EMLSAG00000000511, EMLSAG00000000511-683277 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000511 vs. GO
Match: - (symbol:TMPRSS15 "Enteropeptidase" species:9823 "Sus scrofa" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005044 "scavenger receptor activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] InterPro:IPR000998 InterPro:IPR001190 InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR002172 InterPro:IPR009003 InterPro:IPR017448 InterPro:IPR018114 Pfam:PF00057 Pfam:PF00089 Pfam:PF00530 Pfam:PF00629 PRINTS:PR00020 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS00420 PROSITE:PS00740 PROSITE:PS50060 PROSITE:PS50068 PROSITE:PS50240 PROSITE:PS50287 SMART:SM00020 SMART:SM00137 SMART:SM00192 SMART:SM00202 GO:GO:0016020 GO:GO:0006508 GO:GO:0004252 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0005044 GO:GO:0006898 SUPFAM:SSF50494 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 OrthoDB:EOG7RNK07 SUPFAM:SSF56487 TreeFam:TF351678 GeneTree:ENSGT00730000110471 OMA:FEDGFCF EMBL:CU856297 EMBL:CU914795 Ensembl:ENSSSCT00000013150 Uniprot:F1SHP8) HSP 1 Score: 47.3654 bits (111), Expect = 1.215e-4 Identity = 31/137 (22.63%), Postives = 62/137 (45.26%), Query Frame = 0 Query: 144 ACGRNTQNRPCDDGYVGTKIEDDIIIPWFAILVYSYTYKYSVKKPIYVRCGATILNQNWLISSVACFFQNGRKAVFGEMEAIMGTYVVDKIGIPTITTKIKDVVTI---------EESISLYKLEKPIQHYTSFMSP 271 +CG+ + VG + PW L Y+ + CGA++++++WL+S+ C + GR + +AI+G ++ + P I T++ D + I + I++ LE + +YT ++ P Sbjct: 623 SCGKKQVAQEVSPKIVGGNDSREGAWPWVVALYYNGQ----------LLCGASLVSRDWLVSAAHCVY--GRNLEPSKWKAILGLHMTSNLTSPQIVTRLIDEIVINPHYNRRRKDSDIAMMHLEFKV-NYTDYIQP 746
BLAST of EMLSAG00000000511 vs. GO
Match: - (symbol:TMPRSS15 "Enteropeptidase" species:9823 "Sus scrofa" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005044 "scavenger receptor activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR000998 InterPro:IPR001190 InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR002172 InterPro:IPR009003 InterPro:IPR011163 InterPro:IPR017448 InterPro:IPR018114 Pfam:PF00057 Pfam:PF00089 Pfam:PF00530 Pfam:PF00629 PIRSF:PIRSF001138 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS00420 PROSITE:PS00740 PROSITE:PS50060 PROSITE:PS50068 PROSITE:PS50240 PROSITE:PS50287 SMART:SM00020 SMART:SM00137 SMART:SM00192 SMART:SM00202 GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0005044 GO:GO:0006898 SUPFAM:SSF50494 eggNOG:COG5640 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 Gene3D:3.30.70.960 InterPro:IPR000082 Pfam:PF01390 SMART:SM00200 SUPFAM:SSF82671 PROSITE:PS50024 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 SUPFAM:SSF56487 MEROPS:S01.156 CTD:5651 HOGENOM:HOG000112380 HOVERGEN:HBG005588 KO:K01316 EMBL:D30799 PIR:A53663 RefSeq:NP_001001259.1 UniGene:Ssc.298 ProteinModelPortal:P98074 SMR:P98074 STRING:9823.ENSSSCP00000012801 GeneID:397152 KEGG:ssc:397152 Uniprot:P98074) HSP 1 Score: 46.9802 bits (110), Expect = 1.347e-4 Identity = 31/137 (22.63%), Postives = 62/137 (45.26%), Query Frame = 0 Query: 144 ACGRNTQNRPCDDGYVGTKIEDDIIIPWFAILVYSYTYKYSVKKPIYVRCGATILNQNWLISSVACFFQNGRKAVFGEMEAIMGTYVVDKIGIPTITTKIKDVVTI---------EESISLYKLEKPIQHYTSFMSP 271 +CG+ + VG + PW L Y+ + CGA++++++WL+S+ C + GR + +AI+G ++ + P I T++ D + I + I++ LE + +YT ++ P Sbjct: 786 SCGKKQVAQEVSPKIVGGNDSREGAWPWVVALYYNGQ----------LLCGASLVSRDWLVSAAHCVY--GRNLEPSKWKAILGLHMTSNLTSPQIVTRLIDEIVINPHYNRRRKDSDIAMMHLEFKV-NYTDYIQP 909
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592849258|gb|GAXK01108286.1| (TSA: Calanus finmarchicus comp771292_c0_seq1 transcribed RNA sequence) HSP 1 Score: 35.039 bits (79), Expect = 2.636e-1 Identity = 15/41 (36.59%), Postives = 25/41 (60.98%), Query Frame = 0 Query: 193 CGATILNQNWLISSVACFFQNGRKAVFGEMEA--IMGTYVV 231 CG +I+N W+++++ C +N A F E+E + TYVV Sbjct: 256 CGGSIINSKWIVTALHCVVKNISVATFDELEVYPVSDTYVV 378
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592858514|gb|GAXK01099048.1| (TSA: Calanus finmarchicus comp238145_c2_seq1 transcribed RNA sequence) HSP 1 Score: 35.039 bits (79), Expect = 3.338e-1 Identity = 34/117 (29.06%), Postives = 45/117 (38.46%), Query Frame = 0 Query: 49 CTLVE--MLFEQRPFLVFWTLINSIFFQVEVCYSENSQEIQTTNEDPCKTIKGVKCRFPA-IYGKTYYSCI-SSIDESKTWCYTDIEEN------WDFCDQTTCFACGRNTQNRPCD 155 C VE +LF V +I F + S E Q + C G C FP YG YYSCI D WC T+++ + W C+ + C C T + CD Sbjct: 37 CLFVE*YILFCVLNIFVSNKIIMICFILLAFLASSEGYEYQNGTQRSCAGTGGEHCVFPMDYYGTVYYSCIKEEGDWIDPWCATEVDSDGGYIGEWAECN-SECPVC-ETTNHHACD 381
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592849257|gb|GAXK01108287.1| (TSA: Calanus finmarchicus comp771292_c0_seq2 transcribed RNA sequence) HSP 1 Score: 34.6538 bits (78), Expect = 3.486e-1 Identity = 15/41 (36.59%), Postives = 25/41 (60.98%), Query Frame = 0 Query: 193 CGATILNQNWLISSVACFFQNGRKAVFGEMEA--IMGTYVV 231 CG +I+N W+++++ C +N A F E+E + TYVV Sbjct: 209 CGGSIINSKWIVTALHCVVKNISVATFDELEVYPVSDTYVV 331
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592897484|gb|GAXK01060891.1| (TSA: Calanus finmarchicus comp173616_c3_seq2 transcribed RNA sequence) HSP 1 Score: 34.2686 bits (77), Expect = 4.361e-1 Identity = 22/78 (28.21%), Postives = 35/78 (44.87%), Query Frame = 0 Query: 94 CKTIKGVKCRFP-AIYGKTYYSCISSIDESKTWCYTDIE---------ENWDFCDQTTCFACGRNTQNRPCDDGYVGT 161 C+T G C+FP ++ K Y SC D +K WC T ++ + W +C T++ P D+G+ T Sbjct: 89 CRTEAGTACQFPFSVASKVYTSCTMDYD-TKPWCSTKVDGDGNHISASDEWGYC-----------TEDCPSDEGFPAT 286
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592897485|gb|GAXK01060890.1| (TSA: Calanus finmarchicus comp173616_c3_seq1 transcribed RNA sequence) HSP 1 Score: 34.2686 bits (77), Expect = 4.389e-1 Identity = 22/78 (28.21%), Postives = 35/78 (44.87%), Query Frame = 0 Query: 94 CKTIKGVKCRFP-AIYGKTYYSCISSIDESKTWCYTDIE---------ENWDFCDQTTCFACGRNTQNRPCDDGYVGT 161 C+T G C+FP ++ K Y SC D +K WC T ++ + W +C T++ P D+G+ T Sbjct: 89 CRTEAGTACQFPFSVASKVYTSCTMDYD-TKPWCSTKVDGDGNHISASDEWGYC-----------TEDCPSDEGFPAT 286
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592853498|gb|GAXK01104046.1| (TSA: Calanus finmarchicus comp271928_c0_seq13 transcribed RNA sequence) HSP 1 Score: 34.6538 bits (78), Expect = 4.519e-1 Identity = 19/50 (38.00%), Postives = 26/50 (52.00%), Query Frame = 0 Query: 94 CKTIKGVKCRFPAIYGKTYYSCISSIDESKTWCYTDIE----ENWDFCDQ 139 C T +G +C FP IY T Y +S+D + WC T++ E W C Q Sbjct: 1039 CYTQEGNECVFPFIYKDTEYFNCTSVDVYQPWCATEMNGTRIEAWGLCLQ 1188
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592853497|gb|GAXK01104047.1| (TSA: Calanus finmarchicus comp271928_c0_seq14 transcribed RNA sequence) HSP 1 Score: 34.2686 bits (77), Expect = 4.552e-1 Identity = 19/50 (38.00%), Postives = 26/50 (52.00%), Query Frame = 0 Query: 94 CKTIKGVKCRFPAIYGKTYYSCISSIDESKTWCYTDIE----ENWDFCDQ 139 C T +G +C FP IY T Y +S+D + WC T++ E W C Q Sbjct: 525 CYTQEGNECVFPFIYKDTEYFNCTSVDVYQPWCATEMNGTRIEAWGLCLQ 674
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592853505|gb|GAXK01104039.1| (TSA: Calanus finmarchicus comp271928_c0_seq6 transcribed RNA sequence) HSP 1 Score: 34.6538 bits (78), Expect = 4.718e-1 Identity = 19/50 (38.00%), Postives = 26/50 (52.00%), Query Frame = 0 Query: 94 CKTIKGVKCRFPAIYGKTYYSCISSIDESKTWCYTDIE----ENWDFCDQ 139 C T +G +C FP IY T Y +S+D + WC T++ E W C Q Sbjct: 3641 CYTQEGNECVFPFIYKDTEYFNCTSVDVYQPWCATEMNGTRIEAWGLCLQ 3790
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592853504|gb|GAXK01104040.1| (TSA: Calanus finmarchicus comp271928_c0_seq7 transcribed RNA sequence) HSP 1 Score: 34.6538 bits (78), Expect = 4.839e-1 Identity = 19/50 (38.00%), Postives = 26/50 (52.00%), Query Frame = 0 Query: 94 CKTIKGVKCRFPAIYGKTYYSCISSIDESKTWCYTDIE----ENWDFCDQ 139 C T +G +C FP IY T Y +S+D + WC T++ E W C Q Sbjct: 3575 CYTQEGNECVFPFIYKDTEYFNCTSVDVYQPWCATEMNGTRIEAWGLCLQ 3724
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Match: gi|592774721|gb|GAXK01179847.1| (TSA: Calanus finmarchicus comp769489_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.8834 bits (76), Expect = 6.392e-1 Identity = 23/86 (26.74%), Postives = 36/86 (41.86%), Query Frame = 0 Query: 142 CFACGRNTQ----NRPCDDGYVGTKIEDDIII----------PWFAILXXXXXXXXXXXXPIYVRCGATILNQNWLISSVACFFQN 213 CF G NT+ +P D G K ++ I+ PW A + + I CG +I+N W+I++ C F+N Sbjct: 667 CFRKGGNTKPICVEKPVADCRCGMKKQNTRIVGGQDVDAGEYPWMAFIAFKNQTGD-----IVGMCGGSIINSKWIITARHCLFKN 909
BLAST of EMLSAG00000000511 vs. L. salmonis peptides
Match: EMLSAP00000000511 (pep:novel supercontig:LSalAtl2s:LSalAtl2s107:679593:681950:-1 gene:EMLSAG00000000511 transcript:EMLSAT00000000511 description:"maker-LSalAtl2s107-snap-gene-5.21") HSP 1 Score: 595.89 bits (1535), Expect = 0.000e+0 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0 Query: 1 MTYKTGTKVLQSQECDTSNSKYLCTNNTNNFPKNALIGGSLVMNINGHCTLVEMLFEQRPFLVFWTLINSIFFQVEVCYSENSQEIQTTNEDPCKTIKGVKCRFPAIYGKTYYSCISSIDESKTWCYTDIEENWDFCDQTTCFACGRNTQNRPCDDGYVGTKIEDDIIIPWFAILVYSYTYKYSVKKPIYVRCGATILNQNWLISSVACFFQNGRKAVFGEMEAIMGTYVVDKIGIPTITTKIKDVVTIEESISLYKLEKPIQHYTSFMSPSNSTSFDNFSSGFDEYN 288 MTYKTGTKVLQSQECDTSNSKYLCTNNTNNFPKNALIGGSLVMNINGHCTLVEMLFEQRPFLVFWTLINSIFFQVEVCYSENSQEIQTTNEDPCKTIKGVKCRFPAIYGKTYYSCISSIDESKTWCYTDIEENWDFCDQTTCFACGRNTQNRPCDDGYVGTKIEDDIIIPWFAILVYSYTYKYSVKKPIYVRCGATILNQNWLISSVACFFQNGRKAVFGEMEAIMGTYVVDKIGIPTITTKIKDVVTIEESISLYKLEKPIQHYTSFMSPSNSTSFDNFSSGFDEYN Sbjct: 1 MTYKTGTKVLQSQECDTSNSKYLCTNNTNNFPKNALIGGSLVMNINGHCTLVEMLFEQRPFLVFWTLINSIFFQVEVCYSENSQEIQTTNEDPCKTIKGVKCRFPAIYGKTYYSCISSIDESKTWCYTDIEENWDFCDQTTCFACGRNTQNRPCDDGYVGTKIEDDIIIPWFAILVYSYTYKYSVKKPIYVRCGATILNQNWLISSVACFFQNGRKAVFGEMEAIMGTYVVDKIGIPTITTKIKDVVTIEESISLYKLEKPIQHYTSFMSPSNSTSFDNFSSGFDEYN 288 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000511 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 2
BLAST of EMLSAG00000000511 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000000511 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000511 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000511 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000511 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000511 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s107:679593..681950- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000511-683277 ID=EMLSAG00000000511-683277|Name=EMLSAG00000000511|organism=Lepeophtheirus salmonis|type=gene|length=2358bp|location=Sequence derived from alignment at LSalAtl2s107:679593..681950- (Lepeophtheirus salmonis)back to top Add to Basket
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