EMLSAG00000000471, EMLSAG00000000471-683237 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:rpc25-2 "RNA polymerase III subunit" species:44689 "Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA;ISS] [GO:0001056 "RNA polymerase III activity" evidence=IBA] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=ISS;IBA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=ISS;IBA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] InterPro:IPR005576 Pfam:PF03876 dictyBase:DDB_G0273425 dictyBase:DDB_G0273523 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AAFI02000010 GO:GO:0005666 GO:GO:0003899 eggNOG:COG1095 Gene3D:3.30.1490.120 SUPFAM:SSF88798 GO:GO:0006384 InterPro:IPR013238 Pfam:PF08292 RefSeq:XP_644608.1 RefSeq:XP_644642.1 ProteinModelPortal:Q557J3 STRING:44689.DDB_0216296 EnsemblProtists:DDB0216296 EnsemblProtists:DDB0304862 GeneID:8618972 GeneID:8619005 KEGG:ddi:DDB_G0273425 KEGG:ddi:DDB_G0273523 OMA:VESISYP ProtClustDB:CLSZ2729227 PRO:PR:Q557J3 Uniprot:Q557J3) HSP 1 Score: 137.117 bits (344), Expect = 7.876e-38 Identity = 76/220 (34.55%), Postives = 118/220 (53.64%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPT--------------EESSEPNSE--------KIPYTITASVNGPGLGLINWW 198 MF L ++ VR+ SQ + + +EI +K ++KVVLN GL V L+DIL GDS+V GDG +H V+FR++VF+PF E++ G IK S+ +QISLGFF +I++ P L NP +++ + +W WE+ ++ LF + G +RF++ F+ AP+ E E E K P + S+ GLG+++WW Sbjct: 1 MFHLITIEDKVRIAPSQFNNEV-QTIEDEIEKKYTSKVVLNAGLFVALYDILGTGDSYVHSGDGGAHLMVRFRMVVFKPFKGEVLEGVIKKSSRQSIQISLGFFHEIYLNPIELPNPSNYNQEEGLWYWEW-----NENQLFFEDGGRVRFKIDQVEFNPEISQPAPSPKNVNTEAMDSYSLREYKEKQIENENLLKQVKSPLILKVSMREAGLGMVSWW 214
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:rpc25-1 "RNA polymerase III subunit" species:44689 "Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA;ISS] [GO:0001056 "RNA polymerase III activity" evidence=IBA] [GO:0006384 "transcription initiation from RNA polymerase III promoter" evidence=ISS;IBA] [GO:0005666 "DNA-directed RNA polymerase III complex" evidence=ISS;IBA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] InterPro:IPR005576 Pfam:PF03876 dictyBase:DDB_G0273425 dictyBase:DDB_G0273523 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AAFI02000010 GO:GO:0005666 GO:GO:0003899 eggNOG:COG1095 Gene3D:3.30.1490.120 SUPFAM:SSF88798 GO:GO:0006384 InterPro:IPR013238 Pfam:PF08292 RefSeq:XP_644608.1 RefSeq:XP_644642.1 ProteinModelPortal:Q557J3 STRING:44689.DDB_0216296 EnsemblProtists:DDB0216296 EnsemblProtists:DDB0304862 GeneID:8618972 GeneID:8619005 KEGG:ddi:DDB_G0273425 KEGG:ddi:DDB_G0273523 OMA:VESISYP ProtClustDB:CLSZ2729227 PRO:PR:Q557J3 Uniprot:Q557J3) HSP 1 Score: 137.117 bits (344), Expect = 7.876e-38 Identity = 76/220 (34.55%), Postives = 118/220 (53.64%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPT--------------EESSEPNSE--------KIPYTITASVNGPGLGLINWW 198 MF L ++ VR+ SQ + + +EI +K ++KVVLN GL V L+DIL GDS+V GDG +H V+FR++VF+PF E++ G IK S+ +QISLGFF +I++ P L NP +++ + +W WE+ ++ LF + G +RF++ F+ AP+ E E E K P + S+ GLG+++WW Sbjct: 1 MFHLITIEDKVRIAPSQFNNEV-QTIEDEIEKKYTSKVVLNAGLFVALYDILGTGDSYVHSGDGGAHLMVRFRMVVFKPFKGEVLEGVIKKSSRQSIQISLGFFHEIYLNPIELPNPSNYNQEEGLWYWEW-----NENQLFFEDGGRVRFKIDQVEFNPEISQPAPSPKNVNTEAMDSYSLREYKEKQIENENLLKQVKSPLILKVSMREAGLGMVSWW 214
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:AT1G06790 "AT1G06790" species:3702 "Arabidopsis thaliana" [GO:0003899 "DNA-directed RNA polymerase activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006351 "transcription, DNA-templated" evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0009062 "fatty acid catabolic process" evidence=RCA] InterPro:IPR005576 Pfam:PF03876 EMBL:CP002684 GO:GO:0006351 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AC011001 GO:GO:0003899 eggNOG:COG1095 Gene3D:3.30.1490.120 SUPFAM:SSF88798 UniGene:At.26438 UniGene:At.48160 HOGENOM:HOG000157370 KO:K03022 InterPro:IPR013238 Pfam:PF08292 OMA:VESISYP EMBL:AY065288 EMBL:AY142661 PIR:G86202 RefSeq:NP_172164.1 DNASU:837190 EnsemblPlants:AT1G06790.1 GeneID:837190 KEGG:ath:AT1G06790 TAIR:At1g06790 InParanoid:Q9M9Y6 ProtClustDB:CLSN2682503 PRO:PR:Q9M9Y6 Genevestigator:Q9M9Y6 Uniprot:Q9M9Y6) HSP 1 Score: 133.65 bits (335), Expect = 5.583e-37 Identity = 75/205 (36.59%), Postives = 118/205 (57.56%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYR-----FDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MF LSEL+ +R+P L L DA++ + +KV+ ++GL V ++DI + FV PGDGA+ V R++VFRPF+ E+I K K +G++++LGFF+DI+VP + P R ++ +WVWEY K D +D +I+FRV S S+ P+V PTE +E P +T +++ GLG ++WW++ Sbjct: 1 MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSIYDIKSVEGGFVLPGDGAATYKVGLRIVVFRPFVGEVIAAKFKESDANGLRLTLGFFDDIYVPAPLMPKPNRCEPDPYNRKQMIWVWEYGEP---KEDYIVDDACQIKFRVESISY----PSV-PTER-AEDAKPFAPMVVTGNMDDDGLGPVSWWDS 196
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:POLR3H "DNA-directed RNA polymerase III subunit RPC8" species:9606 "Homo sapiens" [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] InterPro:IPR005576 Pfam:PF03876 GO:GO:0006351 EMBL:AL023553 GO:GO:0003899 Gene3D:3.30.1490.120 SUPFAM:SSF88798 HGNC:HGNC:30349 ProteinModelPortal:F8WDV1 SMR:F8WDV1 PRIDE:F8WDV1 Ensembl:ENST00000431534 NextBio:35514162 ArrayExpress:F8WDV1 Bgee:F8WDV1 Uniprot:F8WDV1) HSP 1 Score: 122.865 bits (307), Expect = 7.342e-34 Identity = 56/98 (57.14%), Postives = 75/98 (76.53%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQ 98 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRCVVFHPFLDEILIGKIKGCSPEGVH 98
BLAST of EMLSAG00000000471 vs. GO
Match: - (symbol:POLR3H "DNA-directed RNA polymerase III subunit RPC8" species:9606 "Homo sapiens" [GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] InterPro:IPR005576 Pfam:PF03876 GO:GO:0006351 EMBL:AL023553 GO:GO:0003899 Gene3D:3.30.1490.120 SUPFAM:SSF88798 HGNC:HGNC:30349 ProteinModelPortal:E7ERZ2 SMR:E7ERZ2 Ensembl:ENST00000442616 NextBio:35500115 ArrayExpress:E7ERZ2 Bgee:E7ERZ2 Uniprot:E7ERZ2) HSP 1 Score: 87.4261 bits (215), Expect = 6.999e-21 Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHT 68 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHT 68
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592860033|gb|GAXK01097529.1| (TSA: Calanus finmarchicus comp38167_c0_seq1 transcribed RNA sequence) HSP 1 Score: 265.003 bits (676), Expect = 6.416e-88 Identity = 120/200 (60.00%), Postives = 156/200 (78.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVLSE+++L+RL KSL D L +EINRK++NKV++NVGL + L DILE+G+SF+FPGDGASHT V+FR+LVFRP MEE++ GKIKSCSK+GV +SL FF+DI +P ESLQ+P RFDE + VWVWEYP E+G HDLFMDPGE+IR RV S+ F DT P ES + ++ PY++ ++N PGLGL++WWN+ Sbjct: 147 MFVLSEIRTLIRLLPRGFDKSLEDQLTDEINRKLANKVMINVGLCLSLHDILEVGESFLFPGDGASHTKVRFRMLVFRPQMEEVLTGKIKSCSKEGVHVSLEFFDDILIPAESLQHPSRFDETESVWVWEYPVEEGEHHDLFMDPGEKIRMRVVSEQFVDTGPTKPKITESEQEEAKTPPYSLVGTINEPGLGLLSWWNS 746
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592890126|gb|GAXK01068249.1| (TSA: Calanus finmarchicus comp17989_c0_seq1 transcribed RNA sequence) HSP 1 Score: 43.5134 bits (101), Expect = 1.692e-4 Identity = 32/154 (20.78%), Postives = 64/154 (41.56%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVT 154 MF L + L G L D +++++ +V G + + I +G + PG G V+++ +VFRPF E+++ + +K G+ +G ++ S+ FD ++ E D+ + +EIR ++ Sbjct: 175 MFYHISLDHEIMLHPRYFGPQLMDTVKQKLFTEVEGTCTGKYGFVIAVTTIDCVGAGLIQPGQGFVLYPVKYKAIVFRPFKGEVLDAVVTQVNKVGLFTEIGPLS-CFISRHSIPADMSFDPNSNPPCYKTSDE-----DMVIQQDDEIRLKIV 618
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592799496|gb|GAXK01155072.1| (TSA: Calanus finmarchicus comp1485599_c0_seq1 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 1.080e+0 Identity = 20/71 (28.17%), Postives = 33/71 (46.48%), Query Frame = 0 Query: 86 NGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQ 156 NG I + + ++G +DI SLQ +D + + E PT D K ++ P + RFR +S+ Sbjct: 1428 NGLISTPQEQETVDTIGVTDDIIPAISSLQTKETWDNIGETIIGEIPTRDLPKVEILEQPCQSYRFRYSSE 1640
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592799495|gb|GAXK01155073.1| (TSA: Calanus finmarchicus comp1485599_c0_seq2 transcribed RNA sequence) HSP 1 Score: 32.3426 bits (72), Expect = 1.108e+0 Identity = 20/71 (28.17%), Postives = 33/71 (46.48%), Query Frame = 0 Query: 86 NGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQ 156 NG I + + ++G +DI SLQ +D + + E PT D K ++ P + RFR +S+ Sbjct: 1402 NGLISTPQEQETVDTIGVTDDIIPAISSLQTKETWDNIGETIIGEIPTRDLPKVEILEQPCQSYRFRYSSE 1614
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592779557|gb|GAXK01175011.1| (TSA: Calanus finmarchicus comp1118069_c0_seq3 transcribed RNA sequence) HSP 1 Score: 29.261 bits (64), Expect = 5.152e+0 Identity = 10/30 (33.33%), Postives = 22/30 (73.33%), Query Frame = 0 Query: 71 QFRLLVFRPFMEEIINGKIKSCSKDGVQIS 100 +F++ F+ ++ I++GKI C KDG++++ Sbjct: 221 EFKMTEFQSMLDFILDGKIDYCEKDGMKLA 310
BLAST of EMLSAG00000000471 vs. C. finmarchicus
Match: gi|592779559|gb|GAXK01175009.1| (TSA: Calanus finmarchicus comp1118069_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 7.061e+0 Identity = 10/31 (32.26%), Postives = 22/31 (70.97%), Query Frame = 0 Query: 70 VQFRLLVFRPFMEEIINGKIKSCSKDGVQIS 100 +F++ F+ ++ I++GKI C KDG++++ Sbjct: 218 TEFKMTEFQSMLDFILDGKIDYCEKDGMKLA 310
BLAST of EMLSAG00000000471 vs. L. salmonis peptides
Match: EMLSAP00000000471 (pep:novel supercontig:LSalAtl2s:LSalAtl2s106:813843:814445:1 gene:EMLSAG00000000471 transcript:EMLSAT00000000471 description:"augustus_masked-LSalAtl2s106-processed-gene-8.4") HSP 1 Score: 410.223 bits (1053), Expect = 5.865e-147 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT Sbjct: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|29428071|sp|Q9Y535.1|RPC8_HUMAN (RecName: Full=DNA-directed RNA polymerase III subunit RPC8; Short=RNA polymerase III subunit C8; AltName: Full=DNA-directed RNA polymerase III subunit H; AltName: Full=RNA polymerase III subunit 22.9 kDa subunit; Short=RPC22.9) HSP 1 Score: 249.21 bits (635), Expect = 1.423e-83 Identity = 117/205 (57.07%), Postives = 155/205 (75.61%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKI-----PYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP P+ + +SE++ PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRCVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPT-GPSSADATTSSEELPKKEAPYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|29427995|sp|Q9D2C6.2|RPC8_MOUSE (RecName: Full=DNA-directed RNA polymerase III subunit RPC8; AltName: Full=DNA-directed RNA polymerase III subunit H; AltName: Full=RNA polymerase III subunit C7) HSP 1 Score: 242.276 bits (617), Expect = 6.729e-81 Identity = 117/205 (57.07%), Postives = 151/205 (73.66%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPN-----VAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP A + P E PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPTGPSSAEAASSSEELPKKEA-PYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|122136999|sp|Q2T9X1.1|RPC8_BOVIN (RecName: Full=DNA-directed RNA polymerase III subunit RPC8; Short=RNA polymerase III subunit C8; AltName: Full=DNA-directed RNA polymerase III subunit 22.9 kDa polypeptide; AltName: Full=DNA-directed RNA polymerase III subunit H) HSP 1 Score: 239.58 bits (610), Expect = 7.711e-80 Identity = 115/205 (56.10%), Postives = 151/205 (73.66%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPN-----VAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKV+ NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEE+RFRV +SF DTSP A + P E PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIDEELNKKLANKVMYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDIGEEVRFRVVDESFVDTSPTGPSSAEAASSSEELPKKEA-PYTLMGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|74582844|sp|O94285.1|RPC8_SCHPO (RecName: Full=DNA-directed RNA polymerase III subunit rpc8; Short=RNA polymerase III subunit C8; AltName: Full=RNA polymerase III subunit C25) HSP 1 Score: 171.014 bits (432), Expect = 6.569e-53 Identity = 83/203 (40.89%), Postives = 131/203 (64.53%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGK-HDLFMDPGEEIRFRVTSQSFSDTSPNV---APTEESSEPNSEKIPYTITASVNGPGLGLINWWN 199 MF+LS ++ + S K +AL EEI++K +NKV+ N+GLA+C++D L+IG+ + GDG+S+ +V FRL++FRPF E++ GKIKSCS++G+++++ FF+DI++P + L +P F ++ WVW+ EDG + +L+ D EEIRF++ S+ F D SP A +E PYT+ AS + GLG+ WW Sbjct: 1 MFLLSRFSDIISIHPSNFWKPTKEALAEEIHKKYANKVIQNIGLAICVYDFLKIGEGIIKYGDGSSYMNVVFRLIIFRPFRGEVMLGKIKSCSEEGIRVTISFFDDIFIPKDMLFDPCVFRPDERAWVWKIEGEDGSEGTELYFDIDEEIRFQIESEDFVDISPKRNKNATAITGTEALESVSPYTLIASCSRDGLGIPAWWK 203
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|549722|sp|P35718.1|RPC8_YEAST (RecName: Full=DNA-directed RNA polymerase III subunit RPC8; Short=RNA polymerase III subunit C8; AltName: Full=DNA-directed RNA polymerase III 25 kDa polypeptide; AltName: Full=RNA polymerase III subunit C25) HSP 1 Score: 140.584 bits (353), Expect = 8.170e-41 Identity = 73/215 (33.95%), Postives = 120/215 (55.81%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQIS-LGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSE---------------PNSEKIP-YTITASVNGPGLGLINWW 198 MF+LS++ LVR+P Q + A+ ++N K +NK++ NVGL + ++D+L + + + PGDG+S+ +V FR +VF+PF+ EI+ G I C+ +G+++S LG F+DI++P L + + W+W P ++ K L+ D E+IRFR+ + F D P E E P +EK P Y + S G+GL++WW Sbjct: 1 MFILSKIADLVRIPPDQFHRDTISAITHQLNNKFANKIIPNVGLCITIYDLLTVEEGQLKPGDGSSYINVTFRAVVFKPFLGEIVTGWISKCTAEGIKVSLLGIFDDIFIPQNMLFEGCYYTPEESAWIW--PMDEETK--LYFDVNEKIRFRIEREVFVDVKPKSPKERELEERAQLENEIEGKNEETPQNEKPPAYALLGSCQTDGMGLVSWW 211
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|122057759|sp|Q557J3.1|RPC8_DICDI (RecName: Full=DNA-directed RNA polymerase III subunit rpc8; Short=RNA polymerase III subunit C8; AltName: Full=DNA-directed RNA polymerase III subunit H) HSP 1 Score: 137.117 bits (344), Expect = 5.019e-39 Identity = 76/220 (34.55%), Postives = 118/220 (53.64%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPT--------------EESSEPNSE--------KIPYTITASVNGPGLGLINWW 198 MF L ++ VR+ SQ + + +EI +K ++KVVLN GL V L+DIL GDS+V GDG +H V+FR++VF+PF E++ G IK S+ +QISLGFF +I++ P L NP +++ + +W WE+ ++ LF + G +RF++ F+ AP+ E E E K P + S+ GLG+++WW Sbjct: 1 MFHLITIEDKVRIAPSQFNNEV-QTIEDEIEKKYTSKVVLNAGLFVALYDILGTGDSYVHSGDGGAHLMVRFRMVVFKPFKGEVLEGVIKKSSRQSIQISLGFFHEIYLNPIELPNPSNYNQEEGLWYWEW-----NENQLFFEDGGRVRFKIDQVEFNPEISQPAPSPKNVNTEAMDSYSLREYKEKQIENENLLKQVKSPLILKVSMREAGLGMVSWW 214
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|73920767|sp|P39466.2|RPOE_SULAC (RecName: Full=DNA-directed RNA polymerase subunit E) HSP 1 Score: 66.6254 bits (161), Expect = 9.090e-13 Identity = 45/199 (22.61%), Postives = 91/199 (45.73%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWN 199 MF L K +VR+P G+S+ + + + ++ K++ ++G+ + + + + F+ GDGA++ V+F +LV+ P + E+I G++ GV +++G + + + + +FD + + E K + G+ +R + S S S S ++P I ++ P LG I W N Sbjct: 1 MFKLVRAKGIVRIPPEYFGQSVDEIAIKILRQEYQEKLIKDIGVVLGIVNAKASEEGFIIFGDGATYHEVEFDMLVYTPIIHEVIEGEVSQVDNYGVYVNMGPVDGLVHISQITDDNLKFDSNRGILIGE-------KSKKSIQKGDRVRAMIISASMS----------------SGRLP-RIALTMKQPYLGKIEWIN 175
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|2500642|sp|Q57840.1|RPOE1_METJA (RecName: Full=DNA-directed RNA polymerase subunit E') HSP 1 Score: 58.151 bits (139), Expect = 1.398e-9 Identity = 42/197 (21.32%), Postives = 90/197 (45.69%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINW 197 M+ + E+ +V++P + GK L + +++ + K ++ +VG + + D+ +IG+ V GDG+++ V F LV+ P M E+I G++ + G + LG + + + + + +D + + G + ++ G+ +R R+ + S ++ KI T+ P LG + W Sbjct: 1 MYKILEIADVVKVPPEEFGKDLKETVKKILMEKYEGRLDKDVGFVLSIVDVKDIGEGKVVHGDGSAYHPVVFETLVYIPEMYELIEGEVVDVVEFGSFVRLGPLDGLIHVSQIMDDYVSYDPKREAII-------GKETGKVLEIGDYVRARIVAISL-----------KAERKRGSKIALTMRQ----PYLGKLEW 175
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|464672|sp|P34087.1|RPB7_YEAST (RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7; AltName: Full=B16) HSP 1 Score: 57.7658 bits (138), Expect = 1.437e-9 Identity = 28/104 (26.92%), Postives = 57/104 (54.81%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCL--FDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLG 102 MF + +L + L S G + L+ ++ +V G +C+ +D ++I + P DG++ +V++R +VF+PF E+++G + SCS+ G ++ +G Sbjct: 1 MFFIKDLSLNITLHPSFFGPRMKQYLKTKLLEEVEGSCTGKFGYILCVLDYDNIDIQRGRILPTDGSAEFNVKYRAVVFKPFKGEVVDGTVVSCSQHGFEVQVG 104
BLAST of EMLSAG00000000471 vs. SwissProt
Match: gi|3334317|sp|O14459.1|RPB7_SCHPO (RecName: Full=DNA-directed RNA polymerase II subunit rpb7; Short=RNA polymerase II subunit B7) HSP 1 Score: 52.7582 bits (125), Expect = 9.929e-8 Identity = 36/135 (26.67%), Postives = 61/135 (45.19%), Query Frame = 0 Query: 2 FVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFD--ILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLG----FFEDIWVPPES----LQNPYRFDEADQV 126 F L EL + L S G + D L+ ++ V G +C+ D ++I V PG G + V++R +++RPF E+++ + + +K G ++G F VPP+ NP + DQV Sbjct: 3 FFLKELSLTISLHPSYFGPRMQDYLKAKLLADVEGTCSGQYGYIICVLDSNTIDIDKGRVVPGQGFAEFEVKYRAVLWRPFRGEVVDAIVTTVNKMGFFANIGPLNVFVSSHLVPPDMKFDPTANPPNYSGEDQV 137
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: XP_394665.1 (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Apis mellifera]) HSP 1 Score: 248.825 bits (634), Expect = 8.487e-84 Identity = 116/201 (57.71%), Postives = 153/201 (76.12%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSD---TSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWW 198 MFVL+ELK VR+P ++ + L DA+ +E+NRK++NKV LNVGL + L DI +I +S++FPGDGASHT V FR +VFRPFMEEI+ GKI+SCS DGV ++LGFFEDI +PP LQ+P RFD+ +Q WVWEY T DG KHDLFMD GE IRFRV S++F++ T PN++ E+SE + PYT+ +++ PGLGL+ WW Sbjct: 1 MFVLAELKDTVRIPPAEFKQKLNDAITDELNRKLANKVYLNVGLCIALHDITKIEESYIFPGDGASHTKVIFRYIVFRPFMEEILIGKIRSCSIDGVHVTLGFFEDIVIPPHKLQHPSRFDQMEQAWVWEYDTGDGEKHDLFMDAGEIIRFRVVSETFTEALPTGPNISGETETSEAKNIS-PYTLGGAIDEPGLGLLTWW 200
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: gb|EEZ99545.1| (DNA-directed RNA polymerase III subunit RPC8-like Protein [Tribolium castaneum]) HSP 1 Score: 248.054 bits (632), Expect = 1.370e-83 Identity = 107/199 (53.77%), Postives = 155/199 (77.89%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWN 199 MF+++E+K++ R+P L DA+ E+N+K++NKVVLNVGL + L+DI + +SF+FPGDGASHT V FR +VFRPF+EEI+ GKI+SCS++GV ++LGFF+DI +PP +LQ+P +F+E +Q WVWEY T DG KHDLFMD GE I+FRVT++ F++T P +E+ + + K+PY++T S+N PGLGL++WW+ Sbjct: 1 MFIVAEMKNVTRIPPELFNLKLNDAIAGELNKKLANKVVLNVGLCIALYDITSLQESFIFPGDGASHTRVSFRYIVFRPFIEEILVGKIRSCSQEGVHVTLGFFDDILIPPSALQHPSKFNETEQAWVWEYDTGDGCKHDLFMDAGETIKFRVTAEFFNETCP-TGSLQETQDKSENKVPYSLTGSINEPGLGLLSWWD 198
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: EEB10445.1 (DNA-directed RNA polymerase III subunit 22.9 kDa polypeptide, putative [Pediculus humanus corporis]) HSP 1 Score: 239.965 bits (611), Expect = 1.957e-80 Identity = 117/200 (58.50%), Postives = 156/200 (78.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNS--EKIPYTITASVNGPGLGLINWW 198 MFVL+E+K +R+ K L DA+ EEIN+K++NKVV+NVGL++ L+DI E+GDS + PGDG HT V FR +VFRPF+ EI+ GK+KSCS++GV ++LGFF+DI +P +LQ+P RFDEA+QVWVWEY D KHDLFMD GE IRFRVT+++F +TSP V P E SS+ +S K+PY++TAS+N PGLGL++WW Sbjct: 1 MFVLAEIKDYIRISPCNFHKPLKDAISEEINKKLANKVVMNVGLSIALWDISELGDSHIIPGDGCFHTRVCFRYVVFRPFLTEILVGKVKSCSQEGVVVTLGFFDDIIIPSSALQHPSRFDEAEQVWVWEYQV-DEEKHDLFMDIGEPIRFRVTAETFEETSP-VGP-ENSSDGDSVETKVPYSLTASINEPGLGLMSWW 197
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: EAA00210.3 (AGAP012122-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 238.039 bits (606), Expect = 5.932e-79 Identity = 112/213 (52.58%), Postives = 152/213 (71.36%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEE---------------SSEPNSEKIPYTITASVNGPGLGLINWW 198 MFVL+ELK VR+ G LP+A+++EINRK++NKV+LNVGL + L DI+++GDS + PGDGASHT V FR +VFRP + ++I GKI+SCS++GV I+LGFF+DI +PP +LQ+P R++EA+Q WVWEYP EDG HDL+MD GE I+FRV+ + F ++SP P +E SS S K PY I A++N GLGL++WW Sbjct: 1 MFVLAELKDNVRIAPELFGLKLPEAIKDEINRKLANKVLLNVGLCIALKDIVKLGDSIILPGDGASHTEVNFRYIVFRPMIGDVITGKIRSCSREGVHITLGFFDDILIPPSALQHPSRYEEAEQAWVWEYPLEDGNTHDLYMDIGENIKFRVSGEVFEESSPIGPPDQEVPSSSTGASTSGGAGSSGQESNKTPYRIVAAINESGLGLLSWW 213
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: gb|EEC11553.1| (DNA-directed RNA polymerase subunit E', putative [Ixodes scapularis]) HSP 1 Score: 229.565 bits (584), Expect = 2.739e-76 Identity = 106/201 (52.74%), Postives = 154/201 (76.62%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNS--EKIPYTITASVNGPGLGLINWWN 199 MFV+SE+ +R+P + DA+ E++NR+++NKVV+NVGL + LFD+ +I DS + PGDG+ HT V+FR +VFRPFM+E++ GKI+SCS++GV +S+GFF+DI +PP++LQ+P RFDEA+Q+WVWEY ++D KHD+FMD GE+IRFRV +++F DTSP E SE S ++IPY++T S++ GLGL+ WW Sbjct: 1 MFVISEMSDNIRIPPWLFRLNPNDAIVEQLNRRLANKVVINVGLCIALFDVTKIEDSKILPGDGSFHTTVEFRYVVFRPFMDEVLVGKIRSCSQEGVYVSMGFFDDILIPPDALQHPSRFDEAEQLWVWEYESDD-KKHDMFMDLGEQIRFRVVAETFVDTSPVGPEMAEMSENESKEKRIPYSLTGSISESGLGLLKWWT 200
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: AGB94414.1 (CG7339, isoform B [Drosophila melanogaster]) HSP 1 Score: 229.18 bits (583), Expect = 1.295e-75 Identity = 108/213 (50.70%), Postives = 145/213 (68.08%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSE--------------KIPYTITASVNGPGLGLINWWN 199 MFVL+ELK VR+ Q L DA+R+EI+RK++NKV+LNVGL + L DI+ + DS + PGDGASHT V FR +VFRP + +I GKI++CS++GV ++LGFF+DI +P +LQ+P RFDEA+Q WVWEYP EDG KHDLFMD GE I+FRV+ + F +TSP P E+ K PY I ++N GLG+++WW+ Sbjct: 1 MFVLAELKDNVRIAPDQFHLKLVDAVRDEIDRKLANKVLLNVGLCIALKDIVSLKDSIILPGDGASHTEVLFRYVVFRPMVGTVITGKIRNCSREGVHVTLGFFDDILIPHAALQHPSRFDEAEQAWVWEYPLEDGAKHDLFMDVGEPIKFRVSREIFEETSPIGPPKTEAQTQQGASTSAAVASATSQEVKTPYRIIGAINESGLGVLSWWD 213
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: AAF50032.1 (CG7339, isoform A [Drosophila melanogaster]) HSP 1 Score: 229.18 bits (583), Expect = 1.295e-75 Identity = 108/213 (50.70%), Postives = 145/213 (68.08%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSE--------------KIPYTITASVNGPGLGLINWWN 199 MFVL+ELK VR+ Q L DA+R+EI+RK++NKV+LNVGL + L DI+ + DS + PGDGASHT V FR +VFRP + +I GKI++CS++GV ++LGFF+DI +P +LQ+P RFDEA+Q WVWEYP EDG KHDLFMD GE I+FRV+ + F +TSP P E+ K PY I ++N GLG+++WW+ Sbjct: 1 MFVLAELKDNVRIAPDQFHLKLVDAVRDEIDRKLANKVLLNVGLCIALKDIVSLKDSIILPGDGASHTEVLFRYVVFRPMVGTVITGKIRNCSREGVHVTLGFFDDILIPHAALQHPSRFDEAEQAWVWEYPLEDGAKHDLFMDVGEPIKFRVSREIFEETSPIGPPKTEAQTQQGASTSAAVASATSQEVKTPYRIIGAINESGLGVLSWWD 213
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: EFX89005.1 (hypothetical protein DAPPUDRAFT_41099 [Daphnia pulex]) HSP 1 Score: 225.328 bits (573), Expect = 1.725e-74 Identity = 106/204 (51.96%), Postives = 153/204 (75.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSP----NVAPTEESSEP--NSEKIPYTITASVNGPGLGLINWW 198 MFVL+ +K VR+P+ + + + A+ EE+N K +NKVVL+VGL + L+DI++ G+SF+ PGD HT V+FR +VFRPFME+I+ G+IK+C K+ VQ+SLGFF++I++ E+LQ RFDE +Q WVWEY +ED GKHDLFMD GEEIRF+V ++ F+DT+P N AP + S +P +++++ Y I AS+N GLGL++WW Sbjct: 1 MFVLALVKQTVRVPSEKFNRDIDQAISEELNLKFANKVVLDVGLCIALWDIIKRGESFILPGDSGHHTKVEFRYVVFRPFMEQILVGRIKNCDKESVQVSLGFFDEIFISSENLQKNSRFDETEQTWVWEYQSED-GKHDLFMDTGEEIRFKVVAEYFADTTPSGPSNEAP-DSSLDPIRDNKRMAYRINASINESGLGLLSWW 202
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Match: gb|KFM81263.1| (DNA-directed RNA polymerase III subunit RPC8, partial [Stegodyphus mimosarum]) HSP 1 Score: 212.616 bits (540), Expect = 1.260e-69 Identity = 101/201 (50.25%), Postives = 142/201 (70.65%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGK-HDLFMDPGEEIRFRVTSQSFSD-TSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWN 199 MF L E+K VR+ + K L DA+ +E+ K +NKVV+NVGL + LF+I ++ +S++FPGDGASHT V F +VFRPFM EI+ GKI+SCS++GV +S+GFF+DI +P + LQ+P RFDE +Q+WVW + E+ G+ HDLFMD E IRFRV ++F D T + +E +IPY +T S+N PGLGL++WW+ Sbjct: 1 MFTLVEMKDTVRIRPWRFHKPLQDAIADELRLKFANKVVMNVGLCIALFEITKLEESYIFPGDGASHTGVYFSYIVFRPFMNEILVGKIRSCSREGVHVSIGFFDDILIPQDVLQHPSRFDEKEQLWVWVFSNEESGQTHDLFMDRDEPIRFRVIDETFVDTTPTSPETETSDAEEKDRRIPYNLTGSINEPGLGLLSWWS 201
BLAST of EMLSAG00000000471 vs. nr
Match: gi|290562083|gb|ADD38438.1| (DNA-directed RNA polymerase III subunit RPC8 [Lepeophtheirus salmonis]) HSP 1 Score: 410.223 bits (1053), Expect = 5.874e-145 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT Sbjct: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200
BLAST of EMLSAG00000000471 vs. nr
Match: gi|225719760|gb|ACO15726.1| (DNA-directed RNA polymerase III subunit RPC8 [Caligus clemensi]) HSP 1 Score: 342.043 bits (876), Expect = 4.948e-118 Identity = 163/203 (80.30%), Postives = 185/203 (91.13%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEES---SEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVLSE+KSL+RLPA QL + LP+AL EEINRK+SNKVVLNVGLAVCLFDILEIG+SF+FPGD ASHT V FR+LVFRPFMEE++NGKIKSCSKDGVQ+SLGFFEDIW+PPESLQ+PYRFDEADQVWVWEYPTEDG KHDLFMD GEEIRFRVT++SF DTSPNV P ES +P+S+K+PY+ITASVN PGLGL++WWNT Sbjct: 1 MFVLSEVKSLIRLPALQLNRPLPEALSEEINRKLSNKVVLNVGLAVCLFDILEIGESFLFPGDEASHTRVVFRILVFRPFMEEVLNGKIKSCSKDGVQVSLGFFEDIWIPPESLQHPYRFDEADQVWVWEYPTEDGEKHDLFMDTGEEIRFRVTAESFIDTSPNVDPNPESRSTQQPDSDKLPYSITASVNEPGLGLLSWWNT 203
BLAST of EMLSAG00000000471 vs. nr
Match: gi|225711416|gb|ACO11554.1| (DNA-directed RNA polymerase III subunit RPC8 [Caligus rogercresseyi]) HSP 1 Score: 339.347 bits (869), Expect = 7.106e-117 Identity = 161/201 (80.10%), Postives = 184/201 (91.54%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEE-SSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVLSE KSL+RLPA LG++LP+AL EEINRK+SN+VV NVGLAVCLFDILEIG+SF+FPGDGASHT V FR+LVFRPFMEE+INGKIKSCSKDGVQ+SLGFFEDIW+PPE+LQ+PYRFDEADQVWVWEYPTEDG KHDLFMDPGEEIRFRVT+++FSDTSPNV P E S +++KIPYTI+ASVN PGLGL +WWN+ Sbjct: 1 MFVLSECKSLIRLPALHLGRNLPEALSEEINRKLSNRVVHNVGLAVCLFDILEIGESFLFPGDGASHTRVNFRILVFRPFMEEVINGKIKSCSKDGVQVSLGFFEDIWIPPEALQHPYRFDEADQVWVWEYPTEDGEKHDLFMDPGEEIRFRVTAETFSDTSPNVDPNAEGQSGESNDKIPYTISASVNEPGLGLHSWWNS 201
BLAST of EMLSAG00000000471 vs. nr
Match: gi|225711736|gb|ACO11714.1| (DNA-directed RNA polymerase III subunit RPC8 [Caligus rogercresseyi]) HSP 1 Score: 302.368 bits (773), Expect = 5.118e-102 Identity = 141/170 (82.94%), Postives = 158/170 (92.94%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEE 170 MFVLSE KSL+RLPA LG++LP+AL EEINRK+SN+VV NVGLAVCLFDILEIG+SF+ PGDGASHT V FR+LVFRPFMEE+INGKIKSCSKDGVQ+SLGFFEDIW+PPE+LQ+PYRFDEADQVWVWEYPTEDG KHDLFMDPGEEIRFRVT+++FSDTSPNV P E Sbjct: 1 MFVLSECKSLIRLPALHLGRNLPEALSEEINRKLSNRVVHNVGLAVCLFDILEIGESFLSPGDGASHTRVNFRILVFRPFMEEVINGKIKSCSKDGVQVSLGFFEDIWIPPEALQHPYRFDEADQVWVWEYPTEDGEKHDLFMDPGEEIRFRVTAETFSDTSPNVDPNAE 170
BLAST of EMLSAG00000000471 vs. nr
Match: gi|1133418507|ref|XP_019864765.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Aethina tumida]) HSP 1 Score: 254.988 bits (650), Expect = 1.531e-83 Identity = 111/201 (55.22%), Postives = 159/201 (79.10%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPT--EESSEPNSEKIPYTITASVNGPGLGLINWWN 199 MF+L+E+K++ R+P L +A+ E+N+K++NKVVLNVGL + L+DI+ + +S++FPGDGASHT V FR +VFRPF+EEII GKI+SCS++GV ++LGFF+DI +PP +LQ+P +F+E +Q WVWEY T DG KHDLFMD GE IRFRVT+++F++T P P +E+ E + K+PY++TAS+N PGLGL++WW+ Sbjct: 1 MFILAEMKNVTRIPPELFNLKLNEAIAGELNKKLANKVVLNVGLCIALYDIVSLQESYIFPGDGASHTRVNFRYIVFRPFVEEIIIGKIRSCSQEGVHVTLGFFDDILIPPSALQHPSKFNETEQAWVWEYDTGDGNKHDLFMDAGETIRFRVTAETFNETCPTGGPGTFQETQENHETKVPYSLTASINEPGLGLLSWWD 201
BLAST of EMLSAG00000000471 vs. nr
Match: gi|646707949|gb|KDR14462.1| (DNA-directed RNA polymerase III subunit RPC8 [Zootermopsis nevadensis]) HSP 1 Score: 253.447 bits (646), Expect = 6.513e-83 Identity = 114/204 (55.88%), Postives = 154/204 (75.49%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSE------KIPYTITASVNGPGLGLINWW 198 MFVL+E+K ++R P L DA+ EE+N+K++NKVVLNVGL + L DI ++ DS++FPGDGA+HT V FR +VFRPF+EE+I GKI+SCS++GV ++LGFF+DI +PP +LQ+P RFDE +Q WVWEY T DG KHDLFMDPGE IRFRVT+++F +TSP+ + + P E K+PY +T S+N GLGL++WW Sbjct: 1 MFVLAEMKHVIRTPPHIFHLKLNDAIAEELNKKLANKVVLNVGLCIALHDITQLEDSYIFPGDGAAHTKVNFRYVVFRPFIEEVITGKIRSCSREGVHVTLGFFDDIIIPPNALQHPSRFDETEQAWVWEYNTGDGDKHDLFMDPGETIRFRVTAETFVETSPSGPENTDITTPGGETSAEEPKVPYMLTGSINESGLGLLSWW 204
BLAST of EMLSAG00000000471 vs. nr
Match: gi|591305537|ref|XP_007079512.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Panthera tigris altaica] >gi|591305539|ref|XP_007079513.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Panthera tigris altaica]) HSP 1 Score: 253.062 bits (645), Expect = 9.429e-83 Identity = 118/204 (57.84%), Postives = 154/204 (75.49%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSP----NVAPTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP + T S EP ++ PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFDDILIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPTGPGSAEATSSSEEPPKKEAPYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. nr
Match: gi|543263003|ref|XP_005421928.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 isoform X1 [Geospiza fortis]) HSP 1 Score: 253.062 bits (645), Expect = 1.019e-82 Identity = 116/205 (56.59%), Postives = 157/205 (76.59%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNS------EKIPYTITASVNGPGLGLINWWN 199 MFVL E+ VR+P Q + L +++ EE+N+K++NKVV NVGL +CL+DI ++ DS++FPGDGASHT V FR +VFRPF++EI+ G+IKSCS+DGV +SLGFF+DI +PPESLQ P +FDEA+QVWVWEY TE+G HDL+MD GEEIRFRV ++F DTSP + E+S N+ ++ PYT+ S++ PGLGL++WW Sbjct: 1 MFVLVEMTDTVRIPPWQFERKLNESIAEELNKKLANKVVYNVGLCICLYDITKLEDSYIFPGDGASHTKVHFRYVVFRPFLDEILIGQIKSCSQDGVHVSLGFFDDIVIPPESLQQPAKFDEAEQVWVWEYETEEGA-HDLYMDIGEEIRFRVVDETFVDTSPTGPSSAEASTSNAAEEVQKKEAPYTLVGSISEPGLGLLSWWT 204
BLAST of EMLSAG00000000471 vs. nr
Match: gi|558168892|ref|XP_006098584.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Myotis lucifugus] >gi|558168896|ref|XP_006098585.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Myotis lucifugus]) HSP 1 Score: 251.906 bits (642), Expect = 2.119e-82 Identity = 118/204 (57.84%), Postives = 154/204 (75.49%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEE----SSEPNSEKIPYTITASVNGPGLGLINWWNT 200 MFVL E+ VR+P Q + L D++ EE+N+K++NKVV NVGL +CLFDI ++ D++VFPGDGASHT V FR +VF PF++EI+ GKIK CS +GV +SLGFFEDI +PPESLQ P +FD+A+QVWVWEY TE+G HDL+MD GEEIRFRV +SF DTSP + E S EP ++ PYT+ S++ PGLGL++WW + Sbjct: 1 MFVLVEMVDTVRIPPWQFERKLNDSIAEELNKKLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRYVVFHPFLDEILIGKIKGCSPEGVHVSLGFFEDILIPPESLQQPAKFDDAEQVWVWEYETEEGA-HDLYMDTGEEIRFRVVDESFVDTSPTGPSSAEVASTSEEPPKKEAPYTLVGSISEPGLGLLSWWTS 203
BLAST of EMLSAG00000000471 vs. nr
Match: gi|1080056514|ref|XP_018570002.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Anoplophora glabripennis]) HSP 1 Score: 251.906 bits (642), Expect = 2.603e-82 Identity = 110/200 (55.00%), Postives = 156/200 (78.00%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDALREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGDGASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNVAPTEESSEPNSE-KIPYTITASVNGPGLGLINWWN 199 MF+L+E+K++ R+P L DA+ E+N+K++NKVVLNVGL + LFDI+ + + F+FPGDGASHT V FR +VFRPF+EE++ GKI+SCS++GV ++LGFF+DI +PP +LQ+P +F+E +Q WVWEY T DG KHDLFMD GE IRFRVT++ F++T P T + ++ N E K+PY++T S+N PGLGL++WW+ Sbjct: 1 MFILAEMKNVTRIPPELFNLKLNDAIAGELNKKLANKVVLNVGLCIALFDIVSLQECFIFPGDGASHTRVTFRYIVFRPFIEEVLIGKIRSCSQEGVHVTLGFFDDILIPPSALQHPSKFNETEQAWVWEYDTGDGSKHDLFMDAGESIRFRVTAEVFNETCPTGPATMQENQENVENKVPYSLTGSINEPGLGLLSWWD 200
BLAST of EMLSAG00000000471 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold50_size457468-processed-gene-0.1 (protein:Tk03198 transcript:snap_masked-scaffold50_size457468-processed-gene-0.1-mRNA-1 annotation:"dna-directed rna polymerase iii subunit rpc8") HSP 1 Score: 202.986 bits (515), Expect = 2.269e-65 Identity = 108/232 (46.55%), Postives = 145/232 (62.50%), Query Frame = 0 Query: 1 MFVLSELKSLVRLPASQLGKSLPDA----------------------------------LREEINRKVSNKVVLNVGLAVCLFDILEIGDSFVFPGD--GASHTHVQFRLLVFRPFMEEIINGKIKSCSKDGVQISLGFFEDIWVPPESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNV---------APTEESSEPNSEKIPYTITASV 187 MF+LS L SLVR+ S+ + LP+A L + +N +++NKVV +GL + ++D++ IGDS++ P D GASHT V FR++VFRPF+EE++ GKIKSC++ GV +SLGFF+DI + PE+LQ+P RFDE +QVWVWEYPT D G HD+FMDPGE IRFRV S+ F DTSP+ A + SEP +KIPY + ASV Sbjct: 1 MFILSRLSSLVRIVPSEWKRPLPEAPSDGDGRGQVRPEAEDRSLEAQALTPRADLMRWALTDALNVQLANKVVFELGLVLSVYDLVSIGDSYLLPMDLEGASHTRVTFRVVVFRPFVEEVLQGKIKSCTRQGVFVSLGFFDDILIKPEALQHPKRFDETEQVWVWEYPT-DEGHHDMFMDPGETIRFRVISEHFVDTSPSAPDLHPKDPSAALAQGSEPEDKKIPYLLHASV 231 HSP 2 Score: 103.99 bits (258), Expect = 3.632e-27 Identity = 54/99 (54.55%), Postives = 64/99 (64.65%), Query Frame = 0 Query: 111 PESLQNPYRFDEADQVWVWEYPTEDGGKHDLFMDPGEEIRFRVTSQSFSDTSPNV---------APTEESSEPNSEKIPYTITASVNGPGLGLINWWNT 200 PE + PY + VWVWEYPT D G HD+FMDPGE IRFRV S+ F DTSP+ A + SEP +KIPY + ASVN PGLGLI+WWN+ Sbjct: 218 PEDKKIPYLLHAS--VWVWEYPT-DEGHHDMFMDPGETIRFRVISEHFVDTSPSAPDLHPKDPSAALAQGSEPEDKKIPYLLHASVNEPGLGLISWWNS 313 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000471 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000000471 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 6
BLAST of EMLSAG00000000471 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000471 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 10
BLAST of EMLSAG00000000471 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 9
BLAST of EMLSAG00000000471 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000471 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s106:813843..814445+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000471-683237 ID=EMLSAG00000000471-683237|Name=EMLSAG00000000471|organism=Lepeophtheirus salmonis|type=gene|length=603bp|location=Sequence derived from alignment at LSalAtl2s106:813843..814445+ (Lepeophtheirus salmonis)back to top Add to Basket
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