EMLSAG00000000208, EMLSAG00000000208-682974 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000000208
Unique Name	EMLSAG00000000208-682974
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000000208 vs. GO
Match: - (symbol:IGF2R "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0001948 "glycoprotein binding" evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA] [GO:0005520 "insulin-like growth factor binding" evidence=IEA] [GO:0005537 "mannose binding" evidence=IEA] [GO:0005641 "nuclear envelope lumen" evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030140 "trans-Golgi network transport vesicle" evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA] InterPro:IPR000479 Pfam:PF00878 GO:GO:0016021 GO:GO:0005737 GO:GO:0005215 InterPro:IPR013806 SUPFAM:SSF57440 InterPro:IPR009011 SUPFAM:SSF50911 Gene3D:2.10.10.10 InterPro:IPR000562 Pfam:PF00040 SMART:SM00059 PROSITE:PS00023 PROSITE:PS51092 OrthoDB:EOG74BJRG TreeFam:TF328963 GeneTree:ENSGT00390000013943 EMBL:AADN03002983 PDB:2L21 PDBsum:2L21 Ensembl:ENSGALT00000018986 PRO:PR:F1NVD2 Uniprot:F1NVD2)

HSP 1 Score: 44.669 bits (104), Expect = 3.294e-5
Identity = 21/46 (45.65%), Postives = 27/46 (58.70%), Query Frame = 0

Query:   21 SAGQSCS--TTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            + G  C   T  G +C+FPFKY G  YD C T +  N  WCAT++D
Sbjct: 1958 TGGDRCPPVTEKGELCVFPFKYKGKSYDKCIT-EEKNRPWCATAVD 2002

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592771624|gb|GAXK01182944.1| (TSA: Calanus finmarchicus comp288222_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 50.8322 bits (120), Expect = 7.536e-8
Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = 0

Query:    6 TFYSLPLTLGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTT-IDYGNTAWCATSLD 64
            T  SL L + +    + GQ CSTTD   C+FPF YLG  YD CT   D     WCAT++D
Sbjct: 1543 TQNSLKLMVTLVIGTNLGQGCSTTDKDRCVFPFIYLGKTYDDCTRDSDPDGKRWCATNVD 1722

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592771625|gb|GAXK01182943.1| (TSA: Calanus finmarchicus comp288222_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 50.8322 bits (120), Expect = 7.548e-8
Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = 0

Query:    6 TFYSLPLTLGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTT-IDYGNTAWCATSLD 64
            T  SL L + +    + GQ CSTTD   C+FPF YLG  YD CT   D     WCAT++D
Sbjct: 1547 TQNSLKLMVTLVIGTNLGQGCSTTDKDRCVFPFIYLGKTYDDCTRDSDPDGKRWCATNVD 1726

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592771626|gb|GAXK01182942.1| (TSA: Calanus finmarchicus comp288222_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 50.8322 bits (120), Expect = 7.595e-8
Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = 0

Query:    6 TFYSLPLTLGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTT-IDYGNTAWCATSLD 64
            T  SL L + +    + GQ CSTTD   C+FPF YLG  YD CT   D     WCAT++D
Sbjct: 1572 TQNSLKLMVTLVIGTNLGQGCSTTDKDRCVFPFIYLGKTYDDCTRDSDPDGKRWCATNVD 1751

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592868234|gb|GAXK01089328.1| (TSA: Calanus finmarchicus comp891836_c0_seq13 transcribed RNA sequence)

HSP 1 Score: 45.8246 bits (107), Expect = 6.388e-7
Identity = 20/42 (47.62%), Postives = 26/42 (61.90%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTA-WCATSLD 64
            Q C T  G+ C+FPFKY G  +  CT  D  N A WCAT+++
Sbjct:   96 QGCQTARGKYCVFPFKYKGKAHSKCTKEDSKNGAYWCATAIE 221

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592868237|gb|GAXK01089325.1| (TSA: Calanus finmarchicus comp891836_c0_seq10 transcribed RNA sequence)

HSP 1 Score: 46.595 bits (109), Expect = 7.113e-7
Identity = 21/42 (50.00%), Postives = 26/42 (61.90%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTA-WCATSLD 64
            Q C T  G+ C+FPFKY G  +  CT  D  N A WCAT++D
Sbjct:  331 QGCQTASGKYCVFPFKYKGKAHSKCTKEDSKNGAYWCATAVD 456

HSP 2 Score: 37.7354 bits (86), Expect = 9.671e-4
Identity = 22/56 (39.29%), Postives = 28/56 (50.00%), Query Frame = 0

Query:   11 PLTLGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTA--WCATSLD 64
            PL + M       + C TT    CIFPFK+ G  Y  CT  DY +    WCAT ++
Sbjct:  133 PLEMDMD------EGCRTTKNEECIFPFKFRGRFYKSCTR-DYSDNGSPWCATQVN 279

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592853500|gb|GAXK01104044.1| (TSA: Calanus finmarchicus comp271928_c0_seq11 transcribed RNA sequence)

HSP 1 Score: 48.1358 bits (113), Expect = 7.477e-7
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 0

Query:   15 GMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
             +Q  +   QSC T +G  C+FPF Y G+ Y  CT++D     WCAT L+
Sbjct: 2033 AVQDTVCEHQSCYTQEGAECVFPFPYKGVTYQNCTSVDV-YLPWCATELN 2179

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592853501|gb|GAXK01104043.1| (TSA: Calanus finmarchicus comp271928_c0_seq10 transcribed RNA sequence)

HSP 1 Score: 48.1358 bits (113), Expect = 7.507e-7
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 0

Query:   15 GMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
             +Q  +   QSC T +G  C+FPF Y G+ Y  CT++D     WCAT L+
Sbjct: 2033 AVQDTVCEHQSCYTQEGAECVFPFPYKGVTYQNCTSVDV-YLPWCATELN 2179

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592853506|gb|GAXK01104038.1| (TSA: Calanus finmarchicus comp271928_c0_seq5 transcribed RNA sequence)

HSP 1 Score: 48.1358 bits (113), Expect = 7.993e-7
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 0

Query:   15 GMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
             +Q  +   QSC T +G  C+FPF Y G+ Y  CT++D     WCAT L+
Sbjct: 2033 AVQDTVCEHQSCYTQEGAECVFPFPYKGVTYQNCTSVDV-YLPWCATELN 2179

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592853507|gb|GAXK01104037.1| (TSA: Calanus finmarchicus comp271928_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 48.1358 bits (113), Expect = 8.199e-7
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 0

Query:   15 GMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
             +Q  +   QSC T +G  C+FPF Y G+ Y  CT++D     WCAT L+
Sbjct: 8414 AVQDTVCEHQSCYTQEGAECVFPFPYKGVTYQNCTSVDV-YLPWCATELN 8560

HSP 2 Score: 38.891 bits (89), Expect = 8.724e-4
Identity = 18/42 (42.86%), Postives = 25/42 (59.52%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTID-YGNTAWCATSLD 64
            + C  ++ + CIFPF+  G  YD CTTI    NT WC+  +D
Sbjct: 3335 RECRISEDQACIFPFRVGGRLYDKCTTIGTETNTPWCSLKVD 3460

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BLAST of EMLSAG00000000208 vs. C. finmarchicus
Match: gi|592853508|gb|GAXK01104036.1| (TSA: Calanus finmarchicus comp271928_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 48.1358 bits (113), Expect = 8.203e-7
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 0

Query:   15 GMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
             +Q  +   QSC T +G  C+FPF Y G+ Y  CT++D     WCAT L+
Sbjct: 8414 AVQDTVCEHQSCYTQEGAECVFPFPYKGVTYQNCTSVDV-YLPWCATELN 8560

HSP 2 Score: 38.891 bits (89), Expect = 8.728e-4
Identity = 18/42 (42.86%), Postives = 25/42 (59.52%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTID-YGNTAWCATSLD 64
            + C  ++ + CIFPF+  G  YD CTTI    NT WC+  +D
Sbjct: 3335 RECRISEDQACIFPFRVGGRLYDKCTTIGTETNTPWCSLKVD 3460

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BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000008914 (pep:novel supercontig:LSalAtl2s:LSalAtl2s554:782614:789074:-1 gene:EMLSAG00000008914 transcript:EMLSAT00000008914 description:"maker-LSalAtl2s554-snap-gene-8.12")

HSP 1 Score: 55.0694 bits (131), Expect = 1.024e-10
Identity = 23/38 (60.53%), Postives = 27/38 (71.05%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            C TTDG+ C+FPF Y G+ YD CTT+  G   WCATSL
Sbjct:  124 CRTTDGKSCVFPFIYSGVTYDSCTTVGNGGVKWCATSL 161

HSP 2 Score: 54.6842 bits (130), Expect = 1.751e-10
Identity = 23/39 (58.97%), Postives = 27/39 (69.23%), Query Frame = 0

Query:   25 SCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            +C+TTDG  CIFPF Y G+ YD CT +  G   WCATSL
Sbjct:  306 ACNTTDGESCIFPFIYSGVSYDSCTDVQNGGVKWCATSL 344

HSP 3 Score: 53.1434 bits (126), Expect = 5.167e-10
Identity = 22/38 (57.89%), Postives = 26/38 (68.42%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            C TTDG+ C+FPF Y G+ Y+ CT  D G   WCATSL
Sbjct:  180 CRTTDGKKCVFPFIYSGVSYNSCTDADNGGVNWCATSL 217

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BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000009997 (pep:novel supercontig:LSalAtl2s:LSalAtl2s655:209187:212093:1 gene:EMLSAG00000009997 transcript:EMLSAT00000009997 description:"maker-LSalAtl2s655-augustus-gene-2.3")

HSP 1 Score: 55.0694 bits (131), Expect = 1.155e-10
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 0

Query:   20 LSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCAT 61
            ++ G +C+T DG  C FPFKY GI Y+GCT +D G+  WC+T
Sbjct:  288 VTPGSNCTTVDGNNCYFPFKYNGISYEGCTNVDNGDEYWCST 329

HSP 2 Score: 52.373 bits (124), Expect = 1.057e-9
Identity = 22/44 (50.00%), Postives = 30/44 (68.18%), Query Frame = 0

Query:   19 LLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATS 62
            +LS   +C TT G  C+FPF Y GI +D CTT+D+  T WC+T+
Sbjct:   16 VLSTSATCPTTSGETCVFPFVYSGITFDNCTTLDFSGTFWCSTN 59

HSP 3 Score: 51.9878 bits (123), Expect = 1.525e-9
Identity = 20/42 (47.62%), Postives = 29/42 (69.05%), Query Frame = 0

Query:   20 LSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCAT 61
            ++ G +C+  +G  C FPFKY GI Y+GCT +D G+  WC+T
Sbjct:   82 VTPGSNCTAVNGNYCEFPFKYNGISYEGCTNVDNGDEYWCST 123

HSP 4 Score: 50.0618 bits (118), Expect = 7.524e-9
Identity = 21/42 (50.00%), Postives = 27/42 (64.29%), Query Frame = 0

Query:   23 GQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
              SC +T+G  C+FPF Y GI Y+ CTTI+     WCAT +D
Sbjct:  149 ANSCGSTNGNPCVFPFVYNGITYNNCTTIENSGVYWCATKVD 190

HSP 5 Score: 48.9062 bits (115), Expect = 1.924e-8
Identity = 20/42 (47.62%), Postives = 27/42 (64.29%), Query Frame = 0

Query:   23 GQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
              +C +T+G  C+FPF Y GI Y+ CTTI+     WCAT +D
Sbjct:  355 ANTCGSTNGNPCVFPFVYNGITYNNCTTIENSGVYWCATKVD 396

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BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000001177 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1194:74273:74918:-1 gene:EMLSAG00000001177 transcript:EMLSAT00000001177 description:"snap_masked-LSalAtl2s1194-processed-gene-1.10")

HSP 1 Score: 51.9878 bits (123), Expect = 1.438e-10
Identity = 24/50 (48.00%), Postives = 28/50 (56.00%), Query Frame = 0

Query:   14 LGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            +G  T    G  C TT G  C+FPF YLGI Y  CT ++     WCATSL
Sbjct:   16 IGSTTKKPLGNKCQTTQGVDCVFPFIYLGISYFSCTNVENNGVEWCATSL 65

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BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000012082 (pep:novel supercontig:LSalAtl2s:LSalAtl2s863:28383:188758:-1 gene:EMLSAG00000012082 transcript:EMLSAT00000012082 description:"maker-LSalAtl2s863-augustus-gene-1.24")

HSP 1 Score: 55.4546 bits (132), Expect = 1.615e-10
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            C T+ G+ CIFPF Y G  Y+ CTT+D G T WCATS+D
Sbjct: 1376 CQTSTGKACIFPFVYSGQRYENCTTVDNGGTKWCATSVD 1414

HSP 2 Score: 55.4546 bits (132), Expect = 1.932e-10
Identity = 21/39 (53.85%), Postives = 28/39 (71.79%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            C T+ G+ C+FPF Y G+ Y+ CT +D G T WCATS+D
Sbjct: 1707 CQTSTGKACVFPFVYAGVRYNQCTAVDNGGTKWCATSVD 1745

HSP 3 Score: 54.6842 bits (130), Expect = 3.067e-10
Identity = 21/39 (53.85%), Postives = 28/39 (71.79%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            C T+ G+ C+FPF Y G+ Y+ CT +D G T WCATS+D
Sbjct: 1611 CQTSTGKACVFPFVYAGVMYNQCTAVDNGGTKWCATSVD 1649

HSP 4 Score: 54.299 bits (129), Expect = 4.867e-10
Identity = 20/40 (50.00%), Postives = 28/40 (70.00%), Query Frame = 0

Query:   25 SCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
             C ++ G+ C+FPF Y G+ Y+ CT +D G T WCATS+D
Sbjct: 1489 KCQSSTGKACVFPFVYAGVTYNQCTAVDNGGTKWCATSVD 1528

HSP 5 Score: 53.1434 bits (126), Expect = 1.190e-9
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            C +T+G+ C+FPFKY G  YD CTT + G T WCATS+
Sbjct: 1170 CYSTNGQKCVFPFKYKGETYDKCTTAENGGTPWCATSV 1207

HSP 6 Score: 51.9878 bits (123), Expect = 2.385e-9
Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            CS+T+G+ C+FPFKY G  YD CTT + G   WCA S+
Sbjct: 1297 CSSTNGQKCVFPFKYKGETYDKCTTAENGGIPWCANSV 1334

HSP 7 Score: 51.6026 bits (122), Expect = 3.997e-9
Identity = 21/40 (52.50%), Postives = 26/40 (65.00%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            + C +T+G+ C+FPFKY G  Y  CTT D G   WCA SL
Sbjct: 1003 KGCVSTNGKTCVFPFKYKGDTYSKCTTADNGGVPWCANSL 1042

HSP 8 Score: 51.2174 bits (121), Expect = 4.268e-9
Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 0

Query:   22 AGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            A   C T  G++C+FPF Y G  Y  CT++D G   WCATS+D
Sbjct: 1065 APNQCQTLTGKLCVFPFMYNGQSYTNCTSVDNGGIKWCATSVD 1107

HSP 9 Score: 49.6766 bits (117), Expect = 1.890e-8
Identity = 22/38 (57.89%), Postives = 25/38 (65.79%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            CSTT G  CIFPFKY G  Y  CTTI+     WCAT++
Sbjct:  882 CSTTSGGKCIFPFKYKGETYQACTTIENSGVPWCATTV 919

HSP 10 Score: 48.9062 bits (115), Expect = 2.573e-8
Identity = 22/40 (55.00%), Postives = 26/40 (65.00%), Query Frame = 0

Query:   24 QSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            ++CSTT G  CIFPFKY    Y+ CT  + G   WCATSL
Sbjct: 1545 KACSTTSGVKCIFPFKYKEHTYNKCTVAENGGVPWCATSL 1584

HSP 11 Score: 46.9802 bits (110), Expect = 1.453e-7
Identity = 20/41 (48.78%), Postives = 24/41 (58.54%), Query Frame = 0

Query:   23 GQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            G  CS T+ + C+ PF Y G  YD CT  + G   WCATSL
Sbjct: 1423 GNFCSATNSQKCVIPFNYKGETYDKCTIAENGGVPWCATSL 1463

HSP 12 Score: 45.8246 bits (107), Expect = 3.138e-7
Identity = 18/38 (47.37%), Postives = 23/38 (60.53%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            C  + G+ C+FPF Y G  Y+ CT ID     WCATS+
Sbjct:  948 CQASTGKACVFPFVYSGXXYNECTXIDNNGVKWCATSV 985

[Close]

BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000006207 (pep:novel supercontig:LSalAtl2s:LSalAtl2s339:71387:73151:-1 gene:EMLSAG00000006207 transcript:EMLSAT00000006207 description:"maker-LSalAtl2s339-augustus-gene-0.17")

HSP 1 Score: 54.299 bits (129), Expect = 2.060e-10
Identity = 25/46 (54.35%), Postives = 30/46 (65.22%), Query Frame = 0

Query:   19 LLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            +L+  Q C+  +G  C FPF Y G  Y  CTTIDY NT WCATS+D
Sbjct:  342 VLTVVQGCTILNGTACQFPFNYRGKTYTTCTTIDYRNTPWCATSVD 387

HSP 2 Score: 51.6026 bits (122), Expect = 2.058e-9
Identity = 27/57 (47.37%), Postives = 30/57 (52.63%), Query Frame = 0

Query:    8 YSLPLTLGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            Y + L L   ++      C TT G  CIFPF Y G  Y  CTTIDY    WCATSL 
Sbjct:   10 YIVILALCCSSINGVKGKCPTTAGDQCIFPFNYGGKTYQACTTIDYNGVYWCATSLH 66

HSP 3 Score: 50.447 bits (119), Expect = 4.534e-9
Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 0

Query:   25 SCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            +C TT+G+ C FPF Y G  Y+ CTT+DY    WCATSL+
Sbjct:  285 ACPTTNGQQCRFPFVYRGQTYNKCTTVDYEGVYWCATSLE 324

HSP 4 Score: 46.9802 bits (110), Expect = 8.657e-8
Identity = 23/55 (41.82%), Postives = 32/55 (58.18%), Query Frame = 0

Query:   10 LPLTLGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            L  T  + T+ SA   CST+ G  C FPF Y G  +  CTT++ G+  WCAT ++
Sbjct:  207 LRKTTEVVTVTSAPTRCSTSTGENCQFPFSYDGQTFHQCTTVENGDQPWCATYVN 261

HSP 5 Score: 46.595 bits (109), Expect = 1.291e-7
Identity = 21/43 (48.84%), Postives = 26/43 (60.47%), Query Frame = 0

Query:   22 AGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            +G SC TT  + CIFPF Y    Y+ CT +D     WCATS+D
Sbjct:   86 SGNSCKTTANQSCIFPFVYNSQIYNTCTVVDNSGIPWCATSVD 128

[Close]

BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000010902 (pep:novel supercontig:LSalAtl2s:LSalAtl2s729:156015:158047:1 gene:EMLSAG00000010902 transcript:EMLSAT00000010902 description:"augustus_masked-LSalAtl2s729-processed-gene-1.0")

HSP 1 Score: 54.299 bits (129), Expect = 2.520e-10
Identity = 24/47 (51.06%), Postives = 30/47 (63.83%), Query Frame = 0

Query:   18 TLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            T +++G  C+ TDG  CIFPF Y G  Y  CT +D   T WCATS+D
Sbjct:  161 TGVTSGNGCTXTDGNSCIFPFVYNGKTYSTCTVVDNSGTPWCATSVD 207

HSP 2 Score: 51.2174 bits (121), Expect = 2.479e-9
Identity = 21/39 (53.85%), Postives = 26/39 (66.67%), Query Frame = 0

Query:   25 SCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            +C+TT G  C+FPFKY G  Y  CT++DY    WC TSL
Sbjct:   27 NCATTAGDKCVFPFKYRGNTYQDCTSVDYNGVXWCPTSL 65

HSP 3 Score: 48.1358 bits (113), Expect = 3.205e-8
Identity = 21/38 (55.26%), Postives = 25/38 (65.79%), Query Frame = 0

Query:   26 CSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSL 63
            C  TD   C FPF Y G  Y+ CT +DYG+T WCATS+
Sbjct:  107 CKATDNLPCKFPFVYGGRTYNECTNVDYGSTFWCATSV 144

[Close]

BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000009481 (pep:novel supercontig:LSalAtl2s:LSalAtl2s611:1175:2265:1 gene:EMLSAG00000009481 transcript:EMLSAT00000009481 description:"maker-LSalAtl2s611-augustus-gene-0.5")

HSP 1 Score: 52.7582 bits (125), Expect = 2.714e-10
Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 0

Query:   25 SCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            SC T + + CIFPFKY G+ Y+ CT +D G T WCAT+L+
Sbjct:  179 SCHTLENQQCIFPFKYYGVTYNACTGVDNGGTLWCATTLN 218

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BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000005316 (pep:novel supercontig:LSalAtl2s:LSalAtl2s28489:1:355:-1 gene:EMLSAG00000005316 transcript:EMLSAT00000005316 description:"maker-LSalAtl2s28489-augustus-gene-0.0")

HSP 1 Score: 50.447 bits (119), Expect = 6.227e-10
Identity = 21/40 (52.50%), Postives = 27/40 (67.50%), Query Frame = 0

Query:   25 SCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            +C T+ G+ C+FPF   G  YD CT +D G T WCATS+D
Sbjct:    7 ACQTSTGKACVFPFVXSGQTYDKCTAVDNGGTQWCATSVD 46

HSP 2 Score: 48.1358 bits (113), Expect = 3.969e-9
Identity = 22/42 (52.38%), Postives = 27/42 (64.29%), Query Frame = 0

Query:   19 LLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCA 60
            + S  + CS+T G  C+FPFKY G  YD CTT + G T WCA
Sbjct:   58 VESTCKVCSSTXGXKCVFPFKYKGETYDKCTTAENGGTPWCA 99

[Close]

BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000010149 (pep:novel supercontig:LSalAtl2s:LSalAtl2s670:196644:276285:-1 gene:EMLSAG00000010149 transcript:EMLSAT00000010149 description:"maker-LSalAtl2s670-augustus-gene-2.11")

HSP 1 Score: 53.5286 bits (127), Expect = 7.585e-10
Identity = 21/40 (52.50%), Postives = 26/40 (65.00%), Query Frame = 0

Query:   25 SCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            SC TT+G+ CI PF Y  + YD CT +D     WCAT+LD
Sbjct:  674 SCLTTEGQACILPFIYYDVKYDKCTNVDNNGLKWCATTLD 713

[Close]

BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Match: EMLSAP00000010532 (pep:novel supercontig:LSalAtl2s:LSalAtl2s6:116487:117032:-1 gene:EMLSAG00000010532 transcript:EMLSAT00000010532 description:"maker-LSalAtl2s6-augustus-gene-1.6")

HSP 1 Score: 49.2914 bits (116), Expect = 1.874e-9
Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 0

Query:   10 LPLTLGMQTLLSAGQSCSTTDGRICIFPFKYLGIPYDGCTTIDYGNTAWCATSLD 64
            L +    Q     G+SC TTD + C+FPFK+    Y+ CT  D+ NT WCATS++
Sbjct:    5 LSIIFFAQLSWVYGESCQTTDNQGCVFPFKFRENTYNKCTKADW-NTYWCATSVN 58

The following BLAST results are available for this feature:

BLAST of EMLSAG00000000208 vs. GO
BLAST of EMLSAG00000000208 vs. C. finmarchicus
BLAST of EMLSAG00000000208 vs. L. salmonis peptides
BLAST of EMLSAG00000000208 vs. SwissProt
BLAST of EMLSAG00000000208 vs. Select Arthropod Genomes
BLAST of EMLSAG00000000208 vs. nr
BLAST of EMLSAG00000000208 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000000208 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 1


Match Name	E-value	Identity	Description
-	3.294e-5	45.65	symbol:IGF2R "Uncharacterized protein" species:903...	[more]

BLAST of EMLSAG00000000208 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592771624\|gb\|GAXK01182944.1\|	7.536e-8	46.67	TSA: Calanus finmarchicus comp288222_c0_seq3 trans...	[more]
gi\|592771625\|gb\|GAXK01182943.1\|	7.548e-8	46.67	TSA: Calanus finmarchicus comp288222_c0_seq2 trans...	[more]
gi\|592771626\|gb\|GAXK01182942.1\|	7.595e-8	46.67	TSA: Calanus finmarchicus comp288222_c0_seq1 trans...	[more]
gi\|592868234\|gb\|GAXK01089328.1\|	6.388e-7	47.62	TSA: Calanus finmarchicus comp891836_c0_seq13 tran...	[more]
gi\|592868237\|gb\|GAXK01089325.1\|	7.113e-7	50.00	TSA: Calanus finmarchicus comp891836_c0_seq10 tran...	[more]
gi\|592853500\|gb\|GAXK01104044.1\|	7.477e-7	42.00	TSA: Calanus finmarchicus comp271928_c0_seq11 tran...	[more]
gi\|592853501\|gb\|GAXK01104043.1\|	7.507e-7	42.00	TSA: Calanus finmarchicus comp271928_c0_seq10 tran...	[more]
gi\|592853506\|gb\|GAXK01104038.1\|	7.993e-7	42.00	TSA: Calanus finmarchicus comp271928_c0_seq5 trans...	[more]
gi\|592853507\|gb\|GAXK01104037.1\|	8.199e-7	42.00	TSA: Calanus finmarchicus comp271928_c0_seq4 trans...	[more]
gi\|592853508\|gb\|GAXK01104036.1\|	8.203e-7	42.00	TSA: Calanus finmarchicus comp271928_c0_seq3 trans...	[more]

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BLAST of EMLSAG00000000208 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAP00000008914	1.024e-10	60.53	pep:novel supercontig:LSalAtl2s:LSalAtl2s554:78261...	[more]
EMLSAP00000009997	1.155e-10	52.38	pep:novel supercontig:LSalAtl2s:LSalAtl2s655:20918...	[more]
EMLSAP00000001177	1.438e-10	48.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1194:7427...	[more]
EMLSAP00000012082	1.615e-10	58.97	pep:novel supercontig:LSalAtl2s:LSalAtl2s863:28383...	[more]
EMLSAP00000006207	2.060e-10	54.35	pep:novel supercontig:LSalAtl2s:LSalAtl2s339:71387...	[more]
EMLSAP00000010902	2.520e-10	51.06	pep:novel supercontig:LSalAtl2s:LSalAtl2s729:15601...	[more]
EMLSAP00000009481	2.714e-10	55.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s611:1175:...	[more]
EMLSAP00000005316	6.227e-10	52.50	pep:novel supercontig:LSalAtl2s:LSalAtl2s28489:1:3...	[more]
EMLSAP00000010149	7.585e-10	52.50	pep:novel supercontig:LSalAtl2s:LSalAtl2s670:19664...	[more]
EMLSAP00000010532	1.874e-9	43.64	pep:novel supercontig:LSalAtl2s:LSalAtl2s6:116487:...	[more]

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BLAST of EMLSAG00000000208 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000000208 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000000208 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000000208 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0


Match Name	E-value	Identity	Description

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s102	supercontig	LSalAtl2s102:308799..309048 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s102-snap-gene-3.14
Biotype	protein_coding
Evidence	IEA
Note	Hypothetical protein

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000000208 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000000208	EMLSAT00000000208-696055	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s102:308799..309048+

gene from alignment at LSalAtl2s102:308799..309048+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000000208-682974 ID=EMLSAG00000000208-682974|Name=EMLSAG00000000208|organism=Lepeophtheirus salmonis|type=gene|length=250bp|location=Sequence derived from alignment at LSalAtl2s102:308799..309048+ (Lepeophtheirus salmonis)
ATGGAGAAAACTATCACGTTTTACTCTTTGCCCTTGACTCTTGGCATGCA
GACTCTTTTATCAGCAGGTAAAAGTTCGAAAGTATCTCATAGCTTTAAAA
TTTACTCATAATTATTTTGTAGGTCAATCATGTTCTACCACTGATGGACG
GATCTGCATATTTCCATTCAAATATCTTGGTATACCATATGATGGGTGTA
CAACTATCGATTATGGAAATACGGCATGGTGCGCTACATCCTTAGACTGA

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