EMLSAG00000000452, EMLSAG00000000452-683218 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000452 vs. GO
Match: - (symbol:ABLIM1 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0003779 "actin binding" evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007411 GO:GO:0007010 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944 TreeFam:TF318042 Gene3D:1.10.950.10 Gene3D:2.10.110.10 InterPro:IPR028448 PANTHER:PTHR24213:SF4 SUPFAM:SSF47050 GeneTree:ENSGT00710000106508 OrthoDB:EOG71CFKF OMA:HHPSEKP EMBL:DAAA02059267 EMBL:DAAA02059268 EMBL:DAAA02059269 Ensembl:ENSBTAT00000006447 Uniprot:F1MI97) HSP 1 Score: 46.595 bits (109), Expect = 2.201e-4 Identity = 21/54 (38.89%), Postives = 32/54 (59.26%), Query Frame = 0
Query: 245 TCCVCNQPIK-GDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
C C + IK G ++ + +K +H GC C CG+VL G Y+ + P CE+DY+
Sbjct: 149 NCAGCGRDIKNGQALLALEKQWHLGCFKCKSCGKVLTGEYISKDGAPYCEKDYQ 202
BLAST of EMLSAG00000000452 vs. GO
Match: - (symbol:ABLIM1 "Actin-binding LIM protein 1" species:9606 "Homo sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010 GO:GO:0008270 EMBL:AL133384 EMBL:AL354873 EMBL:AL590109 Ensembl:ENST00000277895 HGNC:HGNC:78 HOVERGEN:HBG031499 ChiTaRS:ABLIM1 Gene3D:1.10.950.10 Gene3D:2.10.110.10 SUPFAM:SSF47050 HOGENOM:HOG000285997 ProteinModelPortal:Q5T6N4 SMR:Q5T6N4 PRIDE:Q5T6N4 OMA:HHPSEKP NextBio:35539780 Uniprot:Q5T6N4) HSP 1 Score: 46.595 bits (109), Expect = 2.255e-4 Identity = 21/57 (36.84%), Postives = 32/57 (56.14%), Query Frame = 0
Query: 242 ITETCCVCNQPIK-GDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
+ C C + IK G ++ + K +H GC C CG+VL G Y+ + P CE+DY+
Sbjct: 222 FSSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGAPYCEKDYQ 278
BLAST of EMLSAG00000000452 vs. GO
Match: - (symbol:ABLIM1 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0003779 "actin binding" evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10 InterPro:IPR028448 PANTHER:PTHR24213:SF4 SUPFAM:SSF47050 GeneTree:ENSGT00710000106508 OrthoDB:EOG71CFKF EMBL:AAEX03015541 EMBL:AAEX03015542 Ensembl:ENSCAFT00000045219 Uniprot:J9P5B6) HSP 1 Score: 46.595 bits (109), Expect = 2.361e-4 Identity = 21/56 (37.50%), Postives = 33/56 (58.93%), Query Frame = 0
Query: 243 TETCCVCNQPIK-GDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
+ C C + IK G ++ + +K +H GC C CG+VL G Y+ + P CE+DY+
Sbjct: 147 SSNCAGCGRDIKNGQALLALEKQWHLGCFKCKSCGKVLTGEYISKDGAPYCEKDYQ 202
BLAST of EMLSAG00000000452 vs. GO
Match: - (symbol:ABLIM1 "Actin-binding LIM protein 1" species:9606 "Homo sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010 GO:GO:0008270 EMBL:AL133384 EMBL:AL354873 EMBL:AL590109 HGNC:HGNC:78 ChiTaRS:ABLIM1 Gene3D:1.10.950.10 Gene3D:2.10.110.10 InterPro:IPR028448 PANTHER:PTHR24213:SF4 SUPFAM:SSF47050 ProteinModelPortal:F8W8M4 SMR:F8W8M4 PRIDE:F8W8M4 Ensembl:ENST00000533213 NextBio:35512931 ArrayExpress:F8W8M4 Bgee:F8W8M4 Uniprot:F8W8M4) HSP 1 Score: 46.2098 bits (108), Expect = 2.519e-4 Identity = 21/57 (36.84%), Postives = 32/57 (56.14%), Query Frame = 0
Query: 242 ITETCCVCNQPIK-GDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
+ C C + IK G ++ + K +H GC C CG+VL G Y+ + P CE+DY+
Sbjct: 162 FSSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGAPYCEKDYQ 218
BLAST of EMLSAG00000000452 vs. GO
Match: - (symbol:ABLIM1 "Actin-binding LIM protein 1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0008270 EMBL:AL133384 EMBL:AL354873 EMBL:AL590109 HGNC:HGNC:78 HOVERGEN:HBG031499 ChiTaRS:ABLIM1 Gene3D:2.10.110.10 HOGENOM:HOG000285997 ProteinModelPortal:Q5T6N2 PRIDE:Q5T6N2 Ensembl:ENST00000369256 Uniprot:Q5T6N2) HSP 1 Score: 46.2098 bits (108), Expect = 2.534e-4 Identity = 21/57 (36.84%), Postives = 32/57 (56.14%), Query Frame = 0
Query: 242 ITETCCVCNQPIK-GDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
+ C C + IK G ++ + K +H GC C CG+VL G Y+ + P CE+DY+
Sbjct: 162 FSSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGAPYCEKDYQ 218
BLAST of EMLSAG00000000452 vs. GO
Match: - (symbol:ABLIM1 "Actin-binding LIM protein 1" species:9606 "Homo sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0007411 "axon guidance" evidence=TAS] [GO:0007601 "visual perception" evidence=TAS] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=TAS] [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0007411 GO:GO:0003779 GO:GO:0007010 GO:GO:0015629 GO:GO:0007601 GO:GO:0008270 EMBL:AF005654 EMBL:D31883 EMBL:AK098277 EMBL:CR749819 EMBL:AL133384 EMBL:AL354873 EMBL:AL590109 EMBL:BC002448 RefSeq:NP_001003407.1 RefSeq:NP_001003408.1 RefSeq:NP_002304.3 RefSeq:NP_006711.3 RefSeq:XP_005269885.1 RefSeq:XP_005269886.1 UniGene:Hs.438236 UniGene:Hs.538331 UniGene:Hs.593868 ProteinModelPortal:O14639 SMR:O14639 BioGrid:110171 IntAct:O14639 MINT:MINT-1447354 STRING:9606.ENSP00000338190 PhosphoSite:O14639 PaxDb:O14639 PRIDE:O14639 Ensembl:ENST00000277895 Ensembl:ENST00000369252 Ensembl:ENST00000369253 Ensembl:ENST00000392952 GeneID:3983 KEGG:hsa:3983 UCSC:uc021pyu.1 UCSC:uc021pyw.1 UCSC:uc021pyz.1 UCSC:uc021pzc.1 CTD:3983 GeneCards:GC10M116190 HGNC:HGNC:78 HPA:HPA038951 HPA:HPA038952 MIM:602330 neXtProt:NX_O14639 PharmGKB:PA35023 eggNOG:NOG302299 HOVERGEN:HBG031499 KO:K07520 TreeFam:TF318042 ChiTaRS:ABLIM1 GeneWiki:ABLIM1 GenomeRNAi:3983 NextBio:15616 PRO:PR:O14639 ArrayExpress:O14639 Bgee:O14639 CleanEx:HS_ABLIM1 Genevestigator:O14639 GO:GO:0009887 Gene3D:1.10.950.10 Gene3D:2.10.110.10 InterPro:IPR028448 PANTHER:PTHR24213:SF4 SUPFAM:SSF47050 Uniprot:O14639) HSP 1 Score: 46.2098 bits (108), Expect = 2.662e-4 Identity = 21/57 (36.84%), Postives = 32/57 (56.14%), Query Frame = 0
Query: 242 ITETCCVCNQPIK-GDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
+ C C + IK G ++ + K +H GC C CG+VL G Y+ + P CE+DY+
Sbjct: 222 FSSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGAPYCEKDYQ 278
BLAST of EMLSAG00000000452 vs. GO
Match: - (symbol:ABLIM1 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0003779 "actin binding" evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010 GO:GO:0008270 TreeFam:TF318042 Gene3D:1.10.950.10 Gene3D:2.10.110.10 SUPFAM:SSF47050 GeneTree:ENSGT00710000106508 OrthoDB:EOG71CFKF EMBL:AADN03005166 Ensembl:ENSGALT00000014731 PRO:PR:E1BS96 Uniprot:E1BS96) HSP 1 Score: 46.2098 bits (108), Expect = 2.748e-4 Identity = 21/56 (37.50%), Postives = 32/56 (57.14%), Query Frame = 0
Query: 243 TETCCVCNQPIK-GDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
+ C C + IK G ++ + K +H GC C CG+VL G Y+ + P CE+DY+
Sbjct: 157 SSNCAGCGRDIKNGQALLALDKQWHLGCFKCKACGKVLTGEYISKDGAPYCEKDYQ 212
BLAST of EMLSAG00000000452 vs. GO
Match: - (symbol:Tgfb1i1 "transforming growth factor beta 1 induced transcript 1" species:10090 "Mus musculus" [GO:0003713 "transcription coactivator activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005925 "focal adhesion" evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009408 "response to heat" evidence=ISO] [GO:0010718 "positive regulation of epithelial to mesenchymal transition" evidence=ISO] [GO:0016055 "Wnt signaling pathway" evidence=IEA] [GO:0016331 "morphogenesis of embryonic epithelium" evidence=IMP] [GO:0030054 "cell junction" evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA] [GO:0030511 "positive regulation of transforming growth factor beta receptor signaling pathway" evidence=ISO] [GO:0030512 "negative regulation of transforming growth factor beta receptor signaling pathway" evidence=ISO] [GO:0030579 "ubiquitin-dependent SMAD protein catabolic process" evidence=ISO] [GO:0030855 "epithelial cell differentiation" evidence=IGI] [GO:0031012 "extracellular matrix" evidence=ISO] [GO:0045165 "cell fate commitment" evidence=IGI] [GO:0045599 "negative regulation of fat cell differentiation" evidence=IGI] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0048495 "Roundabout binding" evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO] [GO:0070411 "I-SMAD binding" evidence=ISO] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 MGI:MGI:102784 GO:GO:0005737 GO:GO:0045893 GO:GO:0016055 GO:GO:0005856 GO:GO:0008270 GO:GO:0005925 GO:GO:0009408 Gene3D:2.10.110.10 GO:GO:0003713 GO:GO:0030855 GO:GO:0010718 GO:GO:0030511 GO:GO:0045599 GO:GO:0031012 GO:GO:0016363 GO:GO:0016331 GO:GO:0045165 GO:GO:0030512 GO:GO:0030579 TreeFam:TF314113 GeneTree:ENSGT00740000114891 eggNOG:NOG267887 HOVERGEN:HBG001512 InterPro:IPR017305 PIRSF:PIRSF037881 OrthoDB:EOG70ZZQN CTD:7041 OMA:TAGEQKE EMBL:L22482 EMBL:AF083064 EMBL:DQ143891 EMBL:DQ143892 EMBL:DQ143893 EMBL:DQ143894 EMBL:DQ143895 EMBL:DQ143896 EMBL:DQ143897 EMBL:DQ143898 EMBL:DQ143899 EMBL:DQ143900 EMBL:AK156423 EMBL:AK158409 EMBL:BC002049 EMBL:BC056362 PIR:A55071 RefSeq:XP_006507630.1 UniGene:Mm.3248 ProteinModelPortal:Q62219 SMR:Q62219 BioGrid:204158 IntAct:Q62219 MINT:MINT-1666684 PhosphoSite:Q62219 PaxDb:Q62219 PRIDE:Q62219 Ensembl:ENSMUST00000070656 Ensembl:ENSMUST00000163609 Ensembl:ENSMUST00000164710 Ensembl:ENSMUST00000167965 Ensembl:ENSMUST00000169919 GeneID:21804 KEGG:mmu:21804 UCSC:uc009jyl.1 UCSC:uc009jyo.1 InParanoid:Q62219 NextBio:301180 PRO:PR:Q62219 ArrayExpress:Q62219 Bgee:Q62219 Genevestigator:Q62219 Uniprot:Q62219) HSP 1 Score: 45.8246 bits (107), Expect = 2.827e-4 Identity = 62/241 (25.73%), Postives = 85/241 (35.27%), Query Frame = 0
Query: 102 DEEDDESWRKSTSPRPPVAITTSTALRVKPGGGGAAPSRARSKSPIV-LHRPNTQRSRFLXPGHTPRASP----RASPMRNAAPSRQVTMSKLATSGKDLKASLDPEI---QAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGK------------------------------------KITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEE--KPICERDY 296
+E++D+S KS+ PP APS+ + S L R S F H P + P ASP R PS G+ K SLD + Q+ + V T K G CG CNK + + TA G+ + + C CNQPI+ V + +HP C CGE G F+E +P C RD+
Sbjct: 124 EEKEDQSEDKSSPTVPPSPF--------------PAPSKPSATSATQELDRLMASLSDFRVQNHLPASGPPQPPAASPTREGCPS---------PPGQTSKGSLDTMLGLLQSDLSRRGVPTQAK--GLCGSCNKPIAGQVVTALGRAWHPEHFLCSGCSTTLGGSSFFEKDGAPFCPECYFERFSPRCGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEPF-GEEGFHEREGRPYCRRDF 338
BLAST of EMLSAG00000000452 vs. GO
Match: - (symbol:Ablim1 "actin-binding LIM protein 1" species:10090 "Mus musculus" [GO:0003779 "actin binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0007411 "axon guidance" evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153 MGI:MGI:1194500 GO:GO:0005737 GO:GO:0007411 GO:GO:0003779 GO:GO:0007010 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944 CTD:3983 eggNOG:NOG302299 HOVERGEN:HBG031499 KO:K07520 Gene3D:1.10.950.10 Gene3D:2.10.110.10 InterPro:IPR028448 PANTHER:PTHR24213:SF4 SUPFAM:SSF47050 EMBL:AF404774 EMBL:AF404775 EMBL:AF404776 EMBL:AK122196 EMBL:AK029371 RefSeq:NP_001096647.1 RefSeq:NP_001096648.1 RefSeq:NP_848803.3 RefSeq:XP_006527108.1 UniGene:Mm.217161 UniGene:Mm.446592 ProteinModelPortal:Q8K4G5 SMR:Q8K4G5 IntAct:Q8K4G5 MINT:MINT-4086493 PhosphoSite:Q8K4G5 PaxDb:Q8K4G5 PRIDE:Q8K4G5 Ensembl:ENSMUST00000099294 Ensembl:ENSMUST00000111524 Ensembl:ENSMUST00000111546 GeneID:226251 KEGG:mmu:226251 UCSC:uc008hzs.2 UCSC:uc008hzt.2 UCSC:uc008hzz.1 GeneTree:ENSGT00710000106508 HOGENOM:HOG000285997 InParanoid:Q8K4G5 NextBio:378072 PRO:PR:Q8K4G5 ArrayExpress:Q8K4G5 Bgee:Q8K4G5 CleanEx:MM_ABLIM1 Genevestigator:Q8K4G5 Uniprot:Q8K4G5) HSP 1 Score: 46.2098 bits (108), Expect = 2.896e-4 Identity = 21/56 (37.50%), Postives = 32/56 (57.14%), Query Frame = 0
Query: 243 TETCCVCNQPIK-GDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
+ C C + IK G ++ + K +H GC C CG+VL G Y+ + P CE+DY+
Sbjct: 223 SSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGSPYCEKDYQ 278
BLAST of EMLSAG00000000452 vs. GO
Match: - (symbol:ABLIM1 "Actin-binding LIM protein 1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0008270 EMBL:AL133384 EMBL:AL354873 EMBL:AL590109 HGNC:HGNC:78 ChiTaRS:ABLIM1 Gene3D:2.10.110.10 OrthoDB:EOG71CFKF PRIDE:H0Y3K7 Ensembl:ENST00000392955 NextBio:35519305 Bgee:H0Y3K7 Uniprot:H0Y3K7) HSP 1 Score: 46.2098 bits (108), Expect = 2.902e-4 Identity = 21/57 (36.84%), Postives = 32/57 (56.14%), Query Frame = 0
Query: 242 ITETCCVCNQPIK-GDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
+ C C + IK G ++ + K +H GC C CG+VL G Y+ + P CE+DY+
Sbjct: 162 FSSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGAPYCEKDYQ 218
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592935349|gb|GAXK01023204.1| (TSA: Calanus finmarchicus comp115838_c0_seq2 transcribed RNA sequence) HSP 1 Score: 109.768 bits (273), Expect = 2.894e-25 Identity = 67/178 (37.64%), Postives = 85/178 (47.75%), Query Frame = 0
Query: 169 SPRASPMRN---------------AAPSRQVTMSKLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKI----------------------------------TETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
SPRASP R A P++ + LA+ KDL DP++ A+IGN AVKTV K +C C + +T +GCTAFGK E CCVC + I GD V +N YHPGCM C +C E LR SY F++ KPICE+D+K
Sbjct: 588 SPRASPARKISARGMSPNKSMRSPATPTKSLPGDALAS--KDLN---DPDVLARIGNRAVKTVSKPTRSCDHCKRDLTDDGCTAFGKVYHKDCFRCHGCKKKLDGKFFSKDDNAYCAKCHKANQEQCCVCKEKIVGDCVVNNNTYYHPGCMKCHVCEEPLRNSYFFFQNKPICEKDFK 1106 HSP 2 Score: 31.9574 bits (71), Expect = 3.263e+0 Identity = 23/95 (24.21%), Postives = 38/95 (40.00%), Query Frame = 0
Query: 214 KTVQKSIGTCGICNKVVTLEG----------CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKP--ICERDY 296
K +++ C +C +V+ EG C + C C++ I+G + V+HP C TC C + G ++K C DY
Sbjct: 1095 KDFKETQQICSVCEEVI--EGTYYQLNDQVFCEKDYMAHMDKCGKCDKEIEGKVIRITGSVFHPDCFTCETCNTSMVGQTFSTDDKNKIYCPDDY 1373 HSP 3 Score: 30.8018 bits (68), Expect = 7.192e+0 Identity = 20/57 (35.09%), Postives = 32/57 (56.14%), Query Frame = 0
Query: 41 KXSRSVTPMGSPAL-HVRGGTPIYDSEAEFGFEKNRLIGELTSRMKKHAKGSYKNRR 96
+ SR+ + GSP + R +P + F EK+ +GEL +RM++ + YKNRR
Sbjct: 144 RMSRTNSAPGSPIIGSARTNSPRMNRS--FRGEKDIGVGELANRMRRMQQDGYKNRR 308
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592935350|gb|GAXK01023203.1| (TSA: Calanus finmarchicus comp115838_c0_seq1 transcribed RNA sequence) HSP 1 Score: 109.768 bits (273), Expect = 2.981e-25 Identity = 67/178 (37.64%), Postives = 85/178 (47.75%), Query Frame = 0
Query: 169 SPRASPMRN---------------AAPSRQVTMSKLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKI----------------------------------TETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
SPRASP R A P++ + LA+ KDL DP++ A+IGN AVKTV K +C C + +T +GCTAFGK E CCVC + I GD V +N YHPGCM C +C E LR SY F++ KPICE+D+K
Sbjct: 937 SPRASPARKISARGMSPNKSMRSPATPTKSLPGDALAS--KDLN---DPDVLARIGNRAVKTVSKPTRSCDHCKRDLTDDGCTAFGKVYHKDCFRCHGCKKKLDGKFFSKDDNAYCAKCHKANQEQCCVCKEKIVGDCVVNNNTYYHPGCMKCHVCEEPLRNSYFFFQNKPICEKDFK 1455 HSP 2 Score: 31.9574 bits (71), Expect = 3.041e+0 Identity = 23/95 (24.21%), Postives = 38/95 (40.00%), Query Frame = 0
Query: 214 KTVQKSIGTCGICNKVVTLEG----------CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKP--ICERDY 296
K +++ C +C +V+ EG C + C C++ I+G + V+HP C TC C + G ++K C DY
Sbjct: 1444 KDFKETQQICSVCEEVI--EGTYYQLNDQVFCEKDYMAHMDKCGKCDKEIEGKVIRITGSVFHPDCFTCETCNTSMVGQTFSTDDKNKIYCPDDY 1722 HSP 3 Score: 30.8018 bits (68), Expect = 6.877e+0 Identity = 20/57 (35.09%), Postives = 32/57 (56.14%), Query Frame = 0
Query: 41 KXSRSVTPMGSPAL-HVRGGTPIYDSEAEFGFEKNRLIGELTSRMKKHAKGSYKNRR 96
+ SR+ + GSP + R +P + F EK+ +GEL +RM++ + YKNRR
Sbjct: 493 RMSRTNSAPGSPIIGSARTNSPRMNRS--FRGEKDIGVGELANRMRRMQQDGYKNRR 657
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592935348|gb|GAXK01023205.1| (TSA: Calanus finmarchicus comp115838_c0_seq3 transcribed RNA sequence) HSP 1 Score: 109.768 bits (273), Expect = 3.098e-25 Identity = 67/178 (37.64%), Postives = 85/178 (47.75%), Query Frame = 0
Query: 169 SPRASPMRN---------------AAPSRQVTMSKLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKI----------------------------------TETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
SPRASP R A P++ + LA+ KDL DP++ A+IGN AVKTV K +C C + +T +GCTAFGK E CCVC + I GD V +N YHPGCM C +C E LR SY F++ KPICE+D+K
Sbjct: 517 SPRASPARKISARGMSPNKSMRSPATPTKSLPGDALAS--KDLN---DPDVLARIGNRAVKTVSKPTRSCDHCKRDLTDDGCTAFGKVYHKDCFRCHGCKKKLDGKFFSKDDNAYCAKCHKANQEQCCVCKEKIVGDCVVNNNTYYHPGCMKCHVCEEPLRNSYFFFQNKPICEKDFK 1035 HSP 2 Score: 31.9574 bits (71), Expect = 3.711e+0 Identity = 23/95 (24.21%), Postives = 38/95 (40.00%), Query Frame = 0
Query: 214 KTVQKSIGTCGICNKVVTLEG----------CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKP--ICERDY 296
K +++ C +C +V+ EG C + C C++ I+G + V+HP C TC C + G ++K C DY
Sbjct: 1024 KDFKETQQICSVCEEVI--EGTYYQLNDQVFCEKDYMAHMDKCGKCDKEIEGKVIRITGSVFHPDCFTCETCNTSMVGQTFSTDDKNKIYCPDDY 1302 HSP 3 Score: 31.187 bits (69), Expect = 6.303e+0 Identity = 20/57 (35.09%), Postives = 32/57 (56.14%), Query Frame = 0
Query: 41 KXSRSVTPMGSPAL-HVRGGTPIYDSEAEFGFEKNRLIGELTSRMKKHAKGSYKNRR 96
+ SR+ + GSP + R +P + F EK+ +GEL +RM++ + YKNRR
Sbjct: 73 RMSRTNSAPGSPIIGSARTNSPRMNRS--FRGEKDIGVGELANRMRRMQQDGYKNRR 237
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592808255|gb|GAXK01146313.1| (TSA: Calanus finmarchicus comp1270819_c0_seq1 transcribed RNA sequence) HSP 1 Score: 79.7221 bits (195), Expect = 8.289e-16 Identity = 48/154 (31.17%), Postives = 72/154 (46.75%), Query Frame = 0
Query: 181 SRQVTMSKLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFG----------------------------------KKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKHGG 300
++Q T S+ S ++K L + AKIGN +K V + C C+K +T +G A G K+ E C VC + I D + NKK YHP CM C++CG+ LR YL ++++P+CE+D+K G
Sbjct: 695 TKQKTTSR--QSSNNVKQRLSKDTLAKIGNRQIKVVNQEKKKCSSCSKPLTEDGFFALGQLYHKTCFRCKYCTVKLSQIFFVRDDQPCCAKCHKEKQEDCWVCKKKISDDHILCNKKFYHPRCMKCYVCGDQLRDRYLTFKDQPVCEKDFKAIG 1150
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592805838|gb|GAXK01148730.1| (TSA: Calanus finmarchicus comp742429_c0_seq1 transcribed RNA sequence) HSP 1 Score: 73.9442 bits (180), Expect = 5.606e-14 Identity = 42/131 (32.06%), Postives = 57/131 (43.51%), Query Frame = 0
Query: 201 DPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEG----------------------------------CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
D +I +KIGN K V +S CG C+K +T G C A +++ E C VC I D V K YHPGCM C++C E L Y +E++P+CE+D K
Sbjct: 411 DEDILSKIGNRQTKVVNQSKEKCGACSKPLTEAGFLAGGKLYHAACFRCKYCSSNLGQTYFVRENHPCCEACHREMAEDCWVCKTKILEDLVECKDKFYHPGCMKCYVCEEQLTDKYFTFEDRPVCEKDLK 803
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592808559|gb|GAXK01146009.1| (TSA: Calanus finmarchicus comp582603_c0_seq2 transcribed RNA sequence) HSP 1 Score: 65.855 bits (159), Expect = 7.000e-12 Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 0
Query: 235 CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKH 298
C K + C +C++ I D + + KV+HP CM C +C E LRG YL Y++ PICE+D+++
Sbjct: 33 CAVCYKDAAKECALCSEKISEDHILCDNKVFHPRCMKCQVCNEQLRGKYLIYKDWPICEKDFRN 224
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592808560|gb|GAXK01146008.1| (TSA: Calanus finmarchicus comp582603_c0_seq1 transcribed RNA sequence) HSP 1 Score: 60.4622 bits (145), Expect = 6.564e-10 Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 0
Query: 235 CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGS-YLFYEEKPICERDYKHGG 300
C A K + C C + I D ++ N V+HP CM C +CGE +RG Y Y+++PICE+D++ G
Sbjct: 57 CAACYKDAKQGCAECGEKISEDHISCNNLVFHPRCMKCQVCGEQVRGEKYFTYKDRPICEKDFRGVG 257
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592904405|gb|GAXK01053970.1| (TSA: Calanus finmarchicus comp264450_c2_seq3 transcribed RNA sequence) HSP 1 Score: 62.003 bits (149), Expect = 6.890e-10 Identity = 36/104 (34.62%), Postives = 53/104 (50.96%), Query Frame = 0
Query: 203 EIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKITE--------TCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKH 298
E+Q+ +T K C C K++ + TA + + E TC VC++ I GD + S K +H CM C +CGEVL G+Y +K ICE+DY+
Sbjct: 641 EVQSGGCTANGRTFHKECFKCSNCKKMLEEKFFTAEDQPLCENCYKVDDKTCDVCSKAIAGDCLMSKGKHFHQDCMKCSVCGEVLSGTYFTAMDKLICEKDYRE 952 HSP 2 Score: 38.1206 bits (87), Expect = 2.929e-2 Identity = 31/118 (26.27%), Postives = 48/118 (40.68%), Query Frame = 0
Query: 188 KLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCG--ICNKVVTLEG----CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPI--CERDYK 297
K + G+ L + + I + +KS CG I TL+ C KK+ C C + ++G + + YHP C TC +C E L G ++ + C DYK
Sbjct: 371 KCSVCGEVLSGTYFTAMDKLICEKDYRETEKSCSDCGCVISGPYYTLDNEKVVCEKDYKKMLGNCERCGKVVEGKILKVSGGFYHPDCFTCVVCKESLVGVPFSLDDDKLVYCSEDYK 724
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592904407|gb|GAXK01053968.1| (TSA: Calanus finmarchicus comp264450_c2_seq1 transcribed RNA sequence) HSP 1 Score: 62.003 bits (149), Expect = 6.967e-10 Identity = 36/104 (34.62%), Postives = 53/104 (50.96%), Query Frame = 0
Query: 203 EIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKITE--------TCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKH 298
E+Q+ +T K C C K++ + TA + + E TC VC++ I GD + S K +H CM C +CGEVL G+Y +K ICE+DY+
Sbjct: 677 EVQSGGCTANGRTFHKECFKCSNCKKMLEEKFFTAEDQPLCENCYKVDDKTCDVCSKAIAGDCLMSKGKHFHQDCMKCSVCGEVLSGTYFTAMDKLICEKDYRE 988 HSP 2 Score: 38.1206 bits (87), Expect = 2.947e-2 Identity = 31/118 (26.27%), Postives = 48/118 (40.68%), Query Frame = 0
Query: 188 KLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCG--ICNKVVTLEG----CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPI--CERDYK 297
K + G+ L + + I + +KS CG I TL+ C KK+ C C + ++G + + YHP C TC +C E L G ++ + C DYK
Sbjct: 407 KCSVCGEVLSGTYFTAMDKLICEKDYRETEKSCSDCGCVISGPYYTLDNEKVVCEKDYKKMLGNCERCGKVVEGKILKVSGGFYHPDCFTCVVCKESLVGVPFSLDDDKLVYCSEDYK 760
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592904404|gb|GAXK01053971.1| (TSA: Calanus finmarchicus comp264450_c2_seq4 transcribed RNA sequence) HSP 1 Score: 62.003 bits (149), Expect = 6.984e-10 Identity = 36/104 (34.62%), Postives = 53/104 (50.96%), Query Frame = 0
Query: 203 EIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKITE--------TCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKH 298
E+Q+ +T K C C K++ + TA + + E TC VC++ I GD + S K +H CM C +CGEVL G+Y +K ICE+DY+
Sbjct: 641 EVQSGGCTANGRTFHKECFKCSNCKKMLEEKFFTAEDQPLCENCYKVDDKTCDVCSKAIAGDCLMSKGKHFHQDCMKCSVCGEVLSGTYFTAMDKLICEKDYRE 952 HSP 2 Score: 38.5058 bits (88), Expect = 2.651e-2 Identity = 31/118 (26.27%), Postives = 48/118 (40.68%), Query Frame = 0
Query: 188 KLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCG--ICNKVVTLEG----CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPI--CERDYK 297
K + G+ L + + I + +KS CG I TL+ C KK+ C C + ++G + + YHP C TC +C E L G ++ + C DYK
Sbjct: 371 KCSVCGEVLSGTYFTAMDKLICEKDYRETEKSCSDCGCVISGPYYTLDNEKVVCEKDYKKMLGNCERCGKVVEGKILKVSGGFYHPDCFTCVVCKESLVGVPFSLDDDKLVYCSEDYK 724
BLAST of EMLSAG00000000452 vs. L. salmonis peptides
Match: EMLSAP00000000452 (pep:novel supercontig:LSalAtl2s:LSalAtl2s106:286299:421108:1 gene:EMLSAG00000000452 transcript:EMLSAT00000000452 description:"maker-LSalAtl2s106-snap-gene-4.16") HSP 1 Score: 617.076 bits (1590), Expect = 0.000e+0 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
Query: 1 MASSPLVTELKMTPTRDIRLSPMNSPKINRSRFAXPSDXPKXSRSVTPMGSPALHVRGGTPIYDSEAEFGFEKNRLIGELTSRMKKHAKGSYKNRRDDGSSDEEDDESWRKSTSPRPPVAITTSTALRVKPGGGGAAPSRARSKSPIVLHRPNTQRSRFLXPGHTPRASPRASPMRNAAPSRQVTMSKLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKHGGDSIGGS 306
MASSPLVTELKMTPTRDIRLSPMNSPKINRSRFAXPSDXPKXSRSVTPMGSPALHVRGGTPIYDSEAEFGFEKNRLIGELTSRMKKHAKGSYKNRRDDGSSDEEDDESWRKSTSPRPPVAITTSTALRVKPGGGGAAPSRARSKSPIVLHRPNTQRSRFLXPGHTPRASPRASPMRNAAPSRQVTMSKLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKHGGDSIGGS
Sbjct: 1 MASSPLVTELKMTPTRDIRLSPMNSPKINRSRFAXPSDXPKXSRSVTPMGSPALHVRGGTPIYDSEAEFGFEKNRLIGELTSRMKKHAKGSYKNRRDDGSSDEEDDESWRKSTSPRPPVAITTSTALRVKPGGGGAAPSRARSKSPIVLHRPNTQRSRFLXPGHTPRASPRASPMRNAAPSRQVTMSKLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKHGGDSIGGS 306
BLAST of EMLSAG00000000452 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold200_size264178-snap-gene-1.16 (protein:Tk07736 transcript:maker-scaffold200_size264178-snap-gene-1.16-mRNA-1 annotation:"lipoma-preferred partner homolog isoform x4") HSP 1 Score: 132.88 bits (333), Expect = 4.930e-35 Identity = 63/131 (48.09%), Postives = 78/131 (59.54%), Query Frame = 0
Query: 201 DPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGK----------------------------------KITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
DPEIQAK+GN A K VQKS+G CG+C K + +GCTAFGK ++ E+C VCN PIKGDSV SN K +HP CM CF+CG+ LRG +L +++KPICERDYK
Sbjct: 363 DPEIQAKLGNRATKVVQKSLGACGVCGKGINEDGCTAFGKFYHKNCFKCTVCRQKITGKFFEKAGKPYCAKDFQQLQESCTVCNLPIKGDSVVSNDKPFHPECMKCFICGDSLRGQFLTFQDKPICERDYK 493
BLAST of EMLSAG00000000452 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold719_size106944-processed-gene-0.10 (protein:Tk04737 transcript:snap_masked-scaffold719_size106944-processed-gene-0.10-mRNA-1 annotation:"hypothetical protein YQE_01647 partial") HSP 1 Score: 53.5286 bits (127), Expect = 3.231e-8 Identity = 32/109 (29.36%), Postives = 52/109 (47.71%), Query Frame = 0
Query: 192 SGKDLKASLDPEIQAKIGNXAVKTVQ--KSIGTCGICNKVVTLEGCTAFGKKITETCCVCNQPIK-GDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
+GKDL +L+ ++ I + V S+ + G N T T G + +TC C + ++ G ++ + K YH C C C +L G Y+ + P CERDY+
Sbjct: 196 AGKDLDNALE-DLSNSIADIKTTKVAAPSSLNSSGTTNGRATKTATTTSGGRGDDTCAGCREELRDGQALMALDKQYHVWCFKCQACNALLHGEYMGKDGHPYCERDYQ 303 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000452 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000000452 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000000452 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000452 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000452 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000452 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000452 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s106:286299..421108+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000452-683218 ID=EMLSAG00000000452-683218|Name=EMLSAG00000000452|organism=Lepeophtheirus salmonis|type=gene|length=134810bp|location=Sequence derived from alignment at LSalAtl2s106:286299..421108+ (Lepeophtheirus salmonis)back to top Add to Basket
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