EMLSAG00000000243, EMLSAG00000000243-683009 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000243 vs. GO
Match: - (symbol:MAU2 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0000785 "chromatin" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0032116 "SMC loading complex" evidence=IEA] [GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] InterPro:IPR011990 GO:GO:0005654 GO:GO:0000785 Gene3D:1.25.40.10 GO:GO:0034088 GO:GO:0032116 OMA:ISWTDGP OrthoDB:EOG7V49XZ InterPro:IPR019440 Pfam:PF10345 GeneTree:ENSGT00390000012198 TreeFam:TF105981 EMBL:DAAA02019030 PRIDE:F1MM05 Ensembl:ENSBTAT00000008054 Uniprot:F1MM05) HSP 1 Score: 44.669 bits (104), Expect = 2.188e-5 Identity = 20/36 (55.56%), Postives = 25/36 (69.44%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 +NCMD AE QF TALR++ ELW F +LA VY+ Sbjct: 392 VNCMDNAEAQFTTALRLTNHQELWAFIVTNLASVYI 427 HSP 2 Score: 41.5874 bits (96), Expect = 2.631e-4 Identity = 29/72 (40.28%), Postives = 37/72 (51.39%), Query Frame = 0 Query: 7 AENQFNTALRMSQDNELWTFADLSLA----IVYVTIN---------PPMQLASKISDLHVQLWASAILKELN 65 A+ L+MS +L SL I YV N P MQLASKI D+ VQLW+SA+L++LN Sbjct: 477 AKRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLN 548
BLAST of EMLSAG00000000243 vs. GO
Match: - (symbol:MAU2 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000785 "chromatin" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0032116 "SMC loading complex" evidence=IEA] [GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] InterPro:IPR011990 GO:GO:0005654 GO:GO:0000785 Gene3D:1.25.40.10 GO:GO:0034088 GO:GO:0032116 KO:K11266 OMA:ISWTDGP OrthoDB:EOG7V49XZ InterPro:IPR019440 Pfam:PF10345 GeneTree:ENSGT00390000012198 CTD:23383 TreeFam:TF105981 EMBL:AAEX03012271 RefSeq:XP_541923.3 Ensembl:ENSCAFT00000022716 GeneID:484807 KEGG:cfa:484807 Uniprot:F1P830) HSP 1 Score: 44.669 bits (104), Expect = 2.210e-5 Identity = 20/36 (55.56%), Postives = 25/36 (69.44%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 +NCMD AE QF TALR++ ELW F +LA VY+ Sbjct: 392 VNCMDNAEAQFTTALRLTNHQELWAFIVTNLASVYI 427 HSP 2 Score: 41.5874 bits (96), Expect = 2.537e-4 Identity = 29/72 (40.28%), Postives = 37/72 (51.39%), Query Frame = 0 Query: 7 AENQFNTALRMSQDNELWTFADLSLA----IVYVTIN---------PPMQLASKISDLHVQLWASAILKELN 65 A+ L+MS +L SL I YV N P MQLASKI D+ VQLW+SA+L++LN Sbjct: 478 AKRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLN 549
BLAST of EMLSAG00000000243 vs. GO
Match: - (symbol:Mau2 "MAU2 chromatid cohesion factor homolog (C. elegans)" species:10090 "Mus musculus" [GO:0000785 "chromatin" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0032116 "SMC loading complex" evidence=ISO] [GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=ISO] [GO:0047485 "protein N-terminus binding" evidence=ISO] [GO:0051301 "cell division" evidence=IEA] InterPro:IPR011990 MGI:MGI:1921799 GO:GO:0005654 GO:GO:0000785 Gene3D:1.25.40.10 GO:GO:0034088 GO:GO:0032116 eggNOG:NOG298336 KO:K11266 OrthoDB:EOG7V49XZ InterPro:IPR019440 Pfam:PF10345 GeneTree:ENSGT00390000012198 CTD:23383 EMBL:AK018662 EMBL:AK049277 EMBL:AK081967 EMBL:BC023401 EMBL:BC125568 EMBL:BC132139 EMBL:BC144990 EMBL:AK220358 RefSeq:NP_001161411.1 RefSeq:NP_083269.4 RefSeq:XP_006509839.1 UniGene:Mm.269061 ProteinModelPortal:Q9D2X5 SMR:Q9D2X5 BioGrid:216835 IntAct:Q9D2X5 STRING:10090.ENSMUSP00000054763 PhosphoSite:Q9D2X5 PaxDb:Q9D2X5 PRIDE:Q9D2X5 Ensembl:ENSMUST00000050561 GeneID:74549 KEGG:mmu:74549 UCSC:uc009lyj.2 UCSC:uc009lyk.2 InParanoid:Q059Q4 NextBio:341058 PRO:PR:Q9D2X5 Bgee:Q9D2X5 CleanEx:MM_9130404D08RIK Genevestigator:Q9D2X5 Uniprot:Q9D2X5) HSP 1 Score: 44.669 bits (104), Expect = 2.218e-5 Identity = 20/36 (55.56%), Postives = 25/36 (69.44%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 +NCMD AE QF TALR++ ELW F +LA VY+ Sbjct: 398 VNCMDNAEAQFTTALRLTNHQELWAFIVTNLASVYI 433 HSP 2 Score: 41.5874 bits (96), Expect = 2.739e-4 Identity = 29/72 (40.28%), Postives = 37/72 (51.39%), Query Frame = 0 Query: 7 AENQFNTALRMSQDNELWTFADLSLA----IVYVTIN---------PPMQLASKISDLHVQLWASAILKELN 65 A+ L+MS +L SL I YV N P MQLASKI D+ VQLW+SA+L++LN Sbjct: 484 AKRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLN 555
BLAST of EMLSAG00000000243 vs. GO
Match: - (symbol:MAU2 "MAU2 chromatid cohesion factor homolog" species:9606 "Homo sapiens" [GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000785 "chromatin" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA;TAS] [GO:0032116 "SMC loading complex" evidence=IMP;IDA] [GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=IMP] [GO:0047485 "protein N-terminus binding" evidence=IPI] InterPro:IPR011990 Reactome:REACT_115566 GO:GO:0005654 GO:GO:0000785 Reactome:REACT_21300 Gene3D:1.25.40.10 GO:GO:0034088 GO:GO:0032116 eggNOG:NOG298336 HOGENOM:HOG000008037 KO:K11266 OMA:ISWTDGP OrthoDB:EOG7V49XZ InterPro:IPR019440 Pfam:PF10345 EMBL:AB020699 EMBL:AK126227 EMBL:AC022543 EMBL:BC010222 EMBL:BC063863 EMBL:AL110250 PIR:T14778 RefSeq:NP_056144.3 UniGene:Hs.654939 UniGene:Hs.744479 ProteinModelPortal:Q9Y6X3 BioGrid:116959 DIP:DIP-29196N IntAct:Q9Y6X3 MINT:MINT-2824314 STRING:9606.ENSP00000376127 PhosphoSite:Q9Y6X3 DMDM:118597347 PaxDb:Q9Y6X3 PRIDE:Q9Y6X3 DNASU:23383 Ensembl:ENST00000392313 GeneID:23383 KEGG:hsa:23383 UCSC:uc002nmk.4 UCSC:uc002nml.4 UCSC:uc010ece.3 CTD:23383 GeneCards:GC19P019433 HGNC:HGNC:29140 HPA:HPA048223 MIM:614560 neXtProt:NX_Q9Y6X3 PharmGKB:PA134991458 InParanoid:Q9Y6X3 TreeFam:TF105981 ChiTaRS:MAU2 GenomeRNAi:23383 NextBio:45492 PRO:PR:Q9Y6X3 ArrayExpress:Q9Y6X3 Bgee:Q9Y6X3 CleanEx:HS_KIAA0892 Genevestigator:Q9Y6X3 Uniprot:Q9Y6X3) HSP 1 Score: 44.669 bits (104), Expect = 2.231e-5 Identity = 20/36 (55.56%), Postives = 25/36 (69.44%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 +NCMD AE QF TALR++ ELW F +LA VY+ Sbjct: 392 VNCMDNAEAQFTTALRLTNHQELWAFIVTNLASVYI 427 HSP 2 Score: 41.5874 bits (96), Expect = 2.731e-4 Identity = 29/72 (40.28%), Postives = 37/72 (51.39%), Query Frame = 0 Query: 7 AENQFNTALRMSQDNELWTFADLSLA----IVYVTIN---------PPMQLASKISDLHVQLWASAILKELN 65 A+ L+MS +L SL I YV N P MQLASKI D+ VQLW+SA+L++LN Sbjct: 478 AKRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLN 549
BLAST of EMLSAG00000000243 vs. GO
Match: - (symbol:MAU2 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0000785 "chromatin" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0032116 "SMC loading complex" evidence=IEA] [GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=IEA] [GO:0047485 "protein N-terminus binding" evidence=IEA] InterPro:IPR011990 GO:GO:0005654 GO:GO:0000785 Gene3D:1.25.40.10 GO:GO:0034088 GO:GO:0032116 KO:K11266 OrthoDB:EOG7V49XZ InterPro:IPR019440 Pfam:PF10345 GeneTree:ENSGT00390000012198 CTD:23383 TreeFam:TF105981 EMBL:AADN03008900 RefSeq:XP_425908.2 UniGene:Gga.20253 Ensembl:ENSGALT00000004696 GeneID:428348 KEGG:gga:428348 Uniprot:F1N9E5) HSP 1 Score: 44.669 bits (104), Expect = 2.250e-5 Identity = 20/36 (55.56%), Postives = 25/36 (69.44%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 +NCMD AE QF TALR++ ELW F +LA VY+ Sbjct: 442 VNCMDNAEAQFTTALRLTTHQELWAFIVTNLASVYI 477 HSP 2 Score: 41.5874 bits (96), Expect = 2.645e-4 Identity = 29/72 (40.28%), Postives = 37/72 (51.39%), Query Frame = 0 Query: 7 AENQFNTALRMSQDNELWTFADLSLA----IVYVTIN---------PPMQLASKISDLHVQLWASAILKELN 65 A+ L+MS +L SL I YV N P MQLASKI D+ VQLW+SA+L++LN Sbjct: 527 AKRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLN 598
BLAST of EMLSAG00000000243 vs. C. finmarchicus
Match: gi|592771054|gb|GAXK01183514.1| (TSA: Calanus finmarchicus comp56121_c10_seq6 transcribed RNA sequence) HSP 1 Score: 56.9954 bits (136), Expect = 3.007e-10 Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCM+ AE+Q N ALR S++ ELWTFA+L+LAIVY+ Sbjct: 258 MNCMEAAESQLNAALRTSKERELWTFANLNLAIVYL 365
BLAST of EMLSAG00000000243 vs. C. finmarchicus
Match: gi|592771055|gb|GAXK01183513.1| (TSA: Calanus finmarchicus comp56121_c10_seq5 transcribed RNA sequence) HSP 1 Score: 56.9954 bits (136), Expect = 3.159e-10 Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCM+ AE+Q N ALR S++ ELWTFA+L+LAIVY+ Sbjct: 258 MNCMEAAESQLNAALRTSKERELWTFANLNLAIVYL 365
BLAST of EMLSAG00000000243 vs. C. finmarchicus
Match: gi|592771056|gb|GAXK01183512.1| (TSA: Calanus finmarchicus comp56121_c10_seq4 transcribed RNA sequence) HSP 1 Score: 56.9954 bits (136), Expect = 4.797e-10 Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCM+ AE+Q N ALR S++ ELWTFA+L+LAIVY+ Sbjct: 717 MNCMEAAESQLNAALRTSKERELWTFANLNLAIVYL 824 HSP 2 Score: 47.3654 bits (111), Expect = 8.502e-7 Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKEL 64 + P MQLASKI D+HVQLWASAILK+L Sbjct: 363 VTPAMQLASKIPDVHVQLWASAILKDL 443
BLAST of EMLSAG00000000243 vs. C. finmarchicus
Match: gi|592771057|gb|GAXK01183511.1| (TSA: Calanus finmarchicus comp56121_c10_seq3 transcribed RNA sequence) HSP 1 Score: 56.9954 bits (136), Expect = 4.797e-10 Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCM+ AE+Q N ALR S++ ELWTFA+L+LAIVY+ Sbjct: 717 MNCMEAAESQLNAALRTSKERELWTFANLNLAIVYL 824 HSP 2 Score: 47.3654 bits (111), Expect = 8.502e-7 Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKEL 64 + P MQLASKI D+HVQLWASAILK+L Sbjct: 363 VTPAMQLASKIPDVHVQLWASAILKDL 443
BLAST of EMLSAG00000000243 vs. C. finmarchicus
Match: gi|592771058|gb|GAXK01183510.1| (TSA: Calanus finmarchicus comp56121_c10_seq2 transcribed RNA sequence) HSP 1 Score: 56.9954 bits (136), Expect = 4.886e-10 Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCM+ AE+Q N ALR S++ ELWTFA+L+LAIVY+ Sbjct: 717 MNCMEAAESQLNAALRTSKERELWTFANLNLAIVYL 824 HSP 2 Score: 47.3654 bits (111), Expect = 8.607e-7 Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKEL 64 + P MQLASKI D+HVQLWASAILK+L Sbjct: 363 VTPAMQLASKIPDVHVQLWASAILKDL 443
BLAST of EMLSAG00000000243 vs. C. finmarchicus
Match: gi|592771059|gb|GAXK01183509.1| (TSA: Calanus finmarchicus comp56121_c10_seq1 transcribed RNA sequence) HSP 1 Score: 56.9954 bits (136), Expect = 4.886e-10 Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCM+ AE+Q N ALR S++ ELWTFA+L+LAIVY+ Sbjct: 717 MNCMEAAESQLNAALRTSKERELWTFANLNLAIVYL 824 HSP 2 Score: 47.3654 bits (111), Expect = 8.607e-7 Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKEL 64 + P MQLASKI D+HVQLWASAILK+L Sbjct: 363 VTPAMQLASKIPDVHVQLWASAILKDL 443
BLAST of EMLSAG00000000243 vs. C. finmarchicus
Match: gi|592771078|gb|GAXK01183490.1| (TSA: Calanus finmarchicus comp56121_c1_seq1 transcribed RNA sequence) HSP 1 Score: 56.9954 bits (136), Expect = 5.407e-10 Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCM+ AE+Q N ALR S++ ELWTFA+L+LAIVY+ Sbjct: 1234 MNCMEAAESQLNAALRTSKERELWTFANLNLAIVYL 1341
BLAST of EMLSAG00000000243 vs. C. finmarchicus
Match: gi|592771102|gb|GAXK01183466.1| (TSA: Calanus finmarchicus comp57677_c1_seq2 transcribed RNA sequence) HSP 1 Score: 27.335 bits (59), Expect = 3.671e+0 Identity = 12/28 (42.86%), Postives = 19/28 (67.86%), Query Frame = 0 Query: 5 DVAENQFNTALRMSQDNELWTFADLSLA 32 +V +NQ+N +SQ +ELW ADL ++ Sbjct: 941 NVMQNQYNFCSYLSQCHELWEQADLYVS 1024
BLAST of EMLSAG00000000243 vs. C. finmarchicus
Match: gi|592771103|gb|GAXK01183465.1| (TSA: Calanus finmarchicus comp57677_c1_seq1 transcribed RNA sequence) HSP 1 Score: 27.335 bits (59), Expect = 3.671e+0 Identity = 12/28 (42.86%), Postives = 19/28 (67.86%), Query Frame = 0 Query: 5 DVAENQFNTALRMSQDNELWTFADLSLA 32 +V +NQ+N +SQ +ELW ADL ++ Sbjct: 959 NVMQNQYNFCSYLSQCHELWEQADLYVS 1042
BLAST of EMLSAG00000000243 vs. C. finmarchicus
Match: gi|592910950|gb|GAXK01047425.1| (TSA: Calanus finmarchicus comp74504_c0_seq3 transcribed RNA sequence) HSP 1 Score: 26.9498 bits (58), Expect = 5.005e+0 Identity = 12/26 (46.15%), Postives = 15/26 (57.69%), Query Frame = 0 Query: 4 MDVAENQFNTALRMSQDNELWTFADL 29 MDV N+FNT+L +S N DL Sbjct: 395 MDVLRNKFNTSLHISTSNTTIELEDL 472
BLAST of EMLSAG00000000243 vs. L. salmonis peptides
Match: EMLSAP00000000243 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1036:152470:152790:1 gene:EMLSAG00000000243 transcript:EMLSAT00000000243 description:"snap_masked-LSalAtl2s1036-processed-gene-0.9") HSP 1 Score: 134.035 bits (336), Expect = 1.521e-42 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYVTINPPMQLASKISDLHVQLWASAILKELN 65 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYVTINPPMQLASKISDLHVQLWASAILKELN Sbjct: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYVTINPPMQLASKISDLHVQLWASAILKELN 65
BLAST of EMLSAG00000000243 vs. L. salmonis peptides
Match: EMLSAP00000003584 (pep:novel supercontig:LSalAtl2s:LSalAtl2s196:30861:33965:1 gene:EMLSAG00000003584 transcript:EMLSAT00000003584 description:"maker-LSalAtl2s196-augustus-gene-0.9") HSP 1 Score: 66.2402 bits (160), Expect = 2.716e-14 Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCMD AENQFN ALR SQ+ ELWTFA+L+LAIVYV Sbjct: 396 MNCMDAAENQFNAALRTSQERELWTFANLNLAIVYV 431 HSP 2 Score: 52.7582 bits (125), Expect = 1.073e-9 Identity = 24/28 (85.71%), Postives = 26/28 (92.86%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKELN 65 +NP MQLASKI DLHVQLWASAILK+LN Sbjct: 523 VNPAMQLASKIPDLHVQLWASAILKDLN 550
BLAST of EMLSAG00000000243 vs. SwissProt
Match: gi|257096781|sp|B4GF49.1|SCC4_DROPE (RecName: Full=MAU2 chromatid cohesion factor homolog; AltName: Full=Cohesin loading complex subunit SCC4 homolog >gi|257096801|sp|Q296H8.2|SCC4_DROPS RecName: Full=MAU2 chromatid cohesion factor homolog; AltName: Full=Cohesin loading complex subunit SCC4 homolog) HSP 1 Score: 47.3654 bits (111), Expect = 6.960e-7 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKELN 65 + P MQLASKI D+HVQLW SAILK+L+ Sbjct: 515 VTPAMQLASKIPDIHVQLWGSAILKDLH 542
BLAST of EMLSAG00000000243 vs. SwissProt
Match: gi|257096784|sp|B4M4L4.1|SCC4_DROVI (RecName: Full=MAU2 chromatid cohesion factor homolog; AltName: Full=Cohesin loading complex subunit SCC4 homolog) HSP 1 Score: 46.9802 bits (110), Expect = 7.382e-7 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKELN 65 + P MQLASKI D+HVQLW SAILK+L+ Sbjct: 514 VTPAMQLASKIPDIHVQLWGSAILKDLH 541
BLAST of EMLSAG00000000243 vs. SwissProt
Match: gi|257096779|sp|B4JHK2.1|SCC4_DROGR (RecName: Full=MAU2 chromatid cohesion factor homolog; AltName: Full=Cohesin loading complex subunit SCC4 homolog) HSP 1 Score: 46.9802 bits (110), Expect = 7.383e-7 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKELN 65 + P MQLASKI D+HVQLW SAILK+L+ Sbjct: 514 VTPAMQLASKIPDIHVQLWGSAILKDLH 541
BLAST of EMLSAG00000000243 vs. SwissProt
Match: gi|257096780|sp|B4K4X6.1|SCC4_DROMO (RecName: Full=MAU2 chromatid cohesion factor homolog; AltName: Full=Cohesin loading complex subunit SCC4 homolog) HSP 1 Score: 46.9802 bits (110), Expect = 7.456e-7 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKELN 65 + P MQLASKI D+HVQLW SAILK+L+ Sbjct: 514 VTPAMQLASKIPDIHVQLWGSAILKDLH 541
BLAST of EMLSAG00000000243 vs. SwissProt
Match: gi|257096777|sp|B3M1B7.1|SCC4_DROAN (RecName: Full=MAU2 chromatid cohesion factor homolog; AltName: Full=Cohesin loading complex subunit SCC4 homolog) HSP 1 Score: 46.9802 bits (110), Expect = 7.991e-7 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKELN 65 + P MQLASKI D+HVQLW SAILK+L+ Sbjct: 516 VTPAMQLASKIPDIHVQLWGSAILKDLH 543
BLAST of EMLSAG00000000243 vs. SwissProt
Match: gi|257096743|sp|B4PS83.1|SCC4_DROYA (RecName: Full=MAU2 chromatid cohesion factor homolog; AltName: Full=Cohesin loading complex subunit SCC4 homolog) HSP 1 Score: 46.9802 bits (110), Expect = 8.067e-7 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKELN 65 + P MQLASKI D+HVQLW SAILK+L+ Sbjct: 516 VTPAMQLASKIPDIHVQLWGSAILKDLH 543
BLAST of EMLSAG00000000243 vs. SwissProt
Match: gi|257096798|sp|B4QZ45.2|SCC4_DROSI (RecName: Full=MAU2 chromatid cohesion factor homolog; AltName: Full=Cohesin loading complex subunit SCC4 homolog) HSP 1 Score: 46.9802 bits (110), Expect = 8.067e-7 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKELN 65 + P MQLASKI D+HVQLW SAILK+L+ Sbjct: 516 VTPAMQLASKIPDIHVQLWGSAILKDLH 543
BLAST of EMLSAG00000000243 vs. SwissProt
Match: gi|74868784|sp|Q9VFC0.1|SCC4_DROME (RecName: Full=MAU2 chromatid cohesion factor homolog; AltName: Full=Cohesin loading complex subunit SCC4 homolog) HSP 1 Score: 46.9802 bits (110), Expect = 8.147e-7 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKELN 65 + P MQLASKI D+HVQLW SAILK+L+ Sbjct: 516 VTPAMQLASKIPDIHVQLWGSAILKDLH 543
BLAST of EMLSAG00000000243 vs. SwissProt
Match: gi|257096778|sp|B3P0R4.1|SCC4_DROER (RecName: Full=MAU2 chromatid cohesion factor homolog; AltName: Full=Cohesin loading complex subunit SCC4 homolog) HSP 1 Score: 46.9802 bits (110), Expect = 8.147e-7 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKELN 65 + P MQLASKI D+HVQLW SAILK+L+ Sbjct: 516 VTPAMQLASKIPDIHVQLWGSAILKDLH 543
BLAST of EMLSAG00000000243 vs. SwissProt
Match: gi|257096783|sp|B4HE12.1|SCC4_DROSE (RecName: Full=MAU2 chromatid cohesion factor homolog; AltName: Full=Cohesin loading complex subunit SCC4 homolog) HSP 1 Score: 46.9802 bits (110), Expect = 8.390e-7 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKELN 65 + P MQLASKI D+HVQLW SAILK+L+ Sbjct: 516 VTPAMQLASKIPDIHVQLWGSAILKDLH 543
BLAST of EMLSAG00000000243 vs. Select Arthropod Genomes
Match: XP_394668.2 (PREDICTED: MAU2 chromatid cohesion factor homolog [Apis mellifera]) HSP 1 Score: 57.7658 bits (138), Expect = 6.546e-11 Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCM+ AE QF ALR SQ+ ELWTFA+L+LAIVY+ Sbjct: 378 MNCMEAAEAQFTAALRTSQERELWTFANLNLAIVYL 413
BLAST of EMLSAG00000000243 vs. Select Arthropod Genomes
Match: XP_006569495.1 (PREDICTED: MAU2 chromatid cohesion factor homolog [Apis mellifera]) HSP 1 Score: 57.7658 bits (138), Expect = 6.546e-11 Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCM+ AE QF ALR SQ+ ELWTFA+L+LAIVY+ Sbjct: 378 MNCMEAAEAQFTAALRTSQERELWTFANLNLAIVYL 413
BLAST of EMLSAG00000000243 vs. Select Arthropod Genomes
Match: EEB15813.1 (conserved hypothetical protein [Pediculus humanus corporis]) HSP 1 Score: 55.4546 bits (132), Expect = 3.732e-10 Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCM+ AE QF+ ALR S + ELWTFA+L+LAIVY+ Sbjct: 378 MNCMEAAEAQFHAALRTSTERELWTFANLNLAIVYL 413 HSP 2 Score: 46.9802 bits (110), Expect = 4.304e-7 Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKEL 64 + P MQLASKI D+HVQLWASAILK+L Sbjct: 505 VTPAMQLASKIPDVHVQLWASAILKDL 531
BLAST of EMLSAG00000000243 vs. Select Arthropod Genomes
Match: EFX74397.1 (hypothetical protein DAPPUDRAFT_307303 [Daphnia pulex]) HSP 1 Score: 53.5286 bits (127), Expect = 1.877e-9 Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYVTIN 39 MN M+ AE QFN ALR + D ELWTFA+L+LAIVY+ + Sbjct: 382 MNSMEAAEAQFNVALRSTTDRELWTFANLNLAIVYLRMK 420 HSP 2 Score: 46.595 bits (109), Expect = 5.141e-7 Identity = 20/27 (74.07%), Postives = 24/27 (88.89%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKEL 64 + P MQLASKI D+H+QLWASAILK+L Sbjct: 509 VTPAMQLASKIPDVHIQLWASAILKDL 535
BLAST of EMLSAG00000000243 vs. Select Arthropod Genomes
Match: gb|EFA06737.1| (MAU2 chromatid cohesion factor homolog-like Protein [Tribolium castaneum]) HSP 1 Score: 52.7582 bits (125), Expect = 4.061e-9 Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCM+ AE QF AL S++ ELWTFA+L+LAIVY+ Sbjct: 374 MNCMEAAEAQFMAALHTSRERELWTFANLNLAIVYL 409 HSP 2 Score: 46.9802 bits (110), Expect = 3.642e-7 Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKEL 64 + P MQLASKI D+HVQLWASAILK+L Sbjct: 501 VTPAMQLASKIPDVHVQLWASAILKDL 527
BLAST of EMLSAG00000000243 vs. Select Arthropod Genomes
Match: AAF55140.1 (Mau2 sister chromatid cohesion factor [Drosophila melanogaster]) HSP 1 Score: 46.9802 bits (110), Expect = 3.948e-7 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKELN 65 + P MQLASKI D+HVQLW SAILK+L+ Sbjct: 516 VTPAMQLASKIPDIHVQLWGSAILKDLH 543
BLAST of EMLSAG00000000243 vs. Select Arthropod Genomes
Match: EAA01134.4 (AGAP001363-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 46.9802 bits (110), Expect = 4.273e-7 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKELN 65 + P MQLASKI D+HVQLW SAILK+L+ Sbjct: 508 VTPAMQLASKIPDIHVQLWGSAILKDLH 535
BLAST of EMLSAG00000000243 vs. Select Arthropod Genomes
Match: gb|EEC13760.1| (conserved hypothetical protein [Ixodes scapularis]) HSP 1 Score: 46.2098 bits (108), Expect = 7.521e-7 Identity = 20/27 (74.07%), Postives = 24/27 (88.89%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKEL 64 + P MQLASKI D+HVQLWASA+LK+L Sbjct: 486 VTPAMQLASKIPDVHVQLWASALLKDL 512
BLAST of EMLSAG00000000243 vs. Select Arthropod Genomes
Match: gb|KFM59181.1| (MAU2 chromatid cohesion factor-like protein, partial [Stegodyphus mimosarum]) HSP 1 Score: 45.8246 bits (107), Expect = 8.825e-7 Identity = 20/27 (74.07%), Postives = 24/27 (88.89%), Query Frame = 0 Query: 38 INPPMQLASKISDLHVQLWASAILKEL 64 + P MQLASKI D+HVQLWASA+LK+L Sbjct: 398 VTPAMQLASKIPDVHVQLWASALLKDL 424
BLAST of EMLSAG00000000243 vs. nr
Match: gi|925680591|gb|KOX77396.1| (MAU2 chromatid cohesion factor like protein [Melipona quadrifasciata]) HSP 1 Score: 73.559 bits (179), Expect = 7.192e-14 Identity = 48/118 (40.68%), Postives = 55/118 (46.61%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV-------------TINP-----------------------------------------PMQLASKISDLHVQLWASAILKEL 64 MNCMD AE QF ALR SQ+ ELWTFA+L+LAIVY+ INP MQLASKI D+HVQLWA+AILK+L Sbjct: 378 MNCMDAAEAQFTAALRTSQERELWTFANLNLAIVYLRTKRDADLGALLERINPESLPSHSHSLRAAAYYVQGLQAFFGARYNEANRESMNMVTPAMQLASKIPDVHVQLWATAILKDL 495
BLAST of EMLSAG00000000243 vs. nr
Match: gi|944210550|gb|KQK77373.1| (MAU2 chromatid cohesion factor like protein [Amazona aestiva]) HSP 1 Score: 72.4034 bits (176), Expect = 1.939e-13 Identity = 38/77 (49.35%), Postives = 49/77 (63.64%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYVT------------INPPMQLASKISDLHVQLWASAILKELN 65 +NCMD AE QF TALR++ ELW F +LA VY+ + P MQLASKI D+ VQLW+SA+L++LN Sbjct: 250 VNCMDNAEAQFTTALRLTTHQELWAFIVTNLASVYIREGNRHQEESNNMVVPAMQLASKIPDMSVQLWSSALLRDLN 326
BLAST of EMLSAG00000000243 vs. nr
Match: gi|957845205|ref|XP_014673025.1| (PREDICTED: MAU2 chromatid cohesion factor homolog [Priapulus caudatus]) HSP 1 Score: 62.3882 bits (150), Expect = 6.243e-10 Identity = 27/39 (69.23%), Postives = 33/39 (84.62%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYVTIN 39 MNCM+ AE QFNTALR+S +NELWTF +L+LAIVY+ N Sbjct: 387 MNCMEAAETQFNTALRLSTENELWTFINLNLAIVYLRTN 425
BLAST of EMLSAG00000000243 vs. nr
Match: gi|1041547021|ref|XP_017302224.1| (PREDICTED: MAU2 chromatid cohesion factor homolog [Diaphorina citri]) HSP 1 Score: 59.3066 bits (142), Expect = 2.837e-9 Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCM+ AE QF ALR+SQ+ ELWTFA+L+LAIVY+ Sbjct: 138 MNCMEAAEAQFTAALRLSQERELWTFANLNLAIVYL 173
BLAST of EMLSAG00000000243 vs. nr
Match: gi|985399483|ref|XP_015367363.1| (PREDICTED: MAU2 chromatid cohesion factor homolog [Diuraphis noxia]) HSP 1 Score: 60.4622 bits (145), Expect = 3.165e-9 Identity = 26/36 (72.22%), Postives = 32/36 (88.89%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCMD AE QF T+LR+SQ+ ELWTFA+L+LAIVY+ Sbjct: 377 MNCMDAAEMQFTTSLRLSQERELWTFANLNLAIVYL 412
BLAST of EMLSAG00000000243 vs. nr
Match: gi|328706676|ref|XP_001943219.2| (PREDICTED: MAU2 chromatid cohesion factor homolog [Acyrthosiphon pisum]) HSP 1 Score: 60.4622 bits (145), Expect = 3.165e-9 Identity = 26/36 (72.22%), Postives = 32/36 (88.89%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCMD AE QF T+LR+SQ+ ELWTFA+L+LAIVY+ Sbjct: 377 MNCMDAAEMQFTTSLRLSQERELWTFANLNLAIVYL 412
BLAST of EMLSAG00000000243 vs. nr
Match: gi|752896472|ref|XP_011266495.1| (PREDICTED: MAU2 chromatid cohesion factor homolog [Camponotus floridanus] >gi|307168026|gb|EFN61350.1| Uncharacterized protein KIAA0892 [Camponotus floridanus]) HSP 1 Score: 60.077 bits (144), Expect = 4.903e-9 Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYVTINPPMQLAS 46 MNCM+ AE QFN ALR SQ+ ELWTFA+L+LAIVY+ +L + Sbjct: 378 MNCMEAAEAQFNAALRTSQERELWTFANLNLAIVYLRTKRDAELGA 423
BLAST of EMLSAG00000000243 vs. nr
Match: gi|751224826|ref|XP_011165774.1| (PREDICTED: MAU2 chromatid cohesion factor homolog [Solenopsis invicta] >gi|322788604|gb|EFZ14231.1| hypothetical protein SINV_09137, partial [Solenopsis invicta]) HSP 1 Score: 60.077 bits (144), Expect = 5.199e-9 Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MNCM+ AE QF ALRMSQ+ ELWTFA+L+LAIVY+ Sbjct: 378 MNCMEAAEAQFTAALRMSQERELWTFANLNLAIVYL 413
BLAST of EMLSAG00000000243 vs. nr
Match: gi|646706701|gb|KDR13808.1| (Cohesin loading complex subunit SCC4-like protein [Zootermopsis nevadensis]) HSP 1 Score: 59.3066 bits (142), Expect = 9.623e-9 Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYVTINPPMQLAS 46 MNCM+ AE QF ALR SQ+ ELWTFA+L+LAIVY+ +LA+ Sbjct: 378 MNCMEAAEAQFTAALRTSQERELWTFANLNLAIVYLRAKREQELAA 423
BLAST of EMLSAG00000000243 vs. nr
Match: gi|1058072726|gb|JAS40024.1| (hypothetical protein g.50633, partial [Cuerna arida]) HSP 1 Score: 57.3806 bits (137), Expect = 1.226e-8 Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYVTINPPMQLA 45 MNCM+ AE QF ALR+SQ+ +LWTFA+L+L IVY+ M+ A Sbjct: 20 MNCMEAAEAQFMAALRLSQERDLWTFANLNLGIVYLRGKREMEFA 64
BLAST of EMLSAG00000000243 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold474_size162001-processed-gene-0.15 (protein:Tk10279 transcript:snap_masked-scaffold474_size162001-processed-gene-0.15-mRNA-1 annotation:"mau2 chromatid cohesion factor homolog") HSP 1 Score: 53.1434 bits (126), Expect = 2.015e-10 Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 0 Query: 1 MNCMDVAENQFNTALRMSQDNELWTFADLSLAIVYV 36 MN MD AE Q N ALR SQ+ ELWTFA+L+LAIVY+ Sbjct: 400 MNQMDWAETQLNAALRTSQERELWTFANLNLAIVYL 435 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000243 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000000243 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 14
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BLAST of EMLSAG00000000243 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000000243 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 15
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BLAST of EMLSAG00000000243 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 9
BLAST of EMLSAG00000000243 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000243 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1036:152470..152790+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000243-683009 ID=EMLSAG00000000243-683009|Name=EMLSAG00000000243|organism=Lepeophtheirus salmonis|type=gene|length=321bp|location=Sequence derived from alignment at LSalAtl2s1036:152470..152790+ (Lepeophtheirus salmonis)back to top Add to Basket
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