EMLSAG00000000208, EMLSAG00000000208-682974 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000000208
Unique Name	EMLSAG00000000208-682974
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000000208 vs. GO
Match: - (symbol:IGF2R "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0001948 "glycoprotein binding" evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA] [GO:0005520 "insulin-like growth factor binding" evidence=IEA] [GO:0005537 "mannose binding" evidence=IEA] [GO:0005641 "nuclear envelope lumen" evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030140 "trans-Golgi network transport vesicle" evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA] InterPro:IPR000479 Pfam:PF00878 GO:GO:0016021 GO:GO:0005737 GO:GO:0005215 InterPro:IPR013806 SUPFAM:SSF57440 InterPro:IPR009011 SUPFAM:SSF50911 Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023 PROSITE:PS51092 OrthoDB:EOG74BJRG TreeFam:TF328963 GeneTree:ENSGT00390000013943 EMBL:AADN03002983 PDB:2L21 PDBsum:2L21 Ensembl:ENSGALT00000018986 PRO:PR:F1NVD2 Uniprot:F1NVD2)

HSP 1 Score: 44.669 bits (104), Expect = 3.294e-5
Identity = 21/46 (45.65%), Postives = 27/46 (58.70%), Query Frame = 0

Query:   21 SAGQSCS--TTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            + G  C   T  G +C+FPFKY G  YD C T +  N  WCAT++D
Sbjct: 1958 TGGDRCPPVTEKGELCVFPFKYKGKSYDKCIT-EEKNRPWCATAVD 2002

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592771624|gb|GAXK01182944.1| (TSA: Calanus finmarchicus comp288222_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 50.8322 bits (120), Expect = 7.536e-8
Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = 0

Query:    6 TFYSLPLTLGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTT-IDYGNTAWCATSLD 64
            T  SL L + +    + GQ CSTTD   C+FPF YLG  YD CT   D     WCAT++D
Sbjct: 1543 TQNSLKLMVTLVIGTNLGQGCSTTDKDRCVFPFIYLGKTYDDCTRDSDPDGKRWCATNVD 1722

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592771625|gb|GAXK01182943.1| (TSA: Calanus finmarchicus comp288222_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 50.8322 bits (120), Expect = 7.548e-8
Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = 0

Query:    6 TFYSLPLTLGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTT-IDYGNTAWCATSLD 64
            T  SL L + +    + GQ CSTTD   C+FPF YLG  YD CT   D     WCAT++D
Sbjct: 1547 TQNSLKLMVTLVIGTNLGQGCSTTDKDRCVFPFIYLGKTYDDCTRDSDPDGKRWCATNVD 1726

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592771626|gb|GAXK01182942.1| (TSA: Calanus finmarchicus comp288222_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 50.8322 bits (120), Expect = 7.595e-8
Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = 0

Query:    6 TFYSLPLTLGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTT-IDYGNTAWCATSLD 64
            T  SL L + +    + GQ CSTTD   C+FPF YLG  YD CT   D     WCAT++D
Sbjct: 1572 TQNSLKLMVTLVIGTNLGQGCSTTDKDRCVFPFIYLGKTYDDCTRDSDPDGKRWCATNVD 1751

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592868234|gb|GAXK01089328.1| (TSA: Calanus finmarchicus comp891836_c0_seq13 transcribed RNA sequence)

HSP 1 Score: 45.8246 bits (107), Expect = 6.388e-7
Identity = 20/42 (47.62%), Postives = 26/42 (61.90%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTA-WCATSLD 64
            Q C T  G+ C+FPFKY G  +  CT  D  N A WCAT+++
Sbjct:   96 QGCQTARGKYCVFPFKYKGKAHSKCTKEDSKNGAYWCATAIE 221

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592868237|gb|GAXK01089325.1| (TSA: Calanus finmarchicus comp891836_c0_seq10 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 7.113e-7
Identity = 21/42 (50.00%), Postives = 26/42 (61.90%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTA-WCATSLD 64
            Q C T  G+ C+FPFKY G  +  CT  D  N A WCAT++D
Sbjct:  331 QGCQTASGKYCVFPFKYKGKAHSKCTKEDSKNGAYWCATAVD 456

HSP 2 Score: 37.7354 bits (86), Expect = 9.671e-4
Identity = 22/56 (39.29%), Postives = 28/56 (50.00%), Query Frame = 0

Query:   11 PLTLGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTA--WCATSLD 64
            PL + M       + C TT    CIFPFK+ G  Y  CT  DY +    WCAT ++
Sbjct:  133 PLEMDMD------EGCRTTKNEECIFPFKFRGRFYKSCTR-DYSDNGSPWCATQVN 279

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592853500|gb|GAXK01104044.1| (TSA: Calanus finmarchicus comp271928_c0_seq11 transcribed RNA sequence)

HSP 1 Score: 48.1358 bits (113), Expect = 7.477e-7
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 0

Query:   15 GMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
             +Q  +   QSC T +G  C+FPF Y G+ Y  CT++D     WCAT L+
Sbjct: 2033 AVQDTVCEHQSCYTQEGAECVFPFPYKGVTYQNCTSVDV-YLPWCATELN 2179

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592853501|gb|GAXK01104043.1| (TSA: Calanus finmarchicus comp271928_c0_seq10 transcribed RNA sequence)

HSP 1 Score: 48.1358 bits (113), Expect = 7.507e-7
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 0

Query:   15 GMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
             +Q  +   QSC T +G  C+FPF Y G+ Y  CT++D     WCAT L+
Sbjct: 2033 AVQDTVCEHQSCYTQEGAECVFPFPYKGVTYQNCTSVDV-YLPWCATELN 2179

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592853506|gb|GAXK01104038.1| (TSA: Calanus finmarchicus comp271928_c0_seq5 transcribed RNA sequence)

HSP 1 Score: 48.1358 bits (113), Expect = 7.993e-7
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 0

Query:   15 GMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
             +Q  +   QSC T +G  C+FPF Y G+ Y  CT++D     WCAT L+
Sbjct: 2033 AVQDTVCEHQSCYTQEGAECVFPFPYKGVTYQNCTSVDV-YLPWCATELN 2179

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592853507|gb|GAXK01104037.1| (TSA: Calanus finmarchicus comp271928_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 48.1358 bits (113), Expect = 8.199e-7
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 0

Query:   15 GMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
             +Q  +   QSC T +G  C+FPF Y G+ Y  CT++D     WCAT L+
Sbjct: 8414 AVQDTVCEHQSCYTQEGAECVFPFPYKGVTYQNCTSVDV-YLPWCATELN 8560

HSP 2 Score: 38.891 bits (89), Expect = 8.724e-4
Identity = 18/42 (42.86%), Postives = 25/42 (59.52%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTID-YGNTAWCATSLD 64
            + C  ++ + CIFPF+  G  YD CTTI    NT WC+  +D
Sbjct: 3335 RECRISEDQACIFPFRVGGRLYDKCTTIGTETNTPWCSLKVD 3460

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592853508|gb|GAXK01104036.1| (TSA: Calanus finmarchicus comp271928_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 48.1358 bits (113), Expect = 8.203e-7
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 0

Query:   15 GMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
             +Q  +   QSC T +G  C+FPF Y G+ Y  CT++D     WCAT L+
Sbjct: 8414 AVQDTVCEHQSCYTQEGAECVFPFPYKGVTYQNCTSVDV-YLPWCATELN 8560

HSP 2 Score: 38.891 bits (89), Expect = 8.728e-4
Identity = 18/42 (42.86%), Postives = 25/42 (59.52%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTID-YGNTAWCATSLD 64
            + C  ++ + CIFPF+  G  YD CTTI    NT WC+  +D
Sbjct: 3335 RECRISEDQACIFPFRVGGRLYDKCTTIGTETNTPWCSLKVD 3460

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BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000000208 (pep:novel supercontig:LSalAtl2s:LSalAtl2s102:308799:309048:1 gene:EMLSAG00000000208 transcript:EMLSAT00000000208 description:"maker-LSalAtl2s102-snap-gene-3.14")

HSP 1 Score: 132.109 bits (331), Expect = 9.651e-42
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0

Query:    1 MEKTITFYSLPLTLGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            MEKTITFYSLPLTLGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD
Sbjct:    1 MEKTITFYSLPLTLGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64

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BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000007457 (pep:novel supercontig:LSalAtl2s:LSalAtl2s427:165169:167705:1 gene:EMLSAG00000007457 transcript:EMLSAT00000007457 description:"maker-LSalAtl2s427-augustus-gene-1.13")

HSP 1 Score: 78.5666 bits (192), Expect = 1.904e-19
Identity = 34/42 (80.95%), Postives = 38/42 (90.48%), Query Frame = 0

Query:   23 GQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            GQSC TTDGR C+FPFKY+GI YDGCTT+DYG TAWCATS+D
Sbjct:   15 GQSCPTTDGRNCLFPFKYIGIEYDGCTTVDYGTTAWCATSVD 56

HSP 2 Score: 50.0618 bits (118), Expect = 4.469e-9
Identity = 25/49 (51.02%), Postives = 30/49 (61.22%), Query Frame = 0

Query:   16 MQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            M+T + + + C TTD   CIFPF Y GI Y  CTT D   T WCAT +D
Sbjct:  241 METTIPSNK-CGTTDNHACIFPFTYSGITYTTCTTRDNSGTPWCATKVD 288

HSP 3 Score: 46.9802 bits (110), Expect = 6.118e-8
Identity = 21/43 (48.84%), Postives = 26/43 (60.47%), Query Frame = 0

Query:   22 AGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            +   C+T  G  C FPFKY G  YD CTT D   + WCATS++
Sbjct:  143 SADKCATISGVSCTFPFKYNGKTYDACTTADNSGSPWCATSVN 185

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BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000007729 (pep:novel supercontig:LSalAtl2s:LSalAtl2s44:635264:638187:-1 gene:EMLSAG00000007729 transcript:EMLSAT00000007729 description:"maker-LSalAtl2s44-augustus-gene-6.6")

HSP 1 Score: 68.5514 bits (166), Expect = 2.194e-15
Identity = 31/41 (75.61%), Postives = 33/41 (80.49%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            Q C TTDGR C+FPFKYLGI Y  CTT DYG TAWCATS+D
Sbjct:   45 QLCPTTDGRNCLFPFKYLGIEYKACTTADYGTTAWCATSVD 85

HSP 2 Score: 46.9802 bits (110), Expect = 7.496e-8
Identity = 21/39 (53.85%), Postives = 25/39 (64.10%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            C+T  G  C FPFKY G  YD CTT D   + WCATS++
Sbjct:  176 CATISGVSCTFPFKYNGKTYDACTTADNSGSPWCATSVN 214

HSP 3 Score: 46.9802 bits (110), Expect = 8.247e-8
Identity = 22/41 (53.66%), Postives = 23/41 (56.10%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
              C TTD   CIFPF Y G  Y  CTT D   T WCAT +D
Sbjct:  328 NKCGTTDNNACIFPFTYSGKTYTTCTTRDNSGTPWCATKVD 368

[Close]

BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000001112 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1186:1258:2000:-1 gene:EMLSAG00000001112 transcript:EMLSAT00000001112 description:"maker-LSalAtl2s1186-snap-gene-0.10")

HSP 1 Score: 61.2326 bits (147), Expect = 1.412e-13
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0

Query:   25 SCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            SC T  G  C+FPF+YLGI Y+GCTT+DYG T WCATSL
Sbjct:    2 SCLTKSGSSCVFPFQYLGITYEGCTTVDYGTTLWCATSL 40

HSP 2 Score: 56.9954 bits (136), Expect = 5.268e-12
Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 0

Query:   16 MQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
              T+  AG  C TT+G  CIFPFKY G+ Y  CTT+D+G+T WCA S++
Sbjct:   60 ASTVSKAG--CPTTNGNRCIFPFKYNGVSYSECTTVDFGSTHWCAVSVN 106

HSP 3 Score: 48.9062 bits (115), Expect = 3.735e-9
Identity = 22/39 (56.41%), Postives = 25/39 (64.10%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            C TT G  CIFPF Y G  Y+ CTT D   + WCATS+D
Sbjct:  124 CGTTSGSACIFPFIYSGTTYNACTTKDNSGSPWCATSVD 162

[Close]

BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000002861 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1655:58067:61341:1 gene:EMLSAG00000002861 transcript:EMLSAT00000002861 description:"maker-LSalAtl2s1655-augustus-gene-0.2")

HSP 1 Score: 60.8474 bits (146), Expect = 2.127e-13
Identity = 26/43 (60.47%), Postives = 34/43 (79.07%), Query Frame = 0

Query:   21 SAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            S+ ++C+T +G  CIFPFKYLG  Y+ CT +DYG+T WCATSL
Sbjct:   91 SSKKACNTVNGASCIFPFKYLGKTYEECTNVDYGSTMWCATSL 133

HSP 2 Score: 57.7658 bits (138), Expect = 2.575e-12
Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            C+TT+G  CIFPF Y G+ Y  CT +DYGNT WCATSL
Sbjct:   26 CTTTNGDNCIFPFNYNGVRYVKCTNVDYGNTLWCATSL 63

[Close]

BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000012117 (pep:novel supercontig:LSalAtl2s:LSalAtl2s86:629688:632334:-1 gene:EMLSAG00000012117 transcript:EMLSAT00000012117 description:"maker-LSalAtl2s86-snap-gene-6.6")

HSP 1 Score: 61.2326 bits (147), Expect = 3.439e-13
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            C TT GR C+FPF Y G+ Y  CTT+D+GNT WCATS+D
Sbjct:  205 CKTTAGRQCVFPFAYSGVTYTSCTTVDFGNTNWCATSVD 243

HSP 2 Score: 51.2174 bits (121), Expect = 1.379e-9
Identity = 24/38 (63.16%), Postives = 25/38 (65.79%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            CSTT G+ C FPF Y    Y  CTTIDYG   WCATSL
Sbjct:  104 CSTTTGQACTFPFTYNSRTYSACTTIDYGXIHWCATSL 141

HSP 3 Score: 48.521 bits (114), Expect = 1.376e-8
Identity = 24/60 (40.00%), Postives = 36/60 (60.00%), Query Frame = 0

Query:    5 ITFYSLPLTLGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            +T  S+ ++ G+    S+  SC T D + C+FPF Y G+ Y  CTT D   T WCAT+++
Sbjct:   28 VTGSSVTVSFGL--CSSSCPSCGTIDSKACVFPFMYSGVTYTDCTTADNTGTPWCATAVN 85

[Close]

BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000012118 (pep:novel supercontig:LSalAtl2s:LSalAtl2s86:636325:650284:1 gene:EMLSAG00000012118 transcript:EMLSAT00000012118 description:"maker-LSalAtl2s86-augustus-gene-7.20")

HSP 1 Score: 58.151 bits (139), Expect = 1.895e-11
Identity = 25/43 (58.14%), Postives = 32/43 (74.42%), Query Frame = 0

Query:   22 AGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            A  +C+TT G+ CIFPF Y G+ Y  CTT+D+G T WCATS+D
Sbjct: 1031 APSACATTGGQKCIFPFMYNGVSYASCTTVDFGTTKWCATSVD 1073

HSP 2 Score: 57.3806 bits (137), Expect = 3.135e-11
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0

Query:   17 QTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
             TL+S    C+TT+G++C+FPF Y  I Y  CT ID GN  WCATS++
Sbjct:  898 STLISTSGGCATTNGQVCLFPFVYEKITYSACTMIDNGNVHWCATSVE 945

HSP 3 Score: 55.8398 bits (133), Expect = 1.228e-10
Identity = 23/40 (57.50%), Postives = 28/40 (70.00%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            QSC T  G+ C+FPF Y G+ Y  CTT+D GN  WCATS+
Sbjct:  214 QSCPTVSGKQCVFPFTYGGVTYTACTTVDNGNNPWCATSV 253

HSP 4 Score: 55.4546 bits (132), Expect = 1.743e-10
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            + C TT+GR CIFPF+Y G  Y+ CTTID+G+  WCAT +
Sbjct:  969 KGCPTTNGRRCIFPFRYSGSEYNECTTIDFGSNFWCATQV 1008

HSP 5 Score: 54.299 bits (129), Expect = 3.750e-10
Identity = 23/38 (60.53%), Postives = 28/38 (73.68%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            C TT+G  C+FPFKY G  YD CTT D+G+T WCAT +
Sbjct:   72 CPTTNGERCVFPFKYNGKTYDACTTEDFGSTMWCATQV 109

HSP 6 Score: 54.299 bits (129), Expect = 3.750e-10
Identity = 23/38 (60.53%), Postives = 28/38 (73.68%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            C TT+G  C+FPFKY G  YD CTT D+G+T WCAT +
Sbjct:  280 CPTTNGERCVFPFKYNGKTYDACTTEDFGSTMWCATQV 317

HSP 7 Score: 53.9138 bits (128), Expect = 4.886e-10
Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
             SC T  G+ C+FPF Y G+ Y  CTT+D GN  WCATS+
Sbjct:  479 SSCPTVSGKQCVFPFTYGGVTYSACTTVDNGNNPWCATSV 518

HSP 8 Score: 53.5286 bits (127), Expect = 8.611e-10
Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
             SC T  G+ C+FPF Y G+ Y  CTT+D GN  WCATS+
Sbjct:    6 SSCPTLSGKQCVFPFTYGGVTYSACTTVDNGNNPWCATSV 45

HSP 9 Score: 51.9878 bits (123), Expect = 2.694e-9
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            C TT+G  C+FPFK+ G  YD CTT D+G+T WCAT +
Sbjct:  545 CPTTNGERCVFPFKFNGKTYDTCTTEDFGSTMWCATRV 582

HSP 10 Score: 49.6766 bits (117), Expect = 1.576e-8
Identity = 20/43 (46.51%), Postives = 28/43 (65.12%), Query Frame = 0

Query:   22 AGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            A  SC+T DGR C+FPF Y G+ Y GCT ++     WCA +++
Sbjct:  132 APSSCATLDGRPCVFPFIYGGVSYPGCTVVENNGVPWCAETVN 174

HSP 11 Score: 49.6766 bits (117), Expect = 1.576e-8
Identity = 20/43 (46.51%), Postives = 28/43 (65.12%), Query Frame = 0

Query:   22 AGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            A  SC+T DGR C+FPF Y G+ Y GCT ++     WCA +++
Sbjct:  340 APSSCATLDGRPCVFPFIYGGVSYPGCTVVENNGVPWCAETVN 382

HSP 12 Score: 49.6766 bits (117), Expect = 1.576e-8
Identity = 20/43 (46.51%), Postives = 28/43 (65.12%), Query Frame = 0

Query:   22 AGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            A  SC+T DGR C+FPF Y G+ Y GCT ++     WCA +++
Sbjct:  605 APSSCATLDGRPCVFPFIYGGVSYPGCTVVENNGVPWCAETVN 647

[Close]

BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000000266 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1040:2470:5441:-1 gene:EMLSAG00000000266 transcript:EMLSAT00000000266 description:"maker-LSalAtl2s1040-augustus-gene-0.7")

HSP 1 Score: 56.225 bits (134), Expect = 5.052e-11
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 0

Query:   22 AGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            A   C+T  G  C+FPF Y G+ Y+ CTT+D+G+T WCATS+D
Sbjct:  340 ASNVCATLRGSKCVFPFMYNGVTYNSCTTVDFGSTKWCATSVD 382

HSP 2 Score: 55.0694 bits (131), Expect = 1.236e-10
Identity = 25/43 (58.14%), Postives = 30/43 (69.77%), Query Frame = 0

Query:   22 AGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            A  +C TTDGR C FPFKY G+ Y  CTTID   T WC+TS++
Sbjct:  155 APSACGTTDGRGCKFPFKYGGVTYSDCTTIDNSGTPWCSTSVN 197

HSP 3 Score: 52.373 bits (124), Expect = 9.565e-10
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0

Query:   18 TLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            T+ +AG  C T++G  C FPF YLG+ Y+ CT ID+G   WCATS+D
Sbjct:  274 TVSTAG--CPTSNGGRCTFPFVYLGVTYEKCTNIDFGTIFWCATSVD 318

HSP 4 Score: 51.9878 bits (123), Expect = 1.551e-9
Identity = 23/40 (57.50%), Postives = 27/40 (67.50%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
             +C TT G  C+FPF Y G  Y  CTT+DYG T WCATS+
Sbjct:   29 ANCLTTSGSSCVFPFTYSGTTYTSCTTVDYGTTLWCATSV 68

HSP 5 Score: 51.6026 bits (122), Expect = 2.052e-9
Identity = 23/48 (47.92%), Postives = 32/48 (66.67%), Query Frame = 0

Query:   17 QTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
             T+  AG  C TT  R C+FPF Y G+ Y  CTT+D+G+T+WCA ++ 
Sbjct:   88 STVSKAG--CPTTGSRPCVFPFTYNGVEYSTCTTVDFGSTSWCAVAVS 133

HSP 6 Score: 49.6766 bits (117), Expect = 9.310e-9
Identity = 21/37 (56.76%), Postives = 24/37 (64.86%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATS 62
            CS  +G  C+FPF Y G  Y  CTT+D GN  WCATS
Sbjct:  216 CSAVNGXACVFPFSYNGNMYSACTTVDNGNVHWCATS 252

[Close]

BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000012120 (pep:novel supercontig:LSalAtl2s:LSalAtl2s86:692955:707462:1 gene:EMLSAG00000012120 transcript:EMLSAT00000012120 description:"maker-LSalAtl2s86-augustus-gene-7.21")

HSP 1 Score: 56.225 bits (134), Expect = 7.717e-11
Identity = 24/39 (61.54%), Postives = 28/39 (71.79%), Query Frame = 0

Query:   25 SCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            SC T  G+ C FPFKY G+ Y  CTTID G+T WCATS+
Sbjct:  509 SCKTKTGKTCKFPFKYNGVTYRDCTTIDNGSTKWCATSV 547

HSP 2 Score: 51.2174 bits (121), Expect = 3.653e-9
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            C TT+GR C+FPFKY  + Y+ CT   +G+T WCAT++
Sbjct:  575 CPTTNGRRCVFPFKYNEVTYNECTKEGFGDTFWCATTV 612

HSP 3 Score: 48.1358 bits (113), Expect = 5.234e-8
Identity = 17/43 (39.53%), Postives = 27/43 (62.79%), Query Frame = 0

Query:   22 AGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            + + C T +G+ C+FPF Y  + Y  CT++D  +  WCATS +
Sbjct:  635 SSEVCGTINGKACVFPFVYGEVSYKACTSVDNNDVPWCATSTN 677

[Close]

BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000011958 (pep:novel supercontig:LSalAtl2s:LSalAtl2s849:136562:138420:-1 gene:EMLSAG00000011958 transcript:EMLSAT00000011958 description:"maker-LSalAtl2s849-snap-gene-0.23")

HSP 1 Score: 55.4546 bits (132), Expect = 8.764e-11
Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 0

Query:   18 TLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            T+  AG  C T  G  C+FPF YLGI Y+GCTT+D+ N AWCATS+D
Sbjct:   58 TVTRAG--CPTKSGDRCLFPFNYLGITYNGCTTVDF-NIAWCATSID 101

HSP 2 Score: 53.1434 bits (126), Expect = 5.923e-10
Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 0

Query:   22 AGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            A   C T +G+ CIFPF Y G+ Y+ CT  D+G+T WCATS++
Sbjct:  306 ASNVCGTVNGKKCIFPFIYSGVTYNACTNTDFGSTFWCATSVN 348

HSP 3 Score: 43.8986 bits (102), Expect = 7.480e-7
Identity = 20/40 (50.00%), Postives = 24/40 (60.00%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
             +C   DG  CIFPF Y G+ Y+ CT ID   T WCA S+
Sbjct:  204 NNCPAIDGNSCIFPFLYEGVFYEKCTNIDNFGTYWCAISV 243

The following BLAST results are available for this feature:

BLAST of EMLSAG00000000208 vs. GO
BLAST of EMLSAG00000000208 vs. C. finmarchicus
BLAST of EMLSAG00000000208 vs. L. salmonis peptides
BLAST of EMLSAG00000000208 vs. SwissProt
BLAST of EMLSAG00000000208 vs. Select Arthropod Genomes
BLAST of EMLSAG00000000208 vs. nr
BLAST of EMLSAG00000000208 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000000208 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 1


Match Name	E-value	Identity	Description
-	3.294e-5	45.65	symbol:IGF2R "Uncharacterized protein" species:903...	[more]

BLAST of EMLSAG00000000208 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592771624\|gb\|GAXK01182944.1\|	7.536e-8	46.67	TSA: Calanus finmarchicus comp288222_c0_seq3 trans...	[more]
gi\|592771625\|gb\|GAXK01182943.1\|	7.548e-8	46.67	TSA: Calanus finmarchicus comp288222_c0_seq2 trans...	[more]
gi\|592771626\|gb\|GAXK01182942.1\|	7.595e-8	46.67	TSA: Calanus finmarchicus comp288222_c0_seq1 trans...	[more]
gi\|592868234\|gb\|GAXK01089328.1\|	6.388e-7	47.62	TSA: Calanus finmarchicus comp891836_c0_seq13 tran...	[more]
gi\|592868237\|gb\|GAXK01089325.1\|	7.113e-7	50.00	TSA: Calanus finmarchicus comp891836_c0_seq10 tran...	[more]
gi\|592853500\|gb\|GAXK01104044.1\|	7.477e-7	42.00	TSA: Calanus finmarchicus comp271928_c0_seq11 tran...	[more]
gi\|592853501\|gb\|GAXK01104043.1\|	7.507e-7	42.00	TSA: Calanus finmarchicus comp271928_c0_seq10 tran...	[more]
gi\|592853506\|gb\|GAXK01104038.1\|	7.993e-7	42.00	TSA: Calanus finmarchicus comp271928_c0_seq5 trans...	[more]
gi\|592853507\|gb\|GAXK01104037.1\|	8.199e-7	42.00	TSA: Calanus finmarchicus comp271928_c0_seq4 trans...	[more]
gi\|592853508\|gb\|GAXK01104036.1\|	8.203e-7	42.00	TSA: Calanus finmarchicus comp271928_c0_seq3 trans...	[more]

Pages

BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAP00000000208	9.651e-42	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s102:30879...	[more]
EMLSAP00000007457	1.904e-19	80.95	pep:novel supercontig:LSalAtl2s:LSalAtl2s427:16516...	[more]
EMLSAP00000007729	2.194e-15	75.61	pep:novel supercontig:LSalAtl2s:LSalAtl2s44:635264...	[more]
EMLSAP00000001112	1.412e-13	69.23	pep:novel supercontig:LSalAtl2s:LSalAtl2s1186:1258...	[more]
EMLSAP00000002861	2.127e-13	60.47	pep:novel supercontig:LSalAtl2s:LSalAtl2s1655:5806...	[more]
EMLSAP00000012117	3.439e-13	64.10	pep:novel supercontig:LSalAtl2s:LSalAtl2s86:629688...	[more]
EMLSAP00000012118	1.895e-11	58.14	pep:novel supercontig:LSalAtl2s:LSalAtl2s86:636325...	[more]
EMLSAP00000000266	5.052e-11	53.49	pep:novel supercontig:LSalAtl2s:LSalAtl2s1040:2470...	[more]
EMLSAP00000012120	7.717e-11	61.54	pep:novel supercontig:LSalAtl2s:LSalAtl2s86:692955...	[more]
EMLSAP00000011958	8.764e-11	59.57	pep:novel supercontig:LSalAtl2s:LSalAtl2s849:13656...	[more]

Pages

BLAST of EMLSAG00000000208 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000000208 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000000208 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000000208 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s102	supercontig	LSalAtl2s102:308799..309048 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s102-snap-gene-3.14
Biotype	protein_coding
Evidence	IEA
Note	Hypothetical protein

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000000208 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000000208	EMLSAT00000000208-696055	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s102:308799..309048+

gene from alignment at LSalAtl2s102:308799..309048+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000000208-682974 ID=EMLSAG00000000208-682974|Name=EMLSAG00000000208|organism=Lepeophtheirus salmonis|type=gene|length=250bp|location=Sequence derived from alignment at LSalAtl2s102:308799..309048+ (Lepeophtheirus salmonis)
ATGGAGAAAACTATCACGTTTTACTCTTTGCCCTTGACTCTTGGCATGCA
GACTCTTTTATCAGCAGGTAAAAGTTCGAAAGTATCTCATAGCTTTAAAA
TTTACTCATAATTATTTTGTAGGTCAATCATGTTCTACCACTGATGGACG
GATCTGCATATTTCCATTCAAATATCTTGGTATACCATATGATGGGTGTA
CAACTATCGATTATGGAAATACGGCATGGTGCGCTACATCCTTAGACTGA

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