EMLSAG00000000511, EMLSAG00000000511-683277 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000511 vs. GO
Match: - (symbol:TMPRSS15 "Enteropeptidase" species:9823 "Sus scrofa" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005044 "scavenger receptor activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] InterPro:IPR000998 InterPro:IPR001190 InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR002172 InterPro:IPR009003 InterPro:IPR017448 InterPro:IPR018114 Pfam:PF00057 Pfam:PF00089 Pfam:PF00530 Pfam:PF00629 PRINTS:PR00020 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS00420 PROSITE:PS00740 PROSITE:PS50060 PROSITE:PS50068 PROSITE:PS50240 PROSITE:PS50287 SMART:SM00020 SMART:SM00137 SMART:SM00192 SMART:SM00202 GO:GO:0016020 GO:GO:0006508 GO:GO:0004252 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0005044 GO:GO:0006898 SUPFAM:SSF50494 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 OrthoDB:EOG7RNK07 SUPFAM:SSF56487 TreeFam:TF351678 GeneTree:ENSGT00730000110471 OMA:FEDGFCF EMBL:CU856297 EMBL:CU914795 Ensembl:ENSSSCT00000013150 Uniprot:F1SHP8) HSP 1 Score: 47.3654 bits (111), Expect = 1.215e-4 Identity = 31/137 (22.63%), Postives = 62/137 (45.26%), Query Frame = 0 Query: 144 ACGRNTQNRPCDDGYVGTKIEDDIIIPWFAILVYSYTYKYSVKKPIYVRCGATILNQNWLISSVACFFQNGRKAVFGEMEAIMGTYVVDKIGIPTITTKIKDVVTI---------EESISLYKLEKPIQHYTSFMSP 271 +CG+ + VG + PW L Y+ + CGA++++++WL+S+ C + GR + +AI+G ++ + P I T++ D + I + I++ LE + +YT ++ P Sbjct: 623 SCGKKQVAQEVSPKIVGGNDSREGAWPWVVALYYNGQ----------LLCGASLVSRDWLVSAAHCVY--GRNLEPSKWKAILGLHMTSNLTSPQIVTRLIDEIVINPHYNRRRKDSDIAMMHLEFKV-NYTDYIQP 746
BLAST of EMLSAG00000000511 vs. GO
Match: - (symbol:TMPRSS15 "Enteropeptidase" species:9823 "Sus scrofa" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005044 "scavenger receptor activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR000998 InterPro:IPR001190 InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR002172 InterPro:IPR009003 InterPro:IPR011163 InterPro:IPR017448 InterPro:IPR018114 Pfam:PF00057 Pfam:PF00089 Pfam:PF00530 Pfam:PF00629 PIRSF:PIRSF001138 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS00420 PROSITE:PS00740 PROSITE:PS50060 PROSITE:PS50068 PROSITE:PS50240 PROSITE:PS50287 SMART:SM00020 SMART:SM00137 SMART:SM00192 SMART:SM00202 GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0005044 GO:GO:0006898 SUPFAM:SSF50494 eggNOG:COG5640 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 Gene3D:3.30.70.960 InterPro:IPR000082 Pfam:PF01390 SMART:SM00200 SUPFAM:SSF82671 PROSITE:PS50024 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 SUPFAM:SSF56487 MEROPS:S01.156 CTD:5651 HOGENOM:HOG000112380 HOVERGEN:HBG005588 KO:K01316 EMBL:D30799 PIR:A53663 RefSeq:NP_001001259.1 UniGene:Ssc.298 ProteinModelPortal:P98074 SMR:P98074 STRING:9823.ENSSSCP00000012801 GeneID:397152 KEGG:ssc:397152 Uniprot:P98074) HSP 1 Score: 46.9802 bits (110), Expect = 1.347e-4 Identity = 31/137 (22.63%), Postives = 62/137 (45.26%), Query Frame = 0 Query: 144 ACGRNTQNRPCDDGYVGTKIEDDIIIPWFAILVYSYTYKYSVKKPIYVRCGATILNQNWLISSVACFFQNGRKAVFGEMEAIMGTYVVDKIGIPTITTKIKDVVTI---------EESISLYKLEKPIQHYTSFMSP 271 +CG+ + VG + PW L Y+ + CGA++++++WL+S+ C + GR + +AI+G ++ + P I T++ D + I + I++ LE + +YT ++ P Sbjct: 786 SCGKKQVAQEVSPKIVGGNDSREGAWPWVVALYYNGQ----------LLCGASLVSRDWLVSAAHCVY--GRNLEPSKWKAILGLHMTSNLTSPQIVTRLIDEIVINPHYNRRRKDSDIAMMHLEFKV-NYTDYIQP 909
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592780579|gb|GAXK01173989.1| (TSA: Calanus finmarchicus comp5323785_c0_seq1 transcribed RNA sequence) HSP 1 Score: 39.6614 bits (91), Expect = 2.122e-3 Identity = 28/118 (23.73%), Postives = 47/118 (39.83%), Query Frame = 0 Query: 112 YYSCISSIDESKTWCYT-DIEENWDFCDQTTCFACGRNTQNRPCDDGYVGTKI-------EDDIIIPWFAILXXXXXXXXXXXXPIYVRCGATILNQNWLISSVACFFQNGRKAVFGE 221 + C + WCYT D + W+ CD C C + + C G ++I ED+ PW L +CG TI+N+ W++++ C Q+ ++ E Sbjct: 11 HNQCRNPDGTPGAWCYTTDKNKRWELCDVRQCVDCDKAISCK-CGLGARSSRIVNGKPTTEDEH--PWMVGLAKEG---------FTSQCGGTIINKEWVLTAAHCVLQDKKEPKCNE 328
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592838854|gb|GAXK01118690.1| (TSA: Calanus finmarchicus comp1091284_c0_seq1 transcribed RNA sequence) HSP 1 Score: 36.965 bits (84), Expect = 5.480e-2 Identity = 19/54 (35.19%), Postives = 26/54 (48.15%), Query Frame = 0 Query: 96 TIKGVKCRFPAIY-GKTYYSCISSIDESKTWCYT---------DIEENWDFCDQ 139 TI G++C P +Y K + C+ + K WC T D +NWDFC Q Sbjct: 839 TIHGIECVLPFLYKDKLWTDCVHLWTDRKPWCATSVAVGKQFLDTGDNWDFCGQ 1000
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592938806|gb|GAXK01019747.1| (TSA: Calanus finmarchicus comp433131_c1_seq3 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 6.366e-2 Identity = 24/70 (34.29%), Postives = 31/70 (44.29%), Query Frame = 0 Query: 67 LINSIFFQVEVCYSENSQEIQTTNEDP--CKTIKGVKCRFPAIY-GKTYYSCISSIDESKTWCYTDIEEN 133 L+ S Q S+ E + P C TI G KC FP Y G +Y C + D WC T++E N Sbjct: 254 LLTSSLAQCSAKTSQLQPEGSLNSRSPTLCTTISGTKCVFPFTYQGIEHYVCTYA-DSPTPWCATELESN 460
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592795180|gb|GAXK01159388.1| (TSA: Calanus finmarchicus comp4826778_c0_seq1 transcribed RNA sequence) HSP 1 Score: 36.5798 bits (83), Expect = 6.872e-2 Identity = 23/70 (32.86%), Postives = 36/70 (51.43%), Query Frame = 0 Query: 90 NEDPCKTIKGVKCRFPAIYGKTYYSCISSIDESKTWCYTDIEEN-----WDFCDQTTCFACGR-NTQNRP 153 NE CKTIKG C FP + Y+ + +S WC T + ++ W +C+ ++C G +T+N P Sbjct: 224 NEAKCKTIKGTDCVFPFVSDSKEYNVCAQWKKS-FWCATAVGDDNTFTTWAYCELSSCPLEGESSTENTP 430
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592776688|gb|GAXK01177880.1| (TSA: Calanus finmarchicus comp15319_c2_seq10 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 1.012e-1 Identity = 17/49 (34.69%), Postives = 26/49 (53.06%), Query Frame = 0 Query: 101 KCRFPAIYGKTYYSCISSIDESKT-WCYTDIEE------NWDFCDQTTC 142 C FP ++G + ++ID T WC T ++E W+FC+ TTC Sbjct: 927 NCIFPFVFGGRIHDTCTTIDGDATPWCATSVDEFGNYGGTWEFCNSTTC 1073
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592776689|gb|GAXK01177879.1| (TSA: Calanus finmarchicus comp15319_c2_seq9 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 1.028e-1 Identity = 17/49 (34.69%), Postives = 26/49 (53.06%), Query Frame = 0 Query: 101 KCRFPAIYGKTYYSCISSIDESKT-WCYTDIEE------NWDFCDQTTC 142 C FP ++G + ++ID T WC T ++E W+FC+ TTC Sbjct: 974 NCIFPFVFGGRIHDTCTTIDGDATPWCATSVDEFGNYGGTWEFCNSTTC 1120
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592776690|gb|GAXK01177878.1| (TSA: Calanus finmarchicus comp15319_c2_seq8 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 1.120e-1 Identity = 17/49 (34.69%), Postives = 26/49 (53.06%), Query Frame = 0 Query: 101 KCRFPAIYGKTYYSCISSIDESKT-WCYTDIEE------NWDFCDQTTC 142 C FP ++G + ++ID T WC T ++E W+FC+ TTC Sbjct: 1318 NCIFPFVFGGRIHDTCTTIDGDATPWCATSVDEFGNYGGTWEFCNSTTC 1464
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592844691|gb|GAXK01112853.1| (TSA: Calanus finmarchicus comp2689420_c0_seq1 transcribed RNA sequence) HSP 1 Score: 35.8094 bits (81), Expect = 1.374e-1 Identity = 25/69 (36.23%), Postives = 33/69 (47.83%), Query Frame = 0 Query: 81 ENSQE--IQTTNEDPCKTIKGVKCRFPAIYGKTYYSCISSIDESKTWCYTDIE-----ENWDFCDQTTC 142 ENS E QTT CKT++G C FP + G + +S WC T + + W+ CD TTC Sbjct: 56 ENSTENSAQTT----CKTLEGNTCVFPFLEGTQRHEKCASWKSKYKWCATSLNPDLTYKTWEKCDMTTC 250
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592953403|gb|GAXK01005150.1| (TSA: Calanus finmarchicus comp1528670_c0_seq1 transcribed RNA sequence) HSP 1 Score: 35.8094 bits (81), Expect = 1.787e-1 Identity = 22/73 (30.14%), Postives = 31/73 (42.47%), Query Frame = 0 Query: 94 CKTIKGVKCRFPAIY-GKTYYSCISSIDESKTWCYT------DIEENWDFCDQTTCFACGRNTQNRPCDDGYV 159 CKT+ +CRFP Y K Y C + K WC T E+W +C+ T G + C +G + Sbjct: 1264 CKTVGQKQCRFPFEYNNKMYTGCTDRNNAGKYWCRTTSTSKPGSSEDWGYCEATCTTNEGETIGDTECREGEI 1482
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592947967|gb|GAXK01010586.1| (TSA: Calanus finmarchicus comp746614_c0_seq3 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 2.440e-1 Identity = 26/121 (21.49%), Postives = 46/121 (38.02%), Query Frame = 0 Query: 125 WCYTDIE-------ENWDFCDQTTCF------ACGRNTQNRPCDDGYVGTKIEDDIIIPWFAILXXXXXXXXXXXXPIYVRCGATILNQNWLISSVACFFQNGRKAV---FGEMEAIMGTY 229 WC T+ + + W CD C CGR QNR +G K PW A L CG T++ W++++ C ++ + + G+++ ++G + Sbjct: 8 WCATETDTDGNHGTDKWGNCDCRNCACSTEGCKCGRAKQNR-----ILGGKEAKVNAYPWMAALANQQEA---------FYCGGTLVASEWVVTASHCLSEDRAQTIPTPPGKLKIVLGEH 328
BLAST of EMLSAG00000000511 vs. L. salmonis peptides
Match: EMLSAP00000000511 (pep:novel supercontig:LSalAtl2s:LSalAtl2s107:679593:681950:-1 gene:EMLSAG00000000511 transcript:EMLSAT00000000511 description:"maker-LSalAtl2s107-snap-gene-5.21") HSP 1 Score: 595.89 bits (1535), Expect = 0.000e+0 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0 Query: 1 MTYKTGTKVLQSQECDTSNSKYLCTNNTNNFPKNALIGGSLVMNINGHCTLVEMLFEQRPFLVFWTLINSIFFQVEVCYSENSQEIQTTNEDPCKTIKGVKCRFPAIYGKTYYSCISSIDESKTWCYTDIEENWDFCDQTTCFACGRNTQNRPCDDGYVGTKIEDDIIIPWFAILVYSYTYKYSVKKPIYVRCGATILNQNWLISSVACFFQNGRKAVFGEMEAIMGTYVVDKIGIPTITTKIKDVVTIEESISLYKLEKPIQHYTSFMSPSNSTSFDNFSSGFDEYN 288 MTYKTGTKVLQSQECDTSNSKYLCTNNTNNFPKNALIGGSLVMNINGHCTLVEMLFEQRPFLVFWTLINSIFFQVEVCYSENSQEIQTTNEDPCKTIKGVKCRFPAIYGKTYYSCISSIDESKTWCYTDIEENWDFCDQTTCFACGRNTQNRPCDDGYVGTKIEDDIIIPWFAILVYSYTYKYSVKKPIYVRCGATILNQNWLISSVACFFQNGRKAVFGEMEAIMGTYVVDKIGIPTITTKIKDVVTIEESISLYKLEKPIQHYTSFMSPSNSTSFDNFSSGFDEYN Sbjct: 1 MTYKTGTKVLQSQECDTSNSKYLCTNNTNNFPKNALIGGSLVMNINGHCTLVEMLFEQRPFLVFWTLINSIFFQVEVCYSENSQEIQTTNEDPCKTIKGVKCRFPAIYGKTYYSCISSIDESKTWCYTDIEENWDFCDQTTCFACGRNTQNRPCDDGYVGTKIEDDIIIPWFAILVYSYTYKYSVKKPIYVRCGATILNQNWLISSVACFFQNGRKAVFGEMEAIMGTYVVDKIGIPTITTKIKDVVTIEESISLYKLEKPIQHYTSFMSPSNSTSFDNFSSGFDEYN 288 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000511 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 2
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000000511 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000511 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000511 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000511 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000511 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s107:679593..681950- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000511-683277 ID=EMLSAG00000000511-683277|Name=EMLSAG00000000511|organism=Lepeophtheirus salmonis|type=gene|length=2358bp|location=Sequence derived from alignment at LSalAtl2s107:679593..681950- (Lepeophtheirus salmonis)back to top Add to Basket
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