK--EKLERSVQENEKLKSYKANYEKEIDALKTEIERVESSKSKVLYESEKTQLEIEKLLQENKAVKDKYNQAKQEI 3386
BLAST of EMLSAG00000000183 vs. L. salmonis peptides
Match: EMLSAP00000000183 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1028:71411:72669:-1 gene:EMLSAG00000000183 transcript:EMLSAT00000000183 description:"maker-LSalAtl2s1028-snap-gene-0.17") HSP 1 Score: 743.421 bits (1918), Expect = 0.000e+0 Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 0 Query: 1 MNWNIFALIGFLCCFQITLATNKQQTNEGYQVDSKGEVPEYSYKSGCKYQETPWSDCDPFEFVQWRVRPLINGGAECEPKKNDTKQCGLDQLAPGTKWLLAEHKKCISELEHLKDIIGDLHRWVDLIHERGXAMFNAFNELKKHLEDIQQQIIGLHRVNHDNEVIINRLKKELDEWKGKARKFQVELDELKTKYMELERQHNKMKREFSSCSSERAQCNAEQTTYESKISNIVQENRQLKSQLINAEKYKDLVEAARKRVKSLEIQVDRLLKDIKKTQTDYNKCKIDVLNAKTRKAPKFVKDTHVDLGMTMFITHNKTKVKTTYKPKYTYTTTTTTTTTTRYYPTTSTTTXTTTTTYTT 359 MNWNIFALIGFLCCFQITLATNKQQTNEGYQVDSKGEVPEYSYKSGCKYQETPWSDCDPFEFVQWRVRPLINGGAECEPKKNDTKQCGLDQLAPGTKWLLAEHKKCISELEHLKDIIGDLHRWVDLIHERGXAMFNAFNELKKHLEDIQQQIIGLHRVNHDNEVIINRLKKELDEWKGKARKFQVELDELKTKYMELERQHNKMKREFSSCSSERAQCNAEQTTYESKISNIVQENRQLKSQLINAEKYKDLVEAARKRVKSLEIQVDRLLKDIKKTQTDYNKCKIDVLNAKTRKAPKFVKDTHVDLGMTMFITHNKTKVKTTYKPKYTYTTTTTTTTTTRYYPTTSTTTXTTTTTYTT Sbjct: 1 MNWNIFALIGFLCCFQITLATNKQQTNEGYQVDSKGEVPEYSYKSGCKYQETPWSDCDPFEFVQWRVRPLINGGAECEPKKNDTKQCGLDQLAPGTKWLLAEHKKCISELEHLKDIIGDLHRWVDLIHERGXAMFNAFNELKKHLEDIQQQIIGLHRVNHDNEVIINRLKKELDEWKGKARKFQVELDELKTKYMELERQHNKMKREFSSCSSERAQCNAEQTTYESKISNIVQENRQLKSQLINAEKYKDLVEAARKRVKSLEIQVDRLLKDIKKTQTDYNKCKIDVLNAKTRKAPKFVKDTHVDLGMTMFITHNKTKVKTTYKPKYTYTTTTTTTTTTRYYPTTSTTTXTTTTTYTT 359
BLAST of EMLSAG00000000183 vs. L. salmonis peptides
Match: EMLSAP00000007670 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4476:1751:4717:-1 gene:EMLSAG00000007670 transcript:EMLSAT00000007670 description:"snap_masked-LSalAtl2s4476-processed-gene-0.1") HSP 1 Score: 189.889 bits (481), Expect = 8.467e-55 Identity = 89/231 (38.53%), Postives = 150/231 (64.94%), Query Frame = 0 Query: 46 GCKYQETPWSDCDPFEFVQWRVRPLINGGAECEPKKNDTKQCGLDQLAPGTKWLLAEHKKCISELEHLKDIIGDLHRWVDLIHERGXAMFNAFNELKKHLEDIQQQIIGLHRVNHDNEVIINRLKKELDEWKGKARKFQVELDELKTKYMELERQHNKMKREFSSCSSERAQCNAEQTTYESKISNIVQENRQLKSQLINAEKYKDLVEAARKRVKSLEIQVDRLLKDIKK 276 C+Y E WSDCD FE ++RV LI+GG +CE KN TK C + PGT WL++EH+KCI+EL LK +I DL ++++ +H +G +F+A+ LKKHL++++Q I L + + I +++E++ WKGKAR+ Q ELDEL+TKY +L+ +H + + C S++++C +E + KI + EN ++K +L+ A KYK+ ++ + + E +V++L ++++K Sbjct: 79 ACRYDEPFWSDCDAFELKRYRVLHLIHGGRQCEEVKNITKHCTPGEFPPGTTWLISEHRKCIAELTRLKAMIADLAKYIEALHGKGKILFDAYLGLKKHLDELKQTIQSLQTEDQQKKTTIANVREEIETWKGKARELQAELDELRTKYHDLQAEHKEGGEKLKECFSDKSRCLSENDRLKKKIHDEEAENSEIKRRLLEAAKYKEQLKEVKFAIAKFEYKVEKLQENLEK 309 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000183 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000183 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 10
BLAST of EMLSAG00000000183 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000000183 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000183 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000183 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000183 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1028:71411..72669- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000183-682949 ID=EMLSAG00000000183-682949|Name=EMLSAG00000000183|organism=Lepeophtheirus salmonis|type=gene|length=1259bp|location=Sequence derived from alignment at LSalAtl2s1028:71411..72669- (Lepeophtheirus salmonis)back to top Add to Basket
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