EMLSAG00000000471, EMLSAG00000000471-683237 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:rpc-25 species:6239 "Caenorhabditis elegans" [GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia development" evidence=IMP] [GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis" evidence=IMP] [GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell migration" evidence=IMP] InterPro:IPR005576 Pfam:PF03876 GO:GO:0006351 InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316 GO:GO:0003899 EMBL:Z70783 eggNOG:COG1095 Gene3D:3.30.1490.120 SUPFAM:SSF88798 HOGENOM:HOG000157370 KO:K03022 InterPro:IPR013238 Pfam:PF08292 OMA:NVGLCIA OrthoDB:EOG70CR7V GeneTree:ENSGT00390000004383 PIR:T28049 RefSeq:NP_505625.1 UniGene:Cel.1266 ProteinModelPortal:Q23645 SMR:Q23645 STRING:6239.ZK856.10 PaxDb:Q23645 PRIDE:Q23645 EnsemblMetazoa:ZK856.10 GeneID:179418 KEGG:cel:CELE_ZK856.10 UCSC:ZK856.10 CTD:179418 WormBase:ZK856.10 InParanoid:Q23645 NextBio:905302 PRO:PR:Q23645 Uniprot:Q23645) HSP 1 Score: 173.326 bits (438), Expect = 6.836e-52 Identity = 81/199 (40.70%), Postives = 123/199 (61.81%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGG-KHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWW 198 MF+LS L V + QL +++ +N +++NK++ ++GL +C++DI EIGDS++ PG+G V+FR++VFRPF++E+I K+ S+ G+ +++ FFEDI+VP E L P+ F+E QVW WEY EDG L+MDPG+ +RFRVT F D P + E +E + E I ++ GLG I WW Sbjct: 1 MFILSLLHDTVAIQPHQLSSDQQIVIKKRLNERLANKIIPDLGLCICVYDINEIGDSYILPGEGDCRARVKFRMIVFRPFVDEVIEAKVIGSSRQGLCLTIQFFEDIFVPAEKLPEPHVFEEEGQVWYWEYAQEDGEPPAKLYMDPGKIVRFRVTEIIFKDLKPELTHEERKTEKSME-----IKGTMASTGLGCIGWW 194
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:rpc-25 "Protein RPC-25" species:6239 "Caenorhabditis elegans" [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IBA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IBA] [GO:0001056 "RNA polymerase III activity" evidence=IBA] InterPro:IPR005576 Pfam:PF03876 GO:GO:0006351 InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316 GO:GO:0003899 EMBL:Z70783 eggNOG:COG1095 Gene3D:3.30.1490.120 SUPFAM:SSF88798 HOGENOM:HOG000157370 KO:K03022 InterPro:IPR013238 Pfam:PF08292 OMA:NVGLCIA OrthoDB:EOG70CR7V GeneTree:ENSGT00390000004383 PIR:T28049 RefSeq:NP_505625.1 UniGene:Cel.1266 ProteinModelPortal:Q23645 SMR:Q23645 STRING:6239.ZK856.10 PaxDb:Q23645 PRIDE:Q23645 EnsemblMetazoa:ZK856.10 GeneID:179418 KEGG:cel:CELE_ZK856.10 UCSC:ZK856.10 CTD:179418 WormBase:ZK856.10 InParanoid:Q23645 NextBio:905302 PRO:PR:Q23645 Uniprot:Q23645) HSP 1 Score: 173.326 bits (438), Expect = 6.836e-52 Identity = 81/199 (40.70%), Postives = 123/199 (61.81%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGG-KHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWW 198 MF+LS L V + QL +++ +N +++NK++ ++GL +C++DI EIGDS++ PG+G V+FR++VFRPF++E+I K+ S+ G+ +++ FFEDI+VP E L P+ F+E QVW WEY EDG L+MDPG+ +RFRVT F D P + E +E + E I ++ GLG I WW Sbjct: 1 MFILSLLHDTVAIQPHQLSSDQQIVIKKRLNERLANKIIPDLGLCICVYDINEIGDSYILPGEGDCRARVKFRMIVFRPFVDEVIEAKVIGSSRQGLCLTIQFFEDIFVPAEKLPEPHVFEEEGQVWYWEYAQEDGEPPAKLYMDPGKIVRFRVTEIIFKDLKPELTHEERKTEKSME-----IKGTMASTGLGCIGWW 194
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:rpc25 "DNA-directed RNA polymerase III complex subunit Rpc25" species:4896 "Schizosaccharomyces pombe" [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IDA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IMP] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR004519 InterPro:IPR005576 Pfam:PF03876 PomBase:SPBC2G5.07c GO:GO:0005829 GO:GO:0003677 EMBL:CU329671 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0005666 GO:GO:0003899 eggNOG:COG1095 Gene3D:3.30.1490.120 SUPFAM:SSF88798 OrthoDB:EOG7X0VTZ GO:GO:0006384 HOGENOM:HOG000157370 KO:K03022 InterPro:IPR013238 Pfam:PF08292 TIGRFAMs:TIGR00448 OMA:NVGLCIA EMBL:DQ156221 PIR:T40164 RefSeq:NP_596068.1 PDB:3AYH PDBsum:3AYH ProteinModelPortal:O94285 BioGrid:277038 MINT:MINT-4682876 STRING:4896.SPBC2G5.07c-1 EnsemblFungi:SPBC2G5.07c.1 GeneID:2540510 KEGG:spo:SPBC2G5.07c NextBio:20801637 PRO:PR:O94285 Uniprot:O94285) HSP 1 Score: 171.014 bits (432), Expect = 1.727e-51 Identity = 83/203 (40.89%), Postives = 131/203 (64.53%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGK-HDLFMDPGEEIRFRVTSQSFSDTSPNV---APTEESSEPNSEKIPYTITASVNGPGLGLINWWN 199 MF+LS ++ + S K +AL EEI++K +NKV+ N+GLA+C++D L+IG+ + GDG+S+ +V FRL++FRPF E++ GKIKSCS++G+++++ FF+DI++P + L +P F ++ WVW+ EDG + +L+ D EEIRF++ S+ F D SP A +E PYT+ AS + GLG+ WW Sbjct: 1 MFLLSRFSDIISIHPSNFWKPTKEALAEEIHKKYANKVIQNIGLAICVYDFLKIGEGIIKYGDGSSYMNVVFRLIIFRPFRGEVMLGKIKSCSEEGIRVTISFFDDIFIPKDMLFDPCVFRPDERAWVWKIEGEDGSEGTELYFDIDEEIRFQIESEDFVDISPKRNKNATAITGTEALESVSPYTLIASCSRDGLGIPAWWK 203
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:orf19.443 species:5476 "Candida albicans" [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0001056 "RNA polymerase III activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IEA] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IEA] [GO:0042797 "tRNA transcription from RNA polymerase III promoter" evidence=IEA] InterPro:IPR004519 InterPro:IPR005576 Pfam:PF03876 CGD:CAL0005692 GO:GO:0003677 GO:GO:0006351 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0003899 EMBL:AACQ01000078 EMBL:AACQ01000077 eggNOG:COG1095 Gene3D:3.30.1490.120 SUPFAM:SSF88798 OrthoDB:EOG7X0VTZ HOGENOM:HOG000157370 KO:K03022 InterPro:IPR013238 Pfam:PF08292 TIGRFAMs:TIGR00448 RefSeq:XP_715878.1 RefSeq:XP_715928.1 ProteinModelPortal:Q5A298 SMR:Q5A298 STRING:5476.CAL0005692 GeneID:3642414 GeneID:3642463 KEGG:cal:CaO19.443 KEGG:cal:CaO19.8073 Uniprot:Q5A298) HSP 1 Score: 160.614 bits (405), Expect = 1.621e-47 Identity = 70/200 (35.00%), Postives = 127/200 (63.50%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKI-PYTITASVNGPGLGLINWWN 199 MF+LSE+ L+R+P S + ++ +E+N+K +NK++ N+GL + ++DIL+I D + PGDG S+ V+FR +V++PF EI+ G + C+ G+++ + FF++IW+P + L ++ E++Q W++ +++LF+D E+IRFRV ++F + P + + E + + PYTITAS G+G ++WW+ Sbjct: 1 MFILSEISDLIRIPPSAFNVPIQHSISDELNKKYANKIIANLGLVITIWDILDIKDGLLKPGDGGSYVEVRFRSIVWKPFRGEILTGWVTECTAKGIKVRMEFFDEIWIPKDFLFENCKYSESEQAWIYLL-----DENELFIDVNEKIRFRVEEENFYNVKPKLEDEQTEEEKKATTLPPYTITASCQDYGMGCVSWWD 195
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:CPAR2_107870 species:5480 "Candida parapsilosis" [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0001056 "RNA polymerase III activity" evidence=IEA] [GO:0042797 "tRNA transcription from RNA polymerase III promoter" evidence=IEA] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR004519 InterPro:IPR005576 Pfam:PF03876 GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0003899 Gene3D:3.30.1490.120 SUPFAM:SSF88798 OrthoDB:EOG7X0VTZ InterPro:IPR013238 Pfam:PF08292 TIGRFAMs:TIGR00448 EMBL:HE605203 Uniprot:G8B8G7) HSP 1 Score: 156.377 bits (394), Expect = 7.985e-46 Identity = 72/200 (36.00%), Postives = 120/200 (60.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKI-PYTITASVNGPGLGLINWWN 199 MF+LSE+ L+R+P + A+ +E+N+K +NKVV +G+ + ++D+L+I D + PGDG S+ V+FR +VF+PF+ E++ G + C G+++ L FF+DIW+P + L F E++ WVW + +LF+D E+IRF+V + F + P + E + K+ PY+I AS GLG ++WW+ Sbjct: 1 MFILSEINDLIRIPPHTFNIPIQHAITDELNKKYANKVVPKLGVVITIWDLLDIKDGLLKPGDGGSYVEVRFRCIVFKPFVGEVLTGWVTECKATGIKVRLEFFDDIWIPADYLFEDCEFKESESAWVW-----NSADTELFIDVDEKIRFKVEKEVFYNVKPKSSNEAIGIEEPANKVPPYSIIASCQLSGLGCVSWWD 195
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:An16g08710 species:5061 "Aspergillus niger" [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0001056 "RNA polymerase III activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IEA] [GO:0042797 "tRNA transcription from RNA polymerase III promoter" evidence=IEA] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IEA] InterPro:IPR005576 Pfam:PF03876 GO:GO:0006351 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0003899 Gene3D:3.30.1490.120 SUPFAM:SSF88798 OrthoDB:EOG7X0VTZ HOGENOM:HOG000157370 KO:K03022 InterPro:IPR013238 Pfam:PF08292 EMBL:AM270380 RefSeq:XP_001398169.1 ProteinModelPortal:A2R8X7 STRING:5061.CADANGAP00013087 EnsemblFungi:CADANGAT00013335 GeneID:4989262 KEGG:ang:ANI_1_1170144 Uniprot:A2R8X7) HSP 1 Score: 155.992 bits (393), Expect = 1.042e-45 Identity = 81/198 (40.91%), Postives = 118/198 (59.60%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWW 198 MF+L+ + L+++ K AL + IN K +NKV+ +GL + +D+LE D + G G + +V+FRL+VFRPF EI+ GKI S ++ G+++++ FF DI VPP+ L + RFD ADQVW+WE EDG + D GE +RFRV + + D PN AP + K PY+I S+ GLG I+WW Sbjct: 1 MFILTTVSDLIQISPEDFSKYSAVALEDNINEKYANKVIQKIGLCIGFYDLLESSDGLIGHGTGLVNVNVKFRLIVFRPFKGEIMLGKISSATEHGIKVAVEFFNDILVPPDLLLDGARFDYADQVWIWE--NEDGST--FYFDVGEVVRFRVEMEEWHDQIPN-APDLGDAAAIERKPPYSIIGSMQMAGLGPISWW 193
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:AO090103000052 species:5062 "Aspergillus oryzae" [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0001056 "RNA polymerase III activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IEA] [GO:0042797 "tRNA transcription from RNA polymerase III promoter" evidence=IEA] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IEA] InterPro:IPR005576 Pfam:PF03876 GO:GO:0006351 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AP007174 GO:GO:0003899 Gene3D:3.30.1490.120 SUPFAM:SSF88798 OrthoDB:EOG7X0VTZ HOGENOM:HOG000157370 KO:K03022 InterPro:IPR013238 Pfam:PF08292 OMA:NVGLCIA RefSeq:XP_001826668.1 ProteinModelPortal:Q2TYY8 STRING:5062.CADAORAP00009780 EnsemblFungi:CADAORAT00009983 GeneID:5998790 KEGG:aor:AOR_1_108034 Uniprot:Q2TYY8) HSP 1 Score: 155.221 bits (391), Expect = 2.231e-45 Identity = 83/198 (41.92%), Postives = 116/198 (58.59%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWW 198 MF+L+ L L+++ K A+ + IN K +NKV+ VGL + +D+LE D + G G + +V+FRL+VFRPF EI+ GKI S ++ G++I + FF DI VPP L + RFD ADQVW+WE EDG + D GE +RFRV + + D PN AP + K PY+I S+ GLG I+WW Sbjct: 1 MFILTTLSDLIQISPEDFSKYSSVAIEDNINEKYANKVIQKVGLCIGFYDLLESSDGLIGHGTGLVNVNVKFRLIVFRPFKGEIMLGKISSATEHGIKIGVEFFNDILVPPNLLLDGARFDYADQVWIWE--NEDGST--FYFDIGEVVRFRVEIEEWHDQIPN-APDLGDAAAIERKPPYSIIGSMQMAGLGPISWW 193
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:CAGL0J00869g species:5478 "Candida glabrata" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0001056 "RNA polymerase III activity" evidence=IEA] [GO:0042797 "tRNA transcription from RNA polymerase III promoter" evidence=IEA] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IEA] InterPro:IPR004519 InterPro:IPR005576 Pfam:PF03876 GO:GO:0003677 GO:GO:0006351 EMBL:CR380956 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0003899 Gene3D:3.30.1490.120 SUPFAM:SSF88798 OrthoDB:EOG7X0VTZ HOGENOM:HOG000157370 KO:K03022 InterPro:IPR013238 Pfam:PF08292 TIGRFAMs:TIGR00448 OMA:NVGLCIA RefSeq:XP_447750.1 ProteinModelPortal:Q6FPU4 SMR:Q6FPU4 GeneID:2889871 KEGG:cgr:CAGL0J00869g Uniprot:Q6FPU4) HSP 1 Score: 141.739 bits (356), Expect = 6.498e-40 Identity = 82/220 (37.27%), Postives = 122/220 (55.45%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQIS-LGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSP-------------------NVAPTEESSEPNSEKIP-YTITASVNGPGLGLINWWN 199 MF+L++LK LVR+P Q + A+ E+N K SNKVV +VGL+V ++D+LE+ + + PGDGAS+ +V FR +VF+PF EI+ G IK C +G+Q+S +G F+DI++P + L + D WVW P ++ K L++D E IRFRV + F D P + E EK P Y + S G+GL++WW+ Sbjct: 1 MFILTKLKDLVRIPPDQFHRDAVSAITHELNVKYSNKVVPHVGLSVSVYDLLEVDEGQLRPGDGASYINVTFRCVVFKPFAGEILTGWIKRCDGEGIQVSMMGLFDDIFIPKKMLFEGSYYSPEDGAWVW--PMDEETK--LYLDVNEMIRFRVEEEVFVDVKPPSPKELELERERELQLQEQQEHQQHQQQESKLEKPPAYALLGSCQTDGMGLVSWWD 216
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:RPC25 "RNA polymerase III subunit C25" species:559292 "Saccharomyces cerevisiae S288c" [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IMP] [GO:0042797 "tRNA transcription from RNA polymerase III promoter" evidence=IMP;IDA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001056 "RNA polymerase III activity" evidence=IDA] Reactome:REACT_98256 InterPro:IPR004519 InterPro:IPR005576 Pfam:PF03876 SGD:S000001627 GO:GO:0003677 EMBL:BK006944 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0005666 GO:GO:0003899 EMBL:Z25464 eggNOG:COG1095 Gene3D:3.30.1490.120 SUPFAM:SSF88798 Reactome:REACT_87991 GO:GO:0042797 OrthoDB:EOG7X0VTZ GO:GO:0006384 HOGENOM:HOG000157370 KO:K03022 InterPro:IPR013238 Pfam:PF08292 TIGRFAMs:TIGR00448 OMA:NVGLCIA GeneTree:ENSGT00390000004383 EMBL:U11048 EMBL:Z28144 PIR:S37973 RefSeq:NP_012778.1 PDB:2CKZ PDBsum:2CKZ ProteinModelPortal:P35718 SMR:P35718 BioGrid:33992 DIP:DIP-1414N IntAct:P35718 MINT:MINT-399757 STRING:4932.YKL144C PaxDb:P35718 EnsemblFungi:YKL144C GeneID:853713 KEGG:sce:YKL144C CYGD:YKL144c BioCyc:YEAST:G3O-31919-MONOMER EvolutionaryTrace:P35718 NextBio:974722 PRO:PR:P35718 Genevestigator:P35718 Uniprot:P35718) HSP 1 Score: 140.584 bits (353), Expect = 1.480e-39 Identity = 73/215 (33.95%), Postives = 120/215 (55.81%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQIS-LGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSE---------------PNSEKIP-YTITASVNGPGLGLINWW 198 MF+LS++ LVR+P Q + A+ ++N K +NK++ NVGL + ++D+L + + + PGDG+S+ +V FR +VF+PF+ EI+ G I C+ +G+++S LG F+DI++P L + + W+W P ++ K L+ D E+IRFR+ + F D P E E P +EK P Y + S G+GL++WW Sbjct: 1 MFILSKIADLVRIPPDQFHRDTISAITHQLNNKFANKIIPNVGLCITIYDLLTVEEGQLKPGDGSSYINVTFRAVVFKPFLGEIVTGWISKCTAEGIKVSLLGIFDDIFIPQNMLFEGCYYTPEESAWIW--PMDEETK--LYFDVNEKIRFRIEREVFVDVKPKSPKERELEERAQLENEIEGKNEETPQNEKPPAYALLGSCQTDGMGLVSWW 211
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:AN1447 species:162425 "Aspergillus nidulans" [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0001056 "RNA polymerase III activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=IEA] [GO:0042797 "tRNA transcription from RNA polymerase III promoter" evidence=IEA] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=IEA] InterPro:IPR005576 Pfam:PF03876 EMBL:BN001307 GO:GO:0006351 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AACD01000022 GO:GO:0003899 eggNOG:COG1095 Gene3D:3.30.1490.120 SUPFAM:SSF88798 OrthoDB:EOG7X0VTZ HOGENOM:HOG000157370 KO:K03022 InterPro:IPR013238 Pfam:PF08292 OMA:VESISYP RefSeq:XP_659051.1 ProteinModelPortal:Q5BDD3 STRING:162425.CADANIAP00008060 EnsemblFungi:CADANIAT00008060 GeneID:2875482 KEGG:ani:AN1447.2 Uniprot:Q5BDD3) HSP 1 Score: 139.428 bits (350), Expect = 3.710e-39 Identity = 73/183 (39.89%), Postives = 108/183 (59.02%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTI 183 MF+L+ + L+++ K A+ + IN K +NKV+ +GL + +D+LE D + G G + +V+FRL+VFRPF EI+ GKI S +++G++I + FF DI VPP+ L + RFD DQVW+WE E+G + D GE +RFRV + + D PN AP P K PY+I Sbjct: 1 MFILTTISDLIQISPEDFSKYSSVAIEDNINEKYANKVIQKIGLCIGFYDLLESSDGLIGHGTGLVNVNVKFRLIVFRPFRGEIVLGKISSATENGIKIGVEFFNDILVPPDLLLDGARFDYQDQVWIWE--NEEG---TFYFDVGEVVRFRVEMEEWHDQIPN-APDLGDGAPIDRKPPYSI 177
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592860033|gb|GAXK01097529.1| (TSA: Calanus finmarchicus comp38167_c0_seq1 transcribed RNA sequence) HSP 1 Score: 265.003 bits (676), Expect = 6.416e-88 Identity = 120/200 (60.00%), Postives = 156/200 (78.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVLSE+++L+RL KSL D L +EINRK++NKV++NVGL + L DILE+G+SF+FPGDGASHT V+FR+LVFRP MEE++ GKIKSCSK+GV +SL FF+DI +P ESLQ+P RFDE + VWVWEYP E+G HDLFMDPGE+IR RV S+ F DT P ES + ++ PY++ ++N PGLGL++WWN+ Sbjct: 147 MFVLSEIRTLIRLLPRGFDKSLEDQLTDEINRKLANKVMINVGLCLSLHDILEVGESFLFPGDGASHTKVRFRMLVFRPQMEEVLTGKIKSCSKEGVHVSLEFFDDILIPAESLQHPSRFDETESVWVWEYPVEEGEHHDLFMDPGEKIRMRVVSEQFVDTGPTKPKITESEQEEAKTPPYSLVGTINEPGLGLLSWWNS 746
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592890126|gb|GAXK01068249.1| (TSA: Calanus finmarchicus comp17989_c0_seq1 transcribed RNA sequence) HSP 1 Score: 43.5134 bits (101), Expect = 1.692e-4 Identity = 32/154 (20.78%), Postives = 64/154 (41.56%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVT 154 MF L + L G L D +++++ +V G + + I +G + PG G V+++ +VFRPF E+++ + +K G+ +G ++ S+ FD ++ E D+ + +EIR ++ Sbjct: 175 MFYHISLDHEIMLHPRYFGPQLMDTVKQKLFTEVEGTCTGKYGFVIAVTTIDCVGAGLIQPGQGFVLYPVKYKAIVFRPFKGEVLDAVVTQVNKVGLFTEIGPLS-CFISRHSIPADMSFDPNSNPPCYKTSDE-----DMVIQQDDEIRLKIV 618
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592799496|gb|GAXK01155072.1| (TSA: Calanus finmarchicus comp1485599_c0_seq1 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 1.080e+0 Identity = 20/71 (28.17%), Postives = 33/71 (46.48%), Query Frame = 0 Query: 86 NGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQ 156 NG I + + ++G +DI SLQ +D + + E PT D K ++ P + RFR +S+ Sbjct: 1428 NGLISTPQEQETVDTIGVTDDIIPAISSLQTKETWDNIGETIIGEIPTRDLPKVEILEQPCQSYRFRYSSE 1640
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592799495|gb|GAXK01155073.1| (TSA: Calanus finmarchicus comp1485599_c0_seq2 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 1.108e+0 Identity = 20/71 (28.17%), Postives = 33/71 (46.48%), Query Frame = 0 Query: 86 NGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQ 156 NG I + + ++G +DI SLQ +D + + E PT D K ++ P + RFR +S+ Sbjct: 1402 NGLISTPQEQETVDTIGVTDDIIPAISSLQTKETWDNIGETIIGEIPTRDLPKVEILEQPCQSYRFRYSSE 1614
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592779557|gb|GAXK01175011.1| (TSA: Calanus finmarchicus comp1118069_c0_seq3 transcribed RNA sequence) HSP 1 Score: 29.261 bits (64), Expect = 5.152e+0 Identity = 10/30 (33.33%), Postives = 22/30 (73.33%), Query Frame = 0 Query: 71 QFRLLVFRPFMEEIINGKIKSCSKDGVQIS 100 +F++ F+ ++ I++GKI C KDG++++ Sbjct: 221 EFKMTEFQSMLDFILDGKIDYCEKDGMKLA 310
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592779559|gb|GAXK01175009.1| (TSA: Calanus finmarchicus comp1118069_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 7.061e+0 Identity = 10/31 (32.26%), Postives = 22/31 (70.97%), Query Frame = 0 Query: 70 VQFRLLVFRPFMEEIINGKIKSCSKDGVQIS 100 +F++ F+ ++ I++GKI C KDG++++ Sbjct: 218 TEFKMTEFQSMLDFILDGKIDYCEKDGMKLA 310
BLAST of EMLSAG00000000471 vs. L. salmonis peptides
Match: EMLSAP00000000471 (pep:novel supercontig:LSalAtl2s:LSalAtl2s106:813843:814445:1 gene:EMLSAG00000000471 transcript:EMLSAT00000000471 description:"augustus_masked-LSalAtl2s106-processed-gene-8.4") HSP 1 Score: 410.223 bits (1053), Expect = 5.865e-147 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT Sbjct: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|29428071|sp|Q9Y535.1|RPC8_HUMAN (RecName: Full=DNA-directed RNA polymerase III subunit RPC8; Short=RNA polymerase III subunit C8; AltName: Full=DNA-directed RNA polymerase III subunit H; AltName: Full=RNA polymerase III subunit 22.9 kDa subunit; Short=RPC22.9) HSP 1 Score: 249.21 bits (635), Expect = 1.423e-83 Identity = 117/205 (57.07%), Postives = 155/205 (75.61%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKI-----PYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP P+ + +SE++ PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRCVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPT-GPSSADATTSSEELPKKEAPYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|29427995|sp|Q9D2C6.2|RPC8_MOUSE (RecName: Full=DNA-directed RNA polymerase III subunit RPC8; AltName: Full=DNA-directed RNA polymerase III subunit H; AltName: Full=RNA polymerase III subunit C7) HSP 1 Score: 242.276 bits (617), Expect = 6.729e-81 Identity = 117/205 (57.07%), Postives = 151/205 (73.66%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPN-----VAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP A + P E PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPTGPSSAEAASSSEELPKKEA-PYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|122136999|sp|Q2T9X1.1|RPC8_BOVIN (RecName: Full=DNA-directed RNA polymerase III subunit RPC8; Short=RNA polymerase III subunit C8; AltName: Full=DNA-directed RNA polymerase III subunit 22.9 kDa polypeptide; AltName: Full=DNA-directed RNA polymerase III subunit H) HSP 1 Score: 239.58 bits (610), Expect = 7.711e-80 Identity = 115/205 (56.10%), Postives = 151/205 (73.66%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPN-----VAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKV+ NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEE+RFRV +SF DTSP A + P E PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIDEELNKKLANKVMYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDIGEEVRFRVVDESFVDTSPTGPSSAEAASSSEELPKKEA-PYTLMGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|74582844|sp|O94285.1|RPC8_SCHPO (RecName: Full=DNA-directed RNA polymerase III subunit rpc8; Short=RNA polymerase III subunit C8; AltName: Full=RNA polymerase III subunit C25) HSP 1 Score: 171.014 bits (432), Expect = 6.569e-53 Identity = 83/203 (40.89%), Postives = 131/203 (64.53%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGK-HDLFMDPGEEIRFRVTSQSFSDTSPNV---APTEESSEPNSEKIPYTITASVNGPGLGLINWWN 199 MF+LS ++ + S K +AL EEI++K +NKV+ N+GLA+C++D L+IG+ + GDG+S+ +V FRL++FRPF E++ GKIKSCS++G+++++ FF+DI++P + L +P F ++ WVW+ EDG + +L+ D EEIRF++ S+ F D SP A +E PYT+ AS + GLG+ WW Sbjct: 1 MFLLSRFSDIISIHPSNFWKPTKEALAEEIHKKYANKVIQNIGLAICVYDFLKIGEGIIKYGDGSSYMNVVFRLIIFRPFRGEVMLGKIKSCSEEGIRVTISFFDDIFIPKDMLFDPCVFRPDERAWVWKIEGEDGSEGTELYFDIDEEIRFQIESEDFVDISPKRNKNATAITGTEALESVSPYTLIASCSRDGLGIPAWWK 203
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|549722|sp|P35718.1|RPC8_YEAST (RecName: Full=DNA-directed RNA polymerase III subunit RPC8; Short=RNA polymerase III subunit C8; AltName: Full=DNA-directed RNA polymerase III 25 kDa polypeptide; AltName: Full=RNA polymerase III subunit C25) HSP 1 Score: 140.584 bits (353), Expect = 8.170e-41 Identity = 73/215 (33.95%), Postives = 120/215 (55.81%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQIS-LGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSE---------------PNSEKIP-YTITASVNGPGLGLINWW 198 MF+LS++ LVR+P Q + A+ ++N K +NK++ NVGL + ++D+L + + + PGDG+S+ +V FR +VF+PF+ EI+ G I C+ +G+++S LG F+DI++P L + + W+W P ++ K L+ D E+IRFR+ + F D P E E P +EK P Y + S G+GL++WW Sbjct: 1 MFILSKIADLVRIPPDQFHRDTISAITHQLNNKFANKIIPNVGLCITIYDLLTVEEGQLKPGDGSSYINVTFRAVVFKPFLGEIVTGWISKCTAEGIKVSLLGIFDDIFIPQNMLFEGCYYTPEESAWIW--PMDEETK--LYFDVNEKIRFRIEREVFVDVKPKSPKERELEERAQLENEIEGKNEETPQNEKPPAYALLGSCQTDGMGLVSWW 211
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|122057759|sp|Q557J3.1|RPC8_DICDI (RecName: Full=DNA-directed RNA polymerase III subunit rpc8; Short=RNA polymerase III subunit C8; AltName: Full=DNA-directed RNA polymerase III subunit H) HSP 1 Score: 137.117 bits (344), Expect = 5.019e-39 Identity = 76/220 (34.55%), Postives = 118/220 (53.64%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPT--------------EESSEPNSE--------KIPYTITASVNGPGLGLINWW 198 MF L ++ VR+ SQ + + +EI +K ++KVVLN GL V L+DIL GDS+V GDG +H V+FR++VF+PF E++ G IK S+ +QISLGFF +I++ P L NP +++ + +W WE+ ++ LF + G +RF++ F+ AP+ E E E K P + S+ GLG+++WW Sbjct: 1 MFHLITIEDKVRIAPSQFNNEV-QTIEDEIEKKYTSKVVLNAGLFVALYDILGTGDSYVHSGDGGAHLMVRFRMVVFKPFKGEVLEGVIKKSSRQSIQISLGFFHEIYLNPIELPNPSNYNQEEGLWYWEW-----NENQLFFEDGGRVRFKIDQVEFNPEISQPAPSPKNVNTEAMDSYSLREYKEKQIENENLLKQVKSPLILKVSMREAGLGMVSWW 214
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|73920767|sp|P39466.2|RPOE_SULAC (RecName: Full=DNA-directed RNA polymerase subunit E) HSP 1 Score: 66.6254 bits (161), Expect = 9.090e-13 Identity = 45/199 (22.61%), Postives = 91/199 (45.73%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWN 199 MF L K +VR+P G+S+ + + + ++ K++ ++G+ + + + + F+ GDGA++ V+F +LV+ P + E+I G++ GV +++G + + + + +FD + + E K + G+ +R + S S S S ++P I ++ P LG I W N Sbjct: 1 MFKLVRAKGIVRIPPEYFGQSVDEIAIKILRQEYQEKLIKDIGVVLGIVNAKASEEGFIIFGDGATYHEVEFDMLVYTPIIHEVIEGEVSQVDNYGVYVNMGPVDGLVHISQITDDNLKFDSNRGILIGE-------KSKKSIQKGDRVRAMIISASMS----------------SGRLP-RIALTMKQPYLGKIEWIN 175
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|2500642|sp|Q57840.1|RPOE1_METJA (RecName: Full=DNA-directed RNA polymerase subunit E') HSP 1 Score: 58.151 bits (139), Expect = 1.398e-9 Identity = 42/197 (21.32%), Postives = 90/197 (45.69%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINW 197 M+ + E+ +V++P + GK L + +++ + K ++ +VG + + D+ +IG+ V GDG+++ V F LV+ P M E+I G++ + G + LG + + + + + +D + + G + ++ G+ +R R+ + S ++ KI T+ P LG + W Sbjct: 1 MYKILEIADVVKVPPEEFGKDLKETVKKILMEKYEGRLDKDVGFVLSIVDVKDIGEGKVVHGDGSAYHPVVFETLVYIPEMYELIEGEVVDVVEFGSFVRLGPLDGLIHVSQIMDDYVSYDPKREAII-------GKETGKVLEIGDYVRARIVAISL-----------KAERKRGSKIALTMRQ----PYLGKLEW 175
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|464672|sp|P34087.1|RPB7_YEAST (RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7; AltName: Full=B16) HSP 1 Score: 57.7658 bits (138), Expect = 1.437e-9 Identity = 28/104 (26.92%), Postives = 57/104 (54.81%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCL--FDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLG 102 MF + +L + L S G + L+ ++ +V G +C+ +D ++I + P DG++ +V++R +VF+PF E+++G + SCS+ G ++ +G Sbjct: 1 MFFIKDLSLNITLHPSFFGPRMKQYLKTKLLEEVEGSCTGKFGYILCVLDYDNIDIQRGRILPTDGSAEFNVKYRAVVFKPFKGEVVDGTVVSCSQHGFEVQVG 104
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|3334317|sp|O14459.1|RPB7_SCHPO (RecName: Full=DNA-directed RNA polymerase II subunit rpb7; Short=RNA polymerase II subunit B7) HSP 1 Score: 52.7582 bits (125), Expect = 9.929e-8 Identity = 36/135 (26.67%), Postives = 61/135 (45.19%), Query Frame = 0 Query: 2 FVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFD--ILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLG----FFEDIWVPPES----LQNPYRFDEADQV 126 F L EL + L S G + D L+ ++ V G +C+ D ++I V PG G + V++R +++RPF E+++ + + +K G ++G F VPP+ NP + DQV Sbjct: 3 FFLKELSLTISLHPSYFGPRMQDYLKAKLLADVEGTCSGQYGYIICVLDSNTIDIDKGRVVPGQGFAEFEVKYRAVLWRPFRGEVVDAIVTTVNKMGFFANIGPLNVFVSSHLVPPDMKFDPTANPPNYSGEDQV 137
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: XP_394665.1 (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Apis mellifera]) HSP 1 Score: 248.825 bits (634), Expect = 8.487e-84 Identity = 116/201 (57.71%), Postives = 153/201 (76.12%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSD---TSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWW 198 MFVL+ELK VR+P ++ + L DA+ +E+NRK++NKV LNVGL + L DI +I +S++FPGDGASHT V FR +VFRPFMEEI+ GKI+SCS DGV ++LGFFEDI +PP LQ+P RFD+ +Q WVWEY T DG KHDLFMD GE IRFRV S++F++ T PN++ E+SE + PYT+ +++ PGLGL+ WW Sbjct: 1 MFVLAELKDTVRIPPAEFKQKLNDAITDELNRKLANKVYLNVGLCIALHDITKIEESYIFPGDGASHTKVIFRYIVFRPFMEEILIGKIRSCSIDGVHVTLGFFEDIVIPPHKLQHPSRFDQMEQAWVWEYDTGDGEKHDLFMDAGEIIRFRVVSETFTEALPTGPNISGETETSEAKNIS-PYTLGGAIDEPGLGLLTWW 200
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: gb|EEZ99545.1| (DNA-directed RNA polymerase III subunit RPC8-like Protein [Tribolium castaneum]) HSP 1 Score: 248.054 bits (632), Expect = 1.370e-83 Identity = 107/199 (53.77%), Postives = 155/199 (77.89%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWN 199 MF+++E+K++ R+P L DA+ E+N+K++NKVVLNVGL + L+DI + +SF+FPGDGASHT V FR +VFRPF+EEI+ GKI+SCS++GV ++LGFF+DI +PP +LQ+P +F+E +Q WVWEY T DG KHDLFMD GE I+FRVT++ F++T P +E+ + + K+PY++T S+N PGLGL++WW+ Sbjct: 1 MFIVAEMKNVTRIPPELFNLKLNDAIAGELNKKLANKVVLNVGLCIALYDITSLQESFIFPGDGASHTRVSFRYIVFRPFIEEILVGKIRSCSQEGVHVTLGFFDDILIPPSALQHPSKFNETEQAWVWEYDTGDGCKHDLFMDAGETIKFRVTAEFFNETCP-TGSLQETQDKSENKVPYSLTGSINEPGLGLLSWWD 198
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: EEB10445.1 (DNA-directed RNA polymerase III subunit 22.9 kDa polypeptide, putative [Pediculus humanus corporis]) HSP 1 Score: 239.965 bits (611), Expect = 1.957e-80 Identity = 117/200 (58.50%), Postives = 156/200 (78.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNS--EKIPYTITASVNGPGLGLINWW 198 MFVL+E+K +R+ K L DA+ EEIN+K++NKVV+NVGL++ L+DI E+GDS + PGDG HT V FR +VFRPF+ EI+ GK+KSCS++GV ++LGFF+DI +P +LQ+P RFDEA+QVWVWEY D KHDLFMD GE IRFRVT+++F +TSP V P E SS+ +S K+PY++TAS+N PGLGL++WW Sbjct: 1 MFVLAEIKDYIRISPCNFHKPLKDAISEEINKKLANKVVMNVGLSIALWDISELGDSHIIPGDGCFHTRVCFRYVVFRPFLTEILVGKVKSCSQEGVVVTLGFFDDIIIPSSALQHPSRFDEAEQVWVWEYQV-DEEKHDLFMDIGEPIRFRVTAETFEETSP-VGP-ENSSDGDSVETKVPYSLTASINEPGLGLMSWW 197
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: EAA00210.3 (AGAP012122-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 238.039 bits (606), Expect = 5.932e-79 Identity = 112/213 (52.58%), Postives = 152/213 (71.36%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEE---------------SSEPNSEKIPYTITASVNGPGLGLINWW 198 MFVL+ELK VR+ G LP+A+++EINRK++NKV+LNVGL + L DI+++GDS + PGDGASHT V FR +VFRP + ++I GKI+SCS++GV I+LGFF+DI +PP +LQ+P R++EA+Q WVWEYP EDG HDL+MD GE I+FRV+ + F ++SP P +E SS S K PY I A++N GLGL++WW Sbjct: 1 MFVLAELKDNVRIAPELFGLKLPEAIKDEINRKLANKVLLNVGLCIALKDIVKLGDSIILPGDGASHTEVNFRYIVFRPMIGDVITGKIRSCSREGVHITLGFFDDILIPPSALQHPSRYEEAEQAWVWEYPLEDGNTHDLYMDIGENIKFRVSGEVFEESSPIGPPDQEVPSSSTGASTSGGAGSSGQESNKTPYRIVAAINESGLGLLSWW 213
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: gb|EEC11553.1| (DNA-directed RNA polymerase subunit E', putative [Ixodes scapularis]) HSP 1 Score: 229.565 bits (584), Expect = 2.739e-76 Identity = 106/201 (52.74%), Postives = 154/201 (76.62%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNS--EKIPYTITASVNGPGLGLINWWN 199 MFV+SE+ +R+P + DA+ E++NR+++NKVV+NVGL + LFD+ +I DS + PGDG+ HT V+FR +VFRPFM+E++ GKI+SCS++GV +S+GFF+DI +PP++LQ+P RFDEA+Q+WVWEY ++D KHD+FMD GE+IRFRV +++F DTSP E SE S ++IPY++T S++ GLGL+ WW Sbjct: 1 MFVISEMSDNIRIPPWLFRLNPNDAIVEQLNRRLANKVVINVGLCIALFDVTKIEDSKILPGDGSFHTTVEFRYVVFRPFMDEVLVGKIRSCSQEGVYVSMGFFDDILIPPDALQHPSRFDEAEQLWVWEYESDD-KKHDMFMDLGEQIRFRVVAETFVDTSPVGPEMAEMSENESKEKRIPYSLTGSISESGLGLLKWWT 200
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: AGB94414.1 (CG7339, isoform B [Drosophila melanogaster]) HSP 1 Score: 229.18 bits (583), Expect = 1.295e-75 Identity = 108/213 (50.70%), Postives = 145/213 (68.08%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSE--------------KIPYTITASVNGPGLGLINWWN 199 MFVL+ELK VR+ Q L DA+R+EI+RK++NKV+LNVGL + L DI+ + DS + PGDGASHT V FR +VFRP + +I GKI++CS++GV ++LGFF+DI +P +LQ+P RFDEA+Q WVWEYP EDG KHDLFMD GE I+FRV+ + F +TSP P E+ K PY I ++N GLG+++WW+ Sbjct: 1 MFVLAELKDNVRIAPDQFHLKLVDAVRDEIDRKLANKVLLNVGLCIALKDIVSLKDSIILPGDGASHTEVLFRYVVFRPMVGTVITGKIRNCSREGVHVTLGFFDDILIPHAALQHPSRFDEAEQAWVWEYPLEDGAKHDLFMDVGEPIKFRVSREIFEETSPIGPPKTEAQTQQGASTSAAVASATSQEVKTPYRIIGAINESGLGVLSWWD 213
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: AAF50032.1 (CG7339, isoform A [Drosophila melanogaster]) HSP 1 Score: 229.18 bits (583), Expect = 1.295e-75 Identity = 108/213 (50.70%), Postives = 145/213 (68.08%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSE--------------KIPYTITASVNGPGLGLINWWN 199 MFVL+ELK VR+ Q L DA+R+EI+RK++NKV+LNVGL + L DI+ + DS + PGDGASHT V FR +VFRP + +I GKI++CS++GV ++LGFF+DI +P +LQ+P RFDEA+Q WVWEYP EDG KHDLFMD GE I+FRV+ + F +TSP P E+ K PY I ++N GLG+++WW+ Sbjct: 1 MFVLAELKDNVRIAPDQFHLKLVDAVRDEIDRKLANKVLLNVGLCIALKDIVSLKDSIILPGDGASHTEVLFRYVVFRPMVGTVITGKIRNCSREGVHVTLGFFDDILIPHAALQHPSRFDEAEQAWVWEYPLEDGAKHDLFMDVGEPIKFRVSREIFEETSPIGPPKTEAQTQQGASTSAAVASATSQEVKTPYRIIGAINESGLGVLSWWD 213
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: EFX89005.1 (hypothetical protein DAPPUDRAFT_41099 [Daphnia pulex]) HSP 1 Score: 225.328 bits (573), Expect = 1.725e-74 Identity = 106/204 (51.96%), Postives = 153/204 (75.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSP----NVAPTEESSEP--NSEKIPYTITASVNGPGLGLINWW 198 MFVL+ +K VR+P+ + + + A+ EE+N K +NKVVL+VGL + L+DI++ G+SF+ PGD HT V+FR +VFRPFME+I+ G+IK+C K+ VQ+SLGFF++I++ E+LQ RFDE +Q WVWEY +ED GKHDLFMD GEEIRF+V ++ F+DT+P N AP + S +P +++++ Y I AS+N GLGL++WW Sbjct: 1 MFVLALVKQTVRVPSEKFNRDIDQAISEELNLKFANKVVLDVGLCIALWDIIKRGESFILPGDSGHHTKVEFRYVVFRPFMEQILVGRIKNCDKESVQVSLGFFDEIFISSENLQKNSRFDETEQTWVWEYQSED-GKHDLFMDTGEEIRFKVVAEYFADTTPSGPSNEAP-DSSLDPIRDNKRMAYRINASINESGLGLLSWW 202
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: gb|KFM81263.1| (DNA-directed RNA polymerase III subunit RPC8, partial [Stegodyphus mimosarum]) HSP 1 Score: 212.616 bits (540), Expect = 1.260e-69 Identity = 101/201 (50.25%), Postives = 142/201 (70.65%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGK-HDLFMDPGEEIRFRVTSQSFSD-TSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWN 199 MF L E+K VR+ + K L DA+ +E+ K +NKVV+NVGL + LF+I ++ +S++FPGDGASHT V F +VFRPFM EI+ GKI+SCS++GV +S+GFF+DI +P + LQ+P RFDE +Q+WVW + E+ G+ HDLFMD E IRFRV ++F D T + +E +IPY +T S+N PGLGL++WW+ Sbjct: 1 MFTLVEMKDTVRIRPWRFHKPLQDAIADELRLKFANKVVMNVGLCIALFEITKLEESYIFPGDGASHTGVYFSYIVFRPFMNEILVGKIRSCSREGVHVSIGFFDDILIPQDVLQHPSRFDEKEQLWVWVFSNEESGQTHDLFMDRDEPIRFRVIDETFVDTTPTSPETETSDAEEKDRRIPYNLTGSINEPGLGLLSWWS 201
BLAST of EMLSAG00000000471 vs. nr
Match: gi|290562083|gb|ADD38438.1| (DNA-directed RNA polymerase III subunit RPC8 [Lepeophtheirus salmonis]) HSP 1 Score: 410.223 bits (1053), Expect = 5.874e-145 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT Sbjct: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200
BLAST of EMLSAG00000000471 vs. nr
Match: gi|225719760|gb|ACO15726.1| (DNA-directed RNA polymerase III subunit RPC8 [Caligus clemensi]) HSP 1 Score: 342.043 bits (876), Expect = 4.948e-118 Identity = 163/203 (80.30%), Postives = 185/203 (91.13%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEES---SEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVLSE+KSL+RLPA QL + LP+AL EEINRK+SNKVVLNVGLAVCLFDILEIG+SF+FPGD ASHT V FR+LVFRPFMEE++NGKIKSCSKDGVQ+SLGFFEDIW+PPESLQ+PYRFDEADQVWVWEYPTEDG KHDLFMD GEEIRFRVT++SF DTSPNV P ES +P+S+K+PY+ITASVN PGLGL++WWNT Sbjct: 1 MFVLSEVKSLIRLPALQLNRPLPEALSEEINRKLSNKVVLNVGLAVCLFDILEIGESFLFPGDEASHTRVVFRILVFRPFMEEVLNGKIKSCSKDGVQVSLGFFEDIWIPPESLQHPYRFDEADQVWVWEYPTEDGEKHDLFMDTGEEIRFRVTAESFIDTSPNVDPNPESRSTQQPDSDKLPYSITASVNEPGLGLLSWWNT 203
BLAST of EMLSAG00000000471 vs. nr
Match: gi|225711416|gb|ACO11554.1| (DNA-directed RNA polymerase III subunit RPC8 [Caligus rogercresseyi]) HSP 1 Score: 339.347 bits (869), Expect = 7.106e-117 Identity = 161/201 (80.10%), Postives = 184/201 (91.54%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEE-SSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVLSE KSL+RLPA LG++LP+AL EEINRK+SN+VV NVGLAVCLFDILEIG+SF+FPGDGASHT V FR+LVFRPFMEE+INGKIKSCSKDGVQ+SLGFFEDIW+PPE+LQ+PYRFDEADQVWVWEYPTEDG KHDLFMDPGEEIRFRVT+++FSDTSPNV P E S +++KIPYTI+ASVN PGLGL +WWN+ Sbjct: 1 MFVLSECKSLIRLPALHLGRNLPEALSEEINRKLSNRVVHNVGLAVCLFDILEIGESFLFPGDGASHTRVNFRILVFRPFMEEVINGKIKSCSKDGVQVSLGFFEDIWIPPEALQHPYRFDEADQVWVWEYPTEDGEKHDLFMDPGEEIRFRVTAETFSDTSPNVDPNAEGQSGESNDKIPYTISASVNEPGLGLHSWWNS 201
BLAST of EMLSAG00000000471 vs. nr
Match: gi|225711736|gb|ACO11714.1| (DNA-directed RNA polymerase III subunit RPC8 [Caligus rogercresseyi]) HSP 1 Score: 302.368 bits (773), Expect = 5.118e-102 Identity = 141/170 (82.94%), Postives = 158/170 (92.94%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEE 170 MFVLSE KSL+RLPA LG++LP+AL EEINRK+SN+VV NVGLAVCLFDILEIG+SF+ PGDGASHT V FR+LVFRPFMEE+INGKIKSCSKDGVQ+SLGFFEDIW+PPE+LQ+PYRFDEADQVWVWEYPTEDG KHDLFMDPGEEIRFRVT+++FSDTSPNV P E Sbjct: 1 MFVLSECKSLIRLPALHLGRNLPEALSEEINRKLSNRVVHNVGLAVCLFDILEIGESFLSPGDGASHTRVNFRILVFRPFMEEVINGKIKSCSKDGVQVSLGFFEDIWIPPEALQHPYRFDEADQVWVWEYPTEDGEKHDLFMDPGEEIRFRVTAETFSDTSPNVDPNAE 170
BLAST of EMLSAG00000000471 vs. nr
Match: gi|1133418507|ref|XP_019864765.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Aethina tumida]) HSP 1 Score: 254.988 bits (650), Expect = 1.531e-83 Identity = 111/201 (55.22%), Postives = 159/201 (79.10%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPT--EESSEPNSEKIPYTITASVNGPGLGLINWWN 199 MF+L+E+K++ R+P L +A+ E+N+K++NKVVLNVGL + L+DI+ + +S++FPGDGASHT V FR +VFRPF+EEII GKI+SCS++GV ++LGFF+DI +PP +LQ+P +F+E +Q WVWEY T DG KHDLFMD GE IRFRVT+++F++T P P +E+ E + K+PY++TAS+N PGLGL++WW+ Sbjct: 1 MFILAEMKNVTRIPPELFNLKLNEAIAGELNKKLANKVVLNVGLCIALYDIVSLQESYIFPGDGASHTRVNFRYIVFRPFVEEIIIGKIRSCSQEGVHVTLGFFDDILIPPSALQHPSKFNETEQAWVWEYDTGDGNKHDLFMDAGETIRFRVTAETFNETCPTGGPGTFQETQENHETKVPYSLTASINEPGLGLLSWWD 201
BLAST of EMLSAG00000000471 vs. nr
Match: gi|646707949|gb|KDR14462.1| (DNA-directed RNA polymerase III subunit RPC8 [Zootermopsis nevadensis]) HSP 1 Score: 253.447 bits (646), Expect = 6.513e-83 Identity = 114/204 (55.88%), Postives = 154/204 (75.49%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSE------KIPYTITASVNGPGLGLINWW 198 MFVL+E+K ++R P L DA+ EE+N+K++NKVVLNVGL + L DI ++ DS++FPGDGA+HT V FR +VFRPF+EE+I GKI+SCS++GV ++LGFF+DI +PP +LQ+P RFDE +Q WVWEY T DG KHDLFMDPGE IRFRVT+++F +TSP+ + + P E K+PY +T S+N GLGL++WW Sbjct: 1 MFVLAEMKHVIRTPPHIFHLKLNDAIAEELNKKLANKVVLNVGLCIALHDITQLEDSYIFPGDGAAHTKVNFRYVVFRPFIEEVITGKIRSCSREGVHVTLGFFDDIIIPPNALQHPSRFDETEQAWVWEYNTGDGDKHDLFMDPGETIRFRVTAETFVETSPSGPENTDITTPGGETSAEEPKVPYMLTGSINESGLGLLSWW 204
BLAST of EMLSAG00000000471 vs. nr
Match: gi|591305537|ref|XP_007079512.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Panthera tigris altaica] >gi|591305539|ref|XP_007079513.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Panthera tigris altaica]) HSP 1 Score: 253.062 bits (645), Expect = 9.429e-83 Identity = 118/204 (57.84%), Postives = 154/204 (75.49%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSP----NVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP + T S EP ++ PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPTGPGSAEATSSSEEPPKKEAPYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. nr
Match: gi|543263003|ref|XP_005421928.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1 [Geospiza fortis]) HSP 1 Score: 253.062 bits (645), Expect = 1.019e-82 Identity = 116/205 (56.59%), Postives = 157/205 (76.59%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNS------EKIPYTITASVNGPGLGLINWWN 199 MFVL E+ VR+P Q + L +++ EE+N+K++NKVV NVGL +CL+DI ++ DS++FPGDGASHT V FR +VFRPF++EI+ G+IKSCS+DGV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV ++F DTSP + E+S N+ ++ PYT+ S++ PGLGL++WW Sbjct: 1 MFVLVEMTDTVRIPPWQFERKLNESIAEELNKKLANKVVYNVGLCICLYDITKLEDSYIFPGDGASHTKVHFRYVVFRPFLDEILIGQIKSCSQDGVHVSLGFFDDIVIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDIGEEIRFRVVDETFVDTSPTGPSSAEASTSNAAEEVQKKEAPYTLVGSISEPGLGLLSWWT 204
BLAST of EMLSAG00000000471 vs. nr
Match: gi|558168892|ref|XP_006098584.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Myotis lucifugus] >gi|558168896|ref|XP_006098585.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Myotis lucifugus]) HSP 1 Score: 251.906 bits (642), Expect = 2.119e-82 Identity = 118/204 (57.84%), Postives = 154/204 (75.49%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEE----SSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFFEDI +PPESLQ P +FD+A+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP + E S EP ++ PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFEDILIPPESLQQPAKFDDAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPTGPSSAEVASTSEEPPKKEAPYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. nr
Match: gi|1080056514|ref|XP_018570002.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Anoplophora glabripennis]) HSP 1 Score: 251.906 bits (642), Expect = 2.603e-82 Identity = 110/200 (55.00%), Postives = 156/200 (78.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSE-KIPYTITASVNGPGLGLINWWN 199 MF+L+E+K++ R+P L DA+ E+N+K++NKVVLNVGL + LFDI+ + + F+FPGDGASHT V FR +VFRPF+EE++ GKI+SCS++GV ++LGFF+DI +PP +LQ+P +F+E +Q WVWEY T DG KHDLFMD GE IRFRVT++ F++T P T + ++ N E K+PY++T S+N PGLGL++WW+ Sbjct: 1 MFILAEMKNVTRIPPELFNLKLNDAIAGELNKKLANKVVLNVGLCIALFDIVSLQECFIFPGDGASHTRVTFRYIVFRPFIEEVLIGKIRSCSQEGVHVTLGFFDDILIPPSALQHPSKFNETEQAWVWEYDTGDGSKHDLFMDAGESIRFRVTAEVFNETCPTGPATMQENQENVENKVPYSLTGSINEPGLGLLSWWD 200
BLAST of EMLSAG00000000471 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold50_size457468-processed-gene-0.1 (protein:Tk03198 transcript:snap_masked-scaffold50_size457468-processed-gene-0.1-mRNA-1 annotation:"dna-directed rna polymerase iii subunit rpc8") HSP 1 Score: 202.986 bits (515), Expect = 2.269e-65 Identity = 108/232 (46.55%), Postives = 145/232 (62.50%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDA----------------------------------LREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGD--GASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNV---------APTEESSEPNSEKIPYTITASV 187 MF+LS L SLVR+ S+ + LP+A L + +N +++NKVV +GL + ++D++ IGDS++ P D GASHT V FR++VFRPF+EE++ GKIKSC++ GV +SLGFF+DI + PE+LQ+P RFDE +QVWVWEYPT D G HD+FMDPGE IRFRV S+ F DTSP+ A + SEP +KIPY + ASV Sbjct: 1 MFILSRLSSLVRIVPSEWKRPLPEAPSDGDGRGQVRPEAEDRSLEAQALTPRADLMRWALTDALNVQLANKVVFELGLVLSVYDLVSIGDSYLLPMDLEGASHTRVTFRVVVFRPFVEEVLQGKIKSCTRQGVFVSLGFFDDILIKPEALQHPKRFDETEQVWVWEYPT-DEGHHDMFMDPGETIRFRVISEHFVDTSPSAPDLHPKDPSAALAQGSEPEDKKIPYLLHASV 231 HSP 2 Score: 103.99 bits (258), Expect = 3.632e-27 Identity = 54/99 (54.55%), Postives = 64/99 (64.65%), Query Frame = 0 Query: 111 PESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNV---------APTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 PE + PY + VWVWEYPT D G HD+FMDPGE IRFRV S+ F DTSP+ A + SEP +KIPY + ASVN PGLGLI+WWN+ Sbjct: 218 PEDKKIPYLLHAS--VWVWEYPT-DEGHHDMFMDPGETIRFRVISEHFVDTSPSAPDLHPKDPSAALAQGSEPEDKKIPYLLHASVNEPGLGLISWWNS 313 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000471 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000000471 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 6
BLAST of EMLSAG00000000471 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000471 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 10
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 9
BLAST of EMLSAG00000000471 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000471 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s106:813843..814445+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000471-683237 ID=EMLSAG00000000471-683237|Name=EMLSAG00000000471|organism=Lepeophtheirus salmonis|type=gene|length=603bp|location=Sequence derived from alignment at LSalAtl2s106:813843..814445+ (Lepeophtheirus salmonis)back to top Add to Basket
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