EMLSAG00000000471, EMLSAG00000000471-683237 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:POLR3H "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IBA] [GO:0005813 "centrosome" evidence=IEA] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IBA] [GO:0001056 "RNA polymerase III activity" evidence=IBA] InterPro:IPR004519 InterPro:IPR005576 Pfam:PF03876 GO:GO:0003677 GO:GO:0006351 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0003899 Gene3D:3.30.1490.120 SUPFAM:SSF88798 CTD:171568 KO:K03022 InterPro:IPR013238 Pfam:PF08292 TIGRFAMs:TIGR00448 OrthoDB:EOG70CR7V TreeFam:TF103053 GeneTree:ENSGT00390000004383 EMBL:AADN03001067 RefSeq:NP_001264303.1 UniGene:Gga.12400 Ensembl:ENSGALT00000019488 GeneID:417990 KEGG:gga:417990 PRO:PR:E1BV29 Uniprot:E1BV29) HSP 1 Score: 249.595 bits (636), Expect = 3.779e-82 Identity = 114/205 (55.61%), Postives = 156/205 (76.10%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNS------EKIPYTITASVNGPGLGLINWWN 199 MFVL E+ VR+P Q + L +++ EE+N+K++NKVV NVGL +CL+DI ++ DS++FPGDGASHT V FR +VF PF++EI+ G+IKSCS+DGV +S+GFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV ++F DTSP + E+S N+ ++ PYT+ S++ PGLGL++WW Sbjct: 1 MFVLVEMTDTVRIPPWQFERKLNESIAEELNKKLANKVVYNVGLCICLYDITKLEDSYIFPGDGASHTKVHFRYVVFHPFLDEILVGEIKSCSQDGVHVSIGFFDDIVIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDIGEEIRFRVVDETFVDTSPTGPSSAEASTSNATEEVQKKEAPYTLVGSISEPGLGLLSWWT 204
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:POLR3H "DNA-directed RNA polymerase III subunit RPC8" species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA;TAS] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0006139 "nucleobase-containing compound metabolic process" evidence=IDA] [GO:0006383 "transcription from RNA polymerase III promoter" evidence=IDA;TAS] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IBA] [GO:0006385 "transcription elongation from RNA polymerase III promoter" evidence=TAS] [GO:0006386 "termination of RNA polymerase III transcription" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS] [GO:0032481 "positive regulation of type I interferon production" evidence=TAS] [GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA] [GO:0045087 "innate immune response" evidence=TAS] [GO:0051607 "defense response to virus" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0001056 "RNA polymerase III activity" evidence=IBA] Reactome:REACT_71 InterPro:IPR004519 InterPro:IPR005576 Pfam:PF03876 GO:GO:0005829 Reactome:REACT_6900 GO:GO:0045087 GO:GO:0005813 GO:GO:0003677 EMBL:CH471095 GO:GO:0051607 EMBL:AL023553 InterPro:IPR012340 SUPFAM:SSF50249 Reactome:REACT_1788 GO:GO:0032481 GO:GO:0005666 GO:GO:0003899 GO:GO:0006386 GO:GO:0006385 eggNOG:COG1095 Gene3D:3.30.1490.120 SUPFAM:SSF88798 CTD:171568 HOGENOM:HOG000157370 HOVERGEN:HBG044510 KO:K03022 InterPro:IPR013238 Pfam:PF08292 TIGRFAMs:TIGR00448 EMBL:AY092087 EMBL:AB051452 EMBL:CR456459 EMBL:BC017248 EMBL:BC088367 RefSeq:NP_001018060.1 RefSeq:NP_001018062.1 RefSeq:NP_001269813.1 RefSeq:NP_001269814.1 RefSeq:NP_612211.1 UniGene:Hs.712617 ProteinModelPortal:Q9Y535 SMR:Q9Y535 BioGrid:128147 IntAct:Q9Y535 STRING:9606.ENSP00000347345 DMDM:29428071 PaxDb:Q9Y535 PRIDE:Q9Y535 DNASU:171568 Ensembl:ENST00000337566 Ensembl:ENST00000355209 Ensembl:ENST00000396504 Ensembl:ENST00000407461 GeneID:171568 KEGG:hsa:171568 UCSC:uc003baf.3 UCSC:uc003bai.2 GeneCards:GC22M041921 HGNC:HGNC:30349 HPA:HPA046787 neXtProt:NX_Q9Y535 PharmGKB:PA134994174 InParanoid:Q9Y535 OMA:NVGLCIA OrthoDB:EOG70CR7V PhylomeDB:Q9Y535 TreeFam:TF103053 GenomeRNAi:171568 NextBio:89296 PRO:PR:Q9Y535 ArrayExpress:Q9Y535 Bgee:Q9Y535 CleanEx:HS_POLR3H Genevestigator:Q9Y535 Uniprot:Q9Y535) HSP 1 Score: 249.21 bits (635), Expect = 6.654e-82 Identity = 117/205 (57.07%), Postives = 155/205 (75.61%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKI-----PYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP P+ + +SE++ PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRCVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPT-GPSSADATTSSEELPKKEAPYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:Polr3h "polymerase (RNA) III (DNA directed) polypeptide H" species:10116 "Rattus norvegicus" [GO:0001056 "RNA polymerase III activity" evidence=IBA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=ISO;IBA] [GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0006139 "nucleobase-containing compound metabolic process" evidence=ISO] [GO:0006383 "transcription from RNA polymerase III promoter" evidence=ISO] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IBA] [GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR004519 InterPro:IPR005576 Pfam:PF03876 RGD:1305889 GO:GO:0005813 GO:GO:0003677 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0006383 EMBL:CH473950 GO:GO:0005666 GO:GO:0003899 eggNOG:COG1095 Gene3D:3.30.1490.120 SUPFAM:SSF88798 CTD:171568 HOGENOM:HOG000157370 HOVERGEN:HBG044510 KO:K03022 InterPro:IPR013238 Pfam:PF08292 TIGRFAMs:TIGR00448 OMA:NVGLCIA OrthoDB:EOG70CR7V TreeFam:TF103053 GeneTree:ENSGT00390000004383 EMBL:AABR06052102 EMBL:BC167088 RefSeq:NP_001120767.1 UniGene:Rn.13037 STRING:10116.ENSRNOP00000005943 Ensembl:ENSRNOT00000005943 GeneID:300088 KEGG:rno:300088 UCSC:RGD:1305889 NextBio:646311 PRO:PR:B2RZB0 Genevestigator:B2RZB0 Uniprot:B2RZB0) HSP 1 Score: 242.276 bits (617), Expect = 3.024e-79 Identity = 117/205 (57.07%), Postives = 151/205 (73.66%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPN-----VAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP A + P E PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPTGPSSAEAASSSEELPKKEA-PYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:Polr3h "polymerase (RNA) III (DNA directed) polypeptide H" species:10090 "Mus musculus" [GO:0001056 "RNA polymerase III activity" evidence=IBA] [GO:0002376 "immune system process" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=ISO;IBA] [GO:0005813 "centrosome" evidence=ISO] [GO:0006139 "nucleobase-containing compound metabolic process" evidence=ISO] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006383 "transcription from RNA polymerase III promoter" evidence=ISO] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IBA] [GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO] [GO:0045087 "innate immune response" evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA] InterPro:IPR004519 InterPro:IPR005576 Pfam:PF03876 MGI:MGI:1926179 GO:GO:0045087 GO:GO:0005813 GO:GO:0003677 GO:GO:0051607 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0006383 GO:GO:0005666 GO:GO:0003899 eggNOG:COG1095 Gene3D:3.30.1490.120 SUPFAM:SSF88798 CTD:171568 HOGENOM:HOG000157370 HOVERGEN:HBG044510 KO:K03022 InterPro:IPR013238 Pfam:PF08292 TIGRFAMs:TIGR00448 OMA:NVGLCIA OrthoDB:EOG70CR7V TreeFam:TF103053 EMBL:AK019868 EMBL:BC010793 RefSeq:NP_084505.2 UniGene:Mm.215115 ProteinModelPortal:Q9D2C6 SMR:Q9D2C6 PaxDb:Q9D2C6 PRIDE:Q9D2C6 Ensembl:ENSMUST00000023113 GeneID:78929 KEGG:mmu:78929 UCSC:uc007wxr.1 GeneTree:ENSGT00390000004383 InParanoid:Q9D2C6 ChiTaRS:POLR3H NextBio:349786 PRO:PR:Q9D2C6 Bgee:Q9D2C6 CleanEx:MM_POLR3H Genevestigator:Q9D2C6 Uniprot:Q9D2C6) HSP 1 Score: 242.276 bits (617), Expect = 3.024e-79 Identity = 117/205 (57.07%), Postives = 151/205 (73.66%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPN-----VAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP A + P E PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPTGPSSAEAASSSEELPKKEA-PYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:POLR3H "DNA-directed RNA polymerase III subunit RPC8" species:9913 "Bos taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IBA] [GO:0005813 "centrosome" evidence=IEA] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IBA] [GO:0001056 "RNA polymerase III activity" evidence=IBA] InterPro:IPR004519 InterPro:IPR005576 Pfam:PF03876 GO:GO:0005813 GO:GO:0003677 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0006383 GO:GO:0005666 GO:GO:0003899 Gene3D:3.30.1490.120 SUPFAM:SSF88798 InterPro:IPR013238 Pfam:PF08292 TIGRFAMs:TIGR00448 OMA:NVGLCIA OrthoDB:EOG70CR7V TreeFam:TF103053 GeneTree:ENSGT00390000004383 EMBL:DAAA02014732 Ensembl:ENSBTAT00000006987 Uniprot:F1ML03) HSP 1 Score: 241.121 bits (614), Expect = 9.672e-79 Identity = 116/205 (56.59%), Postives = 151/205 (73.66%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPN-----VAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEE+RFRV +SF DTSP A + P E PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDIGEEVRFRVVDESFVDTSPTGPSSAEAASSSEELPKKEA-PYTLMGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:POLR3H "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IBA] [GO:0005813 "centrosome" evidence=IEA] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IBA] [GO:0001056 "RNA polymerase III activity" evidence=IBA] InterPro:IPR004519 InterPro:IPR005576 Pfam:PF03876 GO:GO:0005813 GO:GO:0003677 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0006383 GO:GO:0005666 GO:GO:0003899 Gene3D:3.30.1490.120 SUPFAM:SSF88798 CTD:171568 KO:K03022 InterPro:IPR013238 Pfam:PF08292 TIGRFAMs:TIGR00448 OMA:NVGLCIA OrthoDB:EOG70CR7V TreeFam:TF103053 GeneTree:ENSGT00390000004383 EMBL:CU633382 RefSeq:XP_001929168.1 UniGene:Ssc.54915 Ensembl:ENSSSCT00000000069 GeneID:100157033 KEGG:ssc:100157033 Uniprot:F1SRD6) HSP 1 Score: 240.35 bits (612), Expect = 1.647e-78 Identity = 116/205 (56.59%), Postives = 150/205 (73.17%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPN-----VAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEE+RFRV +SF DTSP A + P E PYT+ S+ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDTGEELRFRVVDESFVDTSPTGPSSAEAASSSEELPRKEA-PYTLVGSICEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:POLR3H "DNA-directed RNA polymerase III subunit RPC8" species:9913 "Bos taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA] InterPro:IPR004519 InterPro:IPR005576 Pfam:PF03876 GO:GO:0005634 GO:GO:0045087 GO:GO:0003677 GO:GO:0006351 GO:GO:0051607 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0003899 eggNOG:COG1095 Gene3D:3.30.1490.120 SUPFAM:SSF88798 EMBL:BC111227 RefSeq:NP_001070430.1 UniGene:Bt.55567 ProteinModelPortal:Q2T9X1 STRING:9913.ENSBTAP00000006987 PRIDE:Q2T9X1 GeneID:767843 KEGG:bta:767843 CTD:171568 HOGENOM:HOG000157370 HOVERGEN:HBG044510 InParanoid:Q2T9X1 KO:K03022 NextBio:20918210 InterPro:IPR013238 Pfam:PF08292 TIGRFAMs:TIGR00448 Uniprot:Q2T9X1) HSP 1 Score: 239.58 bits (610), Expect = 3.411e-78 Identity = 115/205 (56.10%), Postives = 151/205 (73.66%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPN-----VAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKV+ NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEE+RFRV +SF DTSP A + P E PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIDEELNKKLANKVMYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDIGEEVRFRVVDESFVDTSPTGPSSAEAASSSEELPKKEA-PYTLMGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:POLR3H "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IBA] [GO:0005813 "centrosome" evidence=IEA] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IBA] [GO:0001056 "RNA polymerase III activity" evidence=IBA] InterPro:IPR004519 InterPro:IPR005576 Pfam:PF03876 GO:GO:0005813 GO:GO:0003677 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0006383 GO:GO:0005666 GO:GO:0003899 Gene3D:3.30.1490.120 SUPFAM:SSF88798 CTD:171568 KO:K03022 InterPro:IPR013238 Pfam:PF08292 TIGRFAMs:TIGR00448 OMA:NVGLCIA OrthoDB:EOG70CR7V TreeFam:TF103053 GeneTree:ENSGT00390000004383 EMBL:AAEX03007296 RefSeq:XP_849136.1 ProteinModelPortal:E2RRG9 Ensembl:ENSCAFT00000001618 GeneID:607850 KEGG:cfa:607850 NextBio:20893547 Uniprot:E2RRG9) HSP 1 Score: 239.195 bits (609), Expect = 5.210e-78 Identity = 115/205 (56.10%), Postives = 150/205 (73.17%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPN-----VAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV +VGL +CLFDI + D++VFPGDGASHT V FR +VF PF++EI+ G+IK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP A + P E PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYSVGLCICLFDITRLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGRIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPTGPSSAEATSSSEELPKKEA-PYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:polr3h "polymerase (RNA) III (DNA directed) polypeptide H" species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] InterPro:IPR004519 InterPro:IPR005576 Pfam:PF03876 ZFIN:ZDB-GENE-040718-179 GO:GO:0003677 GO:GO:0006351 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0003899 eggNOG:COG1095 Gene3D:3.30.1490.120 SUPFAM:SSF88798 CTD:171568 HOGENOM:HOG000157370 HOVERGEN:HBG044510 KO:K03022 InterPro:IPR013238 Pfam:PF08292 TIGRFAMs:TIGR00448 EMBL:BC076336 RefSeq:NP_001002476.1 UniGene:Dr.78164 ProteinModelPortal:Q6DGK6 STRING:7955.ENSDARP00000056036 GeneID:436749 KEGG:dre:436749 InParanoid:Q6DGK6 NextBio:20831187 PRO:PR:Q6DGK6 Uniprot:Q6DGK6) HSP 1 Score: 238.424 bits (607), Expect = 1.262e-77 Identity = 114/214 (53.27%), Postives = 151/214 (70.56%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEES---------------SEPNSEKIPYTITASVNGPGLGLINWWN 199 MFVL E++ VR+P + L +A+ EE+N+K++NKVV NVGL +CL+DI ++ DS++FPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY T D G HDL+MD GEEIRFRVT + F DTSP+ ++ ++ PYT+ SV+ PGLGL++WWN Sbjct: 1 MFVLVEMRDTVRIPPWSFQRPLNEAVAEELNKKLANKVVYNVGLCICLYDITKLEDSYIFPGDGASHTKVHFRYVVFHPFLDEILLGKIKGCSAEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYET-DEGTHDLYMDQGEEIRFRVTDEVFVDTSPSGPSADKEAPGTGAAAAPPAGAEDAAQQKESPYTLIGSVSEPGLGLLSWWN 213
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:CG7339 species:7227 "Drosophila melanogaster" [GO:0003899 "DNA-directed RNA polymerase activity" evidence=ISS] [GO:0006383 "transcription from RNA polymerase III promoter" evidence=ISS] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=ISS] [GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR005576 Pfam:PF03876 EMBL:AE014296 GO:GO:0022008 GO:GO:0006351 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0003899 eggNOG:COG1095 Gene3D:3.30.1490.120 SUPFAM:SSF88798 KO:K03022 InterPro:IPR013238 Pfam:PF08292 OMA:NVGLCIA OrthoDB:EOG70CR7V GeneTree:ENSGT00390000004383 EMBL:AY118479 RefSeq:NP_001261720.1 RefSeq:NP_648490.1 UniGene:Dm.11797 SMR:Q9VTL6 IntAct:Q9VTL6 STRING:7227.FBpp0075838 EnsemblMetazoa:FBtr0076107 EnsemblMetazoa:FBtr0331530 GeneID:39310 KEGG:dme:Dmel_CG7339 UCSC:CG7339-RA FlyBase:FBgn0036188 InParanoid:Q9VTL6 GenomeRNAi:39310 NextBio:812992 PRO:PR:Q9VTL6 Uniprot:Q9VTL6) HSP 1 Score: 229.18 bits (583), Expect = 1.065e-73 Identity = 108/213 (50.70%), Postives = 145/213 (68.08%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSE--------------KIPYTITASVNGPGLGLINWWN 199 MFVL+ELK VR+ Q L DA+R+EI+RK++NKV+LNVGL + L DI+ + DS + PGDGASHT V FR +VFRP + +I GKI++CS++GV ++LGFF+DI +P +LQ+P RFDEA+Q WVWEYP EDG KHDLFMD GE I+FRV+ + F +TSP P E+ K PY I ++N GLG+++WW+ Sbjct: 1 MFVLAELKDNVRIAPDQFHLKLVDAVRDEIDRKLANKVLLNVGLCIALKDIVSLKDSIILPGDGASHTEVLFRYVVFRPMVGTVITGKIRNCSREGVHVTLGFFDDILIPHAALQHPSRFDEAEQAWVWEYPLEDGAKHDLFMDVGEPIKFRVSREIFEETSPIGPPKTEAQTQQGASTSAAVASATSQEVKTPYRIIGAINESGLGVLSWWD 213
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592860033|gb|GAXK01097529.1| (TSA: Calanus finmarchicus comp38167_c0_seq1 transcribed RNA sequence) HSP 1 Score: 265.003 bits (676), Expect = 6.416e-88 Identity = 120/200 (60.00%), Postives = 156/200 (78.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVLSE+++L+RL KSL D L +EINRK++NKV++NVGL + L DILE+G+SF+FPGDGASHT V+FR+LVFRP MEE++ GKIKSCSK+GV +SL FF+DI +P ESLQ+P RFDE + VWVWEYP E+G HDLFMDPGE+IR RV S+ F DT P ES + ++ PY++ ++N PGLGL++WWN+ Sbjct: 147 MFVLSEIRTLIRLLPRGFDKSLEDQLTDEINRKLANKVMINVGLCLSLHDILEVGESFLFPGDGASHTKVRFRMLVFRPQMEEVLTGKIKSCSKEGVHVSLEFFDDILIPAESLQHPSRFDETESVWVWEYPVEEGEHHDLFMDPGEKIRMRVVSEQFVDTGPTKPKITESEQEEAKTPPYSLVGTINEPGLGLLSWWNS 746
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592890126|gb|GAXK01068249.1| (TSA: Calanus finmarchicus comp17989_c0_seq1 transcribed RNA sequence) HSP 1 Score: 43.5134 bits (101), Expect = 1.692e-4 Identity = 32/154 (20.78%), Postives = 64/154 (41.56%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVT 154 MF L + L G L D +++++ +V G + + I +G + PG G V+++ +VFRPF E+++ + +K G+ +G ++ S+ FD ++ E D+ + +EIR ++ Sbjct: 175 MFYHISLDHEIMLHPRYFGPQLMDTVKQKLFTEVEGTCTGKYGFVIAVTTIDCVGAGLIQPGQGFVLYPVKYKAIVFRPFKGEVLDAVVTQVNKVGLFTEIGPLS-CFISRHSIPADMSFDPNSNPPCYKTSDE-----DMVIQQDDEIRLKIV 618
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592799496|gb|GAXK01155072.1| (TSA: Calanus finmarchicus comp1485599_c0_seq1 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 1.080e+0 Identity = 20/71 (28.17%), Postives = 33/71 (46.48%), Query Frame = 0 Query: 86 NGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQ 156 NG I + + ++G +DI SLQ +D + + E PT D K ++ P + RFR +S+ Sbjct: 1428 NGLISTPQEQETVDTIGVTDDIIPAISSLQTKETWDNIGETIIGEIPTRDLPKVEILEQPCQSYRFRYSSE 1640
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592799495|gb|GAXK01155073.1| (TSA: Calanus finmarchicus comp1485599_c0_seq2 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 1.108e+0 Identity = 20/71 (28.17%), Postives = 33/71 (46.48%), Query Frame = 0 Query: 86 NGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQ 156 NG I + + ++G +DI SLQ +D + + E PT D K ++ P + RFR +S+ Sbjct: 1402 NGLISTPQEQETVDTIGVTDDIIPAISSLQTKETWDNIGETIIGEIPTRDLPKVEILEQPCQSYRFRYSSE 1614
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592779557|gb|GAXK01175011.1| (TSA: Calanus finmarchicus comp1118069_c0_seq3 transcribed RNA sequence) HSP 1 Score: 29.261 bits (64), Expect = 5.152e+0 Identity = 10/30 (33.33%), Postives = 22/30 (73.33%), Query Frame = 0 Query: 71 QFRLLVFRPFMEEIINGKIKSCSKDGVQIS 100 +F++ F+ ++ I++GKI C KDG++++ Sbjct: 221 EFKMTEFQSMLDFILDGKIDYCEKDGMKLA 310
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592779559|gb|GAXK01175009.1| (TSA: Calanus finmarchicus comp1118069_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 7.061e+0 Identity = 10/31 (32.26%), Postives = 22/31 (70.97%), Query Frame = 0 Query: 70 VQFRLLVFRPFMEEIINGKIKSCSKDGVQIS 100 +F++ F+ ++ I++GKI C KDG++++ Sbjct: 218 TEFKMTEFQSMLDFILDGKIDYCEKDGMKLA 310
BLAST of EMLSAG00000000471 vs. L. salmonis peptides
Match: EMLSAP00000000471 (pep:novel supercontig:LSalAtl2s:LSalAtl2s106:813843:814445:1 gene:EMLSAG00000000471 transcript:EMLSAT00000000471 description:"augustus_masked-LSalAtl2s106-processed-gene-8.4") HSP 1 Score: 410.223 bits (1053), Expect = 5.865e-147 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT Sbjct: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|29428071|sp|Q9Y535.1|RPC8_HUMAN (RecName: Full=DNA-directed RNA polymerase III subunit RPC8; Short=RNA polymerase III subunit C8; AltName: Full=DNA-directed RNA polymerase III subunit H; AltName: Full=RNA polymerase III subunit 22.9 kDa subunit; Short=RPC22.9) HSP 1 Score: 249.21 bits (635), Expect = 1.423e-83 Identity = 117/205 (57.07%), Postives = 155/205 (75.61%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKI-----PYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP P+ + +SE++ PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRCVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPT-GPSSADATTSSEELPKKEAPYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|29427995|sp|Q9D2C6.2|RPC8_MOUSE (RecName: Full=DNA-directed RNA polymerase III subunit RPC8; AltName: Full=DNA-directed RNA polymerase III subunit H; AltName: Full=RNA polymerase III subunit C7) HSP 1 Score: 242.276 bits (617), Expect = 6.729e-81 Identity = 117/205 (57.07%), Postives = 151/205 (73.66%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPN-----VAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP A + P E PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPTGPSSAEAASSSEELPKKEA-PYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|122136999|sp|Q2T9X1.1|RPC8_BOVIN (RecName: Full=DNA-directed RNA polymerase III subunit RPC8; Short=RNA polymerase III subunit C8; AltName: Full=DNA-directed RNA polymerase III subunit 22.9 kDa polypeptide; AltName: Full=DNA-directed RNA polymerase III subunit H) HSP 1 Score: 239.58 bits (610), Expect = 7.711e-80 Identity = 115/205 (56.10%), Postives = 151/205 (73.66%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPN-----VAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKV+ NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEE+RFRV +SF DTSP A + P E PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIDEELNKKLANKVMYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDIGEEVRFRVVDESFVDTSPTGPSSAEAASSSEELPKKEA-PYTLMGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|74582844|sp|O94285.1|RPC8_SCHPO (RecName: Full=DNA-directed RNA polymerase III subunit rpc8; Short=RNA polymerase III subunit C8; AltName: Full=RNA polymerase III subunit C25) HSP 1 Score: 171.014 bits (432), Expect = 6.569e-53 Identity = 83/203 (40.89%), Postives = 131/203 (64.53%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGK-HDLFMDPGEEIRFRVTSQSFSDTSPNV---APTEESSEPNSEKIPYTITASVNGPGLGLINWWN 199 MF+LS ++ + S K +AL EEI++K +NKV+ N+GLA+C++D L+IG+ + GDG+S+ +V FRL++FRPF E++ GKIKSCS++G+++++ FF+DI++P + L +P F ++ WVW+ EDG + +L+ D EEIRF++ S+ F D SP A +E PYT+ AS + GLG+ WW Sbjct: 1 MFLLSRFSDIISIHPSNFWKPTKEALAEEIHKKYANKVIQNIGLAICVYDFLKIGEGIIKYGDGSSYMNVVFRLIIFRPFRGEVMLGKIKSCSEEGIRVTISFFDDIFIPKDMLFDPCVFRPDERAWVWKIEGEDGSEGTELYFDIDEEIRFQIESEDFVDISPKRNKNATAITGTEALESVSPYTLIASCSRDGLGIPAWWK 203
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|549722|sp|P35718.1|RPC8_YEAST (RecName: Full=DNA-directed RNA polymerase III subunit RPC8; Short=RNA polymerase III subunit C8; AltName: Full=DNA-directed RNA polymerase III 25 kDa polypeptide; AltName: Full=RNA polymerase III subunit C25) HSP 1 Score: 140.584 bits (353), Expect = 8.170e-41 Identity = 73/215 (33.95%), Postives = 120/215 (55.81%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQIS-LGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSE---------------PNSEKIP-YTITASVNGPGLGLINWW 198 MF+LS++ LVR+P Q + A+ ++N K +NK++ NVGL + ++D+L + + + PGDG+S+ +V FR +VF+PF+ EI+ G I C+ +G+++S LG F+DI++P L + + W+W P ++ K L+ D E+IRFR+ + F D P E E P +EK P Y + S G+GL++WW Sbjct: 1 MFILSKIADLVRIPPDQFHRDTISAITHQLNNKFANKIIPNVGLCITIYDLLTVEEGQLKPGDGSSYINVTFRAVVFKPFLGEIVTGWISKCTAEGIKVSLLGIFDDIFIPQNMLFEGCYYTPEESAWIW--PMDEETK--LYFDVNEKIRFRIEREVFVDVKPKSPKERELEERAQLENEIEGKNEETPQNEKPPAYALLGSCQTDGMGLVSWW 211
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|122057759|sp|Q557J3.1|RPC8_DICDI (RecName: Full=DNA-directed RNA polymerase III subunit rpc8; Short=RNA polymerase III subunit C8; AltName: Full=DNA-directed RNA polymerase III subunit H) HSP 1 Score: 137.117 bits (344), Expect = 5.019e-39 Identity = 76/220 (34.55%), Postives = 118/220 (53.64%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPT--------------EESSEPNSE--------KIPYTITASVNGPGLGLINWW 198 MF L ++ VR+ SQ + + +EI +K ++KVVLN GL V L+DIL GDS+V GDG +H V+FR++VF+PF E++ G IK S+ +QISLGFF +I++ P L NP +++ + +W WE+ ++ LF + G +RF++ F+ AP+ E E E K P + S+ GLG+++WW Sbjct: 1 MFHLITIEDKVRIAPSQFNNEV-QTIEDEIEKKYTSKVVLNAGLFVALYDILGTGDSYVHSGDGGAHLMVRFRMVVFKPFKGEVLEGVIKKSSRQSIQISLGFFHEIYLNPIELPNPSNYNQEEGLWYWEW-----NENQLFFEDGGRVRFKIDQVEFNPEISQPAPSPKNVNTEAMDSYSLREYKEKQIENENLLKQVKSPLILKVSMREAGLGMVSWW 214
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|73920767|sp|P39466.2|RPOE_SULAC (RecName: Full=DNA-directed RNA polymerase subunit E) HSP 1 Score: 66.6254 bits (161), Expect = 9.090e-13 Identity = 45/199 (22.61%), Postives = 91/199 (45.73%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWN 199 MF L K +VR+P G+S+ + + + ++ K++ ++G+ + + + + F+ GDGA++ V+F +LV+ P + E+I G++ GV +++G + + + + +FD + + E K + G+ +R + S S S S ++P I ++ P LG I W N Sbjct: 1 MFKLVRAKGIVRIPPEYFGQSVDEIAIKILRQEYQEKLIKDIGVVLGIVNAKASEEGFIIFGDGATYHEVEFDMLVYTPIIHEVIEGEVSQVDNYGVYVNMGPVDGLVHISQITDDNLKFDSNRGILIGE-------KSKKSIQKGDRVRAMIISASMS----------------SGRLP-RIALTMKQPYLGKIEWIN 175
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|2500642|sp|Q57840.1|RPOE1_METJA (RecName: Full=DNA-directed RNA polymerase subunit E') HSP 1 Score: 58.151 bits (139), Expect = 1.398e-9 Identity = 42/197 (21.32%), Postives = 90/197 (45.69%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINW 197 M+ + E+ +V++P + GK L + +++ + K ++ +VG + + D+ +IG+ V GDG+++ V F LV+ P M E+I G++ + G + LG + + + + + +D + + G + ++ G+ +R R+ + S ++ KI T+ P LG + W Sbjct: 1 MYKILEIADVVKVPPEEFGKDLKETVKKILMEKYEGRLDKDVGFVLSIVDVKDIGEGKVVHGDGSAYHPVVFETLVYIPEMYELIEGEVVDVVEFGSFVRLGPLDGLIHVSQIMDDYVSYDPKREAII-------GKETGKVLEIGDYVRARIVAISL-----------KAERKRGSKIALTMRQ----PYLGKLEW 175
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|464672|sp|P34087.1|RPB7_YEAST (RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7; AltName: Full=B16) HSP 1 Score: 57.7658 bits (138), Expect = 1.437e-9 Identity = 28/104 (26.92%), Postives = 57/104 (54.81%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCL--FDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLG 102 MF + +L + L S G + L+ ++ +V G +C+ +D ++I + P DG++ +V++R +VF+PF E+++G + SCS+ G ++ +G Sbjct: 1 MFFIKDLSLNITLHPSFFGPRMKQYLKTKLLEEVEGSCTGKFGYILCVLDYDNIDIQRGRILPTDGSAEFNVKYRAVVFKPFKGEVVDGTVVSCSQHGFEVQVG 104
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|3334317|sp|O14459.1|RPB7_SCHPO (RecName: Full=DNA-directed RNA polymerase II subunit rpb7; Short=RNA polymerase II subunit B7) HSP 1 Score: 52.7582 bits (125), Expect = 9.929e-8 Identity = 36/135 (26.67%), Postives = 61/135 (45.19%), Query Frame = 0 Query: 2 FVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFD--ILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLG----FFEDIWVPPES----LQNPYRFDEADQV 126 F L EL + L S G + D L+ ++ V G +C+ D ++I V PG G + V++R +++RPF E+++ + + +K G ++G F VPP+ NP + DQV Sbjct: 3 FFLKELSLTISLHPSYFGPRMQDYLKAKLLADVEGTCSGQYGYIICVLDSNTIDIDKGRVVPGQGFAEFEVKYRAVLWRPFRGEVVDAIVTTVNKMGFFANIGPLNVFVSSHLVPPDMKFDPTANPPNYSGEDQV 137
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: XP_394665.1 (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Apis mellifera]) HSP 1 Score: 248.825 bits (634), Expect = 8.487e-84 Identity = 116/201 (57.71%), Postives = 153/201 (76.12%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSD---TSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWW 198 MFVL+ELK VR+P ++ + L DA+ +E+NRK++NKV LNVGL + L DI +I +S++FPGDGASHT V FR +VFRPFMEEI+ GKI+SCS DGV ++LGFFEDI +PP LQ+P RFD+ +Q WVWEY T DG KHDLFMD GE IRFRV S++F++ T PN++ E+SE + PYT+ +++ PGLGL+ WW Sbjct: 1 MFVLAELKDTVRIPPAEFKQKLNDAITDELNRKLANKVYLNVGLCIALHDITKIEESYIFPGDGASHTKVIFRYIVFRPFMEEILIGKIRSCSIDGVHVTLGFFEDIVIPPHKLQHPSRFDQMEQAWVWEYDTGDGEKHDLFMDAGEIIRFRVVSETFTEALPTGPNISGETETSEAKNIS-PYTLGGAIDEPGLGLLTWW 200
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: gb|EEZ99545.1| (DNA-directed RNA polymerase III subunit RPC8-like Protein [Tribolium castaneum]) HSP 1 Score: 248.054 bits (632), Expect = 1.370e-83 Identity = 107/199 (53.77%), Postives = 155/199 (77.89%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWN 199 MF+++E+K++ R+P L DA+ E+N+K++NKVVLNVGL + L+DI + +SF+FPGDGASHT V FR +VFRPF+EEI+ GKI+SCS++GV ++LGFF+DI +PP +LQ+P +F+E +Q WVWEY T DG KHDLFMD GE I+FRVT++ F++T P +E+ + + K+PY++T S+N PGLGL++WW+ Sbjct: 1 MFIVAEMKNVTRIPPELFNLKLNDAIAGELNKKLANKVVLNVGLCIALYDITSLQESFIFPGDGASHTRVSFRYIVFRPFIEEILVGKIRSCSQEGVHVTLGFFDDILIPPSALQHPSKFNETEQAWVWEYDTGDGCKHDLFMDAGETIKFRVTAEFFNETCP-TGSLQETQDKSENKVPYSLTGSINEPGLGLLSWWD 198
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: EEB10445.1 (DNA-directed RNA polymerase III subunit 22.9 kDa polypeptide, putative [Pediculus humanus corporis]) HSP 1 Score: 239.965 bits (611), Expect = 1.957e-80 Identity = 117/200 (58.50%), Postives = 156/200 (78.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNS--EKIPYTITASVNGPGLGLINWW 198 MFVL+E+K +R+ K L DA+ EEIN+K++NKVV+NVGL++ L+DI E+GDS + PGDG HT V FR +VFRPF+ EI+ GK+KSCS++GV ++LGFF+DI +P +LQ+P RFDEA+QVWVWEY D KHDLFMD GE IRFRVT+++F +TSP V P E SS+ +S K+PY++TAS+N PGLGL++WW Sbjct: 1 MFVLAEIKDYIRISPCNFHKPLKDAISEEINKKLANKVVMNVGLSIALWDISELGDSHIIPGDGCFHTRVCFRYVVFRPFLTEILVGKVKSCSQEGVVVTLGFFDDIIIPSSALQHPSRFDEAEQVWVWEYQV-DEEKHDLFMDIGEPIRFRVTAETFEETSP-VGP-ENSSDGDSVETKVPYSLTASINEPGLGLMSWW 197
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: EAA00210.3 (AGAP012122-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 238.039 bits (606), Expect = 5.932e-79 Identity = 112/213 (52.58%), Postives = 152/213 (71.36%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEE---------------SSEPNSEKIPYTITASVNGPGLGLINWW 198 MFVL+ELK VR+ G LP+A+++EINRK++NKV+LNVGL + L DI+++GDS + PGDGASHT V FR +VFRP + ++I GKI+SCS++GV I+LGFF+DI +PP +LQ+P R++EA+Q WVWEYP EDG HDL+MD GE I+FRV+ + F ++SP P +E SS S K PY I A++N GLGL++WW Sbjct: 1 MFVLAELKDNVRIAPELFGLKLPEAIKDEINRKLANKVLLNVGLCIALKDIVKLGDSIILPGDGASHTEVNFRYIVFRPMIGDVITGKIRSCSREGVHITLGFFDDILIPPSALQHPSRYEEAEQAWVWEYPLEDGNTHDLYMDIGENIKFRVSGEVFEESSPIGPPDQEVPSSSTGASTSGGAGSSGQESNKTPYRIVAAINESGLGLLSWW 213
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: gb|EEC11553.1| (DNA-directed RNA polymerase subunit E', putative [Ixodes scapularis]) HSP 1 Score: 229.565 bits (584), Expect = 2.739e-76 Identity = 106/201 (52.74%), Postives = 154/201 (76.62%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNS--EKIPYTITASVNGPGLGLINWWN 199 MFV+SE+ +R+P + DA+ E++NR+++NKVV+NVGL + LFD+ +I DS + PGDG+ HT V+FR +VFRPFM+E++ GKI+SCS++GV +S+GFF+DI +PP++LQ+P RFDEA+Q+WVWEY ++D KHD+FMD GE+IRFRV +++F DTSP E SE S ++IPY++T S++ GLGL+ WW Sbjct: 1 MFVISEMSDNIRIPPWLFRLNPNDAIVEQLNRRLANKVVINVGLCIALFDVTKIEDSKILPGDGSFHTTVEFRYVVFRPFMDEVLVGKIRSCSQEGVYVSMGFFDDILIPPDALQHPSRFDEAEQLWVWEYESDD-KKHDMFMDLGEQIRFRVVAETFVDTSPVGPEMAEMSENESKEKRIPYSLTGSISESGLGLLKWWT 200
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: AGB94414.1 (CG7339, isoform B [Drosophila melanogaster]) HSP 1 Score: 229.18 bits (583), Expect = 1.295e-75 Identity = 108/213 (50.70%), Postives = 145/213 (68.08%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSE--------------KIPYTITASVNGPGLGLINWWN 199 MFVL+ELK VR+ Q L DA+R+EI+RK++NKV+LNVGL + L DI+ + DS + PGDGASHT V FR +VFRP + +I GKI++CS++GV ++LGFF+DI +P +LQ+P RFDEA+Q WVWEYP EDG KHDLFMD GE I+FRV+ + F +TSP P E+ K PY I ++N GLG+++WW+ Sbjct: 1 MFVLAELKDNVRIAPDQFHLKLVDAVRDEIDRKLANKVLLNVGLCIALKDIVSLKDSIILPGDGASHTEVLFRYVVFRPMVGTVITGKIRNCSREGVHVTLGFFDDILIPHAALQHPSRFDEAEQAWVWEYPLEDGAKHDLFMDVGEPIKFRVSREIFEETSPIGPPKTEAQTQQGASTSAAVASATSQEVKTPYRIIGAINESGLGVLSWWD 213
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: AAF50032.1 (CG7339, isoform A [Drosophila melanogaster]) HSP 1 Score: 229.18 bits (583), Expect = 1.295e-75 Identity = 108/213 (50.70%), Postives = 145/213 (68.08%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSE--------------KIPYTITASVNGPGLGLINWWN 199 MFVL+ELK VR+ Q L DA+R+EI+RK++NKV+LNVGL + L DI+ + DS + PGDGASHT V FR +VFRP + +I GKI++CS++GV ++LGFF+DI +P +LQ+P RFDEA+Q WVWEYP EDG KHDLFMD GE I+FRV+ + F +TSP P E+ K PY I ++N GLG+++WW+ Sbjct: 1 MFVLAELKDNVRIAPDQFHLKLVDAVRDEIDRKLANKVLLNVGLCIALKDIVSLKDSIILPGDGASHTEVLFRYVVFRPMVGTVITGKIRNCSREGVHVTLGFFDDILIPHAALQHPSRFDEAEQAWVWEYPLEDGAKHDLFMDVGEPIKFRVSREIFEETSPIGPPKTEAQTQQGASTSAAVASATSQEVKTPYRIIGAINESGLGVLSWWD 213
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: EFX89005.1 (hypothetical protein DAPPUDRAFT_41099 [Daphnia pulex]) HSP 1 Score: 225.328 bits (573), Expect = 1.725e-74 Identity = 106/204 (51.96%), Postives = 153/204 (75.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSP----NVAPTEESSEP--NSEKIPYTITASVNGPGLGLINWW 198 MFVL+ +K VR+P+ + + + A+ EE+N K +NKVVL+VGL + L+DI++ G+SF+ PGD HT V+FR +VFRPFME+I+ G+IK+C K+ VQ+SLGFF++I++ E+LQ RFDE +Q WVWEY +ED GKHDLFMD GEEIRF+V ++ F+DT+P N AP + S +P +++++ Y I AS+N GLGL++WW Sbjct: 1 MFVLALVKQTVRVPSEKFNRDIDQAISEELNLKFANKVVLDVGLCIALWDIIKRGESFILPGDSGHHTKVEFRYVVFRPFMEQILVGRIKNCDKESVQVSLGFFDEIFISSENLQKNSRFDETEQTWVWEYQSED-GKHDLFMDTGEEIRFKVVAEYFADTTPSGPSNEAP-DSSLDPIRDNKRMAYRINASINESGLGLLSWW 202
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: gb|KFM81263.1| (DNA-directed RNA polymerase III subunit RPC8, partial [Stegodyphus mimosarum]) HSP 1 Score: 212.616 bits (540), Expect = 1.260e-69 Identity = 101/201 (50.25%), Postives = 142/201 (70.65%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGK-HDLFMDPGEEIRFRVTSQSFSD-TSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWN 199 MF L E+K VR+ + K L DA+ +E+ K +NKVV+NVGL + LF+I ++ +S++FPGDGASHT V F +VFRPFM EI+ GKI+SCS++GV +S+GFF+DI +P + LQ+P RFDE +Q+WVW + E+ G+ HDLFMD E IRFRV ++F D T + +E +IPY +T S+N PGLGL++WW+ Sbjct: 1 MFTLVEMKDTVRIRPWRFHKPLQDAIADELRLKFANKVVMNVGLCIALFEITKLEESYIFPGDGASHTGVYFSYIVFRPFMNEILVGKIRSCSREGVHVSIGFFDDILIPQDVLQHPSRFDEKEQLWVWVFSNEESGQTHDLFMDRDEPIRFRVIDETFVDTTPTSPETETSDAEEKDRRIPYNLTGSINEPGLGLLSWWS 201
BLAST of EMLSAG00000000471 vs. nr
Match: gi|700386367|ref|XP_009933279.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1 [Opisthocomus hoazin] >gi|677550588|gb|KFR11024.1| DNA-directed RNA polymerase III subunit RPC8 [Opisthocomus hoazin]) HSP 1 Score: 251.521 bits (641), Expect = 3.287e-82 Identity = 115/205 (56.10%), Postives = 156/205 (76.10%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNS------EKIPYTITASVNGPGLGLINWWN 199 MFVL E+ VR+P Q + L +++ EE+N+K++NKVV NVGL +CL+DI ++ DS++FPGDGASHT V FR +VF PF++EI+ G+IKSCS+DGV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV ++F DTSP + E+S N+ ++ PYT+ S++ PGLGL++WW Sbjct: 1 MFVLVEMTDTVRIPPWQFERKLNESIAEELNKKLANKVVYNVGLCICLYDITKLEDSYIFPGDGASHTKVHFRYVVFHPFLDEILIGQIKSCSQDGVHVSLGFFDDIVIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDETFVDTSPTGPSSAEASTSNATEEVQKKEAPYTLVGSISEPGLGLLSWWT 204
BLAST of EMLSAG00000000471 vs. nr
Match: gi|554553917|ref|XP_005871425.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Myotis brandtii] >gi|554553919|ref|XP_005871426.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Myotis brandtii]) HSP 1 Score: 251.521 bits (641), Expect = 4.085e-82 Identity = 120/206 (58.25%), Postives = 155/206 (75.24%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSP------NVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFFEDI +PPESLQ P +FD+A+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP VA T E EP ++ PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFEDILIPPESLQQPAKFDDAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPTGPSSAQVASTSE--EPPKKEAPYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. nr
Match: gi|698469002|ref|XP_009705606.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1 [Cariama cristata] >gi|677253236|gb|KFP60170.1| DNA-directed RNA polymerase III subunit RPC8 [Cariama cristata]) HSP 1 Score: 251.521 bits (641), Expect = 4.224e-82 Identity = 114/204 (55.88%), Postives = 156/204 (76.47%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKI-----PYTITASVNGPGLGLINWWN 199 MFVL E+ VR+P Q + L +++ EE+N+K++NKVV NVGL +CL+DI ++ DS++FPGDGASHT V FR +VF PF++EI+ G+IKSCS+DGV +S+GFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV ++F DTSP + E+S N+ ++ PYT+ S++ PGLGL++WW Sbjct: 1 MFVLVEMTDTVRIPPWQFERKLNESIAEELNKKLANKVVYNVGLCICLYDITKLEDSYIFPGDGASHTKVHFRYVVFHPFLDEILIGQIKSCSQDGVHVSIGFFDDIVIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDIGEEIRFRVVDETFVDTSPTGPSSAEASTSNATEVQKKEAPYTLVGSISEPGLGLLSWWT 203
BLAST of EMLSAG00000000471 vs. nr
Match: gi|961005491|ref|XP_014818700.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Calidris pugnax] >gi|961005493|ref|XP_014818701.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Calidris pugnax]) HSP 1 Score: 251.136 bits (640), Expect = 4.564e-82 Identity = 115/205 (56.10%), Postives = 156/205 (76.10%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNS------EKIPYTITASVNGPGLGLINWWN 199 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CL+DI ++ DS++FPGDGASHT V FR +VF PF++EI+ G+IKSCS+DGV +S+GFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV ++F DTSP + E+S N+ ++ PYT+ S++ PGLGL++WW Sbjct: 1 MFVLVEMTDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLYDITKLEDSYIFPGDGASHTKVHFRYVVFHPFLDEILIGQIKSCSQDGVHVSIGFFDDIVIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDIGEEIRFRVVDETFIDTSPTGPSSAEASTSNATEEVQKKEAPYTLVGSISEPGLGLLSWWT 204
BLAST of EMLSAG00000000471 vs. nr
Match: gi|556997097|ref|XP_006002017.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Latimeria chalumnae]) HSP 1 Score: 251.136 bits (640), Expect = 4.759e-82 Identity = 117/202 (57.92%), Postives = 154/202 (76.24%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESS---EPNSEKIPYTITASVNGPGLGLINWWN 199 MFVL E+ VR+P Q + L DA+ EE+N+K++NKVV N+GL +CL+DI ++ DS++FPGDGASHT V FR +VFRPF++EI+ GKIK CS DGVQ+SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD E+IRFRV SF DTSP ++E+S E ++ PYT+ S++ PGLGL++WW Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDAIAEELNKKLANKVVYNIGLCICLYDITKLEDSYIFPGDGASHTKVHFRYVVFRPFLDEILIGKIKGCSADGVQVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDSEEDIRFRVVFDSFIDTSPTGPSSDEASTSEEGQKKEAPYTLIGSISEPGLGLLSWWT 201
BLAST of EMLSAG00000000471 vs. nr
Match: gi|557290219|ref|XP_006027718.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Alligator sinensis] >gi|557290221|ref|XP_006027719.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Alligator sinensis]) HSP 1 Score: 251.136 bits (640), Expect = 5.033e-82 Identity = 116/204 (56.86%), Postives = 155/204 (75.98%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESS-----EPNSEKIPYTITASVNGPGLGLINWWN 199 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CL+DI+++ DS++FPGDGASHT V FR +VF PF++EI+ G IKSCS+DGV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV ++F DTSP + E+S E ++ PYT+ S++ PGLGL++WW Sbjct: 1 MFVLVEMTDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLYDIIKLEDSYIFPGDGASHTKVHFRYVVFHPFLDEILIGNIKSCSQDGVHVSLGFFDDIIIPPESLQQPTKFDEAEQVWVWEYETEEGA-HDLYMDIGEEIRFRVVDETFVDTSPTGPSSAETSTSGATEEVQKEAPYTLVGSISEPGLGLLSWWT 203
BLAST of EMLSAG00000000471 vs. nr
Match: gi|984130810|ref|XP_015357348.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1 [Marmota marmota marmota]) HSP 1 Score: 251.136 bits (640), Expect = 5.489e-82 Identity = 117/204 (57.35%), Postives = 154/204 (75.49%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSE----KIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP + E++ N E + PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPTGPSSAEATSSNEELPKKEAPYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. nr
Match: gi|584063262|ref|XP_006776027.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Myotis davidii]) HSP 1 Score: 251.136 bits (640), Expect = 5.673e-82 Identity = 120/206 (58.25%), Postives = 155/206 (75.24%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPN------VAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFFEDI +PPESLQ P +FD+A+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP VA T E EP ++ PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFEDILIPPESLQQPAKFDDAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPTGPSSAGVASTSE--EPPKKEAPYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. nr
Match: gi|1011591817|gb|KYO36244.1| (DNA-directed RNA polymerase III subunit RPC8 [Alligator mississippiensis]) HSP 1 Score: 251.521 bits (641), Expect = 5.983e-82 Identity = 116/205 (56.59%), Postives = 154/205 (75.12%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESS------EPNSEKIPYTITASVNGPGLGLINWWN 199 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CL+DI ++ DS++FPGDGASHT V FR +VF PF++EI+ G IKSCS+DGV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV ++F DTSP + E+S E ++ PYT+ S++ PGLGL++WW Sbjct: 17 MFVLVEMTDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLYDITKLEDSYIFPGDGASHTKVHFRYVVFHPFLDEILIGNIKSCSQDGVHVSLGFFDDIIIPPESLQQPTKFDEAEQVWVWEYETEEGA-HDLYMDIGEEIRFRVVDETFVDTSPTGPSSAETSTSGATEEVQKKEAPYTLVGSISEPGLGLLSWWT 220
BLAST of EMLSAG00000000471 vs. nr
Match: gi|224095057|ref|XP_002197392.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Taeniopygia guttata] >gi|542160020|ref|XP_005488735.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Zonotrichia albicollis]) HSP 1 Score: 250.751 bits (639), Expect = 6.693e-82 Identity = 115/205 (56.10%), Postives = 156/205 (76.10%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNS------EKIPYTITASVNGPGLGLINWWN 199 MFVL E+ VR+P Q + L +++ EE+N+K++NKVV NVGL +CL+DI ++ DS++FPGDGASHT V FR +VF PF++EI+ G+IKSCS+DGV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV ++F DTSP + E+S N+ ++ PYT+ S++ PGLGL++WW Sbjct: 1 MFVLVEMTDTVRIPPWQFERKLNESIAEELNKKLANKVVYNVGLCICLYDITKLEDSYIFPGDGASHTKVHFRYVVFHPFLDEILIGQIKSCSQDGVHVSLGFFDDIVIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDIGEEIRFRVVDETFVDTSPTGPSSAEASTSNAAEEVQKKEAPYTLVGSISEPGLGLLSWWT 204
BLAST of EMLSAG00000000471 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold50_size457468-processed-gene-0.1 (protein:Tk03198 transcript:snap_masked-scaffold50_size457468-processed-gene-0.1-mRNA-1 annotation:"dna-directed rna polymerase iii subunit rpc8") HSP 1 Score: 202.986 bits (515), Expect = 2.269e-65 Identity = 108/232 (46.55%), Postives = 145/232 (62.50%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDA----------------------------------LREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGD--GASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNV---------APTEESSEPNSEKIPYTITASV 187 MF+LS L SLVR+ S+ + LP+A L + +N +++NKVV +GL + ++D++ IGDS++ P D GASHT V FR++VFRPF+EE++ GKIKSC++ GV +SLGFF+DI + PE+LQ+P RFDE +QVWVWEYPT D G HD+FMDPGE IRFRV S+ F DTSP+ A + SEP +KIPY + ASV Sbjct: 1 MFILSRLSSLVRIVPSEWKRPLPEAPSDGDGRGQVRPEAEDRSLEAQALTPRADLMRWALTDALNVQLANKVVFELGLVLSVYDLVSIGDSYLLPMDLEGASHTRVTFRVVVFRPFVEEVLQGKIKSCTRQGVFVSLGFFDDILIKPEALQHPKRFDETEQVWVWEYPT-DEGHHDMFMDPGETIRFRVISEHFVDTSPSAPDLHPKDPSAALAQGSEPEDKKIPYLLHASV 231 HSP 2 Score: 103.99 bits (258), Expect = 3.632e-27 Identity = 54/99 (54.55%), Postives = 64/99 (64.65%), Query Frame = 0 Query: 111 PESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNV---------APTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 PE + PY + VWVWEYPT D G HD+FMDPGE IRFRV S+ F DTSP+ A + SEP +KIPY + ASVN PGLGLI+WWN+ Sbjct: 218 PEDKKIPYLLHAS--VWVWEYPT-DEGHHDMFMDPGETIRFRVISEHFVDTSPSAPDLHPKDPSAALAQGSEPEDKKIPYLLHASVNEPGLGLISWWNS 313 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000471 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000000471 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 6
BLAST of EMLSAG00000000471 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000471 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 10
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 9
BLAST of EMLSAG00000000471 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000471 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s106:813843..814445+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000471-683237 ID=EMLSAG00000000471-683237|Name=EMLSAG00000000471|organism=Lepeophtheirus salmonis|type=gene|length=603bp|location=Sequence derived from alignment at LSalAtl2s106:813843..814445+ (Lepeophtheirus salmonis)back to top Add to Basket
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