EMLSAG00000000452, EMLSAG00000000452-683218 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000452 vs. GO
Match: - (symbol:ABLIM1 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0003779 "actin binding" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0008270 Gene3D:2.10.110.10 GeneTree:ENSGT00710000106508 EMBL:AADN03005166 Ensembl:ENSGALT00000044578 Uniprot:R4GFU2) HSP 1 Score: 45.8246 bits (107), Expect = 3.504e-4 Identity = 21/56 (37.50%), Postives = 32/56 (57.14%), Query Frame = 0
Query: 243 TETCCVCNQPIK-GDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
+ C C + IK G ++ + K +H GC C CG+VL G Y+ + P CE+DY+
Sbjct: 157 SSNCAGCGRDIKNGQALLALDKQWHLGCFKCKACGKVLTGEYISKDGAPYCEKDYQ 212
BLAST of EMLSAG00000000452 vs. GO
Match: - (symbol:ablim1b "actin binding LIM protein 1b" species:7955 "Danio rerio" [GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153 ZFIN:ZDB-GENE-050327-91 GO:GO:0007010 GO:GO:0008270 TreeFam:TF318042 Gene3D:1.10.950.10 Gene3D:2.10.110.10 SUPFAM:SSF47050 GeneTree:ENSGT00710000106508 OrthoDB:EOG71CFKF EMBL:CU464184 EMBL:BX465198 EMBL:CU915376 Ensembl:ENSDART00000126354 Bgee:F1QT49 Uniprot:F1QT49) HSP 1 Score: 45.8246 bits (107), Expect = 3.829e-4 Identity = 23/74 (31.08%), Postives = 37/74 (50.00%), Query Frame = 0
Query: 225 ICNKVVTLEGCTAFGKKITETCCVCNQPIK-GDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
+C + V T+ + C C + IK G ++ + +H GC C CG+VL G Y+ + P CE+DY+
Sbjct: 125 LCQRCVQPTSPTSKDISASSNCAGCGRDIKNGQALLALDSQWHLGCFKCKACGKVLSGEYISKDGSPYCEKDYQ 198
BLAST of EMLSAG00000000452 vs. GO
Match: - (symbol:ZYX "Uncharacterized protein" species:9913 "Bos taurus" [GO:0001725 "stress fiber" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005913 "cell-cell adherens junction" evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS50023 SMART:SM00132 GO:GO:0005737 GO:GO:0008270 GO:GO:0005925 GO:GO:0005913 Gene3D:2.10.110.10 GeneTree:ENSGT00710000106508 GO:GO:0001725 TreeFam:TF320310 eggNOG:NOG279196 HOGENOM:HOG000220910 HOVERGEN:HBG093602 OrthoDB:EOG7992Q6 CTD:7791 KO:K06273 OMA:CYAGTLE EMBL:DAAA02011805 EMBL:BC123619 RefSeq:NP_001071569.1 UniGene:Bt.65076 SMR:Q08DQ6 STRING:9913.ENSBTAP00000023912 Ensembl:ENSBTAT00000023912 GeneID:768226 KEGG:bta:768226 InParanoid:Q08DQ6 NextBio:20918524 Uniprot:Q08DQ6) HSP 1 Score: 45.8246 bits (107), Expect = 3.994e-4 Identity = 24/71 (33.80%), Postives = 32/71 (45.07%), Query Frame = 0
Query: 231 TLEG---CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEE--KPICERDY 296
+LEG C E C C QPI + + K YHP C TC +C L G+ ++ +P C DY
Sbjct: 415 SLEGAPYCEGCYTDTLEKCSTCGQPITDRMLRATGKAYHPQCFTCVVCACPLEGTSFIVDQANRPHCVPDY 485
BLAST of EMLSAG00000000452 vs. GO
Match: - (symbol:ZYX "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0001725 "stress fiber" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005913 "cell-cell adherens junction" evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005737 GO:GO:0008270 GO:GO:0005925 GO:GO:0005913 Gene3D:2.10.110.10 GeneTree:ENSGT00710000106508 GO:GO:0001725 TreeFam:TF320310 OrthoDB:EOG7992Q6 OMA:APQKKFG EMBL:AAEX03010185 EMBL:AAEX03010186 EMBL:AAEX03010187 Ensembl:ENSCAFT00000005812 Uniprot:F1P7F8) HSP 1 Score: 45.4394 bits (106), Expect = 5.265e-4 Identity = 24/73 (32.88%), Postives = 32/73 (43.84%), Query Frame = 0
Query: 229 VVTLEG---CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEE--KPICERDY 296
+LEG C E C C QPI + + K YHP C TC +C L G+ ++ +P C DY
Sbjct: 417 FYSLEGAPYCEGCYTDTLEKCNTCGQPITDRMLRATGKAYHPQCFTCVVCACPLEGTSFIVDQANRPHCVPDY 489
BLAST of EMLSAG00000000452 vs. GO
Match: - (symbol:ZYX "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0008270 Gene3D:2.10.110.10 GeneTree:ENSGT00710000106508 TreeFam:TF320310 OrthoDB:EOG7992Q6 CTD:7791 KO:K06273 OMA:APQKKFG EMBL:CU928380 EMBL:CU929961 RefSeq:XP_003134640.2 RefSeq:XP_005657776.1 Ensembl:ENSSSCT00000017924 GeneID:100524720 KEGG:ssc:100524720 ArrayExpress:F1SRV9 Uniprot:F1SRV9) HSP 1 Score: 45.0542 bits (105), Expect = 5.668e-4 Identity = 24/71 (33.80%), Postives = 32/71 (45.07%), Query Frame = 0
Query: 231 TLEG---CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEE--KPICERDY 296
+LEG C E C C QPI + + K YHP C TC +C L G+ ++ +P C DY
Sbjct: 422 SLEGAPYCEGCYTDTLEKCNTCGQPITDRMLRATGKAYHPQCFTCVVCACPLEGTSFIVDQANRPHCVPDY 492
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592935349|gb|GAXK01023204.1| (TSA: Calanus finmarchicus comp115838_c0_seq2 transcribed RNA sequence) HSP 1 Score: 109.768 bits (273), Expect = 2.894e-25 Identity = 67/178 (37.64%), Postives = 85/178 (47.75%), Query Frame = 0
Query: 169 SPRASPMRN---------------AAPSRQVTMSKLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKI----------------------------------TETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
SPRASP R A P++ + LA+ KDL DP++ A+IGN AVKTV K +C C + +T +GCTAFGK E CCVC + I GD V +N YHPGCM C +C E LR SY F++ KPICE+D+K
Sbjct: 588 SPRASPARKISARGMSPNKSMRSPATPTKSLPGDALAS--KDLN---DPDVLARIGNRAVKTVSKPTRSCDHCKRDLTDDGCTAFGKVYHKDCFRCHGCKKKLDGKFFSKDDNAYCAKCHKANQEQCCVCKEKIVGDCVVNNNTYYHPGCMKCHVCEEPLRNSYFFFQNKPICEKDFK 1106 HSP 2 Score: 31.9574 bits (71), Expect = 3.263e+0 Identity = 23/95 (24.21%), Postives = 38/95 (40.00%), Query Frame = 0
Query: 214 KTVQKSIGTCGICNKVVTLEG----------CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKP--ICERDY 296
K +++ C +C +V+ EG C + C C++ I+G + V+HP C TC C + G ++K C DY
Sbjct: 1095 KDFKETQQICSVCEEVI--EGTYYQLNDQVFCEKDYMAHMDKCGKCDKEIEGKVIRITGSVFHPDCFTCETCNTSMVGQTFSTDDKNKIYCPDDY 1373 HSP 3 Score: 30.8018 bits (68), Expect = 7.192e+0 Identity = 20/57 (35.09%), Postives = 32/57 (56.14%), Query Frame = 0
Query: 41 KXSRSVTPMGSPAL-HVRGGTPIYDSEAEFGFEKNRLIGELTSRMKKHAKGSYKNRR 96
+ SR+ + GSP + R +P + F EK+ +GEL +RM++ + YKNRR
Sbjct: 144 RMSRTNSAPGSPIIGSARTNSPRMNRS--FRGEKDIGVGELANRMRRMQQDGYKNRR 308
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592935350|gb|GAXK01023203.1| (TSA: Calanus finmarchicus comp115838_c0_seq1 transcribed RNA sequence) HSP 1 Score: 109.768 bits (273), Expect = 2.981e-25 Identity = 67/178 (37.64%), Postives = 85/178 (47.75%), Query Frame = 0
Query: 169 SPRASPMRN---------------AAPSRQVTMSKLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKI----------------------------------TETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
SPRASP R A P++ + LA+ KDL DP++ A+IGN AVKTV K +C C + +T +GCTAFGK E CCVC + I GD V +N YHPGCM C +C E LR SY F++ KPICE+D+K
Sbjct: 937 SPRASPARKISARGMSPNKSMRSPATPTKSLPGDALAS--KDLN---DPDVLARIGNRAVKTVSKPTRSCDHCKRDLTDDGCTAFGKVYHKDCFRCHGCKKKLDGKFFSKDDNAYCAKCHKANQEQCCVCKEKIVGDCVVNNNTYYHPGCMKCHVCEEPLRNSYFFFQNKPICEKDFK 1455 HSP 2 Score: 31.9574 bits (71), Expect = 3.041e+0 Identity = 23/95 (24.21%), Postives = 38/95 (40.00%), Query Frame = 0
Query: 214 KTVQKSIGTCGICNKVVTLEG----------CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKP--ICERDY 296
K +++ C +C +V+ EG C + C C++ I+G + V+HP C TC C + G ++K C DY
Sbjct: 1444 KDFKETQQICSVCEEVI--EGTYYQLNDQVFCEKDYMAHMDKCGKCDKEIEGKVIRITGSVFHPDCFTCETCNTSMVGQTFSTDDKNKIYCPDDY 1722 HSP 3 Score: 30.8018 bits (68), Expect = 6.877e+0 Identity = 20/57 (35.09%), Postives = 32/57 (56.14%), Query Frame = 0
Query: 41 KXSRSVTPMGSPAL-HVRGGTPIYDSEAEFGFEKNRLIGELTSRMKKHAKGSYKNRR 96
+ SR+ + GSP + R +P + F EK+ +GEL +RM++ + YKNRR
Sbjct: 493 RMSRTNSAPGSPIIGSARTNSPRMNRS--FRGEKDIGVGELANRMRRMQQDGYKNRR 657
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592935348|gb|GAXK01023205.1| (TSA: Calanus finmarchicus comp115838_c0_seq3 transcribed RNA sequence) HSP 1 Score: 109.768 bits (273), Expect = 3.098e-25 Identity = 67/178 (37.64%), Postives = 85/178 (47.75%), Query Frame = 0
Query: 169 SPRASPMRN---------------AAPSRQVTMSKLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKI----------------------------------TETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
SPRASP R A P++ + LA+ KDL DP++ A+IGN AVKTV K +C C + +T +GCTAFGK E CCVC + I GD V +N YHPGCM C +C E LR SY F++ KPICE+D+K
Sbjct: 517 SPRASPARKISARGMSPNKSMRSPATPTKSLPGDALAS--KDLN---DPDVLARIGNRAVKTVSKPTRSCDHCKRDLTDDGCTAFGKVYHKDCFRCHGCKKKLDGKFFSKDDNAYCAKCHKANQEQCCVCKEKIVGDCVVNNNTYYHPGCMKCHVCEEPLRNSYFFFQNKPICEKDFK 1035 HSP 2 Score: 31.9574 bits (71), Expect = 3.711e+0 Identity = 23/95 (24.21%), Postives = 38/95 (40.00%), Query Frame = 0
Query: 214 KTVQKSIGTCGICNKVVTLEG----------CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKP--ICERDY 296
K +++ C +C +V+ EG C + C C++ I+G + V+HP C TC C + G ++K C DY
Sbjct: 1024 KDFKETQQICSVCEEVI--EGTYYQLNDQVFCEKDYMAHMDKCGKCDKEIEGKVIRITGSVFHPDCFTCETCNTSMVGQTFSTDDKNKIYCPDDY 1302 HSP 3 Score: 31.187 bits (69), Expect = 6.303e+0 Identity = 20/57 (35.09%), Postives = 32/57 (56.14%), Query Frame = 0
Query: 41 KXSRSVTPMGSPAL-HVRGGTPIYDSEAEFGFEKNRLIGELTSRMKKHAKGSYKNRR 96
+ SR+ + GSP + R +P + F EK+ +GEL +RM++ + YKNRR
Sbjct: 73 RMSRTNSAPGSPIIGSARTNSPRMNRS--FRGEKDIGVGELANRMRRMQQDGYKNRR 237
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592808255|gb|GAXK01146313.1| (TSA: Calanus finmarchicus comp1270819_c0_seq1 transcribed RNA sequence) HSP 1 Score: 79.7221 bits (195), Expect = 8.289e-16 Identity = 48/154 (31.17%), Postives = 72/154 (46.75%), Query Frame = 0
Query: 181 SRQVTMSKLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFG----------------------------------KKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKHGG 300
++Q T S+ S ++K L + AKIGN +K V + C C+K +T +G A G K+ E C VC + I D + NKK YHP CM C++CG+ LR YL ++++P+CE+D+K G
Sbjct: 695 TKQKTTSR--QSSNNVKQRLSKDTLAKIGNRQIKVVNQEKKKCSSCSKPLTEDGFFALGQLYHKTCFRCKYCTVKLSQIFFVRDDQPCCAKCHKEKQEDCWVCKKKISDDHILCNKKFYHPRCMKCYVCGDQLRDRYLTFKDQPVCEKDFKAIG 1150
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592805838|gb|GAXK01148730.1| (TSA: Calanus finmarchicus comp742429_c0_seq1 transcribed RNA sequence) HSP 1 Score: 73.9442 bits (180), Expect = 5.606e-14 Identity = 42/131 (32.06%), Postives = 57/131 (43.51%), Query Frame = 0
Query: 201 DPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEG----------------------------------CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
D +I +KIGN K V +S CG C+K +T G C A +++ E C VC I D V K YHPGCM C++C E L Y +E++P+CE+D K
Sbjct: 411 DEDILSKIGNRQTKVVNQSKEKCGACSKPLTEAGFLAGGKLYHAACFRCKYCSSNLGQTYFVRENHPCCEACHREMAEDCWVCKTKILEDLVECKDKFYHPGCMKCYVCEEQLTDKYFTFEDRPVCEKDLK 803
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592808559|gb|GAXK01146009.1| (TSA: Calanus finmarchicus comp582603_c0_seq2 transcribed RNA sequence) HSP 1 Score: 65.855 bits (159), Expect = 7.000e-12 Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 0
Query: 235 CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKH 298
C K + C +C++ I D + + KV+HP CM C +C E LRG YL Y++ PICE+D+++
Sbjct: 33 CAVCYKDAAKECALCSEKISEDHILCDNKVFHPRCMKCQVCNEQLRGKYLIYKDWPICEKDFRN 224
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592808560|gb|GAXK01146008.1| (TSA: Calanus finmarchicus comp582603_c0_seq1 transcribed RNA sequence) HSP 1 Score: 60.4622 bits (145), Expect = 6.564e-10 Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 0
Query: 235 CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGS-YLFYEEKPICERDYKHGG 300
C A K + C C + I D ++ N V+HP CM C +CGE +RG Y Y+++PICE+D++ G
Sbjct: 57 CAACYKDAKQGCAECGEKISEDHISCNNLVFHPRCMKCQVCGEQVRGEKYFTYKDRPICEKDFRGVG 257
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592904405|gb|GAXK01053970.1| (TSA: Calanus finmarchicus comp264450_c2_seq3 transcribed RNA sequence) HSP 1 Score: 62.003 bits (149), Expect = 6.890e-10 Identity = 36/104 (34.62%), Postives = 53/104 (50.96%), Query Frame = 0
Query: 203 EIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKITE--------TCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKH 298
E+Q+ +T K C C K++ + TA + + E TC VC++ I GD + S K +H CM C +CGEVL G+Y +K ICE+DY+
Sbjct: 641 EVQSGGCTANGRTFHKECFKCSNCKKMLEEKFFTAEDQPLCENCYKVDDKTCDVCSKAIAGDCLMSKGKHFHQDCMKCSVCGEVLSGTYFTAMDKLICEKDYRE 952 HSP 2 Score: 38.1206 bits (87), Expect = 2.929e-2 Identity = 31/118 (26.27%), Postives = 48/118 (40.68%), Query Frame = 0
Query: 188 KLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCG--ICNKVVTLEG----CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPI--CERDYK 297
K + G+ L + + I + +KS CG I TL+ C KK+ C C + ++G + + YHP C TC +C E L G ++ + C DYK
Sbjct: 371 KCSVCGEVLSGTYFTAMDKLICEKDYRETEKSCSDCGCVISGPYYTLDNEKVVCEKDYKKMLGNCERCGKVVEGKILKVSGGFYHPDCFTCVVCKESLVGVPFSLDDDKLVYCSEDYK 724
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592904407|gb|GAXK01053968.1| (TSA: Calanus finmarchicus comp264450_c2_seq1 transcribed RNA sequence) HSP 1 Score: 62.003 bits (149), Expect = 6.967e-10 Identity = 36/104 (34.62%), Postives = 53/104 (50.96%), Query Frame = 0
Query: 203 EIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKITE--------TCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKH 298
E+Q+ +T K C C K++ + TA + + E TC VC++ I GD + S K +H CM C +CGEVL G+Y +K ICE+DY+
Sbjct: 677 EVQSGGCTANGRTFHKECFKCSNCKKMLEEKFFTAEDQPLCENCYKVDDKTCDVCSKAIAGDCLMSKGKHFHQDCMKCSVCGEVLSGTYFTAMDKLICEKDYRE 988 HSP 2 Score: 38.1206 bits (87), Expect = 2.947e-2 Identity = 31/118 (26.27%), Postives = 48/118 (40.68%), Query Frame = 0
Query: 188 KLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCG--ICNKVVTLEG----CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPI--CERDYK 297
K + G+ L + + I + +KS CG I TL+ C KK+ C C + ++G + + YHP C TC +C E L G ++ + C DYK
Sbjct: 407 KCSVCGEVLSGTYFTAMDKLICEKDYRETEKSCSDCGCVISGPYYTLDNEKVVCEKDYKKMLGNCERCGKVVEGKILKVSGGFYHPDCFTCVVCKESLVGVPFSLDDDKLVYCSEDYK 760
BLAST of EMLSAG00000000452 vs. C. finmarchicus
Match: gi|592904404|gb|GAXK01053971.1| (TSA: Calanus finmarchicus comp264450_c2_seq4 transcribed RNA sequence) HSP 1 Score: 62.003 bits (149), Expect = 6.984e-10 Identity = 36/104 (34.62%), Postives = 53/104 (50.96%), Query Frame = 0
Query: 203 EIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKITE--------TCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKH 298
E+Q+ +T K C C K++ + TA + + E TC VC++ I GD + S K +H CM C +CGEVL G+Y +K ICE+DY+
Sbjct: 641 EVQSGGCTANGRTFHKECFKCSNCKKMLEEKFFTAEDQPLCENCYKVDDKTCDVCSKAIAGDCLMSKGKHFHQDCMKCSVCGEVLSGTYFTAMDKLICEKDYRE 952 HSP 2 Score: 38.5058 bits (88), Expect = 2.651e-2 Identity = 31/118 (26.27%), Postives = 48/118 (40.68%), Query Frame = 0
Query: 188 KLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCG--ICNKVVTLEG----CTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPI--CERDYK 297
K + G+ L + + I + +KS CG I TL+ C KK+ C C + ++G + + YHP C TC +C E L G ++ + C DYK
Sbjct: 371 KCSVCGEVLSGTYFTAMDKLICEKDYRETEKSCSDCGCVISGPYYTLDNEKVVCEKDYKKMLGNCERCGKVVEGKILKVSGGFYHPDCFTCVVCKESLVGVPFSLDDDKLVYCSEDYK 724
BLAST of EMLSAG00000000452 vs. L. salmonis peptides
Match: EMLSAP00000000452 (pep:novel supercontig:LSalAtl2s:LSalAtl2s106:286299:421108:1 gene:EMLSAG00000000452 transcript:EMLSAT00000000452 description:"maker-LSalAtl2s106-snap-gene-4.16") HSP 1 Score: 617.076 bits (1590), Expect = 0.000e+0 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
Query: 1 MASSPLVTELKMTPTRDIRLSPMNSPKINRSRFAXPSDXPKXSRSVTPMGSPALHVRGGTPIYDSEAEFGFEKNRLIGELTSRMKKHAKGSYKNRRDDGSSDEEDDESWRKSTSPRPPVAITTSTALRVKPGGGGAAPSRARSKSPIVLHRPNTQRSRFLXPGHTPRASPRASPMRNAAPSRQVTMSKLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKHGGDSIGGS 306
MASSPLVTELKMTPTRDIRLSPMNSPKINRSRFAXPSDXPKXSRSVTPMGSPALHVRGGTPIYDSEAEFGFEKNRLIGELTSRMKKHAKGSYKNRRDDGSSDEEDDESWRKSTSPRPPVAITTSTALRVKPGGGGAAPSRARSKSPIVLHRPNTQRSRFLXPGHTPRASPRASPMRNAAPSRQVTMSKLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKHGGDSIGGS
Sbjct: 1 MASSPLVTELKMTPTRDIRLSPMNSPKINRSRFAXPSDXPKXSRSVTPMGSPALHVRGGTPIYDSEAEFGFEKNRLIGELTSRMKKHAKGSYKNRRDDGSSDEEDDESWRKSTSPRPPVAITTSTALRVKPGGGGAAPSRARSKSPIVLHRPNTQRSRFLXPGHTPRASPRASPMRNAAPSRQVTMSKLATSGKDLKASLDPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGKKITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYKHGGDSIGGS 306
BLAST of EMLSAG00000000452 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold200_size264178-snap-gene-1.16 (protein:Tk07736 transcript:maker-scaffold200_size264178-snap-gene-1.16-mRNA-1 annotation:"lipoma-preferred partner homolog isoform x4") HSP 1 Score: 132.88 bits (333), Expect = 4.930e-35 Identity = 63/131 (48.09%), Postives = 78/131 (59.54%), Query Frame = 0
Query: 201 DPEIQAKIGNXAVKTVQKSIGTCGICNKVVTLEGCTAFGK----------------------------------KITETCCVCNQPIKGDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
DPEIQAK+GN A K VQKS+G CG+C K + +GCTAFGK ++ E+C VCN PIKGDSV SN K +HP CM CF+CG+ LRG +L +++KPICERDYK
Sbjct: 363 DPEIQAKLGNRATKVVQKSLGACGVCGKGINEDGCTAFGKFYHKNCFKCTVCRQKITGKFFEKAGKPYCAKDFQQLQESCTVCNLPIKGDSVVSNDKPFHPECMKCFICGDSLRGQFLTFQDKPICERDYK 493
BLAST of EMLSAG00000000452 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold719_size106944-processed-gene-0.10 (protein:Tk04737 transcript:snap_masked-scaffold719_size106944-processed-gene-0.10-mRNA-1 annotation:"hypothetical protein YQE_01647 partial") HSP 1 Score: 53.5286 bits (127), Expect = 3.231e-8 Identity = 32/109 (29.36%), Postives = 52/109 (47.71%), Query Frame = 0
Query: 192 SGKDLKASLDPEIQAKIGNXAVKTVQ--KSIGTCGICNKVVTLEGCTAFGKKITETCCVCNQPIK-GDSVASNKKVYHPGCMTCFMCGEVLRGSYLFYEEKPICERDYK 297
+GKDL +L+ ++ I + V S+ + G N T T G + +TC C + ++ G ++ + K YH C C C +L G Y+ + P CERDY+
Sbjct: 196 AGKDLDNALE-DLSNSIADIKTTKVAAPSSLNSSGTTNGRATKTATTTSGGRGDDTCAGCREELRDGQALMALDKQYHVWCFKCQACNALLHGEYMGKDGHPYCERDYQ 303 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000452 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000000452 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000000452 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000452 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000452 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000452 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000452 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s106:286299..421108+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000452-683218 ID=EMLSAG00000000452-683218|Name=EMLSAG00000000452|organism=Lepeophtheirus salmonis|type=gene|length=134810bp|location=Sequence derived from alignment at LSalAtl2s106:286299..421108+ (Lepeophtheirus salmonis)back to top Add to Basket
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